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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Genet.</journal-id>
<journal-title>Frontiers in Genetics</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Genet.</abbrev-journal-title>
<issn pub-type="epub">1664-8021</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fgene.2018.00669</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Genetics</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Mitochondrial Neurogastrointestinal Encephalomyopathy: Into the Fourth Decade, What We Have Learned So Far</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Pacitti</surname> <given-names>Dario</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/613148/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Levene</surname> <given-names>Michelle</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/613134/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Garone</surname> <given-names>Caterina</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/613940/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Nirmalananthan</surname> <given-names>Niranjanan</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/142966/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Bax</surname> <given-names>Bridget E.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/586964/overview"/>
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<aff id="aff1"><sup>1</sup><institution>Molecular and Clinical Sciences Research Institute, St George&#x00027;s, University of London</institution>, <addr-line>London</addr-line>, <country>United Kingdom</country></aff>
<aff id="aff2"><sup>2</sup><institution>MRC Mitochondrial Biology Unit, Cambridge Biomedical</institution>, <addr-line>Cambridge</addr-line>, <country>United Kingdom</country></aff>
<aff id="aff3"><sup>3</sup><institution>St George&#x00027;s University Hospitals NHS Foundation Trust</institution>, <addr-line>London</addr-line>, <country>United Kingdom</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Enrico Baruffini, Universit&#x000E0; degli Studi di Parma, Italy</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Raffaele Lodi, University of Bologna, Italy; Theodora Katsila, University of Patras, Greece</p></fn>
<corresp id="c001">&#x0002A;Correspondence: Bridget E. Bax <email>bebax&#x00040;sgul.ac.uk</email></corresp>
<fn fn-type="other" id="fn001"><p>This article was submitted to Genetic Disorders, a section of the journal Frontiers in Genetics</p></fn></author-notes>
<pub-date pub-type="epub">
<day>21</day>
<month>12</month>
<year>2018</year>
</pub-date>
<pub-date pub-type="collection">
<year>2018</year>
</pub-date>
<volume>9</volume>
<elocation-id>669</elocation-id>
<history>
<date date-type="received">
<day>14</day>
<month>09</month>
<year>2018</year>
</date>
<date date-type="accepted">
<day>04</day>
<month>12</month>
<year>2018</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2018 Pacitti, Levene, Garone, Nirmalananthan and Bax.</copyright-statement>
<copyright-year>2018</copyright-year>
<copyright-holder>Pacitti, Levene, Garone, Nirmalananthan and Bax</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract><p>Mitochondrial neurogastrointestinal encephalomyopathy (MNGIE) is an ultra-rare metabolic autosomal recessive disease, caused by mutations in the nuclear gene <italic>TYMP</italic> which encodes the enzyme thymidine phosphorylase. The resulting enzyme deficiency leads to a systemic accumulation of the deoxyribonucleosides thymidine and deoxyuridine, and ultimately mitochondrial failure due to a progressive acquisition of secondary mitochondrial DNA (mtDNA) mutations and mtDNA depletion. Clinically, MNGIE is characterized by gastrointestinal and neurological manifestations, including cachexia, gastrointestinal dysmotility, peripheral neuropathy, leukoencephalopathy, ophthalmoplegia and ptosis. The disease is progressively degenerative and leads to death at an average age of 37.6 years. As with the vast majority of rare diseases, patients with MNGIE face a number of unmet needs related to diagnostic delays, a lack of approved therapies, and non-specific clinical management. We provide here a comprehensive collation of the available knowledge of MNGIE since the disease was first described 42 years ago. This review includes symptomatology, diagnostic procedures and hurdles, <italic>in vitro</italic> and <italic>in vivo</italic> disease models that have enhanced our understanding of the disease pathology, and finally experimental therapeutic approaches under development. The ultimate aim of this review is to increase clinical awareness of MNGIE, thereby reducing diagnostic delay and improving patient access to putative treatments under investigation.</p></abstract>
<kwd-group>
<kwd>MNGIE</kwd>
<kwd>thymidine phosphorylase</kwd>
<kwd>mitochondrial disease</kwd>
<kwd>rare disease</kwd>
<kwd>deoxyribonucleoside</kwd>
<kwd>TYMP</kwd>
<kwd>mitochondrial DNA</kwd>
<kwd>mitochondrial neurogastrointestinal encephalomyopathy</kwd>
</kwd-group>
<contract-sponsor id="cn001">Medical Research Council<named-content content-type="fundref-id">10.13039/501100000265</named-content></contract-sponsor> <counts>
<fig-count count="7"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="168"/>
<page-count count="22"/>
<word-count count="16966"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Disease Name and Synonyms</title>
<p>Mitochondrial neurogastrointestinal encephalomyopathy (MNGIE, Online Mendelian inheritance in Man &#x00023;603041, Genome Database accession &#x00023;9835128) is a fatal inherited metabolic disorder caused by mutations in a nuclear gene controlling the metabolism of pyrimidine deoxyribonucleosides and indirectly influencing the replication and expression of the mitochondrial genome (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>; Hirano et al., <xref ref-type="bibr" rid="B60">2004b</xref>). In the past, the disorder has also been referred to as:</p>
<list list-type="bullet">
<list-item><p>Congenital oculoskeletal myopathy</p></list-item>
<list-item><p>Mitochondrial myopathy with sensorimotor polyneuropathy, ophthalmoplegia, and pseudo-obstruction (MEPOP)</p></list-item>
<list-item><p>Mitochondrial neurogastrointestinal encephalopathy syndrome</p></list-item>
<list-item><p>Myoneurogastrointestinal encephalopathy syndrome</p></list-item>
<list-item><p>Chronic intestinal pseudo-obstruction with myopathy and ophthalmoplegia</p></list-item>
<list-item><p>Polyneuropathy, ophthalmoplegia, leukoencephalopathy and intestinal pseudo-obstruction (POLIP);</p></list-item>
<list-item><p>Oculogastrointestinal encephalopathy syndrome; Oculogastrointestinal muscular distrophy (OGIDM)</p></list-item>
<list-item><p>Thymidine phosphorylase deficiency</p></list-item>
</list>
</sec>
<sec id="s2">
<title>History</title>
<p>The condition was first described in 1976 by Okamura et al., who reported a 22-year old cachectic man experiencing ptosis, ophthalmoplegia, dysphagia and myopathy. Histological findings revealed mitochondrial abnormalities in skeletal muscles and liver cells. The authors recognized that the condition exhibited familial tendencies and therefore proposed the term congenital oculoskeletal myopathy to describe the disorder (Okamura et al., <xref ref-type="bibr" rid="B109">1976</xref>). Analogous patients with ocular, neurological, skeletal, and gastrointestinal involvement were additionally described in the literature, and Bardosi et al. also reported leukoencephalopathy in a patient with a history of extraocular and skeletal myopathy and gastrointestinal symptoms (Anuras et al., <xref ref-type="bibr" rid="B2">1983</xref>; Ionasescu, <xref ref-type="bibr" rid="B64">1983</xref>; Ionasescu et al., <xref ref-type="bibr" rid="B65">1983</xref>, <xref ref-type="bibr" rid="B66">1984</xref>; Bardosi et al., <xref ref-type="bibr" rid="B8">1987</xref>; Faber et al., <xref ref-type="bibr" rid="B34">1987</xref>; Simon et al., <xref ref-type="bibr" rid="B136">1990</xref>). In 1994, Hirano et al. conducted a systematic review of all reported cases of the condition and proposed the current nomenclature mitochondrial neurogastrointestinal encephalomyopathy (MNGIE), which highlighted the central features of this mitochondrial disorder (Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>). The etiology was only elucidated in 1999, when the condition was attributed to a deficiency in thymidine phosphorylase, E.C.2.4.2.4 (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>).</p>
</sec>
<sec id="s3">
<title>Molecular Etiology</title>
<p>Mutations in the <italic>TYMP</italic> gene and a subsequent deficiency in thymidine phosphorylase activity are the causative factors in the pathogenesis of MNGIE. Thymidine phosphorylase is also referred to as gliostatin and platelet derived-endothelial cell growth factor (PD-ECGF). Structurally the peptide is composed of two subunit homodimers each with a molecular weight of &#x0007E;50 kilodaltons (Norman et al., <xref ref-type="bibr" rid="B107">2004</xref>). Thymidine phosphorylase catalyses the reversible phosphorylation of thymidine (also known as deoxythymidine) and deoxyuridine to 2-deoxyribose 1-phosphate and their respective bases, thymine and uracil, Figure <xref ref-type="fig" rid="F1">1</xref> (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>). Thymidine phosphorylase has a pivotal role in the nucleoside salvage metabolic pathway, and in the recycling of pyrimidine bases by regulating the availability of thymidine for DNA biosynthesis (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>; Levene et al., <xref ref-type="bibr" rid="B79">2013</xref>).</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p>Reactions catalysed by thymidine phosphorylase.</p></caption>
<graphic xlink:href="fgene-09-00669-g0001.tif"/>
</fig>
<p>Mitochondrial deoxyribonucleoside pools are maintained by both the cytoplasmic <italic>de novo</italic> pathway and the salvage pathway located within the mitochondrion, Figure <xref ref-type="fig" rid="F2">2</xref>. In proliferating cells, the major source of mitochondrial deoxyribonucleotide diphosphates originates from the cytoplasmic <italic>de novo</italic> pathway, whereby a transporter located in the mitochondrial membrane transports the deoxyribonucleotide triphosphates (dNTPs) synthesized in the cytosol into the mitochondrial matrix for the synthesis of mtDNA. In quiescent cells (such as muscles and neurons) the cytoplasmic <italic>de novo</italic> pathway is no longer required for nuclear DNA replication and is thus down-regulated due to a reduction in ribonucleotide reductase activity, leading to a marked reduction in cytosolic dNTP pools (R&#x000F6;tig and Poulton, <xref ref-type="bibr" rid="B126">2009</xref>). mtDNA synthesis is not limited to the S-phase of the cell cycle and mitochondria are continuously replicating, even in post-mitotic cells. Therefore, a constant supply of nucleotides is essential for the maintenance of the mitochondrial genome and hence the salvage pathway becomes important. The loss of function of thymidine phosphorylase leads to an enhancement of thymidine salvage through the action of thymidine kinase 2 (TK2) which is constitutively expressed in the mitochondria. Of note, thymidine kinase 1 (TK1) is upregulated only in proliferating cells. TK2 converts thymidine to thymidine monophosphate, as well as deoxyuridine and deoxycytidine to their respective monophosphate nucleotides, and is therefore believed to contribute to the generation of the deoxynucleotide pool imbalances in the mitochondria (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>; Hirano et al., <xref ref-type="bibr" rid="B60">2004b</xref>).</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>Deoxynucleotide salvage and <italic>de-novo</italic> synthesis pathways. Abbreviations are as follows: deoxythymidine (dThd), deoxyuridine (dUrd), deoxythymidine monophosphate (dTMP), deoxythymidine diphosphate (dTDP), deoxynucleotidase 1 (dNT1), thymidine phosphorylase (TP), thymidine kinase 1 (TK1), deoxynucleotidase 2 (dNT2), nucleotide monophosphate kinase (NMPK), nucleotide diphosphate kinase (NDPK), deoxythymidine triphosphate (dTTP), thymidine kinase 2 (TK2), DNA polymerase Y (DNA pol Y), nucleotide diphosphate (NDP), ribonucleotide reductase (RNR), deoxyribonucleotide diphosphate (dNDP), and deoxynucleotide triphosphate (dNTP).</p></caption>
<graphic xlink:href="fgene-09-00669-g0002.tif"/>
</fig>
<p>Since thymidine phosphorylase is crucial in the pyrimidine metabolic pathway for the catabolism of thymidine, its dysfunction compromises the deoxyribonucleoside pool balance. It is observed that the tissues affected in MNGIE are predominantly post-mitotic (Samsonoff et al., <xref ref-type="bibr" rid="B130">1997</xref>; Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>; Pontarin et al., <xref ref-type="bibr" rid="B119">2006</xref>; Zhou et al., <xref ref-type="bibr" rid="B166">2008</xref>; Balasubramaniam et al., <xref ref-type="bibr" rid="B6">2014</xref>). Consequently, because of the deoxyribonucleoside pool imbalance, combined with the limited ability of the mitochondrial DNA polymerase &#x003B3; to repair DNA, mtDNA gradually accumulates mutations over time, which ultimately leads to the failure of mitochondria to perform oxidative phosphorylation, Figure <xref ref-type="fig" rid="F3">3</xref> (Bogenhagen, <xref ref-type="bibr" rid="B15">1999</xref>; Nishigaki et al., <xref ref-type="bibr" rid="B103">2004</xref>).</p>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p>Metabolic defect in MNGIE.</p></caption>
<graphic xlink:href="fgene-09-00669-g0003.tif"/>
</fig>
<p>In MNGIE, phenotypic manifestations of the disease develop when a threshold level of mutant mtDNA is reached, which is generally when more than 80&#x02013;90% of total mitochondria are affected (Mazat et al., <xref ref-type="bibr" rid="B90">2001</xref>; Nishigaki et al., <xref ref-type="bibr" rid="B102">2003</xref>). This threshold effect and the heteroplasmic nature of mitochondria (the existence of two or more mitochondrial genotypes within the same cell) very likely account for the protracted interval before the condition manifests and contributes to the heterogeneous phenotypes observed.</p>
<p>In humans thymidine phosphorylase is abundantly expressed in blood cells (platelets, macrophages, peripheral lymphocytes, stromal cells, and reticulocytes), liver, lungs, brain and tissues of the digestive tract; however it is not expressed in skeletal muscle, kidneys or adipose tissue (Fox et al., <xref ref-type="bibr" rid="B42">1995</xref>). In addition to its enzymatic activity driving the salvage pathway, thymidine phosphorylase also functions as a signaling molecule playing an essential role in a number of processes (Li and Yue, <xref ref-type="bibr" rid="B81">2017</xref>). Thymidine phosphorylase acts as a growth factor with strong pro-angiogenic effects and is a potent mitogen for endothelial cells (Miyazono et al., <xref ref-type="bibr" rid="B93">1987</xref>; O&#x00027;Brien et al., <xref ref-type="bibr" rid="B108">1996</xref>). In addition it has been demonstrated that thymidine phosphorylase is an inhibitor of apoptosis (Li and Yue, <xref ref-type="bibr" rid="B81">2017</xref>). Platelets are a major source of thymidine phosphorylase, and it has been shown that the protein is involved in platelet activation through exhibiting a potent pro-thrombotic effect (Miyazono et al., <xref ref-type="bibr" rid="B93">1987</xref>; Li and Yue, <xref ref-type="bibr" rid="B81">2017</xref>). Moreover, thymidine phosphorylase shows a strong inhibitory effect on all glial cells and has been demonstrated to exert a neurotrophic effect on cortical neurons (Asai et al., <xref ref-type="bibr" rid="B3">1992a</xref>,<xref ref-type="bibr" rid="B4">b</xref>; Ueki et al., <xref ref-type="bibr" rid="B151">1993</xref>).</p>
<p>A deficiency in enzymatic activity (&#x0003C;5% of healthy individuals) results in elevated concentrations of thymidine and deoxyuridine in tissues and body fluids, which consequently generate deoxyribonucleoside pool imbalances, leading to impaired mtDNA replication, and ultimately mitochondrial failure (Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>; Spinazzola et al., <xref ref-type="bibr" rid="B140">2002</xref>; Mart&#x000ED; et al., <xref ref-type="bibr" rid="B84">2003</xref>; Valentino et al., <xref ref-type="bibr" rid="B152">2007</xref>). In patients with MNGIE, deoxyribonucleoside concentrations can reach plasma levels of 3.9&#x02013;17.7 &#x003BC;mol/L for thymidine and 5.5&#x02013;24.4 &#x003BC;mol/L for deoxyuridine, compared to undetectable levels in healthy unaffected individuals (Hirano et al., <xref ref-type="bibr" rid="B57">1998</xref>; Mart&#x000ED; et al., <xref ref-type="bibr" rid="B84">2003</xref>). In tissues such as the small intestine, kidney, liver, peripheral nerve, and occipital white matter, levels in the range of 38&#x02013;1532 nmoles/g protein for thymidine and 32&#x02013;728 nmoles/g protein for deoxyuridine have been reported (Valentino et al., <xref ref-type="bibr" rid="B152">2007</xref>). Thymidine and deoxyuridine are ultra-filterable, and thus the systemic accumulation of thymidine and deoxyuridine is further exacerbated by the efficiency of renal reabsorption of these deoxyribonucleosides (Okamura et al., <xref ref-type="bibr" rid="B109">1976</xref>; Hirano et al., <xref ref-type="bibr" rid="B57">1998</xref>; Spinazzola et al., <xref ref-type="bibr" rid="B140">2002</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>).</p>
<sec>
<title>Disease-Causing Mutations</title>
<sec>
<title><italic>TYMP</italic> Mutations</title>
<p>The <italic>TYMP</italic> gene has been mapped to the chromosomal locus 22q13.32-qter (Hirano et al., <xref ref-type="bibr" rid="B57">1998</xref>; Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>, <xref ref-type="bibr" rid="B106">2000</xref>). Since the identification of <italic>TYMP</italic> as the gene responsible for MNGIE, 92 different mutations have been reported by the Human Gene Mutation Database (HGMD Professional 2018.2, accessed September 2018) (Stenson et al., <xref ref-type="bibr" rid="B141">2014</xref>), including 56 missense/nonsense (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>, <xref ref-type="bibr" rid="B106">2000</xref>; Gamez et al., <xref ref-type="bibr" rid="B43">2002</xref>; Kocaefe et al., <xref ref-type="bibr" rid="B72">2003</xref>; Hirano et al., <xref ref-type="bibr" rid="B60">2004b</xref>; Mart&#x000ED;n et al., <xref ref-type="bibr" rid="B87">2004</xref>; Marti et al., <xref ref-type="bibr" rid="B86">2005</xref>; Said et al., <xref ref-type="bibr" rid="B129">2005</xref>; Slama et al., <xref ref-type="bibr" rid="B138">2005</xref>; Carod-Artal et al., <xref ref-type="bibr" rid="B20">2007</xref>; Schupbach et al., <xref ref-type="bibr" rid="B134">2007</xref>; Monroy et al., <xref ref-type="bibr" rid="B95">2008</xref>; Massa et al., <xref ref-type="bibr" rid="B89">2009</xref>; Poulton et al., <xref ref-type="bibr" rid="B121">2009</xref>; Bari&#x0015F; et al., <xref ref-type="bibr" rid="B9">2010</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>; Nalini and Gayathri, <xref ref-type="bibr" rid="B100">2011</xref>; Scarpelli et al., <xref ref-type="bibr" rid="B133">2012</xref>; Mihaylova et al., <xref ref-type="bibr" rid="B91">2013</xref>; Suh et al., <xref ref-type="bibr" rid="B142">2013</xref>; Benureau et al., <xref ref-type="bibr" rid="B13">2014</xref>; Vondr&#x000E1;ckov&#x000E1; et al., <xref ref-type="bibr" rid="B156">2014</xref>; Peedikayil et al., <xref ref-type="bibr" rid="B115">2015</xref>; Wang et al., <xref ref-type="bibr" rid="B159">2015</xref>; Karyampudi et al., <xref ref-type="bibr" rid="B69">2016</xref>), 13 splice site mutations (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>, <xref ref-type="bibr" rid="B106">2000</xref>; Kocaefe et al., <xref ref-type="bibr" rid="B72">2003</xref>; Szigeti et al., <xref ref-type="bibr" rid="B145">2004b</xref>; Slama et al., <xref ref-type="bibr" rid="B138">2005</xref>; Laforce et al., <xref ref-type="bibr" rid="B76">2009</xref>; Taanman et al., <xref ref-type="bibr" rid="B146">2009</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>; Libernini et al., <xref ref-type="bibr" rid="B82">2012</xref>; Halter et al., <xref ref-type="bibr" rid="B55">2015</xref>), 13 small deletions (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>, <xref ref-type="bibr" rid="B106">2000</xref>; Blazquez et al., <xref ref-type="bibr" rid="B14">2005</xref>; Slama et al., <xref ref-type="bibr" rid="B138">2005</xref>; Poulton et al., <xref ref-type="bibr" rid="B121">2009</xref>; Filosto et al., <xref ref-type="bibr" rid="B39">2011</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>; Torres-Torronteras et al., <xref ref-type="bibr" rid="B149">2011</xref>; Halter et al., <xref ref-type="bibr" rid="B55">2015</xref>; Karyampudi et al., <xref ref-type="bibr" rid="B69">2016</xref>), 6 small insertions (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>; Gamez et al., <xref ref-type="bibr" rid="B43">2002</xref>; Hirano et al., <xref ref-type="bibr" rid="B60">2004b</xref>; Kintarak et al., <xref ref-type="bibr" rid="B71">2007</xref>; Poulton et al., <xref ref-type="bibr" rid="B121">2009</xref>; Cardaioli et al., <xref ref-type="bibr" rid="B19">2010</xref>), 2 small indels (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>; Libernini et al., <xref ref-type="bibr" rid="B82">2012</xref>) 1 gross insertion (Wang et al., <xref ref-type="bibr" rid="B158">2017</xref>) and 1 gross deletion (Vondr&#x000E1;ckov&#x000E1; et al., <xref ref-type="bibr" rid="B156">2014</xref>). These mutations have been mapped to either exonic or intronic regions, with some identified as benign and some as pathogenic variants. Figure <xref ref-type="fig" rid="F4">4</xref> summarizes the known pathogenic variants associated with MNGIE, based on their classification and location on the <italic>TYMP</italic> gene.</p>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p>Pathogenic <italic>TYMP</italic> gene mutations (NM_001113755.2; NP_001107227) in exonic and intronic regions. Protein changes, where known are indicated in red font.</p></caption>
<graphic xlink:href="fgene-09-00669-g0004.tif"/>
</fig>
<p>The mutation distribution suggests founder effects for some mutations such as c.866A&#x0003E;G in Europeans and c. 518T&#x0003E;G in individual from the Dominican Republic (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>).</p>
</sec>
<sec>
<title>Effect on Mitochondrial DNA</title>
<p>The secondary mtDNA mutations reported in MNGIE, are caused by the toxic accumulations of thymidine and deoxyuridine, because of the nuclear <italic>TYMP</italic> mutations. These secondary mutations have been identified as mtDNA deletions, depletion and misincorporations. Acquired secondary mitochondrial mutations appear to be conserved in most cases, with 86% of detected mutations being T&#x0003E;C transitions preceded by a short run of As. This can be explained by a competition between guanosine monophosphate (GMP) and adenosine monophosphate (AMP) for incorporation opposite to a thymine residue on the template DNA. After the occurrence of misincorporations, elevated thymidine triphosphate (TTP) levels accelerate polymerase &#x003B3; exonuclease removal of mismatches, so that the T is switched to C during mtDNA replication; these mutations ultimately lead to failure of oxidative phosphorylation (Nishigaki et al., <xref ref-type="bibr" rid="B102">2003</xref>). Certain mtDNA genes appear to be hotspots for mutations in MNGIE, such as the <italic>ND5</italic> gene which is prone to multiple deletions (Nishigaki et al., <xref ref-type="bibr" rid="B103">2004</xref>). Gonzalez-Vioque et al. proposed a hypothesis for the mtDNA depletion observed in MNGIE, suggesting that mitochondrial replication is not affected by the accumulation of nucleosides <italic>per se</italic>, but rather by the secondary depletion of deoxycytidine stemming from an increase in TTP pools, thus limiting its availability for mtDNA biosynthesis (Gonz&#x000E1;lez-Vioque et al., <xref ref-type="bibr" rid="B50">2011</xref>).</p>
</sec>
</sec>
</sec>
<sec id="s4">
<title>Epidemiology</title>
<p>MNGIE is an ultra-rare disorder with a European incidence of &#x0003C;1 in a million, with Orphanet estimating the prevalence to be 1&#x02013;9 in 1,000,000 world-wide (Orphanet, <xref ref-type="bibr" rid="B110">2018</xref>). Estimated epidemiological data is largely confined to various case reports or case series from several groups over the last two decades. Halter et al. (<xref ref-type="bibr" rid="B54">2010</xref>), quotes a personal communication from M. Hirano of fewer than 200 identified patients world-wide (Halter et al., <xref ref-type="bibr" rid="B54">2010</xref>). In the only systematic study of epidemiology of the disease, a minimum prevalence estimate of &#x0007E;0.15 per 1,000,000 was established in a prospective Italian survey in the Emilia-Romagna region (D&#x00027;Angelo et al., <xref ref-type="bibr" rid="B26">2016</xref>).</p>
<p>MNGIE is distributed amongst a widely distributed and ethnically diverse population including Hispanics, Americans, Western Europeans, Jamaicans, Ashkenazi Jewish, Middle Eastern, and Canadians (Nishino et al., <xref ref-type="bibr" rid="B105">2001</xref>; Hirano et al., <xref ref-type="bibr" rid="B60">2004b</xref>; Kintarak et al., <xref ref-type="bibr" rid="B71">2007</xref>; Borhani Haghighi et al., <xref ref-type="bibr" rid="B16">2009</xref>; Bari&#x0015F; et al., <xref ref-type="bibr" rid="B9">2010</xref>). An ethnic predisposition has yet to be established. However since the pathology is inherited in an autosomal recessive fashion, populations in which consanguineous relationships are common are more at risk (Walia et al., <xref ref-type="bibr" rid="B157">2006</xref>).</p>
<p>It is currently not possible to be confident about stating the prevalence of MNGIE as the disorder is appreciably under-diagnosed due its multisystem presentation and rarity (Filosto et al., <xref ref-type="bibr" rid="B39">2011</xref>; Scarpelli et al., <xref ref-type="bibr" rid="B133">2012</xref>). The condition is not familiar to a majority of clinicians, and patients typically undergo referral to several different specialities over a protracted period of time before a diagnosis is achieved. The diagnosis is often not made until after the death of one or two family members with similar symptomatology.</p>
</sec>
<sec id="s5">
<title>Clinical Description</title>
<p>MNGIE is a relentlessly progressive and degenerative disease, causing significant morbidity. Although the clinical presentation of MNGIE is homogeneous, it is characterized by a complex clinical picture, with the involvement of multiple organ systems to differing extents in different individuals, Table <xref ref-type="table" rid="T1">1</xref>. The mean age mortality of 37.5 years (Nishino et al., <xref ref-type="bibr" rid="B106">2000</xref>). Based on a review of the literature, we propose a classification of the major and minor clinical features of MNGIE. The major clinical features for the diagnosis of MNGIE are severe gastrointestinal dysmotility, cachexia, peripheral neuropathy, ocular symptoms, and asymptomatic diffuse leukoencephalopathy, Figure <xref ref-type="fig" rid="F5">5</xref> (Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>, <xref ref-type="bibr" rid="B60">2004b</xref>; Nishino et al., <xref ref-type="bibr" rid="B106">2000</xref>). Other signs and symptoms represent a minor clinical criterion for the diagnosis of the disease, including certain neurological, muscular, cardiac and endocrine features, as well as other sporadic manifestations discussed below.</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>List of clinical features reported in MNGIE.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>Features</bold></th>
<th valign="top" align="left"><bold>Sign/symptom</bold></th>
<th valign="top" align="center"><bold>Frequency</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Neurological</td>
<td valign="top" align="left">Peripheral neuropathy</td>
<td valign="top" align="center">&#x0002B;&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Hearing loss</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Leukoencephalopathy</td>
<td valign="top" align="center">&#x0002B;&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Seizures</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Migraine</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Anxiety</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Depression</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Cognitive dysfunction</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Dementia</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Mental retardation</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Memory loss</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Ataxia</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Trigeminal neuralgia</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td valign="top" align="left">Neuro-ophthalmic</td>
<td valign="top" align="left">Ophthalmoplegia</td>
<td valign="top" align="center">&#x0002B;&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Ophthalmoparesis</td>
<td valign="top" align="center">&#x0002B;&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Ptosis</td>
<td valign="top" align="center">&#x0002B;&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Glaucoma</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Pigmentary retinopathy</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td valign="top" align="left">Muscular</td>
<td valign="top" align="left">Myopathy</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Red ragged fibers</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td valign="top" align="left">Gastrointestinal</td>
<td valign="top" align="left">Intestinal pseudo-obstruction</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Constipation</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Abdominal cramps</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Nausea</td>
<td valign="top" align="center">&#x0002B;&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Emesis</td>
<td valign="top" align="center">&#x0002B;&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Borborygmy</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Diarrhoea</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Dysphagia</td>
<td valign="top" align="center">&#x0002B;&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Gastroparesis</td>
<td valign="top" align="center">&#x0002B;&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Cachexia</td>
<td valign="top" align="center">&#x0002B;&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Weight loss</td>
<td valign="top" align="center">&#x0002B;&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Oesophageal varices</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Megacolon</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Diverticulosis</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Intestinal perforation</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Peritonitis</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Hepatic steatosis</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Hepatomegaly</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Cirrhosis</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td valign="top" align="left">Endocrine/Metabolic</td>
<td valign="top" align="left">Diabetes</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Hyperlipidaemia</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Hypertriglyceridemia</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Hypergonadotropic hypogonadism</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td valign="top" align="left">Cardiac</td>
<td valign="top" align="left">Long QT</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Supraventricular tachycardia</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Ventricular hypertrophy</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Mitral valve prolapse</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td valign="top" align="left">Reproductive</td>
<td valign="top" align="left">Ovarian failure</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Erectile dysfunction</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">Amenorrhea</td>
<td valign="top" align="center">&#x0002B;</td>
</tr> <tr>
<td valign="top" align="left">Haematological</td>
<td valign="top" align="left">Anaemia</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td valign="top" align="left">Dermatological</td>
<td valign="top" align="left">Psoriasis</td>
<td valign="top" align="center">&#x0002B;</td>
</tr>
<tr>
<td valign="top" align="left">Developmental</td>
<td valign="top" align="left">Short stature</td>
<td valign="top" align="center">&#x0002B;&#x0002B;</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>&#x0002B;&#x0002B;&#x0002B; indicates a major diagnostic feature of MNGIE, &#x0002B;&#x0002B; a common clinical presentation and &#x0002B; a sporadic feature</italic>.</p>
</table-wrap-foot>
</table-wrap>
<fig id="F5" position="float">
<label>Figure 5</label>
<caption><p>Major clinical features of MNGIE. Copyright permission was obtained for the reproduction of images taken from Bari&#x0015F; et al. (<xref ref-type="bibr" rid="B9">2010</xref>), Filosto et al. (<xref ref-type="bibr" rid="B39">2011</xref>), Scarpelli et al. (<xref ref-type="bibr" rid="B133">2012</xref>).</p></caption>
<graphic xlink:href="fgene-09-00669-g0005.tif"/>
</fig>
<sec>
<title>Onset of Symptoms</title>
<p>The onset of MNGIE disease is usually between the first and second and decade of life, with an average age of onset at 18.5 years (Nishino et al., <xref ref-type="bibr" rid="B105">2001</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>); however, reported age of onset may not be accurate due to delay in diagnosis stemming from the subtlety of non-specific symptoms (Hirano et al., <xref ref-type="bibr" rid="B57">1998</xref>). A few cases of late onset beyond the third decade and as late as the fifth decade have been reported, which were associated with compound heterozygous <italic>TYMP</italic> mutations and a less severe phenotype characterized by a partial reduction of thymidine phosphorylase activity (Marti et al., <xref ref-type="bibr" rid="B86">2005</xref>; Massa et al., <xref ref-type="bibr" rid="B89">2009</xref>). The earliest reported age of onset is five months of age (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). However, in a majority of patients, the first insidious symptoms manifest during childhood (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>).</p>
</sec>
<sec>
<title>Major Clinical Criteria for Diagnosis</title>
<sec>
<title>Gastrointestinal Features</title>
<p>Gastrointestinal dysmotility is one of the most common features of MNGIE, with patients manifesting intestinal pseudo-obstruction, abdominal cramps, enteric bacteria overgrowth, nausea, vomiting, borborygmy, diarrhea, dysphagia, and gastroparesis (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). Gastrointestinal dysfunctions eventually lead to malnutrition, cachexia and severe weight loss with averages of 15 Kg loss being reported (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>). Regardless of the gastrointestinal irregularities, patients appear to have normal serum levels of vitamins E, B12 and folate (Holt et al., <xref ref-type="bibr" rid="B62">1990</xref>; Mueller et al., <xref ref-type="bibr" rid="B98">1999</xref>). Patients with MNGIE often have a frail and slender physique with reduced muscle mass. It is unclear whether the gastrointestinal involvement is the result of intestinal smooth muscle dysfunction caused by mitochondrial defects or whether damage to the enteric nervous system is primarily responsible (Verma et al., <xref ref-type="bibr" rid="B154">1997</xref>). It is recognized that as the disease progresses, the gastrointestinal symptoms are exacerbated, with patients dying from severe malnutrition and gastrointestinal complications such as esophageal varices, megacolon, diverticulosis, bowel perforations, peritonitis, and bacterial overgrowth (Martinez-Garcia et al., <xref ref-type="bibr" rid="B88">2001</xref>; Aksoy et al., <xref ref-type="bibr" rid="B1">2005</xref>; Moran et al., <xref ref-type="bibr" rid="B96">2008</xref>; Granero Castro et al., <xref ref-type="bibr" rid="B52">2010</xref>; Scarpelli et al., <xref ref-type="bibr" rid="B133">2012</xref>; Dreznik et al., <xref ref-type="bibr" rid="B31">2014</xref>; Kalkan et al., <xref ref-type="bibr" rid="B67">2015</xref>; Finsterer and Frank, <xref ref-type="bibr" rid="B41">2017</xref>). Patients exhibiting hepatopathies have also been reported, including cases of hepatic steatosis, hepatomegaly, increased transaminases and cirrhosis (Schupbach et al., <xref ref-type="bibr" rid="B134">2007</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>; Finkenstedt et al., <xref ref-type="bibr" rid="B40">2013</xref>).</p>
</sec>
<sec>
<title>Peripheral Neuropathy</title>
<p>In the peripheral nervous system, MNGIE results in neuropathy (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). This manifests as numbness, paraesthesia (tingling sensation), foot drop and limb weakness (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). The neuropathy has been shown to be demyelinating in all cases, with half the reported cases also having axonal neuropathy (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). Ultra-structurally, nerve biopsies reveal segmental demyelination, myelin sheath abnormalities, and axonal degeneration and depletion (Bedlack et al., <xref ref-type="bibr" rid="B12">2004</xref>). Unilateral or bilateral foot drop and clawed hands may also be observed (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). The neuropathy is characterized by decreased motor and sensory nerve conduction velocities, prolonged F-wave latency and partial conduction block (Bedlack et al., <xref ref-type="bibr" rid="B12">2004</xref>). The clinical and electrophysiological features may mimic those of other conditions including chronic inflammatory demyelinating polyradiculoneuropathy (CIDP) and Charcot-Marie-Tooth disease (Bedlack et al., <xref ref-type="bibr" rid="B12">2004</xref>; Needham et al., <xref ref-type="bibr" rid="B101">2007</xref>).</p>
</sec>
<sec>
<title>Ocular Symptoms</title>
<p>Ocular symptoms such as ptosis and ophthalmoplegia or ophthalmoparesis are also common neurological findings in patients with MNGIE (Barboni et al., <xref ref-type="bibr" rid="B7">2004</xref>). Other uncommon ocular manifestations include reports of mild myopia, glaucomatous-like features and tilted disc with focal defects of the retinal nerve fibers (Barboni et al., <xref ref-type="bibr" rid="B7">2004</xref>). Rarely, pigmentary retinopathy can also be observed in patients with MNGIE (Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>; Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>; Aksoy et al., <xref ref-type="bibr" rid="B1">2005</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>).</p>
</sec>
<sec>
<title>Leukoencephalopathy</title>
<p>One peculiarity of MNGIE is the typically paucisymptomatic central nervous system (CNS) involvement. In the majority of affected individuals, this is identified as white matter lesions that remain subclinical and visible as a signal change on Magnetic Resonance Imaging (MRI) scans indicating progressive leukoencephalopathy (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). Leukoencephalopathy is the hallmark feature of the pathology and its presence in combination with gastrointestinal and neuropathic symptoms significantly narrows the differential diagnosis to MNGIE. The leukoencephalopathy as identified by MRI, is initially patchy but progressively becomes more diffuse, appearing as hypointense on T1- and hyperintense on T2- weighted images and in fluid-attenuated inversion recovery (FLAIR) and fast spin echo (FSE) T2 sequences (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>; &#x000C7;oban et al., <xref ref-type="bibr" rid="B24">2013</xref>; Scarpelli et al., <xref ref-type="bibr" rid="B132">2013</xref>; Gramegna et al., <xref ref-type="bibr" rid="B51">2018</xref>). The most involved region of the CNS in MNGIE is the subcortical white matter. Hyperintensities in the subcortical U-fibers and occasionally in the corpus callosum have been reported, alluding to problems in the interhemispheric communication (Millar et al., <xref ref-type="bibr" rid="B92">2004</xref>; Scarpelli et al., <xref ref-type="bibr" rid="B132">2013</xref>). Areas less frequently affected include the capsular white matter, and the white matter in the basal ganglia, thalami, midbrain, pons and cerebellum (Millar et al., <xref ref-type="bibr" rid="B92">2004</xref>; Barrag&#x000E1;n-Campos et al., <xref ref-type="bibr" rid="B10">2005</xref>; Scaglia et al., <xref ref-type="bibr" rid="B131">2005</xref>; Petcharunpaisan and Castillo, <xref ref-type="bibr" rid="B118">2010</xref>). The reasons why the leukoencephalopathy remains asymptomatic are yet to be elucidated, however it has been suggested that hyperintense lesions observed by MRI could be the result of alterations in the brain microvasculature causing vasogenic oedema and glial dysfunctions (Szigeti et al., <xref ref-type="bibr" rid="B144">2004a</xref>; Scarpelli et al., <xref ref-type="bibr" rid="B132">2013</xref>; Gramegna et al., <xref ref-type="bibr" rid="B51">2018</xref>). Whether there are subtle neuropsychiatric or cognitive changes associated with the leukoencephalopathy remains an open question.</p>
</sec>
</sec>
<sec>
<title>Minor Clinical Criteria for Diagnosis</title>
<sec>
<title>Other Central Nervous System Associated Features</title>
<p>A growing body of evidence suggests that the CNS involvement in MNGIE could be more symptomatic than initially described (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). For instance, in a number of patients, cases of seizures, including generalized tonic-clonic seizures, have been reported (Walia et al., <xref ref-type="bibr" rid="B157">2006</xref>; Yavuz et al., <xref ref-type="bibr" rid="B163">2007</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). Garone et al. indicated that six patients with MNGIE from their study cohort of 102 complained of headache, and similarly an independent study evaluating the frequency of migraine in mitochondrial diseases identified one patient with MNGIE suffering from episodes of cephalgia (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>; Vollono et al., <xref ref-type="bibr" rid="B155">2018</xref>). Psychiatric manifestations have been noted in MNGIE, with patients reporting anxiety and depression, although it remains unclear whether these are secondary to the psychological aspect of coping with a terminal debilitating condition (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>; Scarpelli et al., <xref ref-type="bibr" rid="B132">2013</xref>). Cases of patients with dementia and cognitive dysfunction have also been reported, with one patient also showing mental retardation (Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>; Carod-Artal et al., <xref ref-type="bibr" rid="B20">2007</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). Problems with memory, concentration and visuospatial orientation have also been observed in some patients (Borhani Haghighi et al., <xref ref-type="bibr" rid="B16">2009</xref>). Ataxia is also occasionally observed in MNGIE (Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>). A case study reported trigeminal neuralgia in one patient with MNGIE, and the authors suggested that this could be ascribable to demyelinating lesions in the trigeminal intrapontine fibers within the brain stem, as observed in MRI images, in an analogous way to that observed in patients with multiple sclerosis (Peker and Necmettin Pamir, <xref ref-type="bibr" rid="B116">2005</xref>).</p>
</sec>
<sec>
<title>Sensorineural Hearing Impairment</title>
<p>Hearing loss is reported as one of the most common neurologic features in patients with MNGIE(Hirano et al., <xref ref-type="bibr" rid="B60">2004b</xref>; Bari&#x0015F; et al., <xref ref-type="bibr" rid="B9">2010</xref>; Cardaioli et al., <xref ref-type="bibr" rid="B19">2010</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). For instance, the study by Garone et al. reported that 39% of patients, from a cohort of 102, presented with anacusis (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). Hearing loss appears to be sensorineural and is not common during the presentation of the first symptoms, however it is more prominent in the later stages of the disease (Hirano et al., <xref ref-type="bibr" rid="B60">2004b</xref>).</p>
</sec>
<sec>
<title>Muscular Features</title>
<p>Thymidine phosphorylase is not physiologically expressed in skeletal muscle, but the muscle from patients with MNGIE shows alterations in mtDNA, COX&#x02013;deficient and ragged red fibers and respiratory chain enzymatic defects (Yoshimura et al., <xref ref-type="bibr" rid="B165">1990</xref>; Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>; Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>). This observation has in the past been referred to as the &#x0201C;muscle paradox&#x0201D; (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>; Hirano et al., <xref ref-type="bibr" rid="B60">2004b</xref>); it is now known that the pathological involvement of this tissue is due to systemic accumulations of the pyrimidine nucleosides rather than an absence of thymidine phosphorylase activity itself (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>). In healthy individuals, the absence of detectable thymidine and deoxyuridine suggests that thymidine phosphorylase regulates intracellular and extracellular levels of these deoxyribonucleosides. It is believed that the platelets and other blood cells, as wells as tissues rich in thymidine phosphorylase activity regulate these levels, especially in those tissues which lack thymidine phosphorylase (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>, <xref ref-type="bibr" rid="B106">2000</xref>; Spinazzola et al., <xref ref-type="bibr" rid="B140">2002</xref>; Hirano et al., <xref ref-type="bibr" rid="B59">2004a</xref>). Of note, some patients with MNGIE do not display a primary skeletal muscle involvement (Szigeti et al., <xref ref-type="bibr" rid="B145">2004b</xref>; Cardaioli et al., <xref ref-type="bibr" rid="B19">2010</xref>).</p>
</sec>
<sec>
<title>Endocrine and Metabolic Dysfunctions</title>
<p>Sporadically, there have been reports of MNGIE patients presenting endocrine and metabolic dysfunctions, including endocrine/exocrine pancreatic insufficiency, diabetes, amylase increases and glucose intolerance (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). Alteration in plasma lipid profiles have also been observed in patients presenting severe hyperlipidaemia and hypertriglyceridemia (Bari&#x0015F; et al., <xref ref-type="bibr" rid="B9">2010</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). A reduction of mitochondrial function is likely to be an important contributor to the lipid accumulation and insulin resistance. Furthermore, there have been two reports of patients with MNGIE manifesting hypergonadotropic hypogonadism (Carod-Artal et al., <xref ref-type="bibr" rid="B20">2007</xref>; Kalkan et al., <xref ref-type="bibr" rid="B68">2012</xref>).</p>
</sec>
<sec>
<title>Immunodeficiency</title>
<p>In patients with MNGIE, gastrointestinal dysfunctions can lead to a dysbiosis of the intestinal microbiome, and current research has shown that alterations in the gut flora can impact on systemic adaptive immune responses (Round and Mazmanian, <xref ref-type="bibr" rid="B127">2009</xref>; Filosto et al., <xref ref-type="bibr" rid="B39">2011</xref>; van den Elsen et al., <xref ref-type="bibr" rid="B153">2017</xref>). Additionally, patients often manifest complications, which include diverticular ruptures, intestinal perforations and aspiration pneumonia which expose individuals to infections that can present fatal outcomes. Recurrent infections have been reported, with these adverse events contributing to the worsening of the symptoms and prognosis (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). In one case report, a patient was described with bacterial endocarditis, suggesting the immune system may be suppressed in MNGIE (Yolcu et al., <xref ref-type="bibr" rid="B164">2014</xref>).</p>
</sec>
<sec>
<title>Cardiac Complications</title>
<p>Cardiac manifestations are usually asymptomatic in MNGIE, although the study of Garone et al., reported occasional cardiac complications, including a prolonged QT interval, cardiac arrest and supraventricular tachycardia (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>; El-Hattab and Scaglia, <xref ref-type="bibr" rid="B33">2016</xref>). Abnormal ECG has also been reported in a number of patients, with individuals displaying left ventricular hypertrophy and bundle branch block (Hirano et al., <xref ref-type="bibr" rid="B60">2004b</xref>). A study also described cardiac dysfunction in affected twins, presenting mitral valve prolapse and systolic heart murmurs (Schupbach et al., <xref ref-type="bibr" rid="B134">2007</xref>). Another case study reported the death of two brothers due to cardiomyopathy (Borhani Haghighi et al., <xref ref-type="bibr" rid="B16">2009</xref>).</p>
</sec>
<sec>
<title>Other Sporadic Features</title>
<p>From a review of the literature, other non-specific manifestations have been reported, which are sporadic and are not clearly attributable to MNGIE or the secondary ailments of the disease. Amongst these less common manifestations, patients have been reported with ovarian failure (Borhani Haghighi et al., <xref ref-type="bibr" rid="B16">2009</xref>), anemia, amenorrhea (Gamez et al., <xref ref-type="bibr" rid="B43">2002</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>) and psoriasis (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). Short stature has been reported in a number of patients (Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>; Debouverie et al., <xref ref-type="bibr" rid="B29">1997</xref>; Papadimitriou et al., <xref ref-type="bibr" rid="B114">1998</xref>; Gamez et al., <xref ref-type="bibr" rid="B43">2002</xref>; Mart&#x000ED;n et al., <xref ref-type="bibr" rid="B87">2004</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). Furthermore, a case of erectile dysfunction has been diagnosed in a young male MNGIE patient (Schupbach et al., <xref ref-type="bibr" rid="B134">2007</xref>).</p>
</sec>
</sec>
<sec>
<title>Histopathology</title>
<p>Skeletal muscle biopsy may show ragged-red fibers (due to abnormal proliferation of mitochondria in response to defective oxidative phosphorylation), ultra-structurally abnormal mitochondria, and abnormalities of both mtDNA and mitochondrial electron transport chain enzymes activities on enzyme analysis (Papadimitriou et al., <xref ref-type="bibr" rid="B114">1998</xref>). However, it is important to note that ragged-red fibers are not always seen in MNGIE, as some patients do not display this histological abnormality (Szigeti et al., <xref ref-type="bibr" rid="B145">2004b</xref>; Cardaioli et al., <xref ref-type="bibr" rid="B19">2010</xref>).</p>
<p>Rectal biopsies show eosinophilic cytoplasmic inclusions in the submucosal ganglion cells (Perez-Atayde et al., <xref ref-type="bibr" rid="B117">1998</xref>). Duodenal biopsies show focal muscle atrophy or absence, with increased nerve numbers, serosal granulomas and focal loss of Auerbach&#x00027;s plexus with fibrosis (Teitelbaum et al., <xref ref-type="bibr" rid="B147">2002</xref>). Also, mtDNA depletion, mitochondrial proliferation and smooth cell atrophy are observed in the external layer of the muscularis propria in the stomach and small intestine (Giordano et al., <xref ref-type="bibr" rid="B47">2006</xref>). Loss of interstitial cells of Cajal in the small bowel has also been reported (Zimmer et al., <xref ref-type="bibr" rid="B167">2009</xref>; Yadak et al., <xref ref-type="bibr" rid="B160">2018a</xref>).</p>
<p>Histopathological studies <italic>post mortem</italic> have failed to identify demyelination, neuronal loss or glial scarring in the areas of the brain white matter affected, as visualized by MRI (Szigeti et al., <xref ref-type="bibr" rid="B144">2004a</xref>; Gramegna et al., <xref ref-type="bibr" rid="B51">2018</xref>). However, the presence of albumin in the cytoplasm of reactive astrocytes was observed suggesting functional blood brain barrier alterations and consequent vasogenic oedema as a cause of leukoencephalopathy (Szigeti et al., <xref ref-type="bibr" rid="B144">2004a</xref>). Furthermore, a mild perivascular gliosis was also observed in immunohistochemical analyses (Gramegna et al., <xref ref-type="bibr" rid="B51">2018</xref>).</p>
<p>Ultra-structurally, peripheral nerve fibers show demyelination, and abnormal mitochondrial in Schwann cells (Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>; Bedlack et al., <xref ref-type="bibr" rid="B12">2004</xref>; Said et al., <xref ref-type="bibr" rid="B129">2005</xref>). In addition to loss of myelinated fibers, nerve biopsies demonstrate mild perineural thickening, segmental demyelination, variation in internodal length and evidence of axonal regeneration (Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>).</p>
</sec>
</sec>
<sec id="s6">
<title>Genotype-Phenotype Relationship</title>
<p>The primary clinical manifestations of MNGIE are well characterized and homogeneous (Cardaioli et al., <xref ref-type="bibr" rid="B19">2010</xref>). However, one of the problematic aspects of MNGIE is that specific <italic>TYMP</italic> mutations do not necessarily correlate with distinct phenotypes, and therefore it is not possible to anticipate disease severity, system involvement and age of onset based on the mutation (Nishino et al., <xref ref-type="bibr" rid="B106">2000</xref>). Indeed, individuals with the same <italic>TYMP</italic> mutation do not always exhibit the same phenotype, resulting in heterogeneity amongst patients. We hypothesize that clinical heterogeneity in MNGIE could be attributable to mtDNA heteroplasmy, as observed in other mitochondrial disorders (Morgan-Hughes and Hanna, <xref ref-type="bibr" rid="B97">1999</xref>). For instance, siblings harboring the same mutations (435G&#x0003E;A) have been reported not to display an identical clinical phenotype, with the proband displaying both neurological and gastrointestinal symptoms, whereas the sibling had no gastrointestinal involvement (Gamez et al., <xref ref-type="bibr" rid="B43">2002</xref>).</p>
<p>Some patients have been reported to manifest typical symptoms of MNGIE without any overt muscular abnormalities to confirm the diagnosis, suggesting that there might be a clear genotype-phenotype relationship in patients lacking skeletal muscle involvement (Szigeti et al., <xref ref-type="bibr" rid="B145">2004b</xref>; Cardaioli et al., <xref ref-type="bibr" rid="B19">2010</xref>).</p>
<p>It is unclear how each molecular variant affects the phenotype, however certain mutations have been associated with less severe enzyme dysfunction (10&#x02013;15% residual activity), such as the 266G&#x0003E;A variant, which translates to milder manifestations and presentation of some of the canonical symptoms and a late onset of the disease (Marti et al., <xref ref-type="bibr" rid="B86">2005</xref>; Massa et al., <xref ref-type="bibr" rid="B89">2009</xref>).</p>
<p>Although the nervous and gastrointestinal systems are both affected, some patients display phenotypes characterized by a notably more prominent involvement of one or the other organ system (Gamez et al., <xref ref-type="bibr" rid="B43">2002</xref>). The understanding of why one system is more affected than the other in certain patients remains unclear.</p>
<p>Furthermore, MNGIE-like manifestations occur in patients with normal thymidine phosphorylase activity, which are attributed to mutations in genes other than the <italic>TYMP</italic>, such as <italic>POLG</italic> and <italic>RRM2B</italic> (Nishino et al., <xref ref-type="bibr" rid="B105">2001</xref>).</p>
<p>Heterozygotes for pathogenic <italic>TYMP</italic> mutations exhibit only 26&#x02013;35% thymidine phosphorylase activity in buffy coats, which is sufficient to prevent the disease and the manifestation of a clear phenotype (Spinazzola et al., <xref ref-type="bibr" rid="B140">2002</xref>).</p>
</sec>
<sec id="s7">
<title>Diagnosis</title>
<sec>
<title>Diagnostic Challenges</title>
<p>The rarity of MNGIE and its multisystem nature contribute to a complex clinical picture that is often difficult for non-specialist healthcare professionals to decipher and provide an early diagnosis (Filosto et al., <xref ref-type="bibr" rid="B39">2011</xref>). This can lead to diagnostic delays of between 5 and 10 years (Lara et al., <xref ref-type="bibr" rid="B77">2007</xref>; Taanman et al., <xref ref-type="bibr" rid="B146">2009</xref>). Although confirmation of the diagnosis by testing for thymidine and deoxyuridine in the urine and plasma, combined with Sanger sequencing of the <italic>TYMP</italic> gene is straightforward, initial identification of this rare condition often requires a clinical interdisciplinary approach, leading to diagnostic delays, and unnecessary invasive diagnostic procedures, such as exploratory surgeries for gastrointestinal disturbance or unnecessary treatments, such as intravenous immunoglobulin before the diagnosis is made. A late diagnosis is often associated with a worse prognosis (Scarpelli et al., <xref ref-type="bibr" rid="B133">2012</xref>; &#x000C7;oban et al., <xref ref-type="bibr" rid="B24">2013</xref>). This situation advocates the urgent need for the early diagnosis of MNGIE. Thus, thymidine phosphorylase deficiency should be suspected in cases where gastrointestinal and neurological involvement coexist, particularly where there is leukoencephalopathy on MRI or abnormalities of ocular motility (Scarpelli et al., <xref ref-type="bibr" rid="B133">2012</xref>). The symptoms of MNGIE often resemble other conditions which are usually included in the differential diagnosis. Frequently, patients are incorrectly diagnosed with anorexia nervosa, inflammatory bowel disease, Crohn&#x00027;s disease, Whipple disease, chronic intestinal pseudo-obstruction, coeliac disease, chronic inflammatory demyelinating polyneuropathy and demyelinating forms of Charcot-Marie-Tooth disease (Said et al., <xref ref-type="bibr" rid="B129">2005</xref>; Needham et al., <xref ref-type="bibr" rid="B101">2007</xref>; Filosto et al., <xref ref-type="bibr" rid="B39">2011</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>; Demaria et al., <xref ref-type="bibr" rid="B30">2016</xref>; Imperatore et al., <xref ref-type="bibr" rid="B63">2017</xref>; Nagata and Buckelew, <xref ref-type="bibr" rid="B99">2017</xref>; Kucerov&#x000E1; et al., <xref ref-type="bibr" rid="B74">2018</xref>). Phenotypes resembling MNGIE may be seen in patients with other mitochondrial DNA depletion syndromes including <italic>POLG</italic> or <italic>RRM2B</italic> mutations and Kearns-Sayre syndrome. These are often referred to as pseudo-MNGIE manifestations (Shaibani et al., <xref ref-type="bibr" rid="B135">2009</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>; Prasun and Koeberl, <xref ref-type="bibr" rid="B122">2014</xref>). More recently two cases of MNGIE-like patients exhibiting <italic>POLG</italic> mutations were reported to manifest leukoencephalopathy and demyelinating peripheral neuropathy, which are characteristic not typically observed with these mutations (Yasuda et al., <xref ref-type="bibr" rid="B162">2018</xref>). Another case study, reports two patients with a MNGIE-like phenotype exhibiting optic atrophy associated with a novel <italic>POLG</italic> mutation affecting the C- terminal sub-domain of the protein (Felhi et al., <xref ref-type="bibr" rid="B35">2018</xref>).</p>
</sec>
<sec>
<title>Current Diagnostic Methods for MNGIE</title>
<sec>
<title>Thymidine and Deoxyuridine Measurement in Plasma and Urine</title>
<p>Plasma thymidine and deoxyuridine levels are increased to &#x0003E;3 &#x003BC;mol/L and &#x0003E;5 &#x003BC;mol/L, respectively, compared to undetectable levels in healthy unaffected controls (Mart&#x000ED; et al., <xref ref-type="bibr" rid="B84">2003</xref>, <xref ref-type="bibr" rid="B85">2004</xref>). Urine concentrations of thymidine and deoxyuridine are also increased (Spinazzola et al., <xref ref-type="bibr" rid="B140">2002</xref>).</p>
</sec>
<sec>
<title>TP Activity</title>
<p>An evaluation of thymidine phosphorylase activity is typically required to complement the measurement of thymidine and deoxyuridine concentrations in body fluids, or upon the identification of novel variants of the <italic>TYMP</italic> gene, or when clinics do not have access to Sanger sequencing of <italic>TYMP</italic>. Thymidine phosphorylase activity in the leukocytes of patients with MNGIE are severely reduced, showing little (&#x0003C;10% of healthy unaffected controls) or no activity (Spinazzola et al., <xref ref-type="bibr" rid="B140">2002</xref>; Mart&#x000ED; et al., <xref ref-type="bibr" rid="B85">2004</xref>). Heterozygous carriers of <italic>TYMP</italic> mutations have 26 to 35% of residual thymidine phosphorylase activity but are asymptomatic and have undetectable levels of plasma thymidine and deoxyuridine (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>; Spinazzola et al., <xref ref-type="bibr" rid="B140">2002</xref>). These data suggest that a 70% reduction in thymidine phosphorylase activity is insufficient to be pathogenic.</p>
</sec>
<sec>
<title>Molecular Genetic Abnormalities</title>
<p>Patients are either homozygous or compound heterozygous for <italic>TYMP</italic> mutations and therefore the diagnosis is made by the detection of biallelic pathogenic variants in the gene (Nishino et al., <xref ref-type="bibr" rid="B105">2001</xref>). For this reason genetic counseling is fundamental as the autosomal recessive inheritance translates to a 25% risk for offspring of carrier parents to be affected, whereas 50% will be asymptomatic carriers. Cases of MNGIE amongst twins have been reported, including a triplet in which two monozygotic pairs were affected whereas the dizygotic sibling was an asymptomatic carrier (Schupbach et al., <xref ref-type="bibr" rid="B134">2007</xref>). Similarly, other case studies have described monozygotic twins carrying the same mutation and exhibiting the same phenotype (Papadimitriou et al., <xref ref-type="bibr" rid="B114">1998</xref>; Bedlack et al., <xref ref-type="bibr" rid="B12">2004</xref>). Genetic counseling should be made available to affected individuals and their families.</p>
<p>Targeted gene testing for primary <italic>TYMP</italic> mutations or more comprehensive genomic analyses for the whole genome including secondary mtDNA mutations can be used, such as Sanger or next generation sequencing, quantitative PCR, Southern blot, multiplex ligation-dependent probe amplification and genome-wide single nucleotide polymorphism microarrays (Katsanis and Katsanis, <xref ref-type="bibr" rid="B70">2013</xref>). It is important to note that when biochemistry analyses are positive, revealing nucleoside accumulation and loss of thymidine phosphorylase function, Sanger sequencing is advisable. However, in case of doubtful biochemical profiling or negative detection of <italic>TYMP</italic> variants by Sanger sequencing, gene panels, whole exome sequencing (WES), whole genome sequencing (WGS) or mtDNA studies are recommended for the identification of MNGIE-like disorders.</p>
<p>Examination of mtDNA using Southern blot analysis has revealed abnormalities, including those which are quantitative (depletions) and qualitative (multiple deletions and point mutations) (Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>; Papadimitriou et al., <xref ref-type="bibr" rid="B114">1998</xref>; Nishino et al., <xref ref-type="bibr" rid="B106">2000</xref>). An uneven distribution of mtDNA abnormalities (depletion, single nucleotide variants, deletions, duplication) along the nerves is hypothesized to be the cause of segmental demyelination. MtDNA depletion, mitochondrial proliferation, and smooth cell atrophy have been shown in the external layer of the muscularis propria in the stomach and small intestine (Giordano et al., <xref ref-type="bibr" rid="B47">2006</xref>, <xref ref-type="bibr" rid="B46">2008</xref>).</p>
</sec>
<sec>
<title>Clinical Examination</title>
<p>Currently the diagnosis is initially suspected based on clinical signs of gastrointestinal dysmotility, cachexia, peripheral neuropathy and ophthalmoplegia (Nishino et al., <xref ref-type="bibr" rid="B106">2000</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>). It is noteworthy that these clinical evaluations are not specific to the disease but are rather a general approach used for patients to assist in raising the suspicion of MNGIE. Audiologic, ophthalmologic evaluation and gastroenterology examinations such as abdominal CT, upper gastrointestinal tract contrast radiography, esophagogastroduodenoscopy, sigmoidoscopy, liquid phase scintigraphy and antroduodenal manometry are supportive for the diagnosis of MNGIE (Mueller et al., <xref ref-type="bibr" rid="B98">1999</xref>; Teitelbaum et al., <xref ref-type="bibr" rid="B147">2002</xref>; Halter et al., <xref ref-type="bibr" rid="B54">2010</xref>).</p>
</sec>
<sec>
<title>MRI</title>
<p>Progressive and diffuse leukoencephalopathy is invariably observed in brain MRI of MNGIE patients, visualized as described above. Therefore, MRI is often used to evaluate one of the main clinical criteria of MNGIE. White matter MRI abnormalities provide a clear indication of the disease and in its absence MNGIE disease is very unlikely (Scarpelli et al., <xref ref-type="bibr" rid="B132">2013</xref>). In fact, leukoencephalopathy helps discriminate between MNGIE and pseudo-MNGIE presentations of other disorders (Hirano et al., <xref ref-type="bibr" rid="B60">2004b</xref>). However, a case study of patients with <italic>POLG</italic> mutations has been documented which present MNGIE-like phenotype exhibiting leukoencephalopathy on MRI, which is not a typical observation in these type of patients (Yasuda et al., <xref ref-type="bibr" rid="B162">2018</xref>). One study also showed mild cortical atrophy and oculomotor and trigeminal nerve signal enhancement in T1 sequences (Petcharunpaisan and Castillo, <xref ref-type="bibr" rid="B118">2010</xref>). Similarly, another study reported supratentorial cortical atrophy in patients with MNGIE (Barrag&#x000E1;n-Campos et al., <xref ref-type="bibr" rid="B10">2005</xref>). Magnetic resonance spectroscopy (MRS) studies have also shown reduction in choline and N-acetyl aspartate indicating axonal loss and glial cells loss (Schupbach et al., <xref ref-type="bibr" rid="B134">2007</xref>). However, in a recent study by Gramegna et al., MRS of patients with MNGIE has shown a consistent reduction of all metabolites in the white matter although their ratio to creatine remained in the normal range. This finding, combined with the increased radial water diffusivity in images, is suggestive of increases in water content which could be attributable to a possible increase in the BBB permeability rather than neural cell loss (Gramegna et al., <xref ref-type="bibr" rid="B51">2018</xref>).</p>
</sec>
<sec>
<title>Electrodiagnostic Procedures</title>
<p>Electrodiagnostic procedures are valuable to confirm neuromuscular dysfunctions, which are one of the major clinical criteria for MNGIE. Neurogenic and myogenic abnormalities are commonly detected on electromyography. Nerve conductions studies typically show decrease in motor and sensory nerve conduction velocities and prolonged F-wave (Hirano et al., <xref ref-type="bibr" rid="B60">2004b</xref>).</p>
</sec>
<sec>
<title>Biochemical Findings</title>
<p>Routine clinical biochemical studies do not provide specific clues to a diagnosis of for MNGIE, although these are helpful to corroborate features that are common in patients including lactic acidosis, indicative of an oxidative phosphorylation defect (Mart&#x000ED; et al., <xref ref-type="bibr" rid="B85">2004</xref>). Furthermore, mild elevation in serum lactic acid and serum pyruvate have been reported, as well as elevation in uric acid, lactate dehydrogenase and creatine kinase (Hirano et al., <xref ref-type="bibr" rid="B61">1994</xref>; Teitelbaum et al., <xref ref-type="bibr" rid="B147">2002</xref>). Increased levels of cerebrospinal fluid lactate and total protein have been described (Teitelbaum et al., <xref ref-type="bibr" rid="B147">2002</xref>; R&#x000F6;eben et al., <xref ref-type="bibr" rid="B125">2017</xref>). Severe hypokalaemia was also observed in two patients leading to muscle tetany and cardiac arrythmia (Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>).</p>
</sec>
</sec>
</sec>
<sec id="s8">
<title>Pre-Clinical Experimental Models</title>
<p><italic>In vitro</italic> and <italic>in vivo</italic> models of MNGIE have been developed to enhance the understanding of the disease pathogenesis and the development of experimental therapies, Table <xref ref-type="table" rid="T2">2</xref>.</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p><italic>In vitro</italic> and <italic>in vivo</italic> models of MNGIE.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>Cell type</bold></th>
<th valign="top" align="left"><bold>Investigation</bold></th>
<th valign="top" align="left"><bold>Summary of findings</bold></th>
<th valign="top" align="left"><bold>References</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left" colspan="4"><italic><bold>In vitro</bold></italic> <bold>models</bold></td>
</tr>
<tr>
<td valign="top" align="left">Healthy control and MNGIE fibroblasts</td>
<td valign="top" align="left">Contribution of thymidine phosphorylase deficiency to nucleotide pool imbalance</td>
<td valign="top" align="left">Decline in thymidine concentration in culture medium of healthy cells. MNGIE fibroblasts incapable of metabolising thymidine but released it</td>
<td valign="top" align="left">Spinazzola et al., <xref ref-type="bibr" rid="B140">2002</xref></td>
</tr>
<tr>
<td valign="top" align="left">MNGIE fibroblasts</td>
<td valign="top" align="left">Role of thymidine phosphorylase deficiency and deoxynucleotide pool accumulation in mtDNA damage</td>
<td valign="top" align="left">Identification of 36 mtDNA point mutations, a TT to AA substitution and single nucleotide deletion in MNGIE cell lines. COX activity reduced and ROS production increased contributing to mtDNA mutations</td>
<td valign="top" align="left">Nishigaki et al., <xref ref-type="bibr" rid="B102">2003</xref></td>
</tr>
<tr>
<td valign="top" align="left">HeLa cell line</td>
<td valign="top" align="left">Perturbation of deoxynucleoside pools in cultured cells to evaluate mtDNA damage</td>
<td valign="top" align="left">Cells cultured in 50&#x003BC;M thymidine showed expansion of TTP and dGTP pools and depletion of dCTP and dATP pools. Several mtDNA deletions observed</td>
<td valign="top" align="left">Song et al., <xref ref-type="bibr" rid="B139">2003</xref></td>
</tr>
<tr>
<td valign="top" align="left">Healthy skin and lung quiescent fibroblasts</td>
<td valign="top" align="left">Association of mtDNA depletions with post-mitotic cells</td>
<td valign="top" align="left">Thymidine phosphorylated via mitochondrial TK2 in quiescent cells and via cytosolic TK1 in cycling cells. Absence of TK1 in quiescent creates a bias in TTP pools, contributing to mtDNA depletions</td>
<td valign="top" align="left">Ferraro et al., <xref ref-type="bibr" rid="B36">2005</xref></td>
</tr>
<tr>
<td valign="top" align="left">Murine hepatocytes</td>
<td valign="top" align="left">Murine hepatocyte mitochondria as an <italic>in organello</italic> model to demonstrate mtDNA depletion is a result of deoxynucleoside depletion</td>
<td valign="top" align="left">Excess thymidine resulted in increased dTTP and consequent depletion of dCTP, due to competition of thymidine and cytidine for TK2, resulting in mtDNA depletion. Supplementation of dCTP restored mtDNA depletions</td>
<td valign="top" align="left">Gonz&#x000E1;lez-Vioque et al., <xref ref-type="bibr" rid="B50">2011</xref></td>
</tr>
<tr>
<td valign="top" align="left">MNGIE-derived iPSCs</td>
<td valign="top" align="left">Differentiation of patient derived iPSCs into cerebral organoids as an <italic>in vitro</italic> model of the CNS</td>
<td valign="top" align="left">MNGIE cerebral organoids expressed neuronal progenitors, neurons, differentiated astroglial cells and myelinating oligodendrocytes. No difference in myelination patterns observed between MNGIE and healthy control organoids</td>
<td valign="top" align="left">Pacitti and Bax, <xref ref-type="bibr" rid="B113">in press</xref></td>
</tr>
<tr>
<td valign="top" align="left" colspan="4"><italic><bold>In vivo</bold></italic> <bold>models</bold></td>
</tr>
<tr>
<td valign="top" align="left">Murine KO (<italic>Tymp<sup>&#x02212;/&#x02212;</sup>/Upp1<sup>&#x02212;/&#x02212;</sup></italic>)</td>
<td valign="top" align="left">Physiological function of thymidine phosphorylase. Ascertain if pathogenesis of MNGIE and mtDNA depletion and replication error were attributable to aberrant thymidine metabolism</td>
<td valign="top" align="left">10-fold increase in plasma deoxyuridine and thymidine. Development of cerebral oedema and hyperintense T2 MRI regions, with dilation in axonal myelin fibers but no demyelination. No peripheral neuropathy observed. Lack of mtDNA abnormality in brain and muscle</td>
<td valign="top" align="left">Haraguchi et al., <xref ref-type="bibr" rid="B56">2002</xref></td>
</tr>
<tr>
<td valign="top" align="left">Murine KO (<italic>Tymp<sup>&#x02212;/&#x02212;</sup>/Upp1<sup>&#x02212;/&#x02212;</sup></italic>)</td>
<td valign="top" align="left">Characterization of the biochemical, genetic and histological features of MNGIE and specific tissues involved</td>
<td valign="top" align="left">Undetectable thymidine phosphorylase in all tissue except liver. Thymidine elevated by 4-65-fold in all tissues. MRI showed cerebral oedema and T2 hyperintensities, with late onset cerebral and cerebellar white matter vacuoles without demyelination or axonal loss. Detection of mtDNA depletion and histological abnormalities in the brain but without skeletal muscle and gastrointestinal system involvement</td>
<td valign="top" align="left">L&#x000F3;pez et al., <xref ref-type="bibr" rid="B83">2009</xref></td>
</tr>
<tr>
<td valign="top" align="left">Murine KO (<italic>Tymp<sup>&#x02212;/&#x02212;</sup>/Upp1<sup>&#x02212;/&#x02212;</sup></italic>)</td>
<td valign="top" align="left">Role of deoxynucleoside accumulation in the pathogenesis of MNGIE. Recreation of the gastrointestinal phenotype by dietary supplementation with thymidine and deoxyuridine</td>
<td valign="top" align="left">100-fold increase in thymidine concentrations. Acquisition of mtDNA depletion and histologically evident COX deficiency in brain and small intestine cells. Treated mice had reduced body masses and intestinal smooth muscle cells, and increased fibrosis, muscle weakness, leukoencephalopathy, and decreased survival</td>
<td valign="top" align="left">Garcia-Diaz et al., <xref ref-type="bibr" rid="B44">2014</xref></td>
</tr>
</tbody>
</table>
</table-wrap>
<sec>
<title><italic>In vitro</italic> Models</title>
<p>There is a paucity of specific <italic>in vitro</italic> models of MNGIE described in the literature. A majority of the cell types implemented to date have no relevance to the organ systems affected in MNGIE and were used mainly to understand the effect of deoxyribonucleoside pool imbalances on cellular functions (Rampazzo et al., <xref ref-type="bibr" rid="B124">2000</xref>, <xref ref-type="bibr" rid="B123">2004</xref>; Pontarin et al., <xref ref-type="bibr" rid="B120">2003</xref>). The first model developed was by Spinazzola et al. (<xref ref-type="bibr" rid="B140">2002</xref>), where fibroblasts derived from healthy controls and patients with MNGIE were used to study the contribution of thymidine phosphorylase in the deoxyribonucleoside pool imbalances. They examined the culture medium of cultured fibroblasts to determine the ability of healthy control cells and MNGIE patient cells to metabolize thymidine; in contrast to healthy cells, where a decline in media thymidine concentrations was measured, MNGIE fibroblasts were not able to catabolize thymidine, resulting in an increase in culture medium thymidine levels (Spinazzola et al., <xref ref-type="bibr" rid="B140">2002</xref>).</p>
<p>Nishigaki et al. (<xref ref-type="bibr" rid="B102">2003</xref>) employed MNGIE-derived fibroblast to further evaluate the role of dysfunctional thymidine phosphorylase in the accumulation of deoxyribonucleoside pools (both thymidine and deoxyuridine) and with consequent mtDNA damage. Using patient-derived cell lines, 36 mtDNA point mutations, a TT to AA substitution and a single nucleotide deletion were identified. In MNGIE fibroblast cultures, cyclooxygenase activity was decreased, whereas deoxyuridine levels were markedly elevated. Also, an elevation in reactive oxygen species was observed, which was proposed to be a contributing factor to the accumulation of mtDNA point mutations. MtDNA sequencing of cultured fibroblasts and <italic>post mortem</italic> biopsies of skeletal muscle cells revealed a higher level of mtDNA point mutations in fibroblasts, whereas multiple mutations and deletions were observed at low levels in skeletal muscles. This suggests that fibroblasts primarily depend on anaerobic glycolysis rather than oxidative phosphorylation and therefore the absence of pressures on defective respiratory chain complexes in mitochondria results in the accumulation of nucleotide pools that generates a higher number of point mutations (Nishigaki et al., <xref ref-type="bibr" rid="B102">2003</xref>).</p>
<p>In 2003, Song et al. used HeLa cells to show that increases in thymidine levels lead to an imbalance in dNTP pools, which ultimately result in mtDNA mutations. HeLa cells were cultured in medium supplemented with 50 &#x003BC;M thymidine. After 4 h of growth in thymidine-supplemented medium, the mitochondrial deoxythymidine triphosphate (dTTP) and deoxyguanosine triphosphate (dGTP) pools were shown to expand, whereas the deoxycytidine triphosphate (dCTP) pool dropped significantly, and the dATP pool dropped slightly. In whole cell extracts, the dTTP and dGTP pools also expanded, the dCTP pool decreased by approximately 50%, and the dATP pool remained unchanged. These changes in mitochondrial dNTP pools are consistent with a mutagenic mechanism involving the T-G mispairing followed by a next-nucleotide effect involving T insertion opposite to A. Supplementation of HeLa cells for 8 months with 50 &#x003BC;M thymidine, resulted in several mtDNA deletions (Song et al., <xref ref-type="bibr" rid="B139">2003</xref>). It is noteworthy that to recreate MNGIE metabolite accumulations, the study implemented a 2.5-fold higher thymidine concentration to that observed in MNGIE patients, which is typically 20 &#x003BC;M thymidine (Song et al., <xref ref-type="bibr" rid="B139">2003</xref>; Ferraro et al., <xref ref-type="bibr" rid="B36">2005</xref>).</p>
<p>In 2005, Ferraro et al. conducted a similar experiment to Spinazzola et al. (<xref ref-type="bibr" rid="B140">2002</xref>), but used healthy skin and lung quiescent fibroblasts to demonstrate that mtDNA depletions are associated with post-mitotic cells. The study identified that mitochondrial deoxynucleotides are synthesized by two independent salvage pathways. In cycling cells, thymidine is salvaged by cytosolic thymidine kinase 1 (TK1) whereas in quiescent cells, thymidine is phosphorylated via thymidine kinase 2 (TK2) in the mitochondria, and the thymidine diphosphates then exported to the cytosol. Both cytosolic and mitochondrial thymidine phosphates undergo rapid turnover via deoxythymidine monophosphate (dTMP)/ thymidine substrate cycles. Therefore, quiescent cells lacking <italic>de novo</italic> synthesis and TK1 create a bias in dTTP pools, and this is further exacerbated in MNGIE where thymidine phosphorylase is lacking. Ferraro et al. (<xref ref-type="bibr" rid="B36">2005</xref>) cultured quiescent fibroblasts in medium supplemented with 10&#x02013;40 &#x003BC;M thymidine and observed intra-cytosolic and intra-mitochondrial increase in dTTP and uridine triphosphates, both contributing to mtDNA depletions, concluding that mitochondrial DNA damage in MNGIE is predominant in post-mitotic cells (Ferraro et al., <xref ref-type="bibr" rid="B36">2005</xref>).</p>
<p>Gonz&#x000E1;lez-Vioque et al. (<xref ref-type="bibr" rid="B50">2011</xref>), made use of murine liver mitochondria to show that mtDNA depletions are a consequence of a limited dNTP availability rather than a dNTP imbalance itself. The study demonstrated that excess of thymidine results in an increase of dTTP concentrations in mitochondria due to TK2 activity, with consequent secondary depletion of dCTP. TK2 phosphorylates both thymidine and cytidine competitively; each deoxynucleotide modulates the enzyme to consequently inhibit the phosphorylation of the other, although thymidine is more efficient at inhibiting the phosphorylation of cytidine. The addition of dCTP or deoxycytidine restored mtDNA depletions even in the presence of thymidine overload, confirming that mtDNA depletions are the result of a limited availability of substrates for mtDNA replication, caused by nucleotide depletion consequent to nucleotide overload rather than thymidine excess alone (Gonz&#x000E1;lez-Vioque et al., <xref ref-type="bibr" rid="B50">2011</xref>).</p>
<p>Overall, <italic>in vitro</italic> models developed so far, have been informative and relevant for the understanding of the underlying biochemical and molecular mechanisms, associated with the deoxyribonucleoside pool imbalances and mtDNA depletions. However, to date tissue-specific models using cells relevant to the CNS, PNS and enteric system have not been developed and thus the study of alternative implications for the lack of thymidine phosphorylase expression on other biological pathways, including nervous tissue development and maintenance, has not been fully addressed.</p>
<p>Our research group has developed for the first time a MNGIE iPSC line which was used to generate a cerebral organoid model for the study of the CNS pathomolecular mechanisms and provide elucidations on the leukoencephalopathy observed (Pacitti, <xref ref-type="bibr" rid="B112">2018</xref>; Pacitti and Bax, <xref ref-type="bibr" rid="B113">in press</xref>).</p>
</sec>
<sec>
<title><italic>In vivo</italic> Models</title>
<p>Murine models have proved to be very efficacious in the study of MNGIE, though it is important to consider the significant biological and hence metabolic differences between rodents and humans. This is exemplified by the metabolism of thymidine in the mouse, which is not only phosphorylated by thymidine phosphorylase, but also by uridine phosphorylase 1 and uridine phosphorylase 2; in the human, thymidine is solely metabolized by thymidine phosphorylase (el Kouni et al., <xref ref-type="bibr" rid="B32">1993</xref>). To address this, Haraguchi et al. (<xref ref-type="bibr" rid="B56">2002</xref>) established a murine model based on double knock-out of <italic>Tymp</italic><sup>&#x02212;/&#x02212;</sup><italic>/Upp1</italic><sup>&#x02212;/&#x02212;</sup> genes, whilst uridine phosphorylase 2 is not knocked-out in this model. Although this model recapitulates some features of the disease, it also displays some incongruences with the clinical scenario. The knock-out animals have a 10-fold increase in plasma thymidine and deoxyuridine, compared to &#x0003E;100-fold increase in the human. The mice also show cerebral oedema with hyperintense T2 MRI regions and axonal myelin fiber dilation without demyelination, however no peripheral neurological abnormalities were observed (Haraguchi et al., <xref ref-type="bibr" rid="B56">2002</xref>). Also, Haraguchi et al. (<xref ref-type="bibr" rid="B56">2002</xref>) did not detect any mtDNA abnormalities in brain and muscle tissues of mice, suggesting that the loss of function of thymidine phosphorylase alone is not sufficient to cause MNGIE in this model. This led to the hypothesis that the adjacent gene <italic>SCO2</italic> overlapping with <italic>TYMP</italic> sequences may be also contributing to the disease. The lack of mtDNA depletion in mice may be the result of a difference in mtDNA repair and replication, by which an increase in thymidine concentration may not affect the mitochondria of mice as it does in humans (Haraguchi et al., <xref ref-type="bibr" rid="B56">2002</xref>).</p>
<p>A second double knock-out murine model of MNGIE was created in 2009 by Lopez et al. to characterize the biochemical, genetic and histological features of MNGIE in mice, and translate findings into the clinical picture (L&#x000F3;pez et al., <xref ref-type="bibr" rid="B83">2009</xref>). The resulting mice displayed undetectable thymidine phosphorylase activity in all tissues except in the liver, where the residual 17% activity was attributed to the expression of uridine phosphorylase 2. Mice displayed a 4- to 65-fold increase in thymidine levels in all tissues, with partial mtDNA depletions. Similarly, to the model developed by Haraguchi et al. (<xref ref-type="bibr" rid="B56">2002</xref>), the rodents manifested cerebral oedema with hyperintense T2 MRI signals in white matter, and late-onset cerebral and cerebellar white matter vacuoles without demyelination or axonal loss. However, in contrast to MNGIE patients, the model displayed mtDNA depletion, respiratory chain defects and histological abnormalities only in the brains, without any gastrointestinal or skeletal muscle involvement. L&#x000F3;pez et al. (<xref ref-type="bibr" rid="B83">2009</xref>) suggested that the selective cerebral involvement observed in mice is possibly due to a number of factors, including differences in the life-span between species, as mice may not live long enough to accumulate sufficient mtDNA damage in most tissues or because the deoxyribonucleoside imbalance in humans is substantially more dramatic than in mutant mice. A third explanation is that high expression of TK2 in quiescent neuronal cells of rodent brains may contribute to an increased TTP production, thereby accelerating mtDNA damage in nervous tissues (Rylova et al., <xref ref-type="bibr" rid="B128">2007</xref>). With regard to the contrasting findings of mtDNA depletions between Haraguchi&#x00027;s and Lopez&#x00027;s model, this could be explained by limitations in the analytical methods used for evaluating mtDNA aberrations (L&#x000F3;pez et al., <xref ref-type="bibr" rid="B83">2009</xref>).</p>
<p>In 2014, Garcia-Diaz et al. conducted a study to confirm the hypotheses generated by L&#x000F3;pez et al. (<xref ref-type="bibr" rid="B83">2009</xref>) with regard to the role of thymidine accumulation in the pathogenesis of MNGIE, and in particular in the gastrointestinal involvement. L&#x000F3;pez et al. (<xref ref-type="bibr" rid="B83">2009</xref>) failed to recapitulate the gastrointestinal dysmotility in mutant mice, and only replicated certain pathological features in mouse brains. It was speculated that the mild phenotype observed in the model is attributable to the short life-span of the animals combined with the modest increase in deoxyribonucleoside accumulation produced by mutant mice (which was 45-fold lower than that observed in MNGIE patients). Thus, to overcome this, Garcia-Diaz et al. (<xref ref-type="bibr" rid="B44">2014</xref>) supplemented mutant mice with exogenous thymidine and deoxyuridine to recreate a similar disproportion of deoxyribonucleoside concentrations as observed in humans, recapitulating the &#x0003E;100-fold increase in thymidine concentrations. The prolonged supplementation of deoxyribonucleosides in mutant mice resulted in the acquisition of biochemical abnormalities in the brain and small intestine, including mitochondrial DNA depletion as evidenced by cyclooxygenase deficiency observed through histological evaluations. Overall, treating double knock-out mice with thymidine was sufficient to enhance the phenotype of the model to recapitulate the clinical features of MNGIE, including weight loss, small intestine muscularis propria pathology, muscle weakness, leukoencephalopathy and decreased survival (Garcia-Diaz et al., <xref ref-type="bibr" rid="B44">2014</xref>). However, in contrast to patients with MNGIE, who have multiple mtDNA deletions in brain, muscles, kidney and liver, the brain and muscle of 24-month old treated and untreated wild-type and <italic>Tymp</italic><sup>&#x02212;/&#x02212;</sup><italic>/Upp1</italic><sup>&#x02212;/&#x02212;</sup> mice demonstrated similar levels of deleted mtDNA, suggesting that this is most likely due to aging rather than thymidine phosphorylase deficiency (Garcia-Diaz et al., <xref ref-type="bibr" rid="B44">2014</xref>). Differences in the deoxyribonucleoside metabolism between humans and mice indicates the inadequacy of this model in recapitulating the human disease (Haraguchi et al., <xref ref-type="bibr" rid="B56">2002</xref>; L&#x000F3;pez et al., <xref ref-type="bibr" rid="B83">2009</xref>; Garcia-Diaz et al., <xref ref-type="bibr" rid="B44">2014</xref>).</p>
</sec>
</sec>
<sec id="s9">
<title>Treatment Options</title>
<sec>
<title>Disease Management</title>
<p>Currently, there are no specific therapies for patients with MNGIE whose effectiveness has been evidenced in clinical trial studies. The current disease management guidelines aims to treat the specific symptoms that are evident in each individual and invariably requires the co-ordinated effort of different clinical specialities. Abdominal pain and nausea/vomiting secondary to gastrointestinal dysmotility are almost invariable, with patients treated symptomatically with analgesics, bowel motility stimulant drugs, anti-emetics and antibiotics for intestinal bacterial overgrowth (Teitelbaum et al., <xref ref-type="bibr" rid="B147">2002</xref>; Oztas et al., <xref ref-type="bibr" rid="B111">2010</xref>). Domperidone may be administered to control the post-prandial emesis and nausea (Yavuz et al., <xref ref-type="bibr" rid="B163">2007</xref>). The reduction of epigastric pain episodes, especially in patients that are refractory to opiate pain management, can be achieved by performing a celiac plexus block with bupivacaine or by the selective blockade of the splanchnic nerve (Teitelbaum et al., <xref ref-type="bibr" rid="B147">2002</xref>; Celebi et al., <xref ref-type="bibr" rid="B22">2006</xref>). Pain may also occur in the limbs due to peripheral polyneuropathy and this can be treated with centrally acting agents such as amitriptyline, gabapentin and pregabalin (Hafez et al., <xref ref-type="bibr" rid="B53">2014</xref>; Finsterer and Frank, <xref ref-type="bibr" rid="B41">2017</xref>). Patients with MNGIE have an increased incidence of perforation of the gut, which generally requires emergency abdominal surgery (Granero Castro et al., <xref ref-type="bibr" rid="B52">2010</xref>).</p>
<p>Malnutrition is a major problem in the majority of patients; various forms of parenteral nutrition, including total parenteral nutrition, are frequently required, but do not modify outcome (Wang et al., <xref ref-type="bibr" rid="B159">2015</xref>). Complications of long-term parenteral nutrition use include the development of hepatic steatosis and cholestasis, and triglyceride hyperlipidemia. For patients with MNGIE there is the risk of metabolic oversupply from the lipid and carbohydrate components of the parenteral nutrition, leading to further mitochondrial toxicity. In later stages of the disease, patients are often unable to tolerate nasogastric nutrition due to gastrointestinal dysmotility (Wang et al., <xref ref-type="bibr" rid="B159">2015</xref>). Portal hypertension may occur and be complicated by ascites and esophageal varices (Moran et al., <xref ref-type="bibr" rid="B96">2008</xref>). These conditions are treated in the same way as when they occur in other conditions. Drugs that interfere with mitochondrial function should be avoided and hepatically metabolized drugs should be administered with care or contraindicated depending on the patient&#x00027;s liver function (Halter et al., <xref ref-type="bibr" rid="B54">2010</xref>). Physiotherapy and occupational therapy input is usually required, particularly to address the neurological aspects of the condition.</p>
</sec>
<sec>
<title>Investigational Therapies</title>
<p>A number of experimental therapeutic approaches are currently under investigation, including haemodialysis and peritoneal dialysis (Spinazzola et al., <xref ref-type="bibr" rid="B140">2002</xref>; la Marca et al., <xref ref-type="bibr" rid="B75">2006</xref>; Yavuz et al., <xref ref-type="bibr" rid="B163">2007</xref>), allogeneic haematopoietic stem cell transplantation (AHSCT) (Hirano et al., <xref ref-type="bibr" rid="B58">2006</xref>; Halter et al., <xref ref-type="bibr" rid="B54">2010</xref>; Filosto et al., <xref ref-type="bibr" rid="B38">2012</xref>), platelet transfusion (Lara et al., <xref ref-type="bibr" rid="B78">2006</xref>), orthotopic liver transplant (OLT) (De Giorgio et al., <xref ref-type="bibr" rid="B28">2016</xref>) and enzyme replacement (Bax et al., <xref ref-type="bibr" rid="B11">2013</xref>). The therapeutic strategy common to all these approaches is to reduce or eliminate the pathological concentrations of thymidine and deoxyuridine, thereby ameliorating intracellular deoxyribonucleoside imbalances and preventing further damage to mtDNA, thus translating into clinical stabilization or improvement.</p>
<p>Plasma concentrations of thymidine were shown to be transiently lowered by haemodialysis, and infusions of platelets, which contain thymidine phosphorylase, were shown to reduce circulating levels of thymidine and deoxyuridine in two patients (Lara et al., <xref ref-type="bibr" rid="B78">2006</xref>; R&#x000F6;eben et al., <xref ref-type="bibr" rid="B125">2017</xref>). Disadvantages of these approaches are that haemodialysis is a burdensome procedure and long-term platelet therapy carries risks of developing immune reactions and transmission of viral infections and the short duration of effect.</p>
<p>AHSCT offers the possibility of a permanent correction of the thymidine phosphorylase deficiency but is limited by the availability of a matched donor. Patients are often in a poor clinical condition with an impaired capacity to tolerate transplant related problems and the aggressive conditioning and immunosuppressive chemotherapy (Halter et al., <xref ref-type="bibr" rid="B54">2010</xref>, <xref ref-type="bibr" rid="B55">2015</xref>). AHSCT also presents pharmacological challenges in terms of administering drugs with possible mitochondrial toxicity, and the requirement for parenteral administration due to disturbed gastrointestinal function and impairment of absorption. A published consensus proposal for standardizing an approach to AHSCT in patients with MNGIE recommended a recruitment restriction to patients in a stable clinical condition without irreversible end stage disease and having optimal donor (Halter et al., <xref ref-type="bibr" rid="B54">2010</xref>). AHSCT is associated with an elevated mortality risk due to host-vs. -graft reactions and hospital acquired infections caused by the aggressive immunosuppressive regimen, combined with the disease (Halter et al., <xref ref-type="bibr" rid="B54">2010</xref>; Filosto et al., <xref ref-type="bibr" rid="B38">2012</xref>; Peedikayil et al., <xref ref-type="bibr" rid="B115">2015</xref>). Halter et al. (<xref ref-type="bibr" rid="B55">2015</xref>) reported a mortality of 62.5% after the follow-up of 24 patients who received AHSCT (Halter et al., <xref ref-type="bibr" rid="B55">2015</xref>). Patients who are oligosymptomatic are often reluctant to undergo AHSCT due to its high morbidity and mortality risk. A recent study suggested that the effect of AHSCT may be transient (Baker et al., <xref ref-type="bibr" rid="B5">2017</xref>). Furthermore, a study focusing on the neuromuscular pathology of the small intestine in MNGIE highlighted that AHSCT may be insufficient to restore integrity of the enteric neurons and glia, thus without any short-term impact on the neurogenic and myogenic intestinal changes observed in later stages of MNGIE (Yadak et al., <xref ref-type="bibr" rid="B160">2018a</xref>).</p>
<p>Due to the elevated expression of thymidine phosphorylase in the liver, solid organ transplantation is considered an alternative long-term therapeutic option (Boschetti et al., <xref ref-type="bibr" rid="B17">2014</xref>). A case study has shown that OLT was able to normalize metabolite levels and provide mild improvements of neurological symptoms (De Giorgio et al., <xref ref-type="bibr" rid="B28">2016</xref>; D&#x00027;Angelo et al., <xref ref-type="bibr" rid="B27">2017</xref>). The extent to which tissue damage can be reversed through the clearance of deoxyribonucleoside imbalances post- OLT has yet to be determined (De Giorgio et al., <xref ref-type="bibr" rid="B28">2016</xref>).</p>
<p>Enzyme replacement therapy using autologous erythrocyte-encapsulated thymidine phosphorylase (EETP) is under investigation and has Orphan drug Designation by the FDA and EMA. The rationale for the development of EETP is based on thymidine and deoxyuridine being able to freely diffuse across the erythrocyte membrane via nucleoside transporters into the cell where the encapsulated enzyme catalyses their metabolism to the normal products (Figure <xref ref-type="fig" rid="F6">6</xref>). The products are then free to exit the cell into the blood plasma where they are further metabolized as normal. EETP is directed at ameliorating thymidine and deoxyuridine levels to slow the progression of MNGIE and stabilize the clinical condition and could therefore increase the chance of eligibility for AHSCT or OLT once a match is identified. Encapsulation of enzyme within the erythrocyte has the pharmacological advantages of prolonging the circulatory half-life of the enzyme and potentially minimizing immunogenic reactions which are frequently observed in enzyme replacement therapies administered by the conventional route. To date five patients have received EETP under a compassionate use programme, where clinical and metabolic improvements were observed (Moran et al., <xref ref-type="bibr" rid="B96">2008</xref>; Halter et al., <xref ref-type="bibr" rid="B54">2010</xref>; Godfrin and Bax, <xref ref-type="bibr" rid="B48">2012</xref>; Godfrin et al., <xref ref-type="bibr" rid="B49">2012</xref>; Bax et al., <xref ref-type="bibr" rid="B11">2013</xref>).</p>
<fig id="F6" position="float">
<label>Figure 6</label>
<caption><p>Mechanism of EE-TP action. Plasma thymidine and deoxyuridine enter the erythrocyte via nucleoside transports located in the cell membrane, where the encapsulated thymidine phosphorylase catalyses their metabolism to thymine and uracil. The products are then free to diffuse out of the cell into the blood plasma where they can enter the normal metabolic pathways.</p></caption>
<graphic xlink:href="fgene-09-00669-g0006.tif"/>
</fig>
<p>Promising gene therapies for MNGIE are also under experimentation in murine models, using adenoviral vectors (AVV) targeting the liver for the correction of <italic>TYMP</italic> mutations for the restoration of normalized nucleoside metabolism (Torres-Torronteras et al., <xref ref-type="bibr" rid="B150">2014</xref>). More recently, pre-clinical investigations of hematopoietic stem cell gene therapy in murine models have been conducted (Torres-Torronteras et al., <xref ref-type="bibr" rid="B148">2016</xref>; Yadak et al., <xref ref-type="bibr" rid="B160">2018a</xref>,<xref ref-type="bibr" rid="B161">b</xref>). A timeline of all investigational therapeutic approaches is summarized in Figure <xref ref-type="fig" rid="F7">7</xref>.</p>
<fig id="F7" position="float">
<label>Figure 7</label>
<caption><p>Timeline of pre-clinical and clinical investigational therapeutic approaches for MNGIE.</p></caption>
<graphic xlink:href="fgene-09-00669-g0007.tif"/>
</fig>
</sec>
<sec>
<title>Clinical Efficacy Endpoints</title>
<p>The development of drugs for rare diseases is confounded by a number of challenges such as small patient populations, phenotypic heterogeneity, incomplete knowledge of the disease pathophysiology or natural history and an absence of prior clinical studies. Consequently, the selection of clinical efficacy endpoints, which assess the way a patient feels, functions, or survives, can be an arduous process, particularly as validated endpoints appropriate for the disease are often unavailable.</p>
<p>There are generally no accepted endpoints for clinical studies in patients with MNGIE. This ultra-rare disease presents with usually a combination of cachexia, gastrointestinal dysfunction, and neuromuscular dysfunction. The determinants of morbidity and mortality in patients with MNGIE cannot be easily ascertained and owing to the rarity of the disease, there is no authoritative literature on the topic. The available case series of patients with MNGIE are small and with limited follow-up; the heterogeneity of the sources further limits the possibility to collate this information objectively. Additionally, there are no established patient reported outcomes specific to MNGIE. The experimental treatments for MNGIE aim to reverse the biochemical imbalances by eliminating the elevated systemic concentrations of thymidine and deoxyuridine. However, these metabolites do not provide objective measurements correlated to clinical status and are thus not suitable as end-points for predicting clinical benefit of therapeutic strategies. Several patients reported outcomes are available for specific symptoms or groups of symptoms (e.g., gastrointestinal, neuropathic) which are highly prevalent in patients with MNGIE; however, the extent to which those measurement instruments would be applicable to patients with MNGIE is unknown.</p>
<p>Despite genotypic differences and a variable phenotype, gastrointestinal symptoms including early satiety, nausea, dysphagia, gastroesophageal reflux, postprandial emesis, episodic abdominal pain, episodic abdominal distention, and diarrhea are cardinal manifestations of MNGIE and severely compromise nutritional homeostasis in almost all patients, leading to weight loss and cachexia. One of the largest case series available reports a &#x0201C;thin&#x0201D; body habitus in all patients, with weight loss from diagnosis averaging 15.2 kg (range: 5.9&#x02013;30.0 kg) (Nishino et al., <xref ref-type="bibr" rid="B104">1999</xref>).</p>
<p>Although clinicians treating patients with MNGIE, unanimously agree that weight loss is the key feature of the disease and has a major impact on their functional status, individual weight loss trajectories are not typically available in published case series. The consensus in personal communications with clinicians who treat those patients suggests that patients with MNGIE relentlessly lose weight and that this has a major impact on their functional status. Anecdotal evidence based on a review of case series and case studies in the literature suggests that organ failure, hepatic and gastrointestinal complications associated to cachexia are frequent causes of death in patients with MNGIE (Nishino et al., <xref ref-type="bibr" rid="B106">2000</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>).</p>
<p>The collection of uniform observational data through the operation of patient registries is one approach that is employed to identify suitable efficacy endpoints. Registries are particularly relevant to the field of rare diseases where the disorder has a heterogeneous presentation and information on the natural history is scarce. Of relevance to patients with MNGIE is the Rare Disease Clinical Research Network Natural History Study of MNGIE (NCT01694953) and also the North American Mitochondrial Disease Consortium which is currently collecting medical and family history, diagnostic test results, and prospective medical information; information from this will be invaluable for supporting the evaluation of new treatment modalities.</p>
<p>The Regulatory agencies are now recognizing the need for flexibility in the review of therapies for rare diseases and may consider approving a therapy based on a surrogate endpoint or biomarker as these can provide better objective measures of clinical benefit. Based on the identification of a number of dysregulated miRNAs in the serum of patients with MNGIE compared to age and sex matched healthy controls, Levene et al. are examining the application of a miRNA panel as a surrogate end-point biomarker in parallel with a clinical trial of EETP (Levene et al., <xref ref-type="bibr" rid="B80">in press</xref>).</p>
</sec>
</sec>
<sec id="s10">
<title>Prognosis</title>
<p>MNGIE is a relentlessly progressive degenerative and terminal disorder with a poor prognosis. The estimated mean age of mortality is 37.6 years, with a range of 26&#x02013;58 years (Nishino et al., <xref ref-type="bibr" rid="B106">2000</xref>). Garone et al. reports the use of a Kaplan-Meier analysis, as a valuable instrument to give a reliable prognosis, thus providing the most updated estimates in term of life expectancy to date, indicating that in MNGIE survival lies between 20 and 40 years of age. Common causes of death include malnutrition, metabolic acidosis, aspiration pneumonia, intestinal perforation, peritonitis and complications aroused by bacterial overgrowth (Filosto et al., <xref ref-type="bibr" rid="B39">2011</xref>; Garone et al., <xref ref-type="bibr" rid="B45">2011</xref>).</p>
</sec>
<sec id="s11">
<title>External Resources for Clinicians and Patients</title>
<p>Below we present a list of resources for clinicians and patients:</p>
<list list-type="simple">
<list-item><p><ext-link ext-link-type="uri" xlink:href="https://www.omim.org/entry/603041">https://www.omim.org/entry/603041</ext-link></p></list-item>
<list-item><p><ext-link ext-link-type="uri" xlink:href="https://rarediseases.org/rare-diseases/mitochondrial-neurogastrointestinal-encephalopathy/">https://rarediseases.org/rare-diseases/mitochondrial-neurogastrointestinal-encephalopathy/</ext-link></p></list-item>
<list-item><p><ext-link ext-link-type="uri" xlink:href="https://clinicaltrials.gov/ct2/show/NCT01694953">https://clinicaltrials.gov/ct2/show/NCT01694953</ext-link></p></list-item>
<list-item><p><ext-link ext-link-type="uri" xlink:href="https://www.mitocon.it/classificazione-genetica-delle-malattie-mitocondriali/">https://www.mitocon.it/classificazione-genetica-delle-malattie-mitocondriali/</ext-link></p></list-item>
<list-item><p><ext-link ext-link-type="uri" xlink:href="https://ghr.nlm.nih.gov/condition/mitochondrial-neurogastrointestinal-encephalopathy-disease">https://ghr.nlm.nih.gov/condition/mitochondrial-neurogastrointestinal-encephalopathy-disease</ext-link></p></list-item>
<list-item><p><ext-link ext-link-type="uri" xlink:href="https://www.orpha.net/">https://www.orpha.net/</ext-link></p></list-item>
<list-item><p><ext-link ext-link-type="uri" xlink:href="http://www.telethon.it">www.telethon.it</ext-link></p></list-item>
<list-item><p><ext-link ext-link-type="uri" xlink:href="http://www.pumpa.org.uk/">http://www.pumpa.org.uk/</ext-link></p></list-item>
<list-item><p><ext-link ext-link-type="uri" xlink:href="https://www.thelilyfoundation.org.uk/">https://www.thelilyfoundation.org.uk/</ext-link></p></list-item>
<list-item><p><ext-link ext-link-type="uri" xlink:href="http://www.umdf.org/">http://www.umdf.org/</ext-link></p></list-item>
<list-item><p><ext-link ext-link-type="uri" xlink:href="http://www.mitoaction.org/">http://www.mitoaction.org/</ext-link></p></list-item>
</list>
</sec>
<sec id="s12">
<title>Concluding Remarks</title>
<p>MNGIE is a metabolic disorder with an invariably fatal outcome. In the last 40 years since the first description of MNGIE, considerable progress has been made in the elucidation of the pathogenic mechanisms that underlie this ultra-rare disease. The wealth of knowledge available enabled the canonical and the sporadical features of the pathology to be clearly defined, permitting explicit diagnostic criteria and approaches to be determined. Recently, Zimmer et al. proposed an algorithm for the clinical diagnosis of MNGIE, whereby patients exhibiting suggestive clinical symptoms, such as eye movement disorder, are recommended to undergo cerebral MRI investigations. If leukoencephalopathy is then detected, the algorithm suggests biochemical testing for metabolite excess in biofluids, followed by the sequencing of the <italic>TYMP</italic> gene, should an accumulation of thymidine and deoxyuridine be identified (Zimmer et al., <xref ref-type="bibr" rid="B168">2014</xref>). It is important to highlight however, that MNGIE, as for many other mitochondrial disorders lacks of a prospective natural history study, although one is currently ongoing and pending results. In this respect patient stratification, still remains a substantial challenge. Nevertheless, the advent of NGS, has certainly changed the diagnostic approach toward mitochondrial diseases, including MNGIE, thus reliably improving the screening and clustering of patients. Therefore, in many cases a shift in diagnostic methodologies is observed toward a direct genetic screening (Calvo et al., <xref ref-type="bibr" rid="B18">2012</xref>; Carroll et al., <xref ref-type="bibr" rid="B21">2014</xref>; Craven et al., <xref ref-type="bibr" rid="B25">2017</xref>; Kremer et al., <xref ref-type="bibr" rid="B73">2017</xref>). On the other hand, NGS has not entirely replaced the use of the first line investigations for the identification of MNGIE, i.e., quantifying thymidine and deoxyuridine in plasma and urine. In fact, recent research efforts have been directed at improving the analytical methods used. For instance, optimized and validated methods aimed at simplifying the chromatographic conditions and reducing analytical errors for the quantification of thymidine and deoxyuridine in urine and plasma of MNGIE patients, was developed and compared with previously reported analytical methods (Mohamed et al., <xref ref-type="bibr" rid="B94">2014</xref>; Sun, <xref ref-type="bibr" rid="B143">2016</xref>). It is noteworthy that advancements in experimental therapies for MNGIE are mostly of recent development; indeed, the first published data collection of all patients treated with AHSCT dates back to 2015, sixteen years after the mutation was first identified (Halter et al., <xref ref-type="bibr" rid="B55">2015</xref>). It is also important to note, that predominantly in eastern countries, the most dated therapeutic approach, more specifically peritoneal dialysis and haemodialysis, are still being used in the management of MNGIE (Sivadasan et al., <xref ref-type="bibr" rid="B137">2016</xref>; Chandra et al., <xref ref-type="bibr" rid="B23">2018</xref>). A number of experimental therapies are currently under development with the aim of rescuing the phenotype by restoring homeostatic thymidine phosphorylase activity and/or normalizing systemic deoxyribonucleoside accumulations. Most notably, a recent study conducted by Torres-Torronteras et al., describes a novel promising pre-clinical investigation regarding the long-term efficacy of AVV gene therapy in MNGIE (Torres-Torronteras et al., <xref ref-type="bibr" rid="B148">2016</xref>). However, there is still a substantial gap between pre-clinical trials and the translation of novel treatments into humans. Furthermore, the rarity of the condition and the absence of a natural history study hinders the identification of reliable end-points, further complicating the progression of experimental therapies. In this respect, MNGIE benefits from clinical interest because is one of the few treatable rare mitochondrial disorders (Filosto et al., <xref ref-type="bibr" rid="B37">2018</xref>). With the up and coming clinical trials of these novel therapeutic approaches, including the enzyme replacement therapy under investigation by our group, we believe this comprehensive review will guide and inform clinicians of the intricacies of this rare and fatal disorder, thereby expediting disease diagnosis and treatment access to patients earlier on in the disease process.</p>
</sec>
<sec id="s13">
<title>Author Contributions</title>
<p>DP, ML, CG, NN, and BB contributed to the conception, writing and review of the manuscript.</p>
<sec>
<title>Conflict of Interest Statement</title>
<p>St George&#x00027;s, University of London holds a licencing agreement with Orphan Technologies for the development of an enzyme replacement therapy for MNGIE. The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</sec>
</body>
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<fn-group>
<fn fn-type="financial-disclosure"><p><bold>Funding.</bold> This research was supported by the Purine Metabolic Patients&#x00027; Association (PUMPA) and the Medical Research Council (MRC).</p>
</fn>
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