Integrative development of multidisciplinary neuroinformatics platforms in Japan Node
Yoko
Yamaguchi1*,
Yoshihiro
Okumura1,
Yui
Isono1,
Sawako
Suenaga1,
Itsuko
Ishii1,
Ayumi
Honda1,
Takayuki
Kannon1,
Hideki
Oka1,
Alexander
Woodward1,
Yoko
Morii1,
Masahide
Maeda1,
Tsutomu
Hashikawa1 and
Shiro
Usui1, 2
-
1
RIKEN Brain Science Institute, Neuroinformatics Japan Center, Japan
-
2
Toyohashi University of Technology, EIIRIS, Japan
INCF Japan Node (J-Node) has developed 13 neuroinformatics platforms on topics of vision science, BMI, invertebrate brain, cerebellum function, neuro-imaging, cerebellar transcription, dynamical brain, comprehensive brain science, mouse phenotype, on-line simulation, brain science dictionary, transcriptome brain tomography and RIKEN BSI data and tool.
In order to develop neuroinformatics beyond individual fields, J-Node is developing across platform activities. As one new platform, OpenNeuro is under construction to provide data repository for general users. Research data in any field/topics submitted to OpenNeuro is to be reviewed for open-in-public use by existing platform committees in various fields and then can be released from multiple platforms for various usage in various fields. In addition we have developed J-Node software center for software development and software catalogue in connection with various neuroinformatics platforms. As a next step for interdisciplinary data sharing, we will start across-species brain atlas project in collaboration with platform committee related with invertebrate, rodents and primate atlases. Based on the unified platform structure, J-Node looks forward to extending international collaboration of neuroscience as data science.
Acknowledgements
Authors acknowledge all J-Node platform committee members for their contribution to development of neuroinformatics platforms.
Keywords:
platforms,
software center,
Brain Atlas,
data repository,
multidisciplinary approach
Conference:
Neuroinformatics 2015, Cairns, Australia, 20 Aug - 22 Aug, 2015.
Presentation Type:
Demo, not to be considered for oral presentation
Topic:
General neuroinformatics
Citation:
Yamaguchi
Y,
Okumura
Y,
Isono
Y,
Suenaga
S,
Ishii
I,
Honda
A,
Kannon
T,
Oka
H,
Woodward
A,
Morii
Y,
Maeda
M,
Hashikawa
T and
Usui
S
(2015). Integrative development of multidisciplinary neuroinformatics platforms in Japan Node.
Front. Neurosci.
Conference Abstract:
Neuroinformatics 2015.
doi: 10.3389/conf.fnins.2015.91.00041
Copyright:
The abstracts in this collection have not been subject to any Frontiers peer review or checks, and are not endorsed by Frontiers.
They are made available through the Frontiers publishing platform as a service to conference organizers and presenters.
The copyright in the individual abstracts is owned by the author of each abstract or his/her employer unless otherwise stated.
Each abstract, as well as the collection of abstracts, are published under a Creative Commons CC-BY 4.0 (attribution) licence (https://creativecommons.org/licenses/by/4.0/) and may thus be reproduced, translated, adapted and be the subject of derivative works provided the authors and Frontiers are attributed.
For Frontiers’ terms and conditions please see https://www.frontiersin.org/legal/terms-and-conditions.
Received:
07 Apr 2015;
Published Online:
05 Aug 2015.
*
Correspondence:
Dr. Yoko Yamaguchi, RIKEN Brain Science Institute, Neuroinformatics Japan Center, Wako-shi, Saitama, 351-0198, Japan, yokoy@brain.riken.jp