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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Bioeng. Biotechnol.</journal-id>
<journal-title>Frontiers in Bioengineering and Biotechnology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Bioeng. Biotechnol.</abbrev-journal-title>
<issn pub-type="epub">2296-4185</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">988607</article-id>
<article-id pub-id-type="doi">10.3389/fbioe.2022.988607</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Bioengineering and Biotechnology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Biosynthesized silver nanoparticles using <italic>Polygonatum geminiflorum</italic> efficiently control fusarium wilt disease of tomato</article-title>
<alt-title alt-title-type="left-running-head">Ahmad et al.</alt-title>
<alt-title alt-title-type="right-running-head">
<ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fbioe.2022.988607">10.3389/fbioe.2022.988607</ext-link>
</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Ahmad</surname>
<given-names>Maaz</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1917858/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ali</surname>
<given-names>Ahmad</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1788038/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ullah</surname>
<given-names>Zahid</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1855916/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Sher</surname>
<given-names>Hassan</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Dai</surname>
<given-names>Dong-Qin</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1087978/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Ali</surname>
<given-names>Mohammad</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1586066/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Iqbal</surname>
<given-names>Javed</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/417266/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Zahoor</surname>
<given-names>Muhammad</given-names>
</name>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Ali</surname>
<given-names>Iftikhar</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff6">
<sup>6</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/428172/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Center for Yunnan Plateau Biological Resources Protection and Utilization</institution>, <institution>Yunnan Engineering Research Center of Fruit Wine</institution>, <institution>College of Biological Resource and Food Engineering</institution>, <institution>Qujing Normal University</institution>, <addr-line>Qujing</addr-line>, <addr-line>Yunnan</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Centre for Plant Sciences and Biodiversity</institution>, <institution>University of Swat</institution>, <addr-line>Charbagh</addr-line>, <addr-line>Swat</addr-line>, <country>Pakistan</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Centre for Biotechnology and Microbiology</institution>, <institution>University of Swat</institution>, <addr-line>Charbagh</addr-line>, <addr-line>Swat</addr-line>, <country>Pakistan</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Department of Botany</institution>, <institution>Bacha Khan University</institution>, <addr-line>Charsadda</addr-line>, <addr-line>Khyber Pakhtunkhwa</addr-line>, <country>Pakistan</country>
</aff>
<aff id="aff5">
<sup>5</sup>
<institution>Department of Biochemistry</institution>, <institution>University of Malakand</institution>, <addr-line>Chakdara</addr-line>, <addr-line>Khyber Pakhtunkhwa</addr-line>, <country>Pakistan</country>
</aff>
<aff id="aff6">
<sup>6</sup>
<institution>State Key Laboratory of Molecular Developmental Biology</institution>, <institution>Institute of Genetics and Developmental Biology</institution>, <institution>Chinese Academy of Sciences</institution>, <addr-line>Beijing</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/809285/overview">Rabia Javed</ext-link>, Quaid-i-Azam University, Pakistan</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/399986/overview">Murali M</ext-link>, University of Mysore, India</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1026084/overview">Fazal Ullah</ext-link>, Chengdu Institute of Biology (CAS), China</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Iftikhar Ali, <email>iftikhar@genetics.ac.cn</email>; Dong-Qin Dai, <email>cicidaidongqin@gmail.com</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Nanobiotechnology, a section of the journal Frontiers in Bioengineering and Biotechnology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>08</day>
<month>09</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>10</volume>
<elocation-id>988607</elocation-id>
<history>
<date date-type="received">
<day>07</day>
<month>07</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>22</day>
<month>08</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2022 Ahmad, Ali, Ullah, Sher, Dai, Ali, Iqbal, Zahoor and Ali.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Ahmad, Ali, Ullah, Sher, Dai, Ali, Iqbal, Zahoor and Ali</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Nanomaterials are gaining tremendous potential as emerging antimicrobials in the quest to find resistance-free alternatives of chemical pesticides. In this study, stable silver nanoparticles were synthesized using the aqueous extract of medicinal plant species <italic>Polygonatum geminiflorum</italic>
<bold>,</bold> and their morphological features were evaluated by transmission electron microscopy, X-ray diffraction spectroscopy and energy dispersive X-ray analysis. <italic>In vitro</italic> Antifungal activity of the synthesized silver nanoparticles (AgNPs) and <italic>P. geminiflorum</italic> extract (PE) either alone or in combination (PE-AgNPs) against <italic>Fusarium oxysporum</italic> was evaluated using disc-diffusion and well-diffusion methods. <italic>In planta</italic> assay of the same treatments against <italic>Fusarium</italic> wilt diseases of tomato was evaluated by foliar spray method. Moreover, plant extract was evaluated for the quantitative investigation of antioxidant activity, phenolics and flavonoids by spectroscopic and HPLC techniques. Phytochemical analysis indicated the presence of total phenolic and flavonoid contents as 48.32&#xa0;mg &#xb1; 1.54&#xa0;mg GAE/g and 57.08&#xa0;mg &#xb1; 1.36&#xa0;mg QE/g, respectively. The DPPH radical scavenging of leaf extract was found to be 88.23% &#xb1; 0.87%. Besides, the HPLC phenolic profile showed the presence of 15 bioactive phenolic compounds. Characterization of nanoparticles revealed the size ranging from 8&#xa0;nm to 34&#xa0;nm with average crystallite size of 27&#xa0;nm. The FTIR analysis revealed important functional groups that were responsible for the reduction and stabilization of AgNPs. In the <italic>in vitro</italic> assays, 100&#xa0;&#x3bc;g/ml of AgNPs and AgNPs-PE strongly inhibited <italic>Fusarium oxysporum</italic>. The same treatments tested against <italic>Fusarium</italic> sprayed on tomato plants in controlled environment exhibited nearly 100% plant survival with no observable phytotoxicity. These finding provide a simple baseline to control <italic>Fusarium</italic> wilt using silver nano bio-control agents without affecting the crop health.</p>
</abstract>
<kwd-group>
<kwd>silver nanoparticles</kwd>
<kwd>antioxidants</kwd>
<kwd>phenolics</kwd>
<kwd>flavonoids</kwd>
<kwd>fusarium wilt</kwd>
<kwd>tomato</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>All over the world, agricultural crops are severely affected by phytopathogenic microbes which cause a variety of diseases and lead to reduction in their overall productivity (<xref ref-type="bibr" rid="B67">Savary et al., 2012</xref>; <xref ref-type="bibr" rid="B60">Rafique et al., 2017</xref>; <xref ref-type="bibr" rid="B66">Saratale et al., 2018</xref>). Disruption of the productivity of important crops due to pathogenic diseases is a serious threat to the global food security (<xref ref-type="bibr" rid="B67">Savary et al., 2012</xref>). Different fungi, bacteria and viruses produce toxic substances that are harmful to the health of beneficial life forms, thereby compromising the quality and quantity of crops (<xref ref-type="bibr" rid="B13">Bashir et al., 2018</xref>; <xref ref-type="bibr" rid="B23">Gao et al., 2018</xref>). Conventionally, synthetic chemicals have been used to control these pathogenic diseases; however, their frequent administration is hazardous for non-targeted organisms (<xref ref-type="bibr" rid="B24">Gardener and Fravel, 2002</xref>; <xref ref-type="bibr" rid="B30">Hajek and Eilenberg, 2018</xref>). Therefore, the introduction of novel and targeted treatments is needed as a safer and alternative strategy to control plant pathogens (<xref ref-type="bibr" rid="B47">Leon-Buitimea et al., 2020</xref>; <xref ref-type="bibr" rid="B12">Avila-Quezada et al., 2021</xref>).</p>
<p>The field of nanotechnology, ensuing from the coupling of material science and biotechnology, is focused to develop novel agents for the effective control of phytopathogens (<xref ref-type="bibr" rid="B90">Zhang and Webster, 2009</xref>; <xref ref-type="bibr" rid="B68">Saxena et al., 2012</xref>). Nanoparticles have tremendous importance due to their various applications in the fields like medicine, biology, chemistry, material science and physics (<xref ref-type="bibr" rid="B6">Albrecht et al., 2006</xref>; <xref ref-type="bibr" rid="B81">Thiruvengadam et al., 2006</xref>). Chemical and physical methods used for the synthesis of nanoparticles are costly and produce substances that are toxic to the health of living organisms (<xref ref-type="bibr" rid="B86">Yaqoob et al., 202</xref>). In contrast, biological synthesis is a simple and viable method that utilizes plants, microorganisms, polysaccharides and enzymes as synthesis substrates (<xref ref-type="bibr" rid="B33">Hebbalalu et al., 2013</xref>; <xref ref-type="bibr" rid="B42">Khan et al., 2022</xref>).</p>
<p>As nano factories, green plants provide relatively modest, environment-friendly and a faster way for nanoparticles synthesis on large scale (<xref ref-type="bibr" rid="B1">Abou El-Nour et al., 2010</xref>). Plant secondary products act as reducing and stabilizing agents to transform metal salts into stable nanoparticles (<xref ref-type="bibr" rid="B46">Kuppusamy et al., 2016</xref>). At low concentrations, green synthesized silver nanoparticles have documented antimicrobial activities against plant and human pathogens with no cytotoxicity (<xref ref-type="bibr" rid="B35">Jeong et al., 2005</xref>; <xref ref-type="bibr" rid="B71">Sharma et al., 2009</xref>; <xref ref-type="bibr" rid="B4">Alam et al., 2018</xref>).</p>
<p>
<italic>Polygonatum Mill</italic> is a genus of rhizomatous, perennial, monocot herbs in the family Asparagaceae. The genus is represented by about 75 species in the world, distributed primarily in the temperate and alpine regions of the northern hemisphere, extending into mountains in the subtropical region as well (<xref ref-type="bibr" rid="B17">Chase et al., 2016</xref>; <xref ref-type="bibr" rid="B22">Floden and Schilling, 2018</xref>). <italic>Polygonatum</italic> species are characterized by sympodial rhizomes, and opposite to verticillate leaves and fleshy berries (<xref ref-type="bibr" rid="B84">Wang et al., 2022</xref>). The subterranean rhizome in many species of the genus have been utilized in traditional as well as modern medicine for the cure of several diseases. <italic>Polygonatum</italic> species are used as antidiabetic, as coolant, immunostimulatory, to treat respiratory problems (<xref ref-type="bibr" rid="B37">Jiao et al., 2018</xref>). Some species (<italic>P. cyrtonema, P. sibiricum</italic>) are also listed in Chinese Pharmacopoea. Recently it has been found that some species of <italic>Polygonatum</italic> are rich in proteins and nutrients and can become potential future grain crop (<xref ref-type="bibr" rid="B72">Si and Zhu, 2021</xref>. The genus <italic>Polygonatum</italic> includes important medicinal plants which are utilized for treating several human ailments such as diabetes, vertigo, ringworm and pulmonary problems, and exhibit hepatoprotective and antioxidant activities (<xref ref-type="bibr" rid="B76">Son et al., 1990</xref>; <xref ref-type="bibr" rid="B91">Zhao et al., 2018</xref>). Moreover, the wide use of <italic>Polygonatum</italic> species in various traditional systems of medicines as antidiabetic, aphrodisiac, antituberculant, tonic, diuretic etc., has previously been reported (<xref ref-type="bibr" rid="B40">Khan et al., 2013</xref>; <xref ref-type="bibr" rid="B79">Suyal et al., 2020</xref>; <xref ref-type="bibr" rid="B70">Sharma et al., 2021</xref>).</p>
<p>
<italic>P. geminiflorum Decne</italic>. locally known as &#x201c;Peramole&#x201d; (Pashto), is an important rhizomatous perennial herb inhabiting temperate coniferous forests, and alpine zone in northern Pakistan&#x2019;s Western Himalayan and Hindukush Mountain region, extending westward to Afghanistan (<xref ref-type="bibr" rid="B17">Chase et al., 2016</xref>)<italic>.</italic> This species is closely related to P. verticillatum and is known to people by the same vernacular names &#x201c;Noore-Alam and Peramole&#x201d;. The rhizome of <italic>P. geminiflorum</italic> as well as <italic>P. verticillatum</italic> is crushed and fried in wheat flour and given to lactating mothers for increasing milk (<xref ref-type="bibr" rid="B61">Rahman et al., 2022</xref>)<italic>.</italic> <xref ref-type="bibr" rid="B43">Khan and Khatoon, (2008)</xref> have reported that the local people in northern Pakistan use <italic>P. geminiflorum</italic> for the treatment of uterine tumor, menstrual abnormalities, gout, and skin diseases. Moreover, <xref ref-type="bibr" rid="B39">Khan and Rauf, (2015)</xref> have comprehensively described the phytochemical constituents of different species in the genus, and the associated antimibacterial, antifungal and antioxidant activities. This study has also reported that <italic>P. geminiflorum</italic> is rich in phenolics, saponins, alkaloides and phytoharmones, and therefore is a high value medicinal plant, like the most commonly explored <italic>P. vericillatum.</italic> Till date, no published report is available on the synthesis of AgNPs using <italic>P. geminiflorum</italic>. Therefore, the present study was aimed to synthesize biologically stable silver nanoparticles using aqueous extract from <italic>P. geminiflorum</italic> and to test the synthesized nanoparticles against Fusarium wilt disease of tomato <italic>in vitro</italic> and in planta.</p>
</sec>
<sec sec-type="materials|methods" id="s2">
<title>Materials and methods</title>
<sec id="s2-1">
<title>Extract preparation for phytochemical analysis</title>
<p>For phytochemical analysis, methanolic extract was prepared by dissolving 50&#xa0;g shade-dried powdered leaves of <italic>P. geminiflorum</italic> in 100&#xa0;ml methanol (95%), followed by incubation at 28&#xb0;C for 24&#xa0;h. After incubation the solution was filtered, evaporated and 15&#xa0;g final mass of crude extract was obtained which was then used for different phytochemicals tests.</p>
</sec>
<sec id="s2-2">
<title>Phenolics, flavonoids and DPPH antioxidant activity</title>
<p>TPC was determined according to the Folin-Ciocalteu&#x2019;s colorimetric method as discussed by <xref ref-type="bibr" rid="B74">Singleton and Rossi, (1965)</xref> using calibration curve of standard gallic acid. Briefly, 5&#xa0;mg of crude extract was added to dH<sub>2</sub>O (10&#xa0;ml), and the solution was heated in a water bath for 30&#xa0;min and then filtered into a vial. About 600&#xa0;&#xb5;l of the filtrate was taken and mixed with 100&#xa0;&#xb5;l of Folin-Ciocalteu&#x2019;s reagent, followed by addition of Na<sub>2</sub>CO<sub>3</sub> (sodium carbonate, 7%). The mixture was kept at room temperature for 90&#xa0;min in dark. After the reaction mixture turned blue, the absorbance was recorded at 760&#xa0;nm.</p>
<p>TFC determination was carried out by Aluminum chloride (AlCl<sub>3)</sub> colorimetric method as described in <xref ref-type="bibr" rid="B16">Chang et al. (2002)</xref> using standard quercetin curve. Approximately 5&#xa0;mg of crude extract was added to dH<sub>2</sub>O (10&#xa0;ml), the solution was heated in a water bath for 30&#xa0;min, filtered and five different dilutions (62.5&#xa0;&#x3bc;g/ml, 125&#xa0;&#x3bc;g/ml, 250&#xa0;&#x3bc;g/ml, 500&#xa0;&#x3bc;g/ml and 1,000&#xa0;&#x3bc;g/ml) were prepared. From each dilution, 100&#xa0;&#xb5;l of extract was thoroughly mixed with 500&#xa0;&#xb5;l dH<sub>2</sub>O and 100&#xa0;&#xb5;l of NaNO<sub>3</sub> (5%), 150&#xa0;&#xb5;l of AlCl<sub>3</sub> (10%) and 200&#xa0;&#xb5;l of sodium hydroxide (1&#xa0;M). The absorbance of reaction mixtures was recorded at 510&#xa0;nm by using UV-VIS double beam spectrophotometer.</p>
<p>The antioxidant assay was determined as DPPH radical scavenging by following the method of <xref ref-type="bibr" rid="B28">Goyal et al. (2010)</xref> using standard ascorbic acid.</p>
</sec>
<sec id="s2-3">
<title>HPLC&#x2013;UV analysis for determination of phenolics</title>
<p>Determination of the phenolics in leaf extract was accomplished using HPLC Agilent 1,260 system equipped with UV detector, following <xref ref-type="bibr" rid="B88">Zeb, (2015)</xref> with minor modifications. Approximately, 1&#xa0;g dried sample was mixed with 50% methanol (v/v; 20&#xa0;ml) and the solution was placed in hot water bath at 50<sup>&#xb0;</sup>C for 1&#xa0;h. The solution was filtered 2 times and poured into HPLC vials for the detection of phenolic compounds. For the separation of components, ZORBAX Eclipse C18 (4.6&#xa0;mm &#xd7; 250&#xa0;mm, 5 Micron) column was used and the identification of compounds was carried out by the comparison of retention times with available standards and those reported in literature.</p>
</sec>
<sec id="s2-4">
<title>Biosynthesis of silver nanoparticles</title>
<p>The biosynthesis of silver nanoparticles from <italic>P. geminiflorum</italic> leaf extract was carried out using the protocols of <xref ref-type="bibr" rid="B8">Ali et al. (2016)</xref>. Briefly, plant aqueous leaf extract (20&#xa0;mg/ml) was prepared by heating 2&#xa0;g shade-dried and powdered leaves of <italic>P. geminiflorum</italic> in 100&#xa0;ml distilled water until boiled. The prepared extract was cooled down at room temperature and filtered three times using Whatman No. 1 filter paper. Distilled water was added to adjust the final volume as 100&#xa0;ml. The stock extract was then diluted to 5&#xa0;mg/ml by adding distilled water. The extract was stored at 4&#xb0;C until used for nanoparticles synthesis.</p>
<p>For silver nanoparticles synthesis, 5&#xa0;ml of the plant aqueous extract (5&#xa0;mg/ml) was mixed with 5&#xa0;ml of AgNO<sub>3</sub> (4&#xa0;mM) solution in a test tube. The reaction mixture was exposed to sunlight for 15&#xa0;min and the color change was monitored following the reaction of both reactants. The mixture was incubated at room temperature and spectral readings were recorded at various time points until consistency in surface plasmon resonance was achieved after 48&#xa0;h. The synthesized AgNPs were purified by following the protocol of <xref ref-type="bibr" rid="B11">Arif et al. (2022)</xref>. Briefly, the samples were centrifuged at 15,000&#xa0;rpm, the supernatants were discarded, and the pellets were dissolved in deionized distilled water by using ultrasonic sonicator. The process of centrifugation and washing was repeated three times until purified AgNPs were obtained. The purified nanoparticles were kept at room temperature for drying which were later subjected to various characterization techniques. To prepare plant extract-encapsulated silver nanoparticles (AgNPs-PE), appropriate volumes of 5&#xa0;mg/L plant extract was added to dried AgNPs in falcon tubes (15&#xa0;ml).</p>
</sec>
<sec id="s2-5">
<title>Characterization of AgNPs</title>
<p>Characterization of the synthesized AgNPs was accomplished using different physical techniques, as has been previously reported (<xref ref-type="bibr" rid="B27">Gopinath and Velusamy, 2013</xref>; <xref ref-type="bibr" rid="B8">Ali et al., 2016</xref>).</p>
<p>The UV-visible spectral analysis was recorded to find out the characteristic peak for silver nanoparticles. The spectral range of 300&#xa0;nm&#x2013;600&#xa0;nm was used to monitor the surface plasmon resonance. For this purpose, the Multiskan&#x2122; Sky Microplate Spectrophotometer (MAN0018930) was used.</p>
<p>The FTIR characterization were performed using Thermo-Nicolet 6,700 FTIR Spectrometer (Madison, WI, United States) with spectrum ranging from 4,000&#xa0;cm<sup>&#x2212;1</sup> to 400&#xa0;cm<sup>&#x2212;1</sup>. The functional groups were detected using Ge crystal in ATR reflection mode. The functional groups responsible for the formation of stable nanoparticles were identified by comparing observed FTIR peaks with IR spectrum table.</p>
<p>The TEM analysis of the biosynthesized AgNPs were performed on JEOL JEM-101 system. Different magnification lens was employed for exploration of the shape, size and morphology of prepared AgNPs. Further, SAED (selected area electron diffraction) determined the crystalline nature of AgNPs.</p>
<p>For EDX study, scanning electron microscope (JSM5910, JEOL, Japan) equipped with energy dispersive x-ray system was used. The EDX characterization determined the elemental composition for the synthesized silver nanoparticles.</p>
<p>The XRD analysis of biosynthesized AgNPs were performed through JDX-3432, JEOL, Japan. The average crystallite size for the prepared nanoparticles were calculated using Debye&#x2013;Scherrer equation which is assessed by:<disp-formula id="equ1">
<mml:math id="m1">
<mml:mrow>
<mml:mi mathvariant="normal">D</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mrow>
<mml:mrow>
<mml:mi mathvariant="normal">K</mml:mi>
<mml:mi mathvariant="normal">&#x3bb;</mml:mi>
</mml:mrow>
<mml:mo>/</mml:mo>
<mml:mrow>
<mml:mi mathvariant="normal">&#x3b2;.</mml:mi>
<mml:mi mathvariant="normal">cos</mml:mi>
<mml:mo>&#x3b8;</mml:mo>
</mml:mrow>
</mml:mrow>
</mml:mrow>
</mml:math>
</disp-formula>
</p>
</sec>
</sec>
<sec id="s3">
<title>Antimicrobial activities</title>
<sec id="s3-1">
<title>
<italic>In vitro</italic> inhibition assay of <italic>Fusarium oxysporum</italic>
</title>
<p>The <italic>in vitro</italic> antifungal activity of AgNPs was performed against <italic>F. oxysporum</italic> using well-diffusion and disc-diffusion methods following <xref ref-type="bibr" rid="B27">Gopinath and Velusamy, (2013)</xref>, with certain modifications. Briefly, the confirmed fungal strain <italic>F. oxysporum</italic> was taken from the plant pathogens facility at the Centre for Plant Sciences and Biodiversity, University of Swat, Pakistan. The strain was cultured and maintained on PDA plates. For well diffusion, four wells of equal size were made on PDA plates and each well was loaded with 100&#xa0;&#xb5;l of either AgNPs (100&#xa0;&#x3bc;g/ml), plant extract (5&#xa0;mg/ml) or AgNPs-PE (100&#xa0;&#x3bc;g/ml). The same volume of distilled water was taken as control. The cultures were incubated at 28&#xb0;C and the zone of inhibition (mm) around the wells was recorded after 4&#xa0;days of culture. Similarly, disc-diffusion method was carried out by employing the same treatments and concentrations as for well-diffusion method. The <italic>F. oxysporum</italic> was cultured and four discs (each poured with 20&#xa0;&#xb5;l solution) were placed on PDA plate. The inhibition zone was measured after incubation at 28&#xb0;C for 4&#xa0;days (<xref ref-type="table" rid="T1">Table 1</xref>).</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Zone of inhibition (in millimeter) of <italic>F. oxysporum</italic> in disc and well diffusion method.</p>
</caption>
<table>
<thead>
<tr>
<td align="left">Zone of inhibition in millimeter (mm)</td>
<td align="left">Method</td>
<td align="left">Ag NPs (100&#xa0;&#x3bc;g/ml)</td>
<td align="left">Plant extract (5&#xa0;mg/ml)</td>
<td align="left">Plant coated Ag NPs (100&#xa0;&#x3bc;g/ml)</td>
<td align="left">Control</td>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left"/>
<td align="left">Well diffusion</td>
<td align="left">11 <inline-formula id="inf1">
<mml:math id="m2">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1</td>
<td align="left">5 <inline-formula id="inf2">
<mml:math id="m3">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1</td>
<td align="left">18 <inline-formula id="inf3">
<mml:math id="m4">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1</td>
<td align="left">No Inhibition</td>
</tr>
<tr>
<td align="left"/>
<td align="left">Disc diffusion</td>
<td align="left">9 <inline-formula id="inf4">
<mml:math id="m5">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1</td>
<td align="left">3 <inline-formula id="inf5">
<mml:math id="m6">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1</td>
<td align="left">14 <inline-formula id="inf6">
<mml:math id="m7">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1</td>
<td align="left">No Inhibition</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s3-2">
<title>
<italic>In planta Fusarium oxysporum</italic> inhibition assay</title>
<p>The <italic>in planta</italic> experiment against <italic>F. oxysporum</italic> was performed following the protocol of <xref ref-type="bibr" rid="B9">Ali et al. (2015)</xref> with some modifications. Briefly, the culture of <italic>F. ozysporum</italic> were grown overnight in potato dextrose broth (PDB) and a final concentration of 1.5 &#xd7; 10<sup>4</sup> conidia ml<sup>&#x2212;1</sup> was adjusted. Further, the seeds of <italic>Solanum lycopersicon</italic> were sown in a greenhouse upheld at 24&#xb0;C &#xb1; 5&#xb0;C and a photoperiod of 14-h day/10-h night. The 18&#xa0;days old seedlings were transferred to pots and kept under the same temperature and photoperiod. After 10&#xa0;days, the plants were sprayed until excess with AgNPs (100&#xa0;&#x3bc;g/ml), plant extract (5&#xa0;mg/ml) and AgNPs-PE (100&#xa0;&#x3bc;g/ml). Commercial fungicide (bromuconazole 100&#xa0;&#x3bc;g/ml) was taken as positive control and water as negative control. Each treatment was replicated three times and each replication was consisted of nine plants placed in plastic pots. After 24&#xa0;h, each treated plant was drenched with 30&#xa0;ml of <italic>F. oxysporum</italic> (concentration of 1.5 &#xd7; 10<sup>4</sup> conidia ml<sup>&#x2212;1</sup>) PDB culture. After inoculation the treated plants were observed for one week and the disease spontaneity or inhibition was recorded in terms of percent plant survival. The obtained data was statistically analyzed using student&#x2019;s t test to find out the significance of difference between the treatments for the percent healthy plants.</p>
</sec>
</sec>
<sec sec-type="results" id="s4">
<title>Results</title>
<sec id="s4-1">
<title>Phytochemical analysis</title>
<p>Total phenolic content of the aqueous and methanolic extract of <italic>P. geminiflorum</italic> is given in <xref ref-type="table" rid="T2">Table 2</xref>, which was estimated using the regression equation of standard gallic acid. The TPC for both extracts were found 42.27&#xa0;mg &#xb1; 1.73&#xa0;mg and 48.29&#xa0;mg &#xb1; 1.54&#xa0;mg GAE/g, respectively. Regarding, total flavonoid contents, the highest TFC was found in the dilution of 1,000&#xa0;&#x3bc;g/ml that is presented in <xref ref-type="fig" rid="F1">Figure 1</xref>. Further, results regarding DPPH free radical scavenging capability of <italic>P. geminiflorum</italic> methanolic leaf extract revealed the highest scavenging percent for the concentration of 1,000&#xa0;&#x3bc;g/ml. The obtained results were compared with standard ascorbic acid and the data of DPPH assay is presented in <xref ref-type="fig" rid="F1">Figure 1</xref>. The HPLC analysis revealed fifteen bioactive phenolic compounds in the leaf extract of <italic>P. geminiflorum</italic> (<xref ref-type="fig" rid="F2">Figure 2</xref>). The most prominent possible compounds identified were P-coumaric acid derivative, ellagic acid, p-hydroxy benzoic acid, Vanillic acid, rutin and quercetin-3-malonylglucoside (<xref ref-type="fig" rid="F2">Figure 2</xref>; <xref ref-type="table" rid="T3">Table 3</xref>).</p>
<table-wrap id="T2" position="float">
<label>TABLE 2</label>
<caption>
<p>The total phenolic content in <italic>P. geminiflorum</italic> methanolic and leaf extract.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">S. No.</th>
<th align="left">Extract sample</th>
<th align="left">TPC (mg GAE/g). Mean &#xb1; S.E.M</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">1</td>
<td align="left">Aqueous</td>
<td align="left">42.27 &#xb1; 1.73</td>
</tr>
<tr>
<td align="left">2</td>
<td align="left">Methanolic</td>
<td align="left">48.29 &#xb1; 1.54</td>
</tr>
</tbody>
</table>
</table-wrap>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Total flavonoid content and DPPH free radical scavenging capability of <italic>P. geminiflorum</italic>.</p>
</caption>
<graphic xlink:href="fbioe-10-988607-g001.tif"/>
</fig>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>HPLC chromatogram representing phenolic profile of the leaf extract of <italic>P. geminiflorum</italic>.</p>
</caption>
<graphic xlink:href="fbioe-10-988607-g002.tif"/>
</fig>
<table-wrap id="T3" position="float">
<label>TABLE 3</label>
<caption>
<p>Phenolic compounds identified in HPLC profiling of <italic>P. geminiflorum</italic> leaf extract.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Peak area (mAU&#x2a;s)</th>
<th align="left">Retention time (min)</th>
<th align="left">Width (min)</th>
<th align="left">Height (mAU)</th>
<th align="left">Peak area (%)</th>
<th align="left">Proposed identity of compound</th>
<th align="left">Identification reference</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">18.227</td>
<td align="left">31.088</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">Mandelic acid</td>
<td align="left">Standard</td>
</tr>
<tr>
<td align="left">24.333</td>
<td align="left">29.849</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">Caffeic acid</td>
<td align="left">Standard</td>
</tr>
<tr>
<td align="left">34.914</td>
<td align="left">13.077</td>
<td align="left">0.233</td>
<td align="left">2.224</td>
<td align="left">0.907</td>
<td align="left">Isovitexin-4-o-glucoside</td>
<td align="left">
<xref ref-type="bibr" rid="B56">Ovais et al. (2018)</xref>
</td>
</tr>
<tr>
<td align="left">36.403</td>
<td align="left">20.266</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">Catechin hydrate</td>
<td align="left">Standard</td>
</tr>
<tr>
<td align="left">43.033</td>
<td align="left">9.465</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">Quercetin</td>
<td align="left">Standard</td>
</tr>
<tr>
<td align="left">52.137</td>
<td align="left">12.468</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">Morin</td>
<td align="left">Standard</td>
</tr>
<tr>
<td align="left">70.043</td>
<td align="left">35.726</td>
<td align="left">0.156</td>
<td align="left">6.526</td>
<td align="left">1.819</td>
<td align="left">Kaempferol-3-O-sophorotrioside-7-glucoside</td>
<td align="left">
<xref ref-type="bibr" rid="B49">Litchfield and Wilcoxon (1949)</xref>
</td>
</tr>
<tr>
<td align="left">105.330</td>
<td align="left">18.875</td>
<td align="left">0.138</td>
<td align="left">11.560</td>
<td align="left">2.736</td>
<td align="left">Apigenin-7-o-rutinoside</td>
<td align="left">
<xref ref-type="bibr" rid="B56">Ovais et al. (2018)</xref>
</td>
</tr>
<tr>
<td align="left">128.141</td>
<td align="left">15.808</td>
<td align="left">0.166</td>
<td align="left">11.796</td>
<td align="left">3.323</td>
<td align="left">Hydroxy benzoic acid derivative</td>
<td align="left">
<xref ref-type="bibr" rid="B56">Ovais et al. (2018)</xref>
</td>
</tr>
<tr>
<td align="left">130.796</td>
<td align="left">34.171</td>
<td align="left">0.134</td>
<td align="left">14.021</td>
<td align="left">3.397</td>
<td align="left">Quercetin-3-malonylglucoside</td>
<td align="left">
<xref ref-type="bibr" rid="B49">Litchfield and Wilcoxon (1949)</xref>
</td>
</tr>
<tr>
<td align="left">138.683</td>
<td align="left">22.027</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">Rutin</td>
<td align="left">Standard</td>
</tr>
<tr>
<td align="left">203.439</td>
<td align="left">20.689</td>
<td align="left">0.212</td>
<td align="left">14.378</td>
<td align="left">5.283</td>
<td align="left">Vanillic acid</td>
<td align="left">
<xref ref-type="bibr" rid="B56">Ovais et al. (2018)</xref>
</td>
</tr>
<tr>
<td align="left">221.364</td>
<td align="left">16.633</td>
<td align="left">0.150</td>
<td align="left">21.953</td>
<td align="left">5.749</td>
<td align="left">p-hydroxy benzoic acid</td>
<td align="left">
<xref ref-type="bibr" rid="B56">Ovais et al. (2018)</xref>
</td>
</tr>
<tr>
<td align="left">568.275</td>
<td align="left">16.201</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">&#x2013;</td>
<td align="left">Ellagic acid</td>
<td align="left">Standard</td>
</tr>
<tr>
<td align="left">828.884</td>
<td align="left">19.354</td>
<td align="left">0.141</td>
<td align="left">91.170</td>
<td align="left">21.527</td>
<td align="left">P-coumaric acid derivative</td>
<td align="left">
<xref ref-type="bibr" rid="B56">Ovais et al. (2018)</xref>
</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s4-2">
<title>Characterization of the synthesized AgNPs</title>
<p>The reaction mixture was turned brown after mixing the equal volume of AgNO<sub>3</sub> (4&#xa0;mM) with plant extract (5&#xa0;mg/ml) at room temperature. Plant extract reduced the AgNO<sub>3</sub> solution to Ag ions and capped the Ag<sup>&#x2b;</sup> with important secondary constituents. The silver ions in the presence of plant secondary constituents were stabilized into Ag nanoparticles. The appearance of brown color was due to silver ions reduction which is a general characteristic for the AgNPs biosynthesis. No color change was observed after 24&#xa0;h (<xref ref-type="fig" rid="F3">Figure 3A</xref>).</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>
<bold>(A)</bold> Color change of reaction mixture, <bold>(B)</bold> and <bold>(C)</bold> UV-Visible absorbance spectrum of the biosynthesized AgNPs.</p>
</caption>
<graphic xlink:href="fbioe-10-988607-g003.tif"/>
</fig>
<p>The UV-Vis spectral analysis showed an increase spectrum between 380&#xa0;nm and 500&#xa0;nm where the highest absorbance peak was recorded at 440&#xa0;nm. Moreover, the solution was observed under UV-Vis spectra at different time interval for 30&#xa0;days showing no momentous change in the absorbance spectrum after 48&#xa0;h (<xref ref-type="fig" rid="F3">Figures 3B,C</xref>).</p>
<p>FTIR analysis of the plant extract identify different peaks at specific wavenumber indicating the occurrence of various functional groups. Briefly, broad peaks at 3,499&#xa0;cm<sup>&#x2212;1</sup> and 3,200&#xa0;cm<sup>&#x2212;1</sup> was due to the O-H stretching of alcohol. A medium peak at 3,086&#xa0;cm<sup>&#x2212;1</sup> was found due to the C-H stretching of alkene. A weak band at 2,569&#xa0;cm<sup>&#x2212;1</sup> was detected for the S-H stretching of thiol. At 2,276&#xa0;cm<sup>&#x2212;1</sup> a strong broad band was observed for the N &#x3d; C &#x3d; O stretching of isocyanate. A strong peak at 1809&#xa0;cm<sup>&#x2212;1</sup> was due to the C &#x3d; O stretching of acid halide. A medium peak at 1,635 was present due the C &#x3d; C stretching of alkene. Similarly, the FTIR analysis of AgNPs also revealed various peaks for specific functional groups. Concisely, a weak broad peak at 3,017.6&#xa0;cm<sup>&#x2212;1</sup> and 2,904&#xa0;cm<sup>&#x2212;1</sup> was detected for the O-H stretching of alcohol. A weak peak at 2,595.2&#xa0;cm<sup>&#x2212;1</sup> was observed for the S-H stretching of thiol and at 2,276.8&#xa0;cm<sup>&#x2212;1</sup> a strong broad band was detected due to N &#x3d; C &#x3d; O stretching of isocyanate. A medium band at 1,635.2&#xa0;cm<sup>&#x2212;1</sup> was observed due to C &#x3d; C stretching of conjugated alkene. These groups were probably detected due to the capping layers of the plant secondary metabolites and resulted with stable formation of AgNPs (<xref ref-type="fig" rid="F4">Figure 4</xref>).</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>FTIR spectrum of plant extract and AgNPs showing bands for various functional groups responsible for stabilization of silver nanoparticles.</p>
</caption>
<graphic xlink:href="fbioe-10-988607-g004.tif"/>
</fig>
<p>The size and shape details of the biosynthesized AgNPs were analyzed with TEM. The TEM micrographs showed different shapes for AgNPs but maximum particles were round or spherical in shape. It can be clearly seen in TEM images that the size of the biosynthesized AgNPs ranged from 8&#xa0;nm to 34&#xa0;nm and most of them were monodispersed. The TEM observations showed that due to presence of capping agents the prepared AgNPs were not in straight contact even inside aggregates. Further, Brags reflections rings were recorded in selected area electron diffraction (SAED) study that were corresponding to the crystalline nature of AgNPs (<xref ref-type="fig" rid="F5">Figure 5A</xref>). Histogram showing size distribution of the synthesized AgNPs is shown in <xref ref-type="fig" rid="F5">Figure 5B</xref>.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>
<bold>(A)</bold> TEM images and SAED pattern of the green synthesized AgNPs. <bold>(B)</bold> Histogram showing size distribution of the synthesized AgNPs.</p>
</caption>
<graphic xlink:href="fbioe-10-988607-g005.tif"/>
</fig>
<p>The elemental composition for the prepared AgNPs were determined using energy dispersive x-ray spectroscopy. The major peaks for Ag, Cl, C, O and S elements were found at EDX spectra having the weight percentage 77.85, 15.44, 4.92, 1.50 and 0.30 respectively. The high energy peak spectrum between 3&#xa0;KeV and 4&#xa0;KeV was noticed which is particular for Ag element (<xref ref-type="fig" rid="F6">Figure 6A</xref>). Similarly, the XRD study were performed over 2<italic>&#x3b8;</italic> diffraction angle ranging from 10&#xb0; to 80&#xb0; that showed four different Bragg&#x2019;s reflections. The XRD diffraction peaks AgNPs were located at 38.30, 44.35, 64.40, and 77.55 equivalent to the silver crystal planes of (111), (200), (220), and (311) respectively. The average crystallite size of AgNPs found according to Debye&#x2013;Scherrer equation was 27&#xa0;nm (<xref ref-type="fig" rid="F6">Figure 6B</xref>).</p>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>
<bold>(A)</bold> Energy dispersive x-ray and <bold>(B)</bold> XRD pattern of the biosynthesized AgNPs.</p>
</caption>
<graphic xlink:href="fbioe-10-988607-g006.tif"/>
</fig>
</sec>
<sec id="s4-3">
<title>
<italic>In vitro</italic> inhibition of <italic>F. oxysporum</italic>
</title>
<p>The AgNPs (100&#xa0;&#x3bc;g/ml), plant extract (5&#xa0;mg/ml) and AgNPs-PE (100&#xa0;&#x3bc;g/ml) strongly inhibited the growth of <italic>F. oxysporum</italic> in the well and disc diffusion methods. The AgNPs-PE exhibited highest inhibition, followed by AgNPs and plant extract while no inhibition in response to water (control) was observed. In well diffusion method, the AgNPs-PE, AgNPs and plant extract inhibited the growth by 18&#xa0;mm <inline-formula id="inf7">
<mml:math id="m8">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1&#xa0;mm, 11&#xa0;mm <inline-formula id="inf8">
<mml:math id="m9">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1&#xa0;mm and 5&#xa0;mm <inline-formula id="inf9">
<mml:math id="m10">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1&#xa0;mm respectively while in disc diffusion method it was 14&#xa0;mm <inline-formula id="inf10">
<mml:math id="m11">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1&#xa0;mm, 9&#xa0;mm <inline-formula id="inf11">
<mml:math id="m12">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1&#xa0;mm and 3&#xa0;mm <inline-formula id="inf12">
<mml:math id="m13">
<mml:mo>&#xb1;</mml:mo>
</mml:math>
</inline-formula> 1&#xa0;mm respectively (<xref ref-type="fig" rid="F7">Figure 7</xref>).</p>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>
<italic>In vitro</italic> well diffusion. <bold>(A)</bold> and disc diffusion, <bold>(B)</bold> methods. AgNPs treated, 1 plant extract treated, 2 AgNPs-PE combined treated, 3 and water as control 4.</p>
</caption>
<graphic xlink:href="fbioe-10-988607-g007.tif"/>
</fig>
</sec>
<sec id="s4-4">
<title>
<italic>In planta</italic> inhibition of <italic>F. oxysporum</italic>
</title>
<p>To investigate the <italic>in planta</italic> antifungal activities against the <italic>Fusarium</italic> wilt of tomato, the pot grown plants were treated with AgNPs (100&#xa0;&#x3bc;g/ml), plant extract (5&#xa0;mg/ml), AgNPs-PE (100&#xa0;&#x3bc;g/ml), fungicide bromuconazole (100&#xa0;&#x3bc;g/ml) as positive control and water as negative control. After inoculation, the control plants treated with water started yellowing of the leaves, followed by wilting and stunting of growth. However, the plants treated with fungicide inhibited the pathogen and the plants showed optimum growth. Similarly, no wilting symptoms were observed in response to both concentrations (100&#xa0;&#xb5;g) of AgNPs. However, the plants treated with plant extract showed partial onset of wilting symptoms. Overall, the AgNPs-PE completely inhibited the <italic>F. oxysporum</italic> growth and the plants were healthy and showed maximum growth. The percent plant survival after inoculation of <italic>F. oxysporum</italic> in response to different treatment is shown in <xref ref-type="fig" rid="F8">Figure 8</xref>. The obtained results of <italic>in planta</italic> experiment were correlated with the results of <italic>in vitro</italic> experiment and both showed comparable effects. Moreover, the effects of different treatments on root and shoot length, and on biomass has been presented in <xref ref-type="table" rid="T4">Table 4</xref>.</p>
<fig id="F8" position="float">
<label>FIGURE 8</label>
<caption>
<p>In planta treatments against F. oxysporum. Bar graph showing plant survival percent after the inoculation of F. oxysporum. Treatments included: 1 AgNPs (100&#xa0;&#x3bc;g/ml); 2 plant extract (5&#xa0;mg/ml); 3 AgNPs-PE (AgNPs 100&#xa0;&#x3bc;g/ml &#x2b; PE 5&#xa0;mg/ml); 4 fungicide (bromuconazole 100&#xa0;&#x3bc;g/ml); 5 AgNPs (50&#xa0;&#x3bc;g/ml); 6 Control. Different letters are representing statistically significant differences after performing Tukey HSD test.</p>
</caption>
<graphic xlink:href="fbioe-10-988607-g008.tif"/>
</fig>
<table-wrap id="T4" position="float">
<label>TABLE 4</label>
<caption>
<p>Effect of different treatments on the growth parameters of tomato during in planta experiment against F. oxysporum. Different letters are showing statistical differences among treatments at <italic>p</italic> &#x3c; 0.05 after performing Tukey HSD test.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Treatment</th>
<th align="left">Fresh biomass (g)</th>
<th align="left">Root length (cm)</th>
<th align="left">Shoot length (cm)</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">AgNPs (100&#xa0;&#x3bc;g/ml)</td>
<td align="left">26.98<sup>b</sup>
</td>
<td align="left">11.22<sup>b</sup>
</td>
<td align="left">20.22<sup>b</sup>
</td>
</tr>
<tr>
<td align="left">Plant extract (5&#xa0;mg/ml)</td>
<td align="left">20.72<sup>d</sup>
</td>
<td align="left">5.16<sup>d</sup>
</td>
<td align="left">15.16<sup>d</sup>
</td>
</tr>
<tr>
<td align="left">AgNPs-PE (AgNPs 100&#xa0;&#x3bc;g/ml &#x2b; PE 5&#xa0;mg/ml)</td>
<td align="left">28.93<sup>a</sup>
</td>
<td align="left">12.56<sup>a</sup>
</td>
<td align="left">22.56<sup>a</sup>
</td>
</tr>
<tr>
<td align="left">Fungicide (bromuconazole 100&#xa0;&#x3bc;g/ml)</td>
<td align="left">29.34<sup>a</sup>
</td>
<td align="left">12.78<sup>a</sup>
</td>
<td align="left">22.78<sup>a</sup>
</td>
</tr>
<tr>
<td align="left">AgNPs (50&#xa0;&#x3bc;g/ml)</td>
<td align="left">23.12<sup>c</sup>
</td>
<td align="left">10.12<sup>c</sup>
</td>
<td align="left">18.12<sup>c</sup>
</td>
</tr>
<tr>
<td align="left">Control</td>
<td align="left">13.43<sup>e</sup>
</td>
<td align="left">2.60<sup>e</sup>
</td>
<td align="left">11.61<sup>e</sup>
</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
</sec>
<sec sec-type="discussion" id="s5">
<title>Discussion</title>
<p>The overuse of synthetic pesticides leads to disease resistance in microbes which is becoming a major hazard to health of beneficial life forms including human (<xref ref-type="bibr" rid="B64">Rudramurthy et al., 2016</xref>). These resistant microbes cause various diseases and reduce the yield and quality of crops (<xref ref-type="bibr" rid="B21">Fletcher et al., 2006</xref>). An example of such diseases is <italic>Fusarium</italic> wilt of tomato which negatively affect the plant growth and productivity (<xref ref-type="bibr" rid="B59">Prajapat et al., 2013</xref>; <xref ref-type="bibr" rid="B57">&#xd6;zkara et al., 2016</xref>. However, due to their non-hazardous nature, silver nanoparticles have been used as antimicrobial agents against disease causing microbes (<xref ref-type="bibr" rid="B15">Burdusel et al., 2018</xref>; <xref ref-type="bibr" rid="B48">Liao et al., 2019</xref>). Several reports have shown the effectiveness of green synthesized AgNPs against a variety of microbes due to the combined effects of plant secondary metabolites and Ag metal (<xref ref-type="bibr" rid="B44">Kim et al., 2007</xref>; <xref ref-type="bibr" rid="B18">Choudhury et al., 2016</xref>; <xref ref-type="bibr" rid="B19">Dur&#xe1;n et al., 2016</xref>; <xref ref-type="bibr" rid="B50">Marslin et al., 2018</xref>). Moreover, plant based synthesis of silver nanoparticles is economically feasible, efficient against pathogens and non-toxic (<xref ref-type="bibr" rid="B31">Liaqat et al., 2022</xref>; <xref ref-type="bibr" rid="B2">Ahmed and Mustafa, 2020</xref>).</p>
<p>In the present report, <italic>P. geminiflorum</italic> leaf extract was investigated for phytochemicals and antioxidant activity along with antifungal properties of the biosynthesized AgNPs. Plant secondary metabolites including terpenoids, flavonoids, phenolics etc. may act as reducing and stabilizing agents in green synthesizing nanoparticles; however, complexity about the exact mechanism of synthesis exists (<xref ref-type="bibr" rid="B50">Marslin et al., 2018</xref>). This may be attributed to the synergism of these biomolecules in reduction of metal ions and variable phytochemical profiles of different plant extracts leading to uncertainty about a generalized mechanism. The potential role of these biomolecules in synthesis of nanoparticles has been extensively discussed by <xref ref-type="bibr" rid="B53">Mustapha et al. (2022)</xref> and <xref ref-type="bibr" rid="B73">Siddiqi et al. (2018)</xref>. <xref ref-type="bibr" rid="B34">Jain and Mehata, (2017)</xref> and <xref ref-type="bibr" rid="B58">Pradeep et al. (2021)</xref> have recently documented reduction of silver ions through standard phenolic compounds. Still, other metabolites like terpenes have also been documented to exhibit dual role i.e. capping as well as reducing agents (<xref ref-type="bibr" rid="B51">Mashwani et al., 2016</xref>). TPC in methanolic extract (48.32&#xa0;mg &#xb1; 1.54&#xa0;mg GAE/g) and aqueous extract (42.30&#xa0;mg &#xb1; 1.73&#xa0;mg GAE/g) was found to be comparable. Moreover, the highest total flavonoid content found in 1,000&#xa0;&#x3bc;g/ml was 57.08&#xa0;mg &#xb1; 1.36&#xa0;mg QE/g which was compared with previous studies (<xref ref-type="bibr" rid="B29">Gupta et al., 2018</xref>; <xref ref-type="bibr" rid="B54">Nazir et al., 2020</xref>). Highest DPPH radical scavenging activity of 88.23% &#xb1; 0.87% was exhibited by the methanolic extract. Moreover, a total of fifteen phenolic compounds were found in the leaf extract with respect to standards and reported data. The results were compared with previous studies on HPLC based phytochemical investigations of <italic>Pistacia integerrima</italic>, <italic>Pisum sativum</italic> L. <italic>Ziziphus oxyphylla, Grewia optiva</italic> (<xref ref-type="bibr" rid="B54">Nazir et al., 2020</xref>; <xref ref-type="bibr" rid="B69">Sharifi-Rad et al., 2020</xref>). Results depicted rich phytochemical profile and significant antioxidant properties of the investigated plant extract which suggest its probable involvement as the major reducing compounds of silver ions. The solution turned brown due to reduction of silver ions in reaction mixture which indicated the formation of silver nanoparticles, and the result was compared with previously reported studies on green nanoparticles synthesis (<xref ref-type="bibr" rid="B8">Ali et al., 2016</xref>; <xref ref-type="bibr" rid="B11">Arif et al., 2022</xref>). Moreover, a characteristic surface plasmon resonance peak at 440&#xa0;nm during UV-Vis analysis was observed which further confirmed the synthesis of nanoparticles. The obtained UV-Vis spectral data was compared with previous studies which showed similar pattern for silver nanoparticles (<xref ref-type="bibr" rid="B9">Ali et al., 2015</xref>; <xref ref-type="bibr" rid="B50">Marslin et al., 2018</xref>; <xref ref-type="bibr" rid="B2">Ahmed and Mustafa, 2020</xref>).</p>
<p>The FTIR spectra identified various functional groups responsible for the synthesis process of AgNPs. These functional groups were likely responsible for synthesis of and providing capping layers to Ag nanoparticles. Therefore, the synthesized AgNPs were more stable and non-toxic as previously been discovered by <xref ref-type="bibr" rid="B11">Arif et al. (2022)</xref>. The TEM analysis revealed spherical or round shaped monodispersed AgNPs that were not in direct contact because of the capping layers of secondary metabolites. The SAED analysis showed the synthesized particles as of crystalline nature. The EDX study showed an intense peak of Ag metal with a weight of 77.85%. The TEM and EDX based results about the physical characteristics of nanoparticles were positively correlated with previous studies (<xref ref-type="bibr" rid="B41">Khan et al., 2020</xref>).</p>
<p>The XRD analysis revealed the planes of 111, 200, 220, and 311 at diffraction peaks of 38.30, 44.35, 64.40, and 77.55, respectively. Moreover, the Debye&#x2013;Scherrer equation showed the average size of 27&#xa0;nm and the obtained results were compared to the previous literature studies (<xref ref-type="bibr" rid="B14">Bindhu et al., 2020</xref>; <xref ref-type="bibr" rid="B25">Ghojavand et al., 2020</xref>).</p>
<p>The prepared AgNPs showed substantial antifungal activity against <italic>F. oxysporum</italic>. The <italic>in vitro</italic> experiment resulted in significant inhibition potency of AgNPs-PE against the tested fungus. The plant extract has important secondary constituents that coat and increase the antimicrobial effects of Ag metal. Further, antifungal activities of the AgNPs-PE, AgNPs (100&#xa0;&#x3bc;g/ml), plant extract and fungicide were compared using <italic>in planta</italic> experiment. The <italic>in planta</italic> experiment revealed efficiency of the AgNPs-PE with the highest percent survival of plants. However, the AgNPs (50&#xa0;&#x3bc;g/ml) showed pronounced antifungal activity because no symptoms of leaf yellowing (chlorosis) was observed throughout the experiment. The obtained results of <italic>in vitro</italic> and <italic>in planta</italic> experiments are in general agreement and much promising when correlated with the previously reported studies on antimicrobial activities of silver nanoparticles (<xref ref-type="bibr" rid="B38">Jo et al., 2009</xref>; <xref ref-type="bibr" rid="B9">Ali et al., 2015</xref>; <xref ref-type="bibr" rid="B26">Gopinath et al., 2017</xref>; <xref ref-type="bibr" rid="B75">Some et al., 2018</xref>; <xref ref-type="bibr" rid="B5">Alam et al., 2019</xref>; <xref ref-type="bibr" rid="B32">Haroon et al., 2019</xref>; <xref ref-type="bibr" rid="B65">Santiago et al., 2019</xref>; <xref ref-type="bibr" rid="B83">Vanti et al., 2019</xref>; <xref ref-type="bibr" rid="B62">Renuka et al., 2020</xref>; <xref ref-type="bibr" rid="B63">Rizwan et al., 2020</xref>; <xref ref-type="bibr" rid="B80">Tariq et al., 2021</xref>). The green AgNPs in the presence of plant capping agents did not allow particles to aggregate and increases its long-term stability (<xref ref-type="bibr" rid="B77">Spagnoletti et al., 2021</xref>). The plant extract carries out dual function i.e., perform the reduction of silver ion and stabilization of AgNPs in the reaction mixture (<xref ref-type="bibr" rid="B78">Sunkar and Nachiyar, 2012</xref>). The AgNPs-PE showed the highest activity because of its increased antifungal property due to the presence of plant secondary chemicals.</p>
<p>Green synthesized nanoparticles are considered advantageous because of its non-toxicity, environment friendly nature, are more economical and sustainable (<xref ref-type="bibr" rid="B10">Alsammarraie et al., 2018</xref>; <xref ref-type="bibr" rid="B87">Ying et al., 2022</xref>). At the same time, less availability of raw materials and high homogeneity in particle size of the final product may affect its quality (<xref ref-type="bibr" rid="B82">Turunc et al., 2017</xref>; <xref ref-type="bibr" rid="B89">Zhang et al., 2020</xref>). Both <italic>in vitro</italic> and <italic>in planta</italic> results showed significant inhibition of the <italic>F. oxysporum</italic> which may be attributed to capping of AgNPs by plant secondary constituents that increased its antifungal potential (<xref ref-type="bibr" rid="B51">Mashwani et al., 2016</xref>; <xref ref-type="bibr" rid="B50">Marslin et al., 2018</xref>; <xref ref-type="bibr" rid="B83">Vanti et al., 2019</xref>; <xref ref-type="bibr" rid="B47">Leon-Buitimea et al., 2020</xref>) (8, 52, 60,and 74). Our findings regarding the synthesis and antifungal activity suggested that green AgNPs as a novel drug can be used on large industrial scale in order to control the growth of <italic>F. oxysporum</italic>.</p>
<p>The antimicrobial mechanism of metal nanoparticles against plant pathogens has been excellently reviewed (<xref ref-type="bibr" rid="B7">Ali et al., 2020</xref>). Although the exact mechanism of action of nanoparticles against microbes is not clear, various mechanisms are thought to be involved. The antimicrobial activities of AgNPs could be the result of a loss of replication activity that inactivates the cellular proteins and enzymes of the pathogens (<xref ref-type="bibr" rid="B20">Feng et al., 2000</xref>; <xref ref-type="bibr" rid="B85">Yamanaka et al., 2005</xref>). Previously, AgNPs have shown to arrest mycelial growth of <italic>Fusarium oxysporum</italic> (<xref ref-type="bibr" rid="B3">Akpinar et al., 2021</xref>), <italic>Fusarium graminearum</italic> (<xref ref-type="bibr" rid="B36">Jian et al., 2022</xref>) and <italic>Phytophthora spp.</italic> (<xref ref-type="bibr" rid="B9">Ali et al., 2015</xref>). A recent study on the molecular level inhibition of <italic>Fusarium graminearum</italic> in response to AgNPs has shown to induce the expression of azole-related ATP-binding cassette (ABC) transporters and generation of reactive oxygen species, and thus compromise the development, cell structure, cellular energy utilization, and metabolic pathways of this fungus (<xref ref-type="bibr" rid="B36">Jian et al., 2022</xref>). Other studies show that nanoparticles penetrate the cell wall and cell membrane and disrupt the cell integrity (<xref ref-type="bibr" rid="B52">Mikhailova, 2020</xref>). Some reports suggest nanoparticles induced damage to DNA RNA and proteins, leakage of cellular contents and ultimately death of cells (<xref ref-type="bibr" rid="B45">Kumari et al., 2019</xref>; <xref ref-type="bibr" rid="B92">Zhou et al., 2021</xref>). Moreover, the application of AgNPs on tomato seedlings has demonstrated to stimulate the antioxidant potential in hydroponics (<xref ref-type="bibr" rid="B55">Noori et al., 2020</xref>) which could be considered to enhance the antimicrobial action of AgNPs.</p>
</sec>
<sec sec-type="conclusions" id="s6">
<title>Conclusions</title>
<p>In the present study, we found <italic>P. geminiflorum</italic> an excellent biological substrate for AgNPs synthesis, most probably due to its rich medicinal phytochemical profile. The plant species showed major medicinal secondary metabolites in qualitative and quantitative analysis. Moreover, the antioxidant activity of the leaf extract was found to be linked with medicinally important secondary metabolites. The AgNPs (100&#xa0;&#x3bc;g/ml) and the AgNPs-PE (100&#xa0;&#x3bc;g/ml) inhibited the growth of <italic>F. oxysporum</italic> substantially in the <italic>in vitro</italic> experiment. Further, the <italic>in planta</italic> application of AgNPs alone and combined with plant extract prevented the wilting disease of tomato caused by <italic>F. oxysporum</italic>. Therefore, the antifungal silver nanoparticles synthesized in the current study could be effectively used against <italic>F. oxysporum</italic> as alternatives to hazardous synthetic pesticides. However, further studies are needed to evaluate the antifungal potency of AgNPs alone and in combination with <italic>P. geminiflorum</italic> in the field conditions.</p>
</sec>
</body>
<back>
<sec sec-type="data-availability" id="s7">
<title>Data availability statement</title>
<p>The original contributions presented in the study are included in the article/Supplementary Material, further inquiries can be directed to the corresponding authors.</p>
</sec>
<sec id="s8">
<title>Author contributions</title>
<p>AA and MoA designed the research. MaA conducted the research. Interpretation of the results was done by IA and ZU. The manuscript draft was prepared by AA, HS, D-QD, JI, MZ and IA.</p>
</sec>
<sec id="s9">
<title>Funding</title>
<p>This research was supported by the National Natural Science Foundation of China (No. NSFC 31760013) and High-Level Talent Recruitment Plan of Yunnan Provinces Young Talents Program.</p>
</sec>
<sec sec-type="COI-statement" id="s10">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s11">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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