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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Ecol. Evol.</journal-id>
<journal-title>Frontiers in Ecology and Evolution</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Ecol. Evol.</abbrev-journal-title>
<issn pub-type="epub">2296-701X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fevo.2017.00162</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Ecology and Evolution</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Molecular Phylogeny and Biogeography of <italic>Adenocaulon</italic> Highlight the Biogeographic Links between New World and Old World</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Deng</surname> <given-names>Tao</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn003"><sup>&#x02020;</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Chen</surname> <given-names>Yongsheng</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="author-notes" rid="fn003"><sup>&#x02020;</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Wang</surname> <given-names>Hengchang</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/424043/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Zhang</surname> <given-names>Xiaoshuang</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Volis</surname> <given-names>Sergei</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/103162/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Yusupov</surname> <given-names>Ziyoviddin</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/502436/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Qian</surname> <given-names>Hong</given-names></name>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Sun</surname> <given-names>Hang</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/415977/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences</institution>, <addr-line>Kunming</addr-line>, <country>China</country></aff>
<aff id="aff2"><sup>2</sup><institution>College of Life Science, Northeast Agricultural University</institution>, <addr-line>Harbin</addr-line>, <country>China</country></aff>
<aff id="aff3"><sup>3</sup><institution>Key Laboratory of Plant Germplasm Enhancement and Specialty Agriculture, Wuhan Botanical Garden, Chinese Academy of Sciences</institution>, <addr-line>Wuhan</addr-line>, <country>China</country></aff>
<aff id="aff4"><sup>4</sup><institution>Key Laboratory of Plant Resources Conservation and Utilization, College of Biology and Environmental Sciences, Jishou University</institution>, <addr-line>Jishou</addr-line>, <country>China</country></aff>
<aff id="aff5"><sup>5</sup><institution>Research and Collections Center, Illinois State Museum</institution>, <addr-line>Springfield, IL</addr-line>, <country>United States</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Daniel M. Griffith, Oregon State University, United States</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Tao Su, Xishuangbanna Tropical Botanical Garden (CAS), China; Xiaolei Huang, Fujian Agriculture and Forestry University, China</p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x0002A;Correspondence: Hang Sun <email>sunhang&#x00040;mail.kib.ac.cn</email></p></fn>
<fn fn-type="other" id="fn002"><p>This article was submitted to Biogeography and Macroecology, a section of the journal Frontiers in Ecology and Evolution</p></fn>
<fn fn-type="other" id="fn003"><p>&#x02020;These authors have contributed equally to this work.</p></fn></author-notes>
<pub-date pub-type="epub">
<day>04</day>
<month>01</month>
<year>2018</year>
</pub-date>
<pub-date pub-type="collection">
<year>2017</year>
</pub-date>
<volume>5</volume>
<elocation-id>162</elocation-id>
<history>
<date date-type="received">
<day>26</day>
<month>08</month>
<year>2017</year>
</date>
<date date-type="accepted">
<day>29</day>
<month>11</month>
<year>2017</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2018 Deng, Chen, Wang, Zhang, Volis, Yusupov, Qian and Sun.</copyright-statement>
<copyright-year>2018</copyright-year>
<copyright-holder>Deng, Chen, Wang, Zhang, Volis, Yusupov, Qian and Sun</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract><p><italic>Adenocaulon</italic> (Asteraceae) is a small genus with only five species but has a broad amphi-Pacific distribution pattern with three species distributed disjunctly in South America, Central America, and North America and two endemic species spanning from eastern Asia to the Himalayas. To trace the biogeographic pattern of the genus, we reconstructed its phylogenetic relationships and diversification history based on one nuclear and eight plastid gene regions. Our results showed that <italic>Adenocaulon</italic> is monophyletic and may have originated in Central America during the Miocene, dispersed into North America and finally reached the Himalayas via the Bering Land Bridge. The hypothesized trajectory implies that long-distance dispersal may have played an important role in the formation of the distribution of this group of species. This hypothesis seems to have gained support from the special morphological structure of fruits of the genus.</p></abstract>
<kwd-group>
<kwd><italic>Adenocaulon</italic></kwd>
<kwd>Asteraceae</kwd>
<kwd>East Asia</kwd>
<kwd>America</kwd>
<kwd>herbaceous flora</kwd>
</kwd-group>
<contract-num rid="cn001">31590823</contract-num>
<contract-num rid="cn001">31700165</contract-num>
<contract-num rid="cn002">2017YFC0505200</contract-num>
<contract-sponsor id="cn001">National Natural Science Foundation of China<named-content content-type="fundref-id">10.13039/501100001809</named-content></contract-sponsor>
<contract-sponsor id="cn002">Ministry of Science and Technology of the People&#x00027;s Republic of China<named-content content-type="fundref-id">10.13039/501100002855</named-content></contract-sponsor>
<contract-sponsor id="cn003">Chinese Academy of Sciences<named-content content-type="fundref-id">10.13039/501100002367</named-content></contract-sponsor>
<counts>
<fig-count count="3"/>
<table-count count="1"/>
<equation-count count="0"/>
<ref-count count="56"/>
<page-count count="10"/>
<word-count count="5913"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>The genus <italic>Adenocaulon</italic> Hook., consisting of five species, is a small genus in the angiosperm family Asteraceae, and has a broad amphi-Pacific distribution (Bittmann, <xref ref-type="bibr" rid="B5">1990</xref>). Two species are endemic to East Asia while the other three occur in North and South America. Among them, <italic>Adenocaulon nepalense</italic> Bittmann is native to Bhutan, Nepal and India, and <italic>Adenocaulon himalaicum</italic> Edgew is distributed from the Himalayas to northeastern Asia and Japan (Bittmann, <xref ref-type="bibr" rid="B5">1990</xref>; Funk and Hind, <xref ref-type="bibr" rid="B21">2016</xref>). In the New World, <italic>Adenocaulon bicolor</italic> Hook. is distributed in North America, <italic>Adenocaulon lyratum</italic> S. F. Blake in Guatemala and Chiapas of Mexico, and <italic>Adenocaulon chilense</italic> Less. in Chile and Argentina (Figure <xref ref-type="fig" rid="F1">1</xref>; Funk and Hind, <xref ref-type="bibr" rid="B21">2016</xref>). Thus the five species generally present a disjunct distribution pattern, with no species of <italic>Adenocaulon</italic> present in Africa, the Mediterranean, tropical Asia or Oceania.</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p><bold>(A)</bold> Distribution of <italic>Adenocaulon</italic> species; <bold>(B,C)</bold>, Habit <bold>(B)</bold> and achenes <bold>(C)</bold> of <italic>A. himalaicum</italic>.</p></caption>
<graphic xlink:href="fevo-05-00162-g0001.tif"/>
</fig>
<p>Historically the taxonomic position of <italic>Adenocaulon</italic> has undergone extensive circumscription. Jensen and Kim (<xref ref-type="bibr" rid="B23">1996</xref>) placed it in the tribe Mutisieae, Katinas (<xref ref-type="bibr" rid="B24">2000</xref>) placed it in Cichorioideae, and Kim et al. (<xref ref-type="bibr" rid="B27">2002</xref>) transferred the genus to the Nassauvieae. A recent molecular phylogenetic study strongly supports the two American species, <italic>A. bicolor</italic> and <italic>A. chilense</italic>, forming a single lineage within Mutisieae (Panero and Funk, <xref ref-type="bibr" rid="B36">2008</xref>), with the relationship of <italic>Adenocaulon</italic> to the other genera in Mutisieae being unresolved. The phylogenetic relationship and geographic pattern of the genus are still unclear. The tribe Mutisieae, as well as other members of the early diverging branches of Asteraceae (e.g., Barnadesioideae and Mutisioideae <italic>s.l</italic>.), has a predominant center of diversity in South America, which is believed to be the most possible ancestral area of these lineages (Katinas et al., <xref ref-type="bibr" rid="B26">2009</xref>; Ortiz et al., <xref ref-type="bibr" rid="B35">2009</xref>).</p>
<p>A distinct feature of members of Asteraceae is one-seeded cypselae fruit. Further, the majority of extant Asteraceae species have a modified calyx above the inferior ovary structure called a pappus, allowing for seed dispersal by wind and biological agents over great distances (Katinas et al., <xref ref-type="bibr" rid="B25">2013</xref>). However, this specialized morphological trait is not evident in <italic>Adenocaulon</italic>. Members of this genus usually grow in under-stories of temperate moist forests (Katinas, <xref ref-type="bibr" rid="B24">2000</xref>), which may well be a good case study of the biogeographic link between the Old World (specifically East Asia) and the New World by inferring the dispersal mechanism and biogeographic patterns across the Pan-Pacific areas.</p>
<p>Although the East Asian and North, Central and South American disjunct pattern is not unusual in angiosperms, and in fact has been investigated in several studies (e.g., Wen et al., <xref ref-type="bibr" rid="B52">2010</xref>), the species-rich family Asteraceae provides a good system to probe the biogeographic pattern of taxa with distinct distribution patterns around the globe (Panero and Funk, <xref ref-type="bibr" rid="B36">2008</xref>). Specifically members of <italic>Adenocaulon</italic> may provide an excellent opportunity to examine species adaptation in a recent diversification. Fossil and phylogenetic evidence demonstrates that Asteraceae may be of South American origin and underwent a major diversification event, followed by an African explosion (DeVore and Stuessy, <xref ref-type="bibr" rid="B12">1995</xref>; Funk et al., <xref ref-type="bibr" rid="B20">2005</xref>; Barreda et al., <xref ref-type="bibr" rid="B2">2010</xref>; Stuessy, 2010) and subsequently moved to various continents (Nie et al., <xref ref-type="bibr" rid="B32">2016</xref>). However, this model does not apply to the small genus <italic>Adenocaulon</italic>.</p>
<p>The goal of this study is to elucidate the phylogenetic relationships within the genus and to infer its historical biogeography utilizing chloroplast and nuclear DNA in conjunction with fossil evidence. Knowing details about how and when the genus originated and dispersed can provide insight into understanding the plausible biogeographic affinity between East Asia and America. Our study would shed new lights on the formation of intercontinental disjunction of plants.</p>
</sec>
<sec sec-type="materials and methods" id="s2">
<title>Materials and methods</title>
<sec>
<title>Taxa sampling and data collection</title>
<p>Ten samples (accessions) were used for each of the 5 species of <italic>Adenocaulon</italic> (Table <xref ref-type="table" rid="T1">1</xref>). Based on the results from previous phylogenetic analyses of Asteraceae (Panero and Funk, <xref ref-type="bibr" rid="B36">2008</xref>; Ortiz et al., <xref ref-type="bibr" rid="B35">2009</xref>), additional samples were used from eight genera that are closely related to <italic>Adenocaulon</italic> (<italic>Gerbera, Leibnitzia, Chaptalia, Trichocline, Brachyclados, Pachylaena, Mutisia</italic>, and <italic>Chaetanthera</italic> of the tribe Mutisieae of the subfamily Mutisioideae) and 15 distantly related genera of the subfamily (<italic>Trixis, Dolichlasium, Jungia, Perezia, Nassauvia, Acourtia, Leucheria, Proustia</italic>, and <italic>Lophopappus</italic> in the tribe Nassauvieae of the subfamily Mutisioideae; <italic>Onoseris, Urmenetea, Lycoseris, Aphyllocladus, Gypothamnium</italic>, and <italic>Plazia</italic> from the tribe Onoserideae of the subfamily Mutisioideae). We also included nine species from Wunderlichioideae and five species from Barnadesioideae. We used <italic>Acicarpha spathulata</italic> (Calyceraceae) to serve as the outgroup, following Panero and Funk (<xref ref-type="bibr" rid="B36">2008</xref>) (Table <xref ref-type="table" rid="T1">1</xref>).</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>Species names, localities, voucher deposition, and GenBank accession numbers used in the present study.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>Taxa</bold></th>
<th valign="top" align="left"><bold>Voucher No</bold>.</th>
<th valign="top" align="left"><bold>Country</bold></th>
<th valign="top" align="left"><bold>Herbarium</bold></th>
<th valign="top" align="left"><bold>ITS</bold></th>
<th valign="top" align="left"><bold>matK</bold></th>
<th valign="top" align="left"><bold>ndhF</bold></th>
<th valign="top" align="left"><bold>rbcL</bold></th>
<th valign="top" align="left"><bold>rpoB</bold></th>
<th valign="top" align="left"><bold>trnL-F</bold></th>
<th valign="top" align="left"><bold>psbA-trnH</bold></th>
<th valign="top" align="left"><bold>rpl32-trnL</bold></th>
<th valign="top" align="left"><bold>rpl32-ndhF</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><italic>Acicarpha tribuloides</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">EU841174</td>
<td valign="top" align="left">EU841362</td>
<td valign="top" align="left">AJ429129</td>
<td valign="top" align="left">EU841135</td>
<td/>
<td valign="top" align="left">EU547626</td>
<td valign="top" align="left">EU841312</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Acourtia turbinata</italic></td>
<td valign="top" align="left">Panero 2891</td>
<td valign="top" align="left">Mexico</td>
<td valign="top" align="left">TEX.</td>
<td valign="top" align="left">FJ979684</td>
<td valign="top" align="left">EU385317</td>
<td valign="top" align="left">EU385126</td>
<td valign="top" align="left">EU384940</td>
<td valign="top" align="left">EU385412</td>
<td valign="top" align="left">EU385032</td>
<td/>
<td valign="top" align="left">FJ979732</td>
<td valign="top" align="left">FJ979784</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Adenocaulon bicolor</italic></td>
<td/>
<td valign="top" align="left">USA</td>
<td valign="top" align="left">TEX.</td>
<td valign="top" align="left">FJ979672</td>
<td valign="top" align="left">EU385320</td>
<td valign="top" align="left">EU385129</td>
<td valign="top" align="left">EU384943</td>
<td valign="top" align="left">EU385415</td>
<td valign="top" align="left">EU385035</td>
<td/>
<td valign="top" align="left">FJ979722</td>
<td valign="top" align="left">FJ979773</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Adenocaulon chilense</italic></td>
<td valign="top" align="left">Simon 382</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">FJ979674</td>
<td valign="top" align="left">EU385319</td>
<td valign="top" align="left">EU385128</td>
<td valign="top" align="left">EU384942</td>
<td valign="top" align="left">EU385414</td>
<td valign="top" align="left">EU385034</td>
<td/>
<td valign="top" align="left">FJ979724</td>
<td valign="top" align="left">FJ979775</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Adenocaulon himalaicum</italic></td>
<td valign="top" align="left">dt35</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">KUN</td>
<td valign="top" align="left">MG710419</td>
<td valign="top" align="left">MG710438</td>
<td valign="top" align="left">MG710431</td>
<td valign="top" align="left">MG710457</td>
<td valign="top" align="left">MG710426</td>
<td valign="top" align="left">MG710451</td>
<td valign="top" align="left">MG710467</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Adenocaulon himalaicum</italic></td>
<td valign="top" align="left">dt36</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">KUN</td>
<td valign="top" align="left">MG710420</td>
<td valign="top" align="left">MG710439</td>
<td valign="top" align="left">MG710432</td>
<td valign="top" align="left">MG710458</td>
<td valign="top" align="left">MG710427</td>
<td valign="top" align="left">MG710452</td>
<td valign="top" align="left">MG710468</td>
<td valign="top" align="left">MG710445</td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Adenocaulon himalaicum</italic></td>
<td valign="top" align="left">dt060</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">KUN</td>
<td valign="top" align="left">MG710421</td>
<td valign="top" align="left">MG710440</td>
<td valign="top" align="left">MG710433</td>
<td valign="top" align="left">MG710459</td>
<td valign="top" align="left">MG710428</td>
<td valign="top" align="left">MG710453</td>
<td valign="top" align="left">MG710469</td>
<td valign="top" align="left">MG710446</td>
<td valign="top" align="left">MG710464</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Adenocaulon himalaicum</italic></td>
<td valign="top" align="left">dt061</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">KUN</td>
<td valign="top" align="left">MG710422</td>
<td valign="top" align="left">MG710441</td>
<td valign="top" align="left">MG710434</td>
<td valign="top" align="left">MG710460</td>
<td valign="top" align="left">MG710429</td>
<td valign="top" align="left">MG710454</td>
<td valign="top" align="left">MG710470</td>
<td valign="top" align="left">MG710447</td>
<td valign="top" align="left">MG710465</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Adenocaulon himalaicum</italic></td>
<td valign="top" align="left">dt062</td>
<td valign="top" align="left">China</td>
<td valign="top" align="left">KUN</td>
<td valign="top" align="left">MG710423</td>
<td valign="top" align="left">MG710442</td>
<td valign="top" align="left">MG710435</td>
<td valign="top" align="left">MG710461</td>
<td valign="top" align="left">MG710430</td>
<td valign="top" align="left">MG710455</td>
<td valign="top" align="left">MG710471</td>
<td valign="top" align="left">MG710448</td>
<td valign="top" align="left">MG710466</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Adenocaulon himalaicum</italic></td>
<td valign="top" align="left">dt163</td>
<td valign="top" align="left">Korea</td>
<td valign="top" align="left">KUN</td>
<td valign="top" align="left">MG710478</td>
<td valign="top" align="left">MG710482</td>
<td valign="top" align="left">MG710480</td>
<td valign="top" align="left">MG710475</td>
<td valign="top" align="left">MG710474</td>
<td valign="top" align="left">MG710477</td>
<td valign="top" align="left">MG710479</td>
<td valign="top" align="left">MG710476</td>
<td valign="top" align="left">MG710481</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Adenocaulon lyratum</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">FJ979673</td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td valign="top" align="left">FJ979723</td>
<td valign="top" align="left">FJ979774</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Adenocaulon nepalense</italic></td>
<td valign="top" align="left">dt701</td>
<td valign="top" align="left">Bhutan</td>
<td valign="top" align="left">KUN</td>
<td valign="top" align="left">MG710424</td>
<td valign="top" align="left">MG710443</td>
<td valign="top" align="left">MG710436</td>
<td valign="top" align="left">MG710462</td>
<td/>
<td/>
<td valign="top" align="left">MG710472</td>
<td valign="top" align="left">MG710449</td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Adenocaulon nepalense</italic></td>
<td valign="top" align="left">dt702</td>
<td valign="top" align="left">Bhutan</td>
<td valign="top" align="left">KUN</td>
<td valign="top" align="left">MG710425</td>
<td valign="top" align="left">MG710444</td>
<td valign="top" align="left">MG710437</td>
<td valign="top" align="left">MG710463</td>
<td/>
<td valign="top" align="left">MG710456</td>
<td valign="top" align="left">MG710473</td>
<td valign="top" align="left">MG710450</td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Aphyllocladus spartioides</italic></td>
<td valign="top" align="left">Simon 508</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td/>
<td valign="top" align="left">EU385323</td>
<td valign="top" align="left">EU385132</td>
<td valign="top" align="left">EU384946</td>
<td valign="top" align="left">EU385418</td>
<td valign="top" align="left">EU385038</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Barnadesia lehmannii</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">AF412877</td>
<td valign="top" align="left">EU841321</td>
<td valign="top" align="left">L39394</td>
<td valign="top" align="left">EU841100</td>
<td valign="top" align="left">EU385422</td>
<td valign="top" align="left">EU547621</td>
<td valign="top" align="left">EU841272</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Brachyclados caespitosus</italic></td>
<td valign="top" align="left">Bonifacino 459</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td/>
<td valign="top" align="left">EU385329</td>
<td valign="top" align="left">EU385137</td>
<td valign="top" align="left">EU384951</td>
<td valign="top" align="left">EU385424</td>
<td valign="top" align="left">EU385044</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Chaetanthera pentacaenoides</italic></td>
<td valign="top" align="left">Bonifacino 293</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">DQ355904</td>
<td valign="top" align="left">EU385334</td>
<td valign="top" align="left">EU385142</td>
<td valign="top" align="left">EU384956</td>
<td valign="top" align="left">EU385429</td>
<td valign="top" align="left">EU385049</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Chaptalia nutans</italic></td>
<td valign="top" align="left">Panero 2002-19</td>
<td valign="top" align="left">USA</td>
<td valign="top" align="left">TEX.</td>
<td valign="top" align="left">GU126772</td>
<td valign="top" align="left">EU385335</td>
<td valign="top" align="left">EU385143</td>
<td valign="top" align="left">EU384957</td>
<td valign="top" align="left">EU385430</td>
<td valign="top" align="left">EU385050</td>
<td/>
<td valign="top" align="left">GU126751</td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Chimantaea humilis</italic></td>
<td/>
<td/>
<td/>
<td/>
<td valign="top" align="left">EU385336</td>
<td valign="top" align="left">EU385144</td>
<td valign="top" align="left">EU384958</td>
<td valign="top" align="left">EU385431</td>
<td valign="top" align="left">EU385051</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Chuquiraga spinosa</italic></td>
<td valign="top" align="left">Simon 522</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">EU841150</td>
<td valign="top" align="left">EU385338</td>
<td valign="top" align="left">EU385146</td>
<td valign="top" align="left">EU384960</td>
<td valign="top" align="left">EU385433</td>
<td valign="top" align="left">EU385053</td>
<td valign="top" align="left">EU841285</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Dasyphyllum reticulatum</italic></td>
<td/>
<td/>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">AF412862</td>
<td valign="top" align="left">EU385342</td>
<td valign="top" align="left">EU385150</td>
<td valign="top" align="left">AY874428</td>
<td valign="top" align="left">EU385437</td>
<td valign="top" align="left">EU385057</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Dinoseris salicifolia</italic></td>
<td/>
<td/>
<td/>
<td/>
<td valign="top" align="left">EU385346</td>
<td valign="top" align="left">EU385154</td>
<td valign="top" align="left">EU384967</td>
<td valign="top" align="left">EU385441</td>
<td valign="top" align="left">EU385061</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Dolichlasium lagascae</italic></td>
<td valign="top" align="left">Simon 811</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">EF530259</td>
<td valign="top" align="left">EU385347</td>
<td valign="top" align="left">EU385155</td>
<td valign="top" align="left">EU384968</td>
<td valign="top" align="left">EU385442</td>
<td valign="top" align="left">EU385062</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Doniophyton anomalum</italic></td>
<td/>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">EU841164</td>
<td valign="top" align="left">EU385348</td>
<td valign="top" align="left">EU385156</td>
<td valign="top" align="left">EU384969</td>
<td valign="top" align="left">EU385443</td>
<td valign="top" align="left">EU385063</td>
<td valign="top" align="left">EU841297</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Duidaea pinifolia</italic></td>
<td/>
<td/>
<td/>
<td/>
<td valign="top" align="left">EU385349</td>
<td valign="top" align="left">EU385157</td>
<td valign="top" align="left">EU384970</td>
<td valign="top" align="left">EU385444</td>
<td valign="top" align="left">EU385064</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Gerbera piloselloides</italic></td>
<td/>
<td valign="top" align="left">S.Africa</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">GU126788</td>
<td valign="top" align="left">EU385355</td>
<td valign="top" align="left">EU385163</td>
<td valign="top" align="left">EU384975</td>
<td valign="top" align="left">EU385450</td>
<td valign="top" align="left">GU817941</td>
<td valign="top" align="left">GU818379</td>
<td valign="top" align="left">GU126765</td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Gongylolepis benthamiana</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">KF989515</td>
<td valign="top" align="left">KF989843</td>
<td valign="top" align="left">EU385167</td>
<td valign="top" align="left">EU384980</td>
<td valign="top" align="left">EU385454</td>
<td valign="top" align="left">KF989621</td>
<td valign="top" align="left">KF989932</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Gypothamnium pinifolium</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">EU729342</td>
<td valign="top" align="left">KM192116</td>
<td valign="top" align="left">EU729346</td>
<td valign="top" align="left">EU736105</td>
<td valign="top" align="left">KM191884</td>
<td valign="top" align="left">EU729338</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Hyaloseris cinerea</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">KF989512</td>
<td valign="top" align="left">KF989840</td>
<td valign="top" align="left">KF989728</td>
<td valign="top" align="left">EU384989</td>
<td valign="top" align="left">EU385463</td>
<td valign="top" align="left">KF989618</td>
<td valign="top" align="left">KF989929</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Jungia polita</italic></td>
<td valign="top" align="left">Simon 292</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">EF530233</td>
<td valign="top" align="left">EU385370</td>
<td valign="top" align="left">EU385178</td>
<td valign="top" align="left">EU384991</td>
<td valign="top" align="left">EU385465</td>
<td valign="top" align="left">EU385084</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Leibnitzia anandria</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">GU724275</td>
<td valign="top" align="left">HM989740</td>
<td valign="top" align="left">L39402</td>
<td valign="top" align="left">GQ436437</td>
<td/>
<td/>
<td valign="top" align="left">GQ435075</td>
<td valign="top" align="left">GU126756</td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Leucheria thermarum</italic></td>
<td valign="top" align="left">Simon 383</td>
<td valign="top" align="left">Chile</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">EF530254</td>
<td valign="top" align="left">EU385371</td>
<td valign="top" align="left">EU385179</td>
<td valign="top" align="left">EU384992</td>
<td valign="top" align="left">EU385466</td>
<td valign="top" align="left">EU385085</td>
<td valign="top" align="left">EU841306</td>
<td valign="top" align="left">FJ979725</td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Lophopappus cuneatus</italic></td>
<td valign="top" align="left">Simon 563</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">FJ979676</td>
<td valign="top" align="left">EU385374</td>
<td valign="top" align="left">EU385182</td>
<td valign="top" align="left">EU384995</td>
<td valign="top" align="left">EU385469</td>
<td valign="top" align="left">EU385088</td>
<td/>
<td valign="top" align="left">FJ979676</td>
<td valign="top" align="left">FJ979777</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Lycoseris triplinervia</italic></td>
<td/>
<td/>
<td/>
<td/>
<td valign="top" align="left">KM192117</td>
<td valign="top" align="left">KM192106</td>
<td valign="top" align="left">KM192095</td>
<td valign="top" align="left">KM191885</td>
<td valign="top" align="left">KM191907</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Mutisia kurtzii</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">EF530235</td>
<td valign="top" align="left">EU841353</td>
<td valign="top" align="left">AF233835</td>
<td/>
<td/>
<td valign="top" align="left">EF530281</td>
<td valign="top" align="left">EU841303</td>
<td valign="top" align="left">GU126763</td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Nassauvia pygmaea</italic></td>
<td valign="top" align="left">Bonifacin 179</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">EU239267</td>
<td valign="top" align="left">EU385377</td>
<td valign="top" align="left">EU385186</td>
<td valign="top" align="left">EU384999</td>
<td valign="top" align="left">EU385473</td>
<td valign="top" align="left">EU385092</td>
<td valign="top" align="left">EU841309</td>
<td valign="top" align="left">FJ979736</td>
<td valign="top" align="left">FJ979788</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Onoseris ilicifolia</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">KF989529</td>
<td valign="top" align="left">KF989857</td>
<td valign="top" align="left">KF989745</td>
<td valign="top" align="left">GQ890341</td>
<td valign="top" align="left">GQ890344</td>
<td valign="top" align="left">KF989634</td>
<td valign="top" align="left">KF989945</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Pachylaena atriplicifolia</italic></td>
<td valign="top" align="left">Simon 684</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">EF530250</td>
<td valign="top" align="left">EU385383</td>
<td valign="top" align="left">EU385192</td>
<td valign="top" align="left">EU385005</td>
<td valign="top" align="left">EU385479</td>
<td valign="top" align="left">EU385098</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Perezia purpurata</italic></td>
<td valign="top" align="left">Simon 594</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">EF530239</td>
<td valign="top" align="left">EU385385</td>
<td valign="top" align="left">EU385194</td>
<td valign="top" align="left">EU385007</td>
<td valign="top" align="left">EU385481</td>
<td valign="top" align="left">EU385100</td>
<td valign="top" align="left">EU841307</td>
<td valign="top" align="left">FJ979693</td>
<td valign="top" align="left">FJ979744</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Plazia daphnoides</italic></td>
<td valign="top" align="left">Simon 536</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">EF530226</td>
<td valign="top" align="left">EU385388</td>
<td valign="top" align="left">EU385197</td>
<td valign="top" align="left">EU385010</td>
<td valign="top" align="left">EU385484</td>
<td valign="top" align="left">EU385103</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Proustia cuneifolia</italic></td>
<td valign="top" align="left">Simon 511</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">EU841168</td>
<td valign="top" align="left">EU385390</td>
<td valign="top" align="left">EU385199</td>
<td valign="top" align="left">EU385012</td>
<td valign="top" align="left">EU385486</td>
<td valign="top" align="left">EU385105</td>
<td valign="top" align="left">EU841301</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Schlechtendalia luzulifolia</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">KF989506</td>
<td valign="top" align="left">KF989833</td>
<td valign="top" align="left">L39395</td>
<td valign="top" align="left">EU841125</td>
<td valign="top" align="left">KM191889</td>
<td valign="top" align="left">KF989612</td>
<td valign="top" align="left">EU841300</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Stenopadus talaumifolius</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">KF989518</td>
<td valign="top" align="left">KF989846</td>
<td valign="top" align="left">EU385207</td>
<td valign="top" align="left">EU385019</td>
<td valign="top" align="left">EU385494</td>
<td valign="top" align="left">KF989624</td>
<td valign="top" align="left">KF989935</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Stifftia chrysantha</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">KF989519</td>
<td valign="top" align="left">EU385399</td>
<td valign="top" align="left">EU385208</td>
<td valign="top" align="left">EU385020</td>
<td valign="top" align="left">EU385495</td>
<td valign="top" align="left">JF920296</td>
<td valign="top" align="left">JF920291</td>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Stomatochaeta condensata</italic></td>
<td/>
<td/>
<td/>
<td/>
<td valign="top" align="left">EU385401</td>
<td valign="top" align="left">EU385210</td>
<td valign="top" align="left">EU385021</td>
<td valign="top" align="left">EU385497</td>
<td valign="top" align="left">EU385116</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Trichocline boecheri</italic></td>
<td valign="top" align="left">Bonifacino 142</td>
<td valign="top" align="left">Argentina</td>
<td valign="top" align="left">US.</td>
<td valign="top" align="left">GU126792</td>
<td valign="top" align="left">EU385404</td>
<td valign="top" align="left">EU385213</td>
<td valign="top" align="left">EU385024</td>
<td valign="top" align="left">EU385500</td>
<td valign="top" align="left">EU385119</td>
<td/>
<td valign="top" align="left">GU126767</td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Trixis divaricata</italic></td>
<td valign="top" align="left">Santos 2659</td>
<td valign="top" align="left">Brazil</td>
<td valign="top" align="left">TEX.</td>
<td/>
<td valign="top" align="left">EU385405</td>
<td valign="top" align="left">EU385214</td>
<td valign="top" align="left">EU385025</td>
<td valign="top" align="left">EU385501</td>
<td valign="top" align="left">EU385120</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Urmenetea atacamensis</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">EF530231</td>
<td valign="top" align="left">GQ890334</td>
<td valign="top" align="left">GQ890340</td>
<td valign="top" align="left">GQ890343</td>
<td valign="top" align="left">GQ890346</td>
<td valign="top" align="left">EF530277</td>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left"><italic>Wunderlichia mirabilis</italic></td>
<td/>
<td/>
<td/>
<td valign="top" align="left">DQ414742</td>
<td valign="top" align="left">EU385408</td>
<td valign="top" align="left">EU385217</td>
<td valign="top" align="left">EU385028</td>
<td valign="top" align="left">EU385504</td>
<td valign="top" align="left">DQ414744</td>
<td valign="top" align="left">KF989938</td>
<td/>
<td/>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec>
<title>DNA extraction, amplification, and sequencing</title>
<p>Total genomic DNA was isolated from silica-dried leaf materials and herbarium specimens using a Universal Genomic DNA Extraction Kit (Takara, Dalian, China). Nine gene regions, including eight plastid DNA regions (<italic>ndhF, matK, rpoB, rbcL, trnL-F, rpl32-trnL, rpl32-ndhF</italic>, and <italic>psbA-trnH</italic>) and the nuclear ITS, were employed. According to Shaw et al. (<xref ref-type="bibr" rid="B43">2007</xref>) and Timme et al. (<xref ref-type="bibr" rid="B50">2007</xref>), both <italic>rpl32-trnL</italic> and <italic>rpl32-ndhF</italic> have faster molecular evolution rate than other chloroplast regions and can provide adequate resolution in phylogenetic reconstructions of Asteraceae. The ITS data were generated from single amplifications using primers ITS4 and ITS5 (White et al., <xref ref-type="bibr" rid="B53">1990</xref>). Primers used for amplification and sequencing were tabe and tabf for <italic>trnL-F</italic> region (Taberlet et al., <xref ref-type="bibr" rid="B46">1991</xref>), Z1 and 1204R for <italic>rbcL</italic> (Zurawski et al., <xref ref-type="bibr" rid="B55">1981</xref>), and <italic>psb</italic>A<italic>_</italic>F and <italic>trn</italic>H_R for <italic>psbA-trnH</italic> intergenic spacer (Sang et al., <xref ref-type="bibr" rid="B42">1997</xref>). The primer sets for <italic>ndhF, matK</italic>, and <italic>rpoB</italic> regions were from Panero and Funk (<xref ref-type="bibr" rid="B36">2008</xref>), while the primers for <italic>rpl</italic>32-<italic>trn</italic>L and <italic>rpl</italic>32-<italic>ndh</italic>F were from Shaw et al. (<xref ref-type="bibr" rid="B43">2007</xref>). Amplified products were purified using a Qiaquick gel extraction kit (Qiagen, Inc., Valencia, California, USA) and sequenced in both directions by an ABI 3730 automated sequencer (Applied Biosystems, Foster City, California, USA). The resulting sequences were edited using Sequencher (version 4.1.4) and aligned with MUSCLE (version 3.6; Edgar, <xref ref-type="bibr" rid="B18">2004</xref>), followed by manual adjustment in Se-Al (v2.0a11; Rambaut, <xref ref-type="bibr" rid="B38">2002</xref>). All sequences generated for this study were deposited in GenBank under accession numbers shown in Table <xref ref-type="table" rid="T1">1</xref>.</p>
</sec>
<sec>
<title>Phylogenetic analysis</title>
<p>The nuclear and the plastid datasets were analyzed both separately and simultaneously using maximum parsimony (MP), Bayesian inference (BI), and maximum likelihood (ML). The topologies of the data sets were compared with each other to detect any incongruence. Because no significant incongruence was observed, we chose to combine the nrDNA and cpDNA data sets. For the maximum parsimony analysis we used PAUP/(version 4.0b10; Swofford, <xref ref-type="bibr" rid="B45">2003</xref>). All characters were weighted equally and unordered. Heuristic searches were conducted using 100 random-taxon-addition replicates with tree bisection-reconnection (TBR) branch swapping, using MulTrees option in effect, and a maximum of 10,000 trees. Bootstrap analyses (1,000 pseudoreplicates) were conducted to examine the relative level of support for individual clades on the cladograms of each search (Felsenstein, <xref ref-type="bibr" rid="B19">1985</xref>).</p>
<p>Models of nucleotide substitution were selected based on the Akaike Information Criterion (AIC) as determined by MrModelTest (version 2.3; Nylander, <xref ref-type="bibr" rid="B33">2004</xref>). Maximum-likelihood searches and bootstrap analyses were performed on the XSEDE online computing cluster accessed via the CIPRES Science Gateway (Miller et al., <xref ref-type="bibr" rid="B28">2010</xref>) using RAxML-HPC2 (version 7.4.2; Stamatakis et al., <xref ref-type="bibr" rid="B44">2008</xref>). Data were partitioned into gene regions, allowing for independent parameter estimates on each partition, with branch length estimates optimized across all gene regions. The GTR &#x0002B; &#x00393; model was employed for all analyses.</p>
<p>Bayesian inference was conducted using MrBayes (version 3.2.2, Ronquist and Huelsenbeck, <xref ref-type="bibr" rid="B41">2003</xref>). The Markov chain Monte Carlo (MCMC) algorithm was run for 10,000,000 generations with one cold and three heated chains, starting from random trees and sampling one out of every 1,000 generations. The burn-in and convergence diagnostics were graphically assessed using AWTY (Nylander et al., <xref ref-type="bibr" rid="B34">2008</xref>). The burn-in trees were excluded, and the remaining trees were assumed to be representative of the posterior probability (PP) distribution.</p>
</sec>
<sec>
<title>Divergence time estimation</title>
<p>The combined nuclear and plastid sequences were used to estimate the divergence time of <italic>Adenocaulon</italic> using BEAST (version 1.8.0; Drummond and Rambaut, <xref ref-type="bibr" rid="B17">2007</xref>). BEAST employs a Bayesian MCMC approach to co-estimate topology, substitution rates and node ages (Drummond et al., <xref ref-type="bibr" rid="B16">2002</xref>). BEAUti was used to set criteria for the analysis, in which we applied a general time reversible (GTR) nucleotide-substitution model with Gamma &#x0002B; Invariant sites, gamma shape distribution (with four categories) and proportion of invariant sites. A Yule tree prior model was implemented in the analysis, with rate variation across branches assumed to be uncorrelated and lognormally distributed (Drummond et al., <xref ref-type="bibr" rid="B15">2006</xref>). Posterior distributions of parameters were approximated using two independent MCMC analyses of 50,000,000 generations (sampling once for every 5,000 generations) after a 10% burn-in for each. Convergence of the chains was checked using Tracer (version 1.5; Rambaut and Drummond, <xref ref-type="bibr" rid="B39">2007</xref>).</p>
<p>For the fossil calibrations, we followed the strategy adopted by Nie et al. (<xref ref-type="bibr" rid="B32">2016</xref>). The first calibration point was the <italic>Raiguenrayun cura</italic> Barreda, Katinas, Passalia &#x00026; Palazzesi capitulescence from the Patagonia described as belonging to the crown Asteraceae and dated by radiometric methods at 47.5 Ma (von Nickisch-Rosenegk et al., <xref ref-type="bibr" rid="B51">1999</xref>). This fossil was used as a minimum age constraint for the split between Barnadesioideae and the rest of family and with an applied lognormal prior distribution with an offset of 47.5 Ma, a mean of 1.0 and a standard deviation of 0.7. As a minimum age constraint for the crown group of the subfamily Barnadesioideae, we used the fossil pollen <italic>Quilembaypollis</italic> sp., from the latest Oligocene/earliest Miocene, dated at 23 Ma (Chiang et al., <xref ref-type="bibr" rid="B10">1998</xref>). Following Bergh and Linder (<xref ref-type="bibr" rid="B3">2009</xref>), the 95% confidence interval for this prior lies between 16.9 and 44.1 Ma with the mean at 22.3 Ma.</p>
</sec>
<sec>
<title>Biogeographic analyses</title>
<p>We compiled distribution data for the <italic>Adenocaulon</italic> species and assigned the included taxa to respective ranges. Considering the areas of endemism in <italic>Adenocaulon</italic> and tectonic history of continents, we used four areas for the <italic>Adenocaulon</italic> taxa: (A) South America, (B) Central America, (C) North America, and (D) East Asia. Each sample was assigned to its respective area according to its contemporary distribution range.</p>
<p>Biogeographic inferences were obtained by applying both statistical dispersal&#x02013;vicariance analysis (S-DIVA) and dispersal-extinction-cladogenesis (DEC) model calculated by Lagrange (Ree and Smith, <xref ref-type="bibr" rid="B40">2008</xref>) implemented in RASP (version 3.0) using the default settings (Yu et al., <xref ref-type="bibr" rid="B54">2010</xref>). A subset of 1,000 randomly selected trees from the posterior distribution output of BEAST was used and the maximum number of individual unit areas was set to two. The probability of dispersal between areas was maintained as equal.</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<sec>
<title>Phylogenetic analyses</title>
<p>The incongruence length difference and Shimodaira and Hasegawa (SH) tests failed to reveal significant incongruence, allowing the individual datasets to be combined. There were 12,416 characters of combined data set, of which 1,571 were variable, and 1,266 parsimony informative sites. In general, the combined data matrix provided greater resolution and stronger support for phylogenetic relationships than did the individual datasets (Figure <xref ref-type="fig" rid="F2">2</xref>).</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>Phylogeny of the basal grade of the Asteraceae, including Mutisioideae, Wunderlichioideae and Barnadesioideae, based on eight chloroplast DNA regions (<italic>ndhF, matK, rpoB, rbcL, trnL-F, rpl</italic>32-<italic>trn</italic>L, <italic>rpl</italic>32-<italic>ndhF</italic>, and <italic>psbA</italic>-<italic>trnH</italic>) and nuclear ITS. Numbers above the nodes are Bayesian posterior probabilities and below the nodes are bootstrap values obtained from MP analysis and posterior probabilities support values from ML analysis. &#x0201C;<sup>&#x0002A;</sup>&#x0201D; indicates full support for the respective analysis.</p></caption>
<graphic xlink:href="fevo-05-00162-g0002.tif"/>
</fig>
<p>The results from MP and BI analysis, as well as ML analysis, strongly support <italic>Adenocaulon</italic> being a monophyletic clade (PP &#x0003D; 100, BP &#x0003D; 100, PL &#x0003D; 100). Within <italic>Adenocaulon</italic>, the Central American species, <italic>A. lyratum</italic>, diverged first, followed by <italic>A. chilense</italic> being sister to a clade including the remaining species from North America and East Asia albeit with low support (PP &#x0003D; 64, BP &#x0003D; 54, PL &#x0003D; 85). The two species found in East Asia, <italic>A. himalaicum</italic> and <italic>A. nepalense</italic>, form a clade with high support values (PP &#x0003D; 100, BP &#x0003D; 93, PL &#x0003D; 98), which is sister to <italic>A. bicolor</italic> (North America) (Figure <xref ref-type="fig" rid="F2">2</xref>).</p>
</sec>
<sec>
<title>Biogeographic analysis</title>
<p>The chronogram and results of divergence-time estimation based on the nrDNA and cpDNA data showed that the crown age of <italic>Adenocaulon</italic> was estimated at 9.05 Ma with a 95% highest posterior density (HPD) of 4.73&#x02013;14.99 Ma. The stem age, that is the divergence time between <italic>Adenocaulon</italic> and its close relatives, was estimated at 14.74 Ma (with 95% HPD: 9.6&#x02013;23.7 Ma). The split between the South American species <italic>A. chilense</italic> from the remaining species of <italic>Adenocaulon</italic> was at 6.92 Ma (95%HPD: 3.55&#x02013;12.05 Ma), whilst the disjunction between North American <italic>A. bicolor</italic> and East Asian species at 4.79 Ma (95% HPD: 2.11&#x02013;8.68) (Figure <xref ref-type="fig" rid="F3">3</xref>). S-DIVA analysis demonstrated that <italic>Adenocaulon</italic> may have originated in the tropical America and then dispersed to North America and East Asia (Figure <xref ref-type="fig" rid="F3">3</xref>).</p>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p>The results of BEAST analysis and RASP ancestral area reconstruction analysis based on combined chloroplast DNA and nrITS. Blue bars represent the 95% highest posterior density intervals for node ages. Fossil calibrations are marked with black stars. Four areas of endemism are defined: A (blue), South America; B (purple), Central America; C (yellow), North America; D (red), eastern Asia. Pie charts show probabilities of ancestral area reconstructions.</p></caption>
<graphic xlink:href="fevo-05-00162-g0003.tif"/>
</fig>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<sec>
<title>Phylogenetic relationship of <italic>Adenocaulon</italic> with other genera within mutisieae</title>
<p>Our study showed that <italic>Adenocaulon</italic> is monophyletic within the Mutisieae (PP &#x0003D; 100, BP &#x0003D; 100, PL &#x0003D; 100) and is sister to a clade including <italic>Gerbera, Leibnitzia, Chaptalia, Trichocline</italic>, and <italic>Brachyclados</italic> (Figure <xref ref-type="fig" rid="F2">2</xref>). The genus is characterized by a distinct set of synapomorphy including basal constriction of anther appendages, small anthers, disciform capitula, and typical glandular achenes without pappus (Bittmann, <xref ref-type="bibr" rid="B5">1990</xref>). The placement of <italic>Adenocaulon</italic> has long been disputed among numerous taxonomists, going as far as calling it an anomalous genus, and being unplaced in the tribe (Bremer, <xref ref-type="bibr" rid="B6">1994</xref>). Based on our broad analysis of the early diverging clades of Asteraceae, <italic>Adenocaulon</italic> is confirmed to belong to the tribe Mutisieae (Mutisioideae) and to be sister to the <italic>Gerbera</italic>-complex (PP &#x0003D; 100, BP &#x0003D; 79, PL &#x0003D; 76) (Figure <xref ref-type="fig" rid="F2">2</xref>).</p>
<p>Our results indicate that the Central American <italic>A. lyratum</italic> diverged early. This species differs from the other four species in a stem winged by decurrently leaf bases, lyrate-pinnatifid sessile leaves and distinct club-shaped achene. Representatives of <italic>A. chilense</italic> from southern Chile and Argentina show petiolate entire leaves in a rosulate order. The pistillate flowers have a distinct bilabiate corolla and the scabrate pollen exhibit two layers of columellae with a larger inner one. The other three species from the Northern Hemisphere form a clade with high support. They share common features, e.g., leaves concentrated at the base, leaves triangular with cordate leaf base, heart- or kidney-shaped, with dentate or sinuate margin. Within this clade, the North American <italic>A. bicolor</italic> is sister to a clade with the two Asian species <italic>A. bicolor</italic> and <italic>A. himalaicum</italic>; these two species can be easily distinguished from each other by the glandular hairs: the former being pin-shaped, occurring on both vegetative and synflorescence branches, whereas the latter is nail-shaped but restricted to the synflorescence branches (Bittmann, <xref ref-type="bibr" rid="B5">1990</xref>). <italic>A. nepalense</italic> is a recently described new species (Bittmann, <xref ref-type="bibr" rid="B5">1990</xref>) endemic to Bhutan, Nepal, and India, and having distinct features such as winged by decurrently leaf-based stems and the bearing whip hairs achenes.</p>
</sec>
<sec>
<title>The origin and early dispersal of <italic>Adenocaulon</italic></title>
<p>Our biogeographic reconstruction suggests that <italic>Adenocaulon</italic> may have originated in Central America and then dispersed to North America and South America during the Miocene (14.74 Ma, 95% HPD: 9.6&#x02013;23.7) (Figure <xref ref-type="fig" rid="F3">3</xref>). The dispersal of biota between Central America, North America and South America (commonly called the Great American Biotic Interchange) is one of the most significant events in neotropical biogeography. The Great American Biotic Interchange was caused by the closure of the Isthmus of Panama ca. 3 Ma (Burnham and Graham, <xref ref-type="bibr" rid="B7">1999</xref>; Cody et al., <xref ref-type="bibr" rid="B11">2010</xref>), resulting in the exchange of plants and animals between the two once separated continents. However, some authors suggest that an earlier land connection made possible the exchange of biota within the Americas. A land bridge may have existed between North and South Americas 3&#x02013;7 Ma (Bermingham and Martin, <xref ref-type="bibr" rid="B4">1998</xref>). Moreover, some plants could have successfully crossed the Isthmus of Panama before it closed (Cody et al., <xref ref-type="bibr" rid="B11">2010</xref>; Bacon et al., <xref ref-type="bibr" rid="B1">2015</xref>). Here, we propose that <italic>Adenocaulon</italic> may have dispersed into South America from Central America during the Miocene via the land bridge link. Hypotheses of long distance dispersal events have gained popularity in the last decade as a way of explaining many disjunct distributions of plant lineages (Givnish et al., <xref ref-type="bibr" rid="B22">2004</xref>; Popp et al., <xref ref-type="bibr" rid="B37">2011</xref>; Nie et al., <xref ref-type="bibr" rid="B31">2013</xref>).</p>
<p>Dispersal of <italic>Adenocaulon</italic> may have been enhanced by birds due to its special fruit structures. The prominent glandular hairs on the cypselae are very sticky and cling readily to fabrics, fur, and feathers. The intercontinental disjunction within the range of <italic>Adenocaulon</italic> is possibly a result of dispersal of cypselae on the feathers of birds. The bird dispersal pattern may also account for the intracontinental disjunction of <italic>A. bicolor</italic> (in the Pacific Northwest, the Black Hills, and the northern Great Lakes region). Thus, we do not postulate vicariance as a factor that shaped the disjunct pattern of <italic>Adenocaulon</italic>.</p>
</sec>
<sec>
<title>The intercontinental dispersal within northern hemisphere</title>
<p>The intercontinental dispersal of plants in the Northern Hemisphere has been a focus of biogeography for a long time (Donoghue et al., <xref ref-type="bibr" rid="B13">2001</xref>; Donoghue and Smith, <xref ref-type="bibr" rid="B14">2004</xref>). During the Cenozoic, two routes for plant dispersal between the New World and the Old World were the Bering Land Bridge and the North Atlantic Land Bridge (Milne and Abbott, <xref ref-type="bibr" rid="B30">2002</xref>; Wen et al., <xref ref-type="bibr" rid="B52">2010</xref>). These two links have played significant roles in the formation of the modern flora of the Northern Hemisphere but happened in different geologic times (Tiffney, <xref ref-type="bibr" rid="B47">1985a</xref>,<xref ref-type="bibr" rid="B48">b</xref>). The Bering Land Bridge is assumed to have existed from the Paleocene to Miocene (Tiffney and Manchester, <xref ref-type="bibr" rid="B49">2001</xref>) but later this dispersal route was blocked due to global cooling (Milne, <xref ref-type="bibr" rid="B29">2006</xref>). We suggest that <italic>Adenocaulon</italic> most likely migrated from North America to East Asia via the Bering Land Bridge. The estimated divergence time between the North American and East Asian groups is ca. 11.91 Ma, which coincided the cooling of Northern Hemisphere in which the continuous distribution of the Boreotropical flora was disrupted (Tiffney and Manchester, <xref ref-type="bibr" rid="B49">2001</xref>). Our results suggest <italic>Adenocaulon</italic> may have originated in Central America, dispersed into North America and further into East Asia via the Bering Land Bridge, and finally reached the Himalayas.</p>
</sec>
<sec>
<title>Role of fruits in <italic>Adenocaulon</italic> dispersibility</title>
<p>Our results suggest that the biogeographic history of <italic>Adenocaulon</italic> species have been influenced by dispersal events, which could be facilitated by their unusual floral features. The pappus and the fruit trichome can prevent desiccation, and other characteristics of the family lack in <italic>Adenocaulon</italic>. Instead, the fruits of <italic>Adenocaulon</italic> are covered by glands with a sticky secretion. An umbrella-like &#x0201C;infructescence&#x0201D; emerges from the otherwise short plants usually embedded in other under-story vascular plants or mosses, and exposes the sticky fruits. Pervious researches indicated that viscid fruits can adhere by bird feathers (Carlquist, <xref ref-type="bibr" rid="B8">1967</xref>, <xref ref-type="bibr" rid="B9">1983</xref>). Also, the possibility that birds could have been the dispersal vectors for <italic>Adenocaulon</italic> fruits was proposed by Bittmann (<xref ref-type="bibr" rid="B5">1990</xref>) to explain some of the extant distributions of the genus. Alternatively, successful over-water dispersal events could be postulated for <italic>Adenocaulon</italic>; the oily fruit cover is suggested to aid in flotation, as was the case for other families. Thus, the absence of pappus in <italic>Adenocaulon</italic> does not mean that this genus lacks mechanisms for dispersal. The sticky fruits, with the &#x0201C;infructescence,&#x0201D; can act as an alternative dispersal mechanism involving several potential dispersal vectors.</p>
</sec>
</sec>
<sec id="s5">
<title>Author contributions</title>
<p>HS: conceived this research project; TD, YC, HW, XZ, SV, ZY, and HQ: collected the data; TD and YC: analyzed the data; TD, YC, SV, HW, and HS: led the writing.</p>
<sec>
<title>Conflict of interest statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</sec>
</body>
<back>
<ack><p>This study was supported by the Major Program of National Natural Science Foundation of China (31590823) and the National Key R&#x00026;D Program of China (2017YFC0505200) to HS, and the National Natural Science Foundation of China (31700165) and CAS &#x0201C;Light of West China&#x0201D; Program to TD. We thank Dr. Jacob Landis of University of California, Riverside in English editing and Dr. Rinchen Yangzom of National Herbarium, National Biodiversity Center of Bhutan for providing leaf materials.</p>
</ack>
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