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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Immunol.</journal-id>
<journal-title>Frontiers in Immunology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Immunol.</abbrev-journal-title>
<issn pub-type="epub">1664-3224</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fimmu.2014.00391</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Immunology</subject>
<subj-group>
<subject>Review Article</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Immunity to HIV in Early Life</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Muenchhoff</surname> <given-names>Maximilian</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="corresp" rid="cor1">&#x0002A;</xref>
<uri xlink:href="http://frontiersin.org/people/u/98473"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Prendergast</surname> <given-names>Andrew J.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Goulder</surname> <given-names>Philip Jeremy Renshaw</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Department of Paediatrics, University of Oxford, Peter Medawar Building for Pathogen Research</institution>, <addr-line>Oxford</addr-line>, <country>UK</country></aff>
<aff id="aff2"><sup>2</sup><institution>Centre for Paediatrics, Blizard Institute, Queen Mary University of London</institution>, <addr-line>London</addr-line>, <country>UK</country></aff>
<aff id="aff3"><sup>3</sup><institution>Zvitambo Institute for Maternal and Child Health Research</institution>, <addr-line>Harare</addr-line>, <country>Zimbabwe</country></aff>
<aff id="aff4"><sup>4</sup><institution>HIV Pathogenesis Programme, Doris Duke Medical Research Institute, Nelson R. Mandela School of Medicine, University of KwaZulu-Natal</institution>, <addr-line>Durban</addr-line>, <country>South Africa</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Arnaud Marchant, Universit&#x000E9; Libre de Bruxelles, Belgium</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Nicolas Chomont, Vaccine and Gene Therapy Institute-Florida, USA; Lisa A. Chakrabarti, Institut Pasteur, France</p></fn>
<corresp content-type="corresp" id="cor1">&#x0002A;Correspondence: Maximilian Muenchhoff, Peter Medawar Building, South Parks Road, OX1 3SY Oxford, UK e-mail: <email>maximilian.muenchhoff&#x00040;yahoo.com</email></corresp>
<fn fn-type="other" id="fn001"><p>This article was submitted to Immunotherapies and Vaccines, a section of the journal Frontiers in Immunology.</p></fn>
</author-notes>
<pub-date pub-type="epreprint">
<day>07</day>
<month>07</month>
<year>2014</year>
</pub-date>
<pub-date pub-type="epub">
<day>12</day>
<month>08</month>
<year>2014</year>
</pub-date>
<pub-date pub-type="collection">
<year>2014</year>
</pub-date><volume>5</volume>
<elocation-id>391</elocation-id>
<history>
<date date-type="received">
<day>23</day>
<month>06</month>
<year>2014</year>
</date>
<date date-type="accepted">
<day>30</day>
<month>07</month>
<year>2014</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2014 Muenchhoff, Prendergast and Goulder.</copyright-statement>
<copyright-year>2014</copyright-year>
<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/3.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>The developing immune system is adapted to the exposure to a plethora of pathogenic and non-pathogenic antigens encountered <italic>in utero</italic> and after birth, requiring a fine balance between protective immunity and immune tolerance. In early stages of life, this tolerogenic state of the innate and adaptive immune system and the lack of immunological memory render the host more susceptible to infectious pathogens like HIV. HIV pathogenesis is different in children, compared to adults, with more rapid disease progression and a substantial lack of control of viremia compared to adults. Plasma viral load remains high during infancy and only declines gradually over several years in line with immune maturation, even in rare cases where children maintain normal CD4 T-lymphocyte counts for several years without antiretroviral therapy (ART). These pediatric slow progressors also typically show low levels of immune activation despite persistently high viremia, resembling the phenotype of natural hosts of SIV infection. The lack of immunological memory places the fetus and the newborn at higher risk of infections; however, it may also provide an opportunity for unique interventions. Frequencies of central memory CD4&#x0002B; T-lymphocytes, one of the main cellular reservoirs of HIV, are very low in the newborn child, so immediate ART could prevent the establishment of persistent viral reservoirs and result in &#x0201C;functional cure.&#x0201D; However, as recently demonstrated in the case report of the &#x0201C;Mississippi child&#x0201D; who experienced viral rebound after more than 2&#x02009;years off ART, additional immunomodulatory strategies might be required for sustained viral suppression after ART cessation. In this review, we discuss the interactions between HIV and the developing immune system in children and the potential implications for therapeutic and prophylactic interventions.</p>
</abstract>
<kwd-group>
<kwd>HIV</kwd>
<kwd>pediatric</kwd>
<kwd>innate immunity</kwd>
<kwd>adaptive immunity</kwd>
<kwd>immune responses</kwd>
<kwd>immune activation</kwd>
<kwd>immune exhaustion</kwd>
<kwd>viral reservoir</kwd>
</kwd-group>
<counts>
<fig-count count="1"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="202"/>
<page-count count="13"/>
<word-count count="13813"/>
</counts>
</article-meta>
</front>
<body>
<sec id="S1" sec-type="introduction">
<title>Introduction</title>
<p>In the dynamic developmental period from fetal life to adolescence, the human organism is more susceptible and vulnerable to chronic viral infections (<xref ref-type="bibr" rid="B1">1</xref>). HIV pathogenesis in early life is characterized by faster disease progression and shorter time to AIDS and death, compared to adults. The innate and adaptive arms of the immune system are more tolerogenic soon after birth and fail to control viral replication in infancy. Persistent viremia, reactivation of co-infections, and microbial translocation during chronic infection drive HIV pathogenesis through increased immune activation, resulting in immune dysregulation and functional immune exhaustion that exacerbate disease progression in a positive feedback loop (<xref ref-type="bibr" rid="B2">2</xref>&#x02013;<xref ref-type="bibr" rid="B4">4</xref>) as visualized in Figure <xref ref-type="fig" rid="F1">1</xref>.</p>
<fig position="float" id="F1">
<label>Figure 1</label>
<caption><p><bold>Schematic representation of components of the developing immune system in HIV infection</bold>. The developing immune system is characterized by an attenuated pro-inflammatory innate immune response with a shift toward Th2/Th17 polarizing cytokines to protect the organism against extracellular pathogens and reduce the risk of autoimmunity and inflammation. A tolerogenic state of the immune system is supported by increased frequencies of regulatory T-cells that suppress the activity of CD4 and CD8 T-cells. Microbial translocation and viral replication result in immune activation and immune exhaustion that lead to immune dysfunction and loss of immune control resulting in further viral replication in a positive feedback loop. Differences in target cell availability and memory differentiation in early life affect the size and composition of the viral reservoir in children. Main aspects of the developing immune system in regards to vertical HIV infection are summarized. Treg: regulatory T-cells; NK cell: natural killer cell; PAMPs: pathogen-associated molecular patterns; CTL: cytotoxic T-lymphocyte.</p></caption>
<graphic xlink:href="fimmu-05-00391-g001.tif"/>
</fig>
<p>However, the recent report of a child who apparently achieved &#x0201C;functional cure&#x0201D; for more than 2&#x02009;years following early therapeutic intervention (<xref ref-type="bibr" rid="B5">5</xref>) has raised major interest in the development of therapeutic strategies that could potentially be applied for cure even beyond the pediatric setting. In this review, we will discuss immunity to HIV in early life and how it affects pathogenesis and disease outcome, but also offers unique opportunities for prophylactic and therapeutic interventions in pediatric HIV infection.</p>
</sec>
<sec id="S2">
<title>Pediatric HIV Infection: Epidemiology</title>
<p>Of the estimated 35 million people living with HIV today, 3.3 million are children (UNAIDS 2013 report). Administration of combination antiretroviral therapy (ART) can reduce risk of transmission to approximately 1&#x02013;2% (<xref ref-type="bibr" rid="B6">6</xref>) and WHO now recommends the use of triple-drug ART regimens in all pregnant and breastfeeding women regardless of CD4 count, either lifelong (formerly referred to as option B&#x0002B;) or only during pregnancy and breastfeeding (formerly referred to as option B) (<xref ref-type="bibr" rid="B7">7</xref>). Despite increasing availability of ART, many women are diagnosed with HIV late in pregnancy and prevention of mother-to-child transmission (PMTCT) coverage rates remain suboptimal in many countries, resulting in 260,000 children becoming newly infected with HIV in 2012.</p>
</sec>
<sec id="S3">
<title>Vertical HIV Transmission</title>
<p>Without PMTCT, the overall risk of HIV transmission is up to 40% in sub-Saharan Africa; infection can occur <italic>in utero</italic> (5&#x02013;10%), intrapartum (15%), or post-partum via breastfeeding (15%) (<xref ref-type="bibr" rid="B8">8</xref>). Interestingly, MTCT rates are much lower (&#x0003C;7%) in the natural hosts of SIV infection (such as sooty mangabeys), compared to humans (30&#x02013;40%) or rhesus macaques (25&#x02013;75%) (<xref ref-type="bibr" rid="B9">9</xref>). During breastfeeding, no transmissions have been observed in sooty mangabeys, despite high plasma and breast milk viral loads (<xref ref-type="bibr" rid="B10">10</xref>). This has been attributed to paucity of CCR5&#x0002B; CD4&#x0002B; target cells for SIV infection (<xref ref-type="bibr" rid="B11">11</xref>), since the vast majority of vertically transmitted SIV/HIV-strains are R5-tropic and therefore depend on CCR5 as a co-receptor to infect CD4&#x0002B; T-cells (<xref ref-type="bibr" rid="B12">12</xref>). Indeed, a recent study has shown very low to absent populations of CCR5&#x0002B; CD4&#x0002B; T-cells in the peripheral blood compartment and especially in the intestinal tract of sooty mangabeys compared to rhesus macaques (<xref ref-type="bibr" rid="B13">13</xref>). In human infants, CCR5&#x0002B; CD4&#x0002B; T-cells are virtually absent in cord blood (<xref ref-type="bibr" rid="B14">14</xref>). However, CCR5&#x0002B; CD4&#x0002B; T-cells are abundant in the intestinal mucosa and these cells are highly susceptible to HIV infection (<xref ref-type="bibr" rid="B15">15</xref>). The increased availability of target cells in the intestinal tract, in combination with the effectiveness of the placental barrier prior to labor, are both likely to contribute to the higher risk of intra- and post-partum, compared to <italic>in utero</italic>, transmission.</p>
</sec>
<sec id="S4">
<title>Clinical Course</title>
<p>Once infection is established, the course of disease progression in vertically infected infants is generally faster than in adults, with a rapid decline of CD4 cells and onset of recurrent infections, failure to thrive, and delayed neurodevelopment. In adult HIV infection, survival times decrease with increasing age at seroconversion, with a median time to AIDS and death of approximately a decade without ART (<xref ref-type="bibr" rid="B16">16</xref>). In contrast, mortality among vertically infected children in Africa exceeds 50% by the age of 2&#x02009;years in the absence of ART (<xref ref-type="bibr" rid="B17">17</xref>). However, precise timing of transmission is an important determinant of survival: in a recent meta-analysis, 1-year mortality was 26% among children infected postnatally through breastfeeding, compared to 52% if infected perinatally (<xref ref-type="bibr" rid="B18">18</xref>). Another study that distinguished <italic>in utero</italic>, intrapartum and postnatal infection found median survival times from infection of 208, 380, and &#x0003E;500&#x02009;days, respectively (<xref ref-type="bibr" rid="B19">19</xref>). Furthermore, lower mortality rates have been observed that the later HIV is acquired postnatally via breastfeeding (<xref ref-type="bibr" rid="B20">20</xref>). Interestingly, a cohort of children with hemophilia, who acquired HIV infection between the age of 5 and 14&#x02009;years, had significantly longer AIDS-free survival times than adults (<xref ref-type="bibr" rid="B16">16</xref>). Long-term survival rates in vertically infected untreated children are estimated to be higher than initially appreciated with a probability of 20&#x02013;30% surviving up to 10&#x02009;years if infected perinatally and 16&#x02009;years if infected via breastfeeding (<xref ref-type="bibr" rid="B20">20</xref>, <xref ref-type="bibr" rid="B21">21</xref>).</p>
<p>Absolute CD4 count and viral load levels, which are well established clinical markers of disease progression in adults, have to be interpreted differently in children. The absolute CD4 count is three- to fourfold higher in the newborn compared to adults and gradually declines with age to reach adult levels after about 6&#x02009;years or later (<xref ref-type="bibr" rid="B22">22</xref>, <xref ref-type="bibr" rid="B23">23</xref>). The percentage of CD4&#x0002B; T-cells is less variable with age and often used as an indicator of CD4 depletion in young children. HIV-1 plasma RNA levels are generally higher in vertically infected children than in adults and peak viremia (in the region of 5&#x02013;7 log copies per milliliter) is observed around 3&#x02009;months of age (<xref ref-type="bibr" rid="B24">24</xref>). Peak viremia is higher in children infected intrapartum than <italic>in utero</italic> (<xref ref-type="bibr" rid="B25">25</xref>) and lower in postnatally infected children, suggesting improved viral control by the more mature immune system (<xref ref-type="bibr" rid="B26">26</xref>, <xref ref-type="bibr" rid="B27">27</xref>). Whereas in adult infection, a steady state viral set point is reached within several weeks of infection (<xref ref-type="bibr" rid="B28">28</xref>, <xref ref-type="bibr" rid="B29">29</xref>), viremia persists at high levels, and only declines slowly until a quasi-set point is reached after several years in children who survive (<xref ref-type="bibr" rid="B30">30</xref>). This gradual control of viral replication has been associated with increasing maturation and development of the immune system (<xref ref-type="bibr" rid="B1">1</xref>).</p>
</sec>
<sec id="S5">
<title>Innate Immune System</title>
<p>In the initial response to infections, the innate immune system performs two broad roles. On the one hand, it directly inactivates or attenuates invading pathogens, and on the other hand, it instructs the adaptive arm of the immune system to generate appropriate effector responses. Innate immune cells, such as macrophages, monocytes, and dendritic cells interact with pathogen-associated molecular patterns (PAMPs) through pattern recognition receptors (PRRs) that have evolved as substrate-specific receptors that can discriminate between self- and non-self and constantly sample the intra- and extracellular milieu [reviewed in Ref. (<xref ref-type="bibr" rid="B31">31</xref>)]. PRRs include the Toll-like receptors (TLRs), which are mainly located within the membranes of the cell surface and endosomes, and intracellular sensors such as RIG-1 like receptors (RLRs). HIV is principally detected by the innate immune system through the recognition of viral nucleic acids that are present in the cytosol of productively infected cells during the viral replication cycle and in the endosomes of phagocytosing cells. For example, cell-free virus that is phagocytosed by dendritic cells is recognized in the endosome by TLR-7 and TLR-9, which bind single-stranded RNA and DNA, respectively. Most PAMP/PRR interactions activate signaling pathways that converge in transcriptional activation of pro-inflammatory cytokines and type-1 interferons (IFNs). Type 1 IFNs bind to receptors of infected and neighboring cells and induce expression of IFN-stimulated genes (ISGs) that synergistically inhibit viral replication and spread (<xref ref-type="bibr" rid="B32">32</xref>).</p>
<p>The importance of these innate immune mechanisms in viral infections has been demonstrated in children with gene mutations in the TLR3 signaling pathway, who are prone to severe herpes simplex encephalitis (<xref ref-type="bibr" rid="B33">33</xref>). Certain polymorphisms in the TLR-9 gene were associated with increased risk of mother-to-child transmission of HIV in one study (<xref ref-type="bibr" rid="B34">34</xref>), but further independent studies on innate immune signaling in pediatric HIV infection are required. Genetic polymorphisms of APOBEC3G, a host restriction factor that is induced by type-1 IFNs and directly inhibits replication of HIV, are associated with increased viral loads (<xref ref-type="bibr" rid="B35">35</xref>), lower CD4 counts (<xref ref-type="bibr" rid="B36">36</xref>), and more rapid disease progression in HIV-infected children (<xref ref-type="bibr" rid="B37">37</xref>).</p>
<p>Antigen-presenting innate immune cells such as dendritic cells play a key role not only in inducing pathways that directly inhibit viral replication but also in regulating the host adaptive immune response to HIV infection. Upon TLR stimulation, neonatal dendritic cells and monocytes are less polyfunctional and produce less type-1 IFNs than adult cells (<xref ref-type="bibr" rid="B38">38</xref>). However, it has been noted that neonatal innate immune cells do not have a generalized deficit in secretion of pro-inflammatory cytokines, but rather display distinct cytokine profiles to shape differential adaptive immune responses compared to adults. The most consistently reported difference in neonatal innate immune cell cytokine patterns is a relatively low production of Th1-polarizing cytokines, such as Interleukin-12 and IFN-gamma, in favor of Th2- and Th17-inducing Interleukin-10, Interleukin-6, and Interleukin-23 (<xref ref-type="bibr" rid="B38">38</xref>, <xref ref-type="bibr" rid="B39">39</xref>) [reviewed in Ref. (<xref ref-type="bibr" rid="B40">40</xref>)]. This immunoregulatory strategy has likely evolved for two reasons: first, to dampen pro-inflammatory Th1 responses that could be damaging <italic>in utero</italic> and after birth when the newborn is exposed to an abundance of newly encountered antigens; and second, to ensure protection against extracellular bacterial and fungal pathogens, which can be rapidly fatal soon after birth (<xref ref-type="bibr" rid="B40">40</xref>). However, as a trade-off, the skewed Th1/Th2 ratio leaves the infant more susceptible to intracellular pathogens such as HIV [reviewed in Ref. (<xref ref-type="bibr" rid="B1">1</xref>)]. Interestingly, HIV-exposed but uninfected children show enhanced pro-inflammatory cytokine responses upon stimulation of innate immune cells compared to unexposed children, indicating that altered innate immune ontogeny could contribute to the increased vulnerability of this population to morbidity and poor growth (<xref ref-type="bibr" rid="B41">41</xref>).</p>
<p>The intrinsically low level of Th1 responses induced by neonatal innate immune cells is reinforced by the dysregulation and depletion of dendritic cells upon HIV infection [reviewed in Ref. (<xref ref-type="bibr" rid="B42">42</xref>)]. Most studies have been undertaken in chronically HIV-infected adults, but perinatally infected children also have reduced frequencies and functionality of dendritic cells and other innate immune cell populations including natural killer (NK) cells (<xref ref-type="bibr" rid="B43">43</xref>&#x02013;<xref ref-type="bibr" rid="B45">45</xref>).</p>
<p>Natural killer cells are innate lymphocytes that play a critical role in the control of viral infections through interactions with other host immune cells via the secretion of chemokines and cytokines or by direct cellular cytotoxicity against infected target cells [reviewed in Ref. (<xref ref-type="bibr" rid="B46">46</xref>)]. NK cells recognize infected cells either through interaction with antibodies bound to the target cell surface in a process termed antibody-dependent cellular cytotoxicity (ADCC) or through interactions of an intricate network of inhibitory and activating cell surface receptors with ligands on infected cells. For example, NK cells are activated by reduced expression levels of MHC-class-I-molecules on the cell surface of HIV-infected cells via signaling of the inhibitory killer cell Ig-like receptors (KIRs), which is an important complementary mechanism to CD8 T-cell responses that depend on MHC-class-I-recognition [reviewed in Ref. (<xref ref-type="bibr" rid="B47">47</xref>)].</p>
<p>Frequencies of neonatal NK cells are similar to adults (<xref ref-type="bibr" rid="B48">48</xref>), but there are differences in expression patterns of inhibitory and activating cell surface receptors (<xref ref-type="bibr" rid="B49">49</xref>) and reduced cytotoxic activity of cord blood NK cells has been reported consistently (<xref ref-type="bibr" rid="B50">50</xref>, <xref ref-type="bibr" rid="B51">51</xref>) [reviewed in Ref. (<xref ref-type="bibr" rid="B52">52</xref>)]. NK cells isolated from vertically HIV-infected children have decreased cytolytic activity compared to uninfected children (<xref ref-type="bibr" rid="B53">53</xref>) and exhibit reduced ADCC compared to adult cells (<xref ref-type="bibr" rid="B54">54</xref>), but neonatal NK cells have been shown to be capable of suppressing replication of CCR5-tropic HIV <italic>in vitro</italic> through a non-cytotoxic chemokine-mediated mechanism (<xref ref-type="bibr" rid="B55">55</xref>). Total numbers of NK cells in vertically HIV-infected children decline with age (<xref ref-type="bibr" rid="B56">56</xref>) and are only partially reconstituted upon initiation of ART (<xref ref-type="bibr" rid="B45">45</xref>). Vertical HIV infection is also associated with increased NK cell activation, differentiation, and loss of perforin expression, which might impair NK cell function and compromise their role in protecting the organism against HIV, co-infections, and cancer (<xref ref-type="bibr" rid="B56">56</xref>).</p>
</sec>
<sec id="S6">
<title>Developing Immune System: Immune Tolerance and Tregs</title>
<p>The maternal and fetal immune systems are finely adapted toward increased immunological tolerance to avoid uncontrolled damage to the fetus by allogeneic T-cells from the mother on the one hand and pathological reactions to maternal- and self-antigens by the fetus on the other (<xref ref-type="bibr" rid="B1">1</xref>). There is immune adaptation away from Th1 and toward Th2 responses during pregnancy (<xref ref-type="bibr" rid="B57">57</xref>), although the concept of pregnancy as a generalized state of immunosuppression is no longer supported (<xref ref-type="bibr" rid="B58">58</xref>, <xref ref-type="bibr" rid="B59">59</xref>): for example, pregnant women appear to respond well to vaccines during pregnancy (<xref ref-type="bibr" rid="B60">60</xref>&#x02013;<xref ref-type="bibr" rid="B62">62</xref>), and even mount anti-fetal CD8&#x0002B; T-cell response without pregnancy loss (<xref ref-type="bibr" rid="B63">63</xref>). The hyporesponsiveness of the fetal adaptive immune system to antigens was previously interpreted as a functional deficit of effector cells, whereas currently the induction of immune tolerance is thought to be an active process that is largely mediated by regulatory T-cells (Tregs) [reviewed in Ref. (<xref ref-type="bibr" rid="B64">64</xref>)]. After depletion of CD4&#x0002B; CD25&#x0002B; FoxP3&#x0002B; Tregs, fetal CD4 and CD8 T-cells have been shown to be highly responsive to stimulation <italic>ex vivo</italic> (<xref ref-type="bibr" rid="B65">65</xref>). <italic>In utero</italic> exposure to maternal alloantigens induces the development of tolerogenic Tregs that suppress activity of effector T-cells and persist into adulthood (<xref ref-type="bibr" rid="B66">66</xref>). The abundant population of Tregs that peaks in the second trimester and gradually declines to adult levels around birth (<xref ref-type="bibr" rid="B67">67</xref>) has been shown to originate from fetal hematopoetic stem cells (HSC); these differ from adult HSC based on functional and transcriptional analyses and give rise to a distinct lymphocyte lineage (<xref ref-type="bibr" rid="B68">68</xref>).</p>
<p>The role of Tregs in the pathogenesis of HIV infection remains controversial, but several studies have proposed a modulating function in HIV-specific immune responses, chronic immune activation, and inflammation [reviewed in (<xref ref-type="bibr" rid="B69">69</xref>)]. Most studies have reported a decrease in absolute numbers of Tregs in chronic HIV infection; however, as the frequency of Tregs is often reported as a percentage of CD4&#x0002B; T-cells, there appears to be a selective expansion of different Treg subsets within the CD4 population during the CD4 decline that characterizes chronic infection (<xref ref-type="bibr" rid="B70">70</xref>). In HIV-infected children, one study found a positive correlation between the proportion of Tregs and HIV viral load, and a negative correlation with CD4 count suggesting a selective expansion of Tregs in pediatric HIV infection (<xref ref-type="bibr" rid="B71">71</xref>). Interestingly, in the same study these increased frequencies of Tregs also correlated with the proportion of activated CD8&#x0002B; T-cells, suggesting the ineffectiveness of these cells to limit immune activation. However, another study in vertically HIV-infected children, showed a depletion of Tregs compared to HIV-negative children when measured as proportion of total T-cells (CD3&#x0002B; lymphocytes) that was associated with increased levels of immune activation (<xref ref-type="bibr" rid="B72">72</xref>). Another study found an association between altered frequencies of Treg subsets and autoantibody production in HIV-positive children highlighting the potential role of Tregs in immunoregulatory pathways that may be disrupted in HIV infection (<xref ref-type="bibr" rid="B73">73</xref>). In HIV-exposed but uninfected infants, a significant increase in HIV-specific CD4&#x0002B; and CD8&#x0002B; T-cell responses was observed after depletion of Tregs in cord blood mononuclear cells <italic>in vitro</italic> (<xref ref-type="bibr" rid="B73">73</xref>, <xref ref-type="bibr" rid="B74">74</xref>) indicating a suppressive function in pathogen-specific adaptive immunity.</p>
</sec>
<sec id="S7">
<title>Adaptive Immunity: CD8 T Cells</title>
<p>HIV-specific CD8&#x0002B; T cells are thought to play a key role in control of viral replication based on studies in humans (<xref ref-type="bibr" rid="B75">75</xref>, <xref ref-type="bibr" rid="B76">76</xref>) and SIV-infected monkey models (<xref ref-type="bibr" rid="B77">77</xref>, <xref ref-type="bibr" rid="B78">78</xref>). In adults, the rapid decline in viral load during acute infection from several million copies/ml to a viral load set point 3 logs lower is temporally associated with the appearance of HIV-specific CD8&#x0002B; T-cells (<xref ref-type="bibr" rid="B75">75</xref>, <xref ref-type="bibr" rid="B76">76</xref>, <xref ref-type="bibr" rid="B79">79</xref>). Cytotoxic CD8&#x0002B; T cells interact directly with HIV-infected target cells via the T-cell receptor that recognizes viral peptides presented on the cell surface by MHC-class-I molecules. The HLA-class-I type of an individual affects the rate of disease progression: certain HLA alleles such as HLA-B35 are associated with more rapid progression to AIDS, whereas protective alleles such as HLA-B57 and HLA-B27 are associated with viremic control and slow disease progression (<xref ref-type="bibr" rid="B80">80</xref>). One of the main mechanisms proposed for the protective effect of these alleles is their peptide binding specificity, allowing CD8&#x0002B; T cells to target epitopes located particularly in the Gag region, in which an escape mutation that would evade the immune response is associated with a high cost in viral fitness (<xref ref-type="bibr" rid="B81">81</xref>, <xref ref-type="bibr" rid="B82">82</xref>). Transmission of viral variants with an accumulation of costly escape mutations that reduce viral replicative capacity facilitates containment of HIV in the new host and reduces viral load and loss of CD4 cells (<xref ref-type="bibr" rid="B83">83</xref>, <xref ref-type="bibr" rid="B84">84</xref>).</p>
<p>In pediatric HIV infection, the HLA type of both mother and child is of relevance for disease progression in the child. In mothers with protective HLA alleles, the virus accumulates immune escape mutations that are associated with a loss of viral fitness, thereby attenuating the transmitted virus, resulting in slower disease progression in the child (<xref ref-type="bibr" rid="B85">85</xref>). However, as the child inherits 50% of the HLA alleles from the mother, the virus can be partially pre-adapted to the shared alleles so that the recipient child cannot mount an effective immune response against the escaped epitopes and fails to contain viral replication (<xref ref-type="bibr" rid="B86">86</xref>). The beneficial effect of protective HLA alleles is therefore greatest if they are not shared between mother and child, and the child can employ them to mount effective immune responses (<xref ref-type="bibr" rid="B85">85</xref>). In a study of vertically HIV-infected children and adolescents, the protective allele HLA-B57 was overrepresented in the group of children with slow disease progression (<xref ref-type="bibr" rid="B87">87</xref>). In a recent genomic study of over 1000 vertically HIV-infected children, the protective HLA alleles HLA-B57, -B27, -B14, -Cw8, and -DRB1&#x0002A;10 were the SNPs most strongly associated with low baseline HIV-RNA levels (<xref ref-type="bibr" rid="B35">35</xref>).</p>
<p>The adaptive immune system starts to develop as early as 7&#x02013;9&#x02009;weeks of gestation when T-cell progenitor cells populate the thymus (<xref ref-type="bibr" rid="B88">88</xref>). In vertically HIV-infected children, HIV-specific CD8&#x0002B; T cell responses can be detected from birth (<xref ref-type="bibr" rid="B89">89</xref>, <xref ref-type="bibr" rid="B90">90</xref>), but less frequently and at a lower magnitude than in older children or adults (<xref ref-type="bibr" rid="B90">90</xref>&#x02013;<xref ref-type="bibr" rid="B92">92</xref>). However, these responses seem to be insufficient to control viremia, as there is typically no rapid decline in viral load in pediatric HIV infection as opposed to the decline in viral load after acute infection in adults [see above and Ref. (<xref ref-type="bibr" rid="B25">25</xref>)]. In infants, neither breadth nor magnitude of HIV-specific CD8 T-cell responses at 1&#x02009;month of age correlate with viremic control or survival at 12&#x02009;months (<xref ref-type="bibr" rid="B93">93</xref>), but Gag-specific CD8 T cell responses are higher in infants who survive to 1&#x02009;year of age (<xref ref-type="bibr" rid="B94">94</xref>). The magnitude and breadth of Gag-specific CD8 T cell responses correlated negatively with viral load in one study (<xref ref-type="bibr" rid="B95">95</xref>), but not in another (<xref ref-type="bibr" rid="B96">96</xref>). Also, in a study of older children and adolescents who were categorized as progressors and non-progressors, there was no difference in magnitude and breadth of HIV-specific CD8 T cell responses between the two groups (<xref ref-type="bibr" rid="B87">87</xref>). However, magnitude and breadth of HIV-specific CD8 responses increase with age (<xref ref-type="bibr" rid="B90">90</xref>, <xref ref-type="bibr" rid="B92">92</xref>, <xref ref-type="bibr" rid="B96">96</xref>).</p>
<p>Broad Gag-specific CD8&#x0002B; T cell responses have consistently been shown to be associated with reduced viral load (<xref ref-type="bibr" rid="B97">97</xref>, <xref ref-type="bibr" rid="B98">98</xref>) in HIV-infected adults. But whereas Gag is the most immunogenic HIV-protein in adults, infants preferentially target epitopes in the more variable proteins Env and Nef (<xref ref-type="bibr" rid="B92">92</xref>, <xref ref-type="bibr" rid="B95">95</xref>) with an increasing proportion of Gag-specific responses only later in life (<xref ref-type="bibr" rid="B95">95</xref>).</p>
<p>In addition to the specificity and magnitude, the effectiveness of a CD8 T cell response to control viral replication is also determined by its quality as measured by the ability to degranulate and produce different effector cytokines simultaneously (<xref ref-type="bibr" rid="B99">99</xref>, <xref ref-type="bibr" rid="B100">100</xref>). The frequency of HIV-specific CD8 T cell that exhibit three different effector functions or more (CD107&#x0002B;, IL-2&#x0002B;, IFN-gamma&#x0002B;) is reduced in children younger than 2&#x02009;years but increases with age (<xref ref-type="bibr" rid="B95">95</xref>). In another study, the functional profile of HIV-specific CD8 T cell responses predicted the rate of subsequent disease progression in perinatally HIV-infected infants showing that more polyfunctional responses were associated with slower disease progression (<xref ref-type="bibr" rid="B101">101</xref>).</p>
<p>Other functional measures that have been described for effective CD8 T cell responses include the proliferative capacity of a T cell clone upon antigen stimulation <italic>in vitro</italic> (<xref ref-type="bibr" rid="B102">102</xref>). In children, the proliferative capacity of HIV-specific CD8 T cells has thus far not been studied in detail and published data are only available for CD4 T cells at present.</p>
</sec>
<sec id="S8">
<title>Adaptive Immunity: CD4 T cells</title>
<p>To maintain fully functional CD8&#x0002B; T cell responses, the help of CD4&#x0002B; T cells with the same antigen-specificity is required (<xref ref-type="bibr" rid="B103">103</xref>, <xref ref-type="bibr" rid="B104">104</xref>). In the mouse model, depletion of CD4 T helper cells during acute infection results in ineffective CD8 T cell memory responses (<xref ref-type="bibr" rid="B105">105</xref>, <xref ref-type="bibr" rid="B106">106</xref>). CD4&#x0002B; T cells are the major target for HIV and massive depletion of CD4&#x0002B; T cells results during acute infection in adults (<xref ref-type="bibr" rid="B107">107</xref>, <xref ref-type="bibr" rid="B108">108</xref>), with ongoing preferential infection of activated and HIV-specific CD4 T cells in chronic infection (<xref ref-type="bibr" rid="B109">109</xref>). This depletion of HIV-specific CD4&#x0002B; T helper cells has been proposed as a main mechanism for failure to control HIV successfully, given their central role in orchestrating diverse cellular and humoral immune functions (<xref ref-type="bibr" rid="B110">110</xref>).</p>
<p>In addition to providing help to CD8 T cells (<xref ref-type="bibr" rid="B111">111</xref>), HIV-specific CD4 T cells have been shown to have intrinsic direct cytotoxic activity against infected cells (<xref ref-type="bibr" rid="B112">112</xref>&#x02013;<xref ref-type="bibr" rid="B114">114</xref>). Increased breadth, especially of Gag-specific CD4 T cell responses, is inversely correlated to viral load in chronically infected adults; elite or viremic controllers show a higher ratio of Gag- vs. Env-specific CD4 responses (<xref ref-type="bibr" rid="B115">115</xref>). Another study in a large cohort of ART-na&#x000EF;ve HIV-1-clade-C infected adults also found that the magnitude of Gag-specific CD4 T cell responses was associated with higher CD4 counts and lower viral loads (<xref ref-type="bibr" rid="B116">116</xref>).</p>
<p>As discussed above in relation to innate immunity, there is a selective impairment of CD4 T cell responses in early childhood with a shift from Th1 toward Th2 type responses (<xref ref-type="bibr" rid="B117">117</xref>, <xref ref-type="bibr" rid="B118">118</xref>) and poor generation of persistent Th1 memory responses (<xref ref-type="bibr" rid="B119">119</xref>). This has been attributed to low production of Interleukin-12 (<xref ref-type="bibr" rid="B120">120</xref>), which is required for Th1-polarization and maintenance of Th1 effector functions (<xref ref-type="bibr" rid="B121">121</xref>, <xref ref-type="bibr" rid="B122">122</xref>), but does not reach adult levels until adolescence. The bias toward Th2 responses in early life is reinforced by the increased capacity of neonatal monocytes and dendritic cells to produce Interleukin-10, an immunomodulatory cytokine that induces a shift of T cell induction toward Th2 and Th17 profiles (<xref ref-type="bibr" rid="B38">38</xref>).</p>
<p>During fetal development in non-pathologic sterile conditions, the T cell compartment is considered to be mostly na&#x000EF;ve and tolerogenic, although a recent study highlighted the existence of CD4 T cell effector memory subsets with Th1, Th2, and Th17 functional profiles in cord blood of healthy newborn infants (<xref ref-type="bibr" rid="B123">123</xref>). HIV-specific CD4 T cell responses can be primed <italic>in utero</italic> (<xref ref-type="bibr" rid="B124">124</xref>), but are detected in infants at significantly lower frequencies than in chronically infected adults and increase with age (<xref ref-type="bibr" rid="B92">92</xref>, <xref ref-type="bibr" rid="B95">95</xref>). These low levels of HIV-specific Th1 responses in early life coincide with the Th1/Th2 bias and the expanded population of suppressive regulatory T cells as described above. In the macaque model, SIV-specific CD4 T cell responses are suppressed in infants by regulatory T cells that show greater <italic>in vitro</italic> suppressive activity and are present at higher frequencies than in adults and have been associated with impaired immune control (<xref ref-type="bibr" rid="B125">125</xref>).</p>
<p>Gag-specific CD4 T cell responses were detectable at higher frequencies at 3&#x02009;months of age in vertically HIV-infected children who survived to 12&#x02009;months, compared to those who died, and Gag-specific responses at 3 and 6&#x02009;months of age were negatively correlated with VL (<xref ref-type="bibr" rid="B94">94</xref>). Another study detected Gag-specific CD4 responses only in a minority of older vertically infected children (median age 9.9&#x02009;years). Those with detectable responses had lower viral loads than non-responders and the magnitude of the response was inversely correlated with viral load; no association was observed between CD8 T cell responses and viral load (<xref ref-type="bibr" rid="B96">96</xref>).</p>
<p>The functional capability of CD4 T cells to produce IL-2 is causally linked to the proliferative capacity of both CD4 and CD8 T cell subsets, a parameter consistently correlated with immune control and slow disease progression [reviewed in Ref. (<xref ref-type="bibr" rid="B126">126</xref>)]. HIV-specific proliferative responses of CD4 T cells are detected only in a fraction of viremic chronically infected adults and are inversely correlated with VL if present (<xref ref-type="bibr" rid="B127">127</xref>, <xref ref-type="bibr" rid="B128">128</xref>); IL-2 producing HIV-specific CD4 responses are associated with slow disease progression in adults (<xref ref-type="bibr" rid="B129">129</xref>, <xref ref-type="bibr" rid="B130">130</xref>). Interleukin-2 is also important for the differentiation, activation, and proliferation of NK cells, Th1 and Th2 CD4 T cells, B cells, Tregs, and memory CD8 T cells, highlighting the key immunoregulatory role of these CD4 T cells in the immune response (<xref ref-type="bibr" rid="B131">131</xref>).</p>
<p>The proliferative capacity of HIV-specific CD4 T cells is selectively impaired in vertically infected children with uncontrolled viral replication (<xref ref-type="bibr" rid="B124">124</xref>, <xref ref-type="bibr" rid="B132">132</xref>), but, in contrast to adult infection, can be rescued with administration of ART (<xref ref-type="bibr" rid="B133">133</xref>). The magnitude of the response increases with age and is strongest in children maintaining viral suppression on ART (<xref ref-type="bibr" rid="B133">133</xref>). Interestingly, proliferative and IL-2 producing CD4 responses were also detected in HIV-exposed uninfected infants but were mostly absent in infected children (<xref ref-type="bibr" rid="B134">134</xref>). Polyfunctional HIV-specific CD4 T cell responses, especially Interleukin-2 producing cells, were less frequently detected in younger children, but if present, they were associated with low viral loads and remarkably slow disease progression (<xref ref-type="bibr" rid="B95">95</xref>). However, it remains unclear whether these responses actually mediate viral control or are simply a proxy for undisrupted immunoregulatory networks.</p>
</sec>
<sec id="S9">
<title>Immune Exhaustion</title>
<p>Chronic HIV infection and persistent antigenic stimulation lead to more terminally differentiated T cell populations with loss of effector functions and proliferative capacity upon antigenic stimulation [reviewed in Ref. (<xref ref-type="bibr" rid="B3">3</xref>)]. This state of &#x0201C;<xref ref-type="sec" rid="S9">Immune Exhaustion</xref>&#x0201D; is characterized by the upregulation of inhibitory co-receptors on CD4 and CD8 T cells such as PD-1 (<xref ref-type="bibr" rid="B135">135</xref>, <xref ref-type="bibr" rid="B136">136</xref>), Tim-3 (<xref ref-type="bibr" rid="B137">137</xref>), CD160 (<xref ref-type="bibr" rid="B138">138</xref>), LAG-3 (<xref ref-type="bibr" rid="B139">139</xref>), and CTLA-4 (<xref ref-type="bibr" rid="B140">140</xref>) that correlate with markers of disease progression in chronic HIV infection (<xref ref-type="bibr" rid="B136">136</xref>, <xref ref-type="bibr" rid="B137">137</xref>, <xref ref-type="bibr" rid="B139">139</xref>&#x02013;<xref ref-type="bibr" rid="B141">141</xref>). As immune functions can be partially restored upon antibody-mediated blockade of these receptors (<xref ref-type="bibr" rid="B136">136</xref>, <xref ref-type="bibr" rid="B137">137</xref>, <xref ref-type="bibr" rid="B139">139</xref>, <xref ref-type="bibr" rid="B140">140</xref>), they present an attractive target for immunotherapeutic intervention in HIV infection, although immune-related adverse events remain a concern (<xref ref-type="bibr" rid="B142">142</xref>, <xref ref-type="bibr" rid="B143">143</xref>).</p>
<p>In pediatric subjects, few studies have been conducted to elucidate the role of immune exhaustion in chronic HIV infection. One study found an expansion of Tim-3&#x0002B; CD4 and CD8 T cells in vertically HIV-infected adolescents and a correlation of Tim-3 expression on CD8 T cells with viral load (<xref ref-type="bibr" rid="B144">144</xref>). In the same study, PD-1 expression only correlated with the frequency of activated CD8 T cells. This is consistent with another report that described a correlation of PD-1 expression on CD8 T cells with immune activation markers and the magnitude of HIV-specific CD8 T cell responses, but not with viral load, suggesting that immune exhaustion is driven more by chronic immune activation than directly by viral replication (<xref ref-type="bibr" rid="B96">96</xref>).</p>
</sec>
<sec id="S10">
<title>Immune Activation</title>
<p>Persistent systemic immune activation plays a key role in the pathogenesis of HIV infection and is regarded as the driving force in generalized immune dysregulation, chronic inflammation (<xref ref-type="bibr" rid="B145">145</xref>, <xref ref-type="bibr" rid="B146">146</xref>), depletion of CD4 T cells (<xref ref-type="bibr" rid="B147">147</xref>, <xref ref-type="bibr" rid="B148">148</xref>), and progression to AIDS (<xref ref-type="bibr" rid="B149">149</xref>) [reviewed in (<xref ref-type="bibr" rid="B4">4</xref>)]. Recent studies suggest that much of the CD4 depletion is caused by a process called &#x0201C;pyroptosis,&#x0201D; whereby abortive HIV infection of CD4&#x0002B; T cells causes a highly inflammatory form of cell death, which drives accumulation of further CD4 cells and an ongoing cycle of inflammation and cell death (<xref ref-type="bibr" rid="B150">150</xref>, <xref ref-type="bibr" rid="B151">151</xref>). T cell immune activation, as commonly measured by expression of activation markers such as HLA-DR and CD38 on CD4 and CD8 T cells, is a stronger predictor of disease progression than viral load in adults (<xref ref-type="bibr" rid="B152">152</xref>). Similarly, in vertically HIV-infected infants, the subsequent rate of disease progression can be predicted by T cell activation levels at 1&#x02013;2&#x02009;months of age (<xref ref-type="bibr" rid="B153">153</xref>). Both CD4 and CD8 immune activation show a strong inverse correlation with CD4 percentage, but interestingly no correlation is observed between immune activation and viral load in children (<xref ref-type="bibr" rid="B72">72</xref>, <xref ref-type="bibr" rid="B154">154</xref>). In vertically HIV-infected children who maintain high CD4 counts without ART (often referred to as pediatric slow progressors), immune activation levels are strikingly low despite high viral loads (Muenchhoff et al., unpublished data). This resembles the phenotype of non-pathogenic infection in the natural hosts of SIV, such as African Green Monkeys and Sooty Mangabeys (<xref ref-type="bibr" rid="B155">155</xref>), in whom CD4 counts are maintained despite high levels of viremia, due to attenuated immune activation (<xref ref-type="bibr" rid="B156">156</xref>). In acute infection, sooty mangabeys also show high levels of immune activation and a robust innate immune response that is associated with a generalized upregulation of Interferon Stimulated Genes (ISGs, see innate immunity), but this initial response is rapidly resolved, suggesting the involvement of active immunoregulatory mechanisms that dampen detrimental excessive immune activation (<xref ref-type="bibr" rid="B157">157</xref>).</p>
<p>After initiation of ART, immune activation levels in children and adults decrease (<xref ref-type="bibr" rid="B154">154</xref>) but usually remain elevated compared to HIV-negative controls and this residual immune activation despite ART is associated with incomplete immune reconstitution, increased non-AIDS comorbidities, and mortality (<xref ref-type="bibr" rid="B158">158</xref>&#x02013;<xref ref-type="bibr" rid="B160">160</xref>) [reviewed in Ref. (<xref ref-type="bibr" rid="B161">161</xref>)]. Persistent immune activation is associated with increased levels of pro-inflammatory cytokines and elevated coagulation markers that have been linked to cardiovascular disease and cancer in adults [reviewed in Ref. (<xref ref-type="bibr" rid="B4">4</xref>, <xref ref-type="bibr" rid="B162">162</xref>)], emphasizing a potential role for adjunctive immunomodulatory interventions together with ART to reduce residual immune activation in people living with HIV.</p>
<p>The cause of systemic immune activation in HIV infection has not yet been fully elucidated but appears to arise from a complex interplay between HIV and the host involving several molecular and cellular mechanisms including innate and adaptive immune responses that create a pro-inflammatory milieu, fibrosis of lymphoid tissue, uncontrolled co-infections, and breach of the intestinal barrier resulting in translocation of microbial products into the systemic circulation [reviewed in Ref. (<xref ref-type="bibr" rid="B161">161</xref>)].</p>
</sec>
<sec id="S11">
<title>Microbial Translocation</title>
<p>From early stages of HIV infection, the gastrointestinal tract is a target for HIV-induced pathology, with severe depletion of mucosal CD4 T cells (in particular Th17 cells), dendritic cells, and innate lymphoid cells (<xref ref-type="bibr" rid="B107">107</xref>, <xref ref-type="bibr" rid="B163">163</xref>, <xref ref-type="bibr" rid="B164">164</xref>) disrupting mucosal immunity and the intestinal epithelial architecture [reviewed in (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B165">165</xref>)]. This breach in the mucosal barrier results in translocation of microbial products from the gut into the systemic circulation leading to immune activation (<xref ref-type="bibr" rid="B166">166</xref>). A critical difference between non-pathogenic SIV infection (sooty mangabeys, African green monkeys) and pathogenic infection (rhesus macaques, pig-tailed macaques) is in preservation of CD4&#x0002B; Th17 cells in the sooty mangabeys and African Green monkeys (<xref ref-type="bibr" rid="B167">167</xref>). Markers that are used to measure microbial translocation include direct microbial products like lipopolysaccharide (LPS), a component of the Gram-negative bacterial cell wall, and conserved bacterial ribosomal 16sRNA, or indirect markers such as sCD14 as a soluble marker of monocyte activation (<xref ref-type="bibr" rid="B168">168</xref>).</p>
<p>The immaturity of the gut in early life, characterized by increased epithelial permeability (<xref ref-type="bibr" rid="B169">169</xref>) and the evolution of the gut microbiota following bacterial and viral colonization (<xref ref-type="bibr" rid="B170">170</xref>) might influence the degree of microbial translocation in pediatric populations. Plasma levels of LPS in uninfected children initially increase after birth to reach a plateau at about 6&#x02009;months of age (<xref ref-type="bibr" rid="B171">171</xref>) and then decrease again after the age of 2&#x02009;years (<xref ref-type="bibr" rid="B172">172</xref>).</p>
<p>In vertically HIV-infected infants, levels of microbial translocation are elevated compared to uninfected controls and persist at a higher level after initiation of ART (<xref ref-type="bibr" rid="B173">173</xref>). Persistent microbial translocation correlates with cellular and soluble markers of immune activation in children on ART suggesting an important role in immune reconstitution (<xref ref-type="bibr" rid="B174">174</xref>). In a recent study in untreated HIV-infected children, microbial translocation was strongly correlated with monocyte and T cell activation and PD-1 expression levels on CD4 and CD8 T cells demonstrating the connection between microbial translocation, immune activation, and immune exhaustion (<xref ref-type="bibr" rid="B175">175</xref>).</p>
</sec>
<sec id="S12">
<title>Adaptive Immunity: B Cells and Antibodies</title>
<p>HIV-specific antibodies have been in the focus of intense research for several decades in the quest for a prophylactic HIV vaccine. Recently, hope has been fueled by the results of the RV144 vaccine trial, which showed modest vaccine efficacy (<xref ref-type="bibr" rid="B176">176</xref>) and identified antibodies against the V1V2 HIV-envelope region as a correlate of protection in vaccinees (<xref ref-type="bibr" rid="B177">177</xref>). Antibodies can mediate antiviral activities by binding either to free virus or to viral particles on infected cells. The Fc-region of the bound antibody can mediate phagocytosis of the virus or infected cells, activation of innate immune cells resulting in ADCC against infected cells (see innate immunity), or activation of the complement system leading to opsonization and lysis of the virus or infected cells [reviewed in Ref. (<xref ref-type="bibr" rid="B178">178</xref>)]. An important function of antibodies especially in regard to sterilizing immunity is the ability to neutralize the virus by binding to the viral surface and inhibit cellular infection. The surface of HIV consists of the gp41 trans-membrane protein and the heavily glycosylated gp120 surface protein, which are both highly variable between different viral variants. Therefore, antibodies elicited by an effective protective vaccine would need to be broadly neutralizing across different viral subtypes (<xref ref-type="bibr" rid="B179">179</xref>).</p>
<p>These broadly neutralizing antibodies (bNABs) have been shown to occur naturally in a minority (20%) of HIV-infected subjects over the course of several years post-infection (<xref ref-type="bibr" rid="B180">180</xref>&#x02013;<xref ref-type="bibr" rid="B182">182</xref>) during a process of intense somatic hypermutation (<xref ref-type="bibr" rid="B183">183</xref>). A recent study identified several young children with HIV-specific antibodies that had surprisingly high neutralizing breadth (<xref ref-type="bibr" rid="B184">184</xref>). Interestingly, the proportion of children with high neutralization scores was greater than in large-scale cohort studies of chronically HIV-infected adults and high levels of neutralizing breadth were already reached at an age of &#x0007E;2&#x02009;years, suggesting accelerated affinity maturation. These findings were especially surprising as it had previously been shown that infants produce lower antibody titers with less diversified somatic mutation upon infection and vaccination shortly after birth [reviewed in Ref. (<xref ref-type="bibr" rid="B185">185</xref>)]. As higher set point, viral load levels are associated with increased emergence of bNABs in adults (<xref ref-type="bibr" rid="B186">186</xref>) and in these young children (<xref ref-type="bibr" rid="B184">184</xref>), it has been hypothesized that the high antigenic load in pediatric HIV infection boosts development of NAB breadth. Also other factors like the shift toward Th2 responses in early life (as discussed above) could promote B-cell function and somatic hypermutation. Differential proportions of IgG-subclasses in children with a preponderance of IgG1 and IgG3 (<xref ref-type="bibr" rid="B185">185</xref>) that have higher neutralizing potency (<xref ref-type="bibr" rid="B187">187</xref>, <xref ref-type="bibr" rid="B188">188</xref>) could also contribute to this finding. CD4&#x0002B; T follicular helper (Tfh) cells are thought to be crucial in providing help to B cells in the germinal center to support antibody maturation [reviewed in Ref. (<xref ref-type="bibr" rid="B110">110</xref>)], but there have been no studies of Tfh cells in HIV-infected children to date. Further investigation in this field could yield important findings for vaccine development.</p>
</sec>
<sec id="S13">
<title>Mississippi Child/Reservoir/Cure</title>
<p>The case report of an <italic>in utero</italic> HIV-infected child who appeared to have been &#x0201C;functionally cured&#x0201D; after early initiation of ART was received with much excitement. The child initiated ART within 30&#x02009;h of life and stayed on ART until 18&#x02009;months of age when ART was discontinued by the mother. In subsequent visits to the clinic half a year later and in the successive follow-up period, viral load levels remained undetectable in the absence of ART and no signs of ongoing viral replication or HIV-specific T-cell or antibody responses were detected (<xref ref-type="bibr" rid="B5">5</xref>), hence the child was labeled &#x0201C;functionally cured.&#x0201D; However, after more than 2&#x02009;years of follow up with undetectable HIV-RNA levels after treatment cessation, there was a recent report of rebound viremia in this child.</p>
<p>The main obstacle to HIV eradication is a pool of long-lasting, treatment-resistant viral reservoirs that only decay slowly on ART and are a source for viral rebound after treatment cessation [reviewed in Ref. (<xref ref-type="bibr" rid="B189">189</xref>, <xref ref-type="bibr" rid="B190">190</xref>)]. Different cell types and body compartments are thought to contribute to the viral reservoir, but major sources of replication-competent pro-viral DNA during effective ART are resting central and transitional memory CD4&#x0002B; T cells (<xref ref-type="bibr" rid="B191">191</xref>). In this regard, children might be partially protected against the early establishment of viral reservoirs in these cell populations, because neonates have much lower frequencies of CD4 T cells of central memory phenotype than adults (<xref ref-type="bibr" rid="B22">22</xref>, <xref ref-type="bibr" rid="B23">23</xref>).</p>
<p>The frequency of latently infected CD4 T cells in children strongly depends on early initiation of ART and the time to achieve virologic suppression (<xref ref-type="bibr" rid="B192">192</xref>). A cross-sectional study found low to undetectable levels of integrated pro-viral DNA in CD4 cells of children starting treatment before 6&#x02009;months of age after more than 3&#x02009;years of follow-up (<xref ref-type="bibr" rid="B193">193</xref>). A recent longitudinal study compared perinatally infected youth initiating treatment before or after 3&#x02009;months of age (<xref ref-type="bibr" rid="B194">194</xref>). In contrast to the late treatment group, all children starting ART before 3&#x02009;months had undetectable HIV-RNA plasma levels using highly sensitive assays but integrated pro-viral DNA could be detected by PCR in all subjects even after follow-up periods of up to 17&#x02009;years. In the early-treated group, transitional memory CD4 T cells had a larger contribution to the pool of infected cells than longer lasting central memory CD4 T cells. These findings are consistent with a study of adult post-treatment controllers who initiated ART during acute HIV infection (<xref ref-type="bibr" rid="B195">195</xref>), indicating that early treatment can prevent seeding of long-lived cellular reservoirs. It has to be noted that only a fraction of integrated viral DNA codes for replication-competent virus (<xref ref-type="bibr" rid="B196">196</xref>) and so the standard assay to measure the size of the functional latent viral reservoir at present is a limiting dilution viral outgrowth assay (<xref ref-type="bibr" rid="B197">197</xref>, <xref ref-type="bibr" rid="B198">198</xref>). Using this assay, only one of the early-treated children in this study had inducible replication-competent virus, as opposed to all children receiving ART at a later stage, although limited sample availability in pediatric studies reduces the sensitivity of these assays. Caution also has to be taken as rebound viremia is observed even in patients with extraordinarily low viral burden in the peripheral blood compartment (<xref ref-type="bibr" rid="B199">199</xref>) and a large proportion of the viral reservoir is actually located within the gut and other tissues that are not accessed in most studies (<xref ref-type="bibr" rid="B200">200</xref>). Reliable biomarkers to predict successful drug-free remission upon treatment cessation are therefore needed.</p>
<p>Apart form timing of ART initiation, the size and constitution of the viral reservoir is affected by host immunological factors including persistent immune activation that fuels replenishment of the reservoir during ART [reviewed in Ref. (<xref ref-type="bibr" rid="B161">161</xref>)] and effective immune responses that can reduce the pool of infected memory cells (<xref ref-type="bibr" rid="B201">201</xref>, <xref ref-type="bibr" rid="B202">202</xref>). To achieve a cure of HIV in a broader group of patients will therefore most likely require a multifaceted approach that could include induction of potent HIV-specific immunity prior to reversion of HIV-latency in combination with immunomodulatory interventions.</p>
</sec>
<sec id="S14">
<title>Conclusion</title>
<p>In summary, immunity to HIV in early life differs from that in adulthood not only in quantity but also in quality. This results from the adaptations of the immune system to the abundance of antigenic stimulation and pathogen exposure <italic>in utero</italic> and after birth. The initial ontogeny of the immune system is characterized by a more tolerogenic state of innate and adaptive immunity that prevents potentially harmful autoimmunity and inflammatory responses, and is geared toward preferential protection against extracellular pathogens. As a consequence, vertically acquired HIV infection is poorly controlled and marked by rapid progression to AIDS and death without effective interventions. Chronic infection results in systemic immune activation that drives immunopathology with functional immune exhaustion, increased susceptibility to co-infections, and inflammatory comorbidities. Coverage rates of PMTCT, early infant diagnosis, and pediatric ART need to be improved worldwide to reduce the global disease burden among children. For those children who become infected despite PMTCT, novel therapeutic strategies need to be developed targeting persistent immune dysregulation and the viral reservoir to potentially achieve drug-free remission.</p>
</sec>
<sec id="S15">
<title>Conflict of Interest Statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</body>
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<ref-list>
<title>References</title>
<ref id="B1"><label>1</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Prendergast</surname> <given-names>AJ</given-names></name> <name><surname>Klenerman</surname> <given-names>P</given-names></name> <name><surname>Goulder</surname> <given-names>PJ</given-names></name></person-group>. <article-title>The impact of differential antiviral immunity in children and adults</article-title>. <source>Nat Rev Immunol</source> (<year>2012</year>) <volume>12</volume>(<issue>9</issue>):<fpage>636</fpage>&#x02013;<lpage>48</lpage>.<pub-id pub-id-type="doi">10.1038/nri3277</pub-id><pub-id pub-id-type="pmid">22918466</pub-id></citation></ref>
<ref id="B2"><label>2</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Brenchley</surname> <given-names>JM</given-names></name></person-group>. <article-title>Mucosal immunity in human and simian immunodeficiency lentivirus infections</article-title>. <source>Mucosal Immunol</source> (<year>2013</year>) <volume>6</volume>(<issue>4</issue>):<fpage>657</fpage>&#x02013;<lpage>65</lpage>.<pub-id pub-id-type="doi">10.1038/mi.2013.15</pub-id><pub-id pub-id-type="pmid">23549448</pub-id></citation></ref>
<ref id="B3"><label>3</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Khaitan</surname> <given-names>A</given-names></name> <name><surname>Unutmaz</surname> <given-names>D</given-names></name></person-group>. <article-title>Revisiting immune exhaustion during HIV infection</article-title>. <source>Curr HIV/AIDS Rep</source> (<year>2011</year>) <volume>8</volume>(<issue>1</issue>):<fpage>4</fpage>&#x02013;<lpage>11</lpage>.<pub-id pub-id-type="doi">10.1007/s11904-010-0066-0</pub-id><pub-id pub-id-type="pmid">21188556</pub-id></citation></ref>
<ref id="B4"><label>4</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Paiardini</surname> <given-names>M</given-names></name> <name><surname>Muller-Trutwin</surname> <given-names>M</given-names></name></person-group>. <article-title>HIV-associated chronic immune activation</article-title>. <source>Immunol Rev</source> (<year>2013</year>) <volume>254</volume>(<issue>1</issue>):<fpage>78</fpage>&#x02013;<lpage>101</lpage>.<pub-id pub-id-type="doi">10.1111/imr.12079</pub-id></citation></ref>
<ref id="B5"><label>5</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Persaud</surname> <given-names>D</given-names></name> <name><surname>Gay</surname> <given-names>H</given-names></name> <name><surname>Ziemniak</surname> <given-names>C</given-names></name> <name><surname>Chen</surname> <given-names>YH</given-names></name> <name><surname>Piatak</surname> <given-names>M</given-names> <suffix>Jr.</suffix></name> <name><surname>Chun</surname> <given-names>TW</given-names></name> <etal/></person-group> <article-title>Absence of detectable HIV-1 viremia after treatment cessation in an infant</article-title>. <source>N Engl J Med</source> (<year>2013</year>) <volume>369</volume>(<issue>19</issue>):<fpage>1828</fpage>&#x02013;<lpage>35</lpage>.<pub-id pub-id-type="doi">10.1056/NEJMoa1302976</pub-id><pub-id pub-id-type="pmid">24152233</pub-id></citation></ref>
<ref id="B6"><label>6</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Siegfried</surname> <given-names>N</given-names></name> <name><surname>van der Merwe</surname> <given-names>L</given-names></name> <name><surname>Brocklehurst</surname> <given-names>P</given-names></name> <name><surname>Sint</surname> <given-names>TT</given-names></name></person-group>. <article-title>Antiretrovirals for reducing the risk of mother-to-child transmission of HIV infection</article-title>. <source>Cochrane Database Syst Rev</source> (<year>2011</year>) (<issue>7</issue>):<fpage>CD003510</fpage>.<pub-id pub-id-type="doi">10.1002/14651858.CD003510.pub3</pub-id></citation></ref>
<ref id="B7"><label>7</label><citation citation-type="web"><collab>World Health Organisation</collab>. <source>Consolidated Guidelines on the Use of Antiretroviral Drugs for Treating and Preventing HIV Infection</source>. (<year>2013</year>). Available from: <uri xlink:href="http://wwwwhoint/hiv/pub/guidelines/arv2013/en/">http://wwwwhoint/hiv/pub/guidelines/arv2013/en/</uri></citation></ref>
<ref id="B8"><label>8</label><citation citation-type="journal"><collab>Working Group on Mother-to-Child Transmission of HIV</collab>. <article-title>Rates of mother-to-child transmission of HIV-1 in Africa, America and Europe: results from 13 perinatal studies</article-title>. <source>J Acquir Immune Defic Syndr Hum Retrovirol</source> (<year>1995</year>) <volume>8</volume>:<fpage>506</fpage>&#x02013;<lpage>10</lpage>.<pub-id pub-id-type="doi">10.1097/00042560-199504120-00011</pub-id></citation></ref>
<ref id="B9"><label>9</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chahroudi</surname> <given-names>A</given-names></name> <name><surname>Meeker</surname> <given-names>T</given-names></name> <name><surname>Lawson</surname> <given-names>B</given-names></name> <name><surname>Ratcliffe</surname> <given-names>S</given-names></name> <name><surname>Else</surname> <given-names>J</given-names></name> <name><surname>Silvestri</surname> <given-names>G</given-names></name></person-group>. <article-title>Mother-to-infant transmission of simian immunodeficiency virus is rare in sooty mangabeys and is associated with low viremia</article-title>. <source>J Virol</source> (<year>2011</year>) <volume>85</volume>(<issue>12</issue>):<fpage>5757</fpage>&#x02013;<lpage>63</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.02690-10</pub-id><pub-id pub-id-type="pmid">21450815</pub-id></citation></ref>
<ref id="B10"><label>10</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Amedee</surname> <given-names>AM</given-names></name> <name><surname>Rychert</surname> <given-names>J</given-names></name> <name><surname>Lacour</surname> <given-names>N</given-names></name> <name><surname>Fresh</surname> <given-names>L</given-names></name> <name><surname>Ratterree</surname> <given-names>M</given-names></name></person-group>. <article-title>Viral and immunological factors associated with breast milk transmission of SIV in rhesus macaques</article-title>. <source>Retrovirology</source> (<year>2004</year>) <volume>1</volume>:<fpage>17</fpage>.<pub-id pub-id-type="doi">10.1186/1742-4690-1-17</pub-id><pub-id pub-id-type="pmid">15253769</pub-id></citation></ref>
<ref id="B11"><label>11</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pandrea</surname> <given-names>I</given-names></name> <name><surname>Onanga</surname> <given-names>R</given-names></name> <name><surname>Souquiere</surname> <given-names>S</given-names></name> <name><surname>Mouinga-Ondeme</surname> <given-names>A</given-names></name> <name><surname>Bourry</surname> <given-names>O</given-names></name> <name><surname>Makuwa</surname> <given-names>M</given-names></name> <etal/></person-group> <article-title>Paucity of CD4&#x0002B; CCR5&#x0002B; T cells may prevent transmission of simian immunodeficiency virus in natural nonhuman primate hosts by breast-feeding</article-title>. <source>J Virol</source> (<year>2008</year>) <volume>82</volume>(<issue>11</issue>):<fpage>5501</fpage>&#x02013;<lpage>9</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.02555-07</pub-id><pub-id pub-id-type="pmid">18385229</pub-id></citation></ref>
<ref id="B12"><label>12</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>van&#x02019;t Wout</surname> <given-names>AB</given-names></name> <name><surname>Kootstra</surname> <given-names>NA</given-names></name> <name><surname>Mulder-Kampinga</surname> <given-names>GA</given-names></name> <name><surname>Albrecht-van Lent</surname> <given-names>N</given-names></name> <name><surname>Scherpbier</surname> <given-names>HJ</given-names></name> <name><surname>Veenstra</surname> <given-names>J</given-names></name> <etal/></person-group> <article-title>Macrophage-tropic variants initiate human immunodeficiency virus type 1 infection after sexual, parenteral, and vertical transmission</article-title>. <source>J Clin Invest</source> (<year>1994</year>) <volume>94</volume>(<issue>5</issue>):<fpage>2060</fpage>&#x02013;<lpage>7</lpage>.<pub-id pub-id-type="doi">10.1172/JCI117560</pub-id><pub-id pub-id-type="pmid">7962552</pub-id></citation></ref>
<ref id="B13"><label>13</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chahroudi</surname> <given-names>A</given-names></name> <name><surname>Cartwright</surname> <given-names>E</given-names></name> <name><surname>Lee</surname> <given-names>ST</given-names></name> <name><surname>Mavigner</surname> <given-names>M</given-names></name> <name><surname>Carnathan</surname> <given-names>DG</given-names></name> <name><surname>Lawson</surname> <given-names>B</given-names></name> <etal/></person-group> <article-title>Target cell availability, rather than breast milk factors, dictates mother-to-infant transmission of SIV in sooty mangabeys and rhesus macaques</article-title>. <source>PLoS Pathog</source> (<year>2014</year>) <volume>10</volume>(<issue>3</issue>):<fpage>e1003958</fpage>.<pub-id pub-id-type="doi">10.1371/journal.ppat.1003958</pub-id><pub-id pub-id-type="pmid">24604066</pub-id></citation></ref>
<ref id="B14"><label>14</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shalekoff</surname> <given-names>S</given-names></name> <name><surname>Gray</surname> <given-names>GE</given-names></name> <name><surname>Tiemessen</surname> <given-names>CT</given-names></name></person-group>. <article-title>Age-related changes in expression of CXCR4 and CCR5 on peripheral blood leukocytes from uninfected infants born to human immunodeficiency virus type 1-infected mothers</article-title>. <source>Clin Diagn Lab Immunol</source> (<year>2004</year>) <volume>11</volume>(<issue>1</issue>):<fpage>229</fpage>&#x02013;<lpage>34</lpage>.<pub-id pub-id-type="doi">10.1128/CDLI.11.1.229</pub-id><pub-id pub-id-type="pmid">14715575</pub-id></citation></ref>
<ref id="B15"><label>15</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bunders</surname> <given-names>MJ</given-names></name> <name><surname>van der Loos</surname> <given-names>CM</given-names></name> <name><surname>Klarenbeek</surname> <given-names>PL</given-names></name> <name><surname>van Hamme</surname> <given-names>JL</given-names></name> <name><surname>Boer</surname> <given-names>K</given-names></name> <name><surname>Wilde</surname> <given-names>JC</given-names></name> <etal/></person-group> <article-title>Memory CD4(&#x0002B;)CCR5(&#x0002B;) T cells are abundantly present in the gut of newborn infants to facilitate mother-to-child transmission of HIV-1</article-title>. <source>Blood</source> (<year>2012</year>) <volume>120</volume>(<issue>22</issue>):<fpage>4383</fpage>&#x02013;<lpage>90</lpage>.<pub-id pub-id-type="doi">10.1182/blood-2012-06-437566</pub-id><pub-id pub-id-type="pmid">23033270</pub-id></citation></ref>
<ref id="B16"><label>16</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Babiker</surname> <given-names>A</given-names></name> <name><surname>Darby</surname> <given-names>S</given-names></name> <name><surname>De Angelis</surname> <given-names>D</given-names></name> <name><surname>Ewart</surname> <given-names>D</given-names></name> <name><surname>Porter</surname> <given-names>K</given-names></name> <name><surname>Beral</surname> <given-names>V</given-names></name> <etal/></person-group> <article-title>Time from HIV-1 seroconversion to AIDS and death before widespread use of highly-active antiretroviral therapy: a collaborative re-analysis</article-title>. <source>Lancet</source> (<year>2000</year>) <volume>355</volume>(<issue>9210</issue>):<fpage>1131</fpage>&#x02013;<lpage>7</lpage>.<pub-id pub-id-type="doi">10.1016/S0140-6736(00)02061-4</pub-id><pub-id pub-id-type="pmid">10791375</pub-id></citation></ref>
<ref id="B17"><label>17</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Newell</surname> <given-names>ML</given-names></name> <name><surname>Coovadia</surname> <given-names>H</given-names></name> <name><surname>Cortina-Borja</surname> <given-names>M</given-names></name> <name><surname>Rollins</surname> <given-names>N</given-names></name> <name><surname>Gaillard</surname> <given-names>P</given-names></name> <name><surname>Dabis</surname> <given-names>F</given-names></name> <etal/></person-group> <article-title>Mortality of infected and uninfected infants born to HIV-infected mothers in Africa: a pooled analysis</article-title>. <source>Lancet</source> (<year>2004</year>) <volume>364</volume>(<issue>9441</issue>):<fpage>1236</fpage>&#x02013;<lpage>43</lpage>.<pub-id pub-id-type="doi">10.1016/S0140-6736(04)17140-7</pub-id><pub-id pub-id-type="pmid">15464184</pub-id></citation></ref>
<ref id="B18"><label>18</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Becquet</surname> <given-names>R</given-names></name> <name><surname>Marston</surname> <given-names>M</given-names></name> <name><surname>Dabis</surname> <given-names>F</given-names></name> <name><surname>Moulton</surname> <given-names>LH</given-names></name> <name><surname>Gray</surname> <given-names>G</given-names></name> <name><surname>Coovadia</surname> <given-names>HM</given-names></name> <etal/></person-group> <article-title>Children who acquire HIV infection perinatally are at higher risk of early death than those acquiring infection through breastmilk: a meta-analysis</article-title>. <source>PLoS One</source> (<year>2012</year>) <volume>7</volume>(<issue>2</issue>):<fpage>e28510</fpage>.<pub-id pub-id-type="doi">10.1371/journal.pone.0028510</pub-id><pub-id pub-id-type="pmid">22383946</pub-id></citation></ref>
<ref id="B19"><label>19</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Marinda</surname> <given-names>E</given-names></name> <name><surname>Humphrey</surname> <given-names>JH</given-names></name> <name><surname>Iliff</surname> <given-names>PJ</given-names></name> <name><surname>Mutasa</surname> <given-names>K</given-names></name> <name><surname>Nathoo</surname> <given-names>KJ</given-names></name> <name><surname>Piwoz</surname> <given-names>EG</given-names></name> <etal/></person-group> <article-title>Child mortality according to maternal and infant HIV status in Zimbabwe</article-title>. <source>Pediatr Infect Dis J</source> (<year>2007</year>) <volume>26</volume>(<issue>6</issue>):<fpage>519</fpage>&#x02013;<lpage>26</lpage>.<pub-id pub-id-type="doi">10.1097/01.inf.0000264527.69954.4c</pub-id><pub-id pub-id-type="pmid">17529870</pub-id></citation></ref>
<ref id="B20"><label>20</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Marston</surname> <given-names>M</given-names></name> <name><surname>Becquet</surname> <given-names>R</given-names></name> <name><surname>Zaba</surname> <given-names>B</given-names></name> <name><surname>Moulton</surname> <given-names>LH</given-names></name> <name><surname>Gray</surname> <given-names>G</given-names></name> <name><surname>Coovadia</surname> <given-names>H</given-names></name> <etal/></person-group> <article-title>Net survival of perinatally and postnatally HIV-infected children: a pooled analysis of individual data from sub-Saharan Africa</article-title>. <source>Int J Epidemiol</source> (<year>2011</year>) <volume>40</volume>(<issue>2</issue>):<fpage>385</fpage>&#x02013;<lpage>96</lpage>.<pub-id pub-id-type="doi">10.1093/ije/dyq255</pub-id><pub-id pub-id-type="pmid">21247884</pub-id></citation></ref>
<ref id="B21"><label>21</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ferrand</surname> <given-names>RA</given-names></name> <name><surname>Corbett</surname> <given-names>EL</given-names></name> <name><surname>Wood</surname> <given-names>R</given-names></name> <name><surname>Hargrove</surname> <given-names>J</given-names></name> <name><surname>Ndhlovu</surname> <given-names>CE</given-names></name> <name><surname>Cowan</surname> <given-names>FM</given-names></name> <etal/></person-group> <article-title>AIDS among older children and adolescents in Southern Africa: projecting the time course and magnitude of the epidemic</article-title>. <source>AIDS</source> (<year>2009</year>) <volume>23</volume>(<issue>15</issue>):<fpage>2039</fpage>&#x02013;<lpage>46</lpage>.<pub-id pub-id-type="doi">10.1097/QAD.0b013e32833016ce</pub-id><pub-id pub-id-type="pmid">19684508</pub-id></citation></ref>
<ref id="B22"><label>22</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shearer</surname> <given-names>WT</given-names></name> <name><surname>Rosenblatt</surname> <given-names>HM</given-names></name> <name><surname>Gelman</surname> <given-names>RS</given-names></name> <name><surname>Oyomopito</surname> <given-names>R</given-names></name> <name><surname>Plaeger</surname> <given-names>S</given-names></name> <name><surname>Stiehm</surname> <given-names>ER</given-names></name> <etal/></person-group> <article-title>Lymphocyte subsets in healthy children from birth through 18 years of age: the Pediatric AIDS Clinical Trials Group P1009 study</article-title>. <source>J Allergy Clin Immunol</source> (<year>2003</year>) <volume>112</volume>(<issue>5</issue>):<fpage>973</fpage>&#x02013;<lpage>80</lpage>.<pub-id pub-id-type="doi">10.1016/j.jaci.2003.07.003</pub-id><pub-id pub-id-type="pmid">14610491</pub-id></citation></ref>
<ref id="B23"><label>23</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Schatorje</surname> <given-names>EJ</given-names></name> <name><surname>Gemen</surname> <given-names>EF</given-names></name> <name><surname>Driessen</surname> <given-names>GJ</given-names></name> <name><surname>Leuvenink</surname> <given-names>J</given-names></name> <name><surname>van Hout</surname> <given-names>RW</given-names></name> <name><surname>de Vries</surname> <given-names>E</given-names></name></person-group>. <article-title>Paediatric reference values for the peripheral T cell compartment</article-title>. <source>Scand J Immunol</source> (<year>2012</year>) <volume>75</volume>(<issue>4</issue>):<fpage>436</fpage>&#x02013;<lpage>44</lpage>.<pub-id pub-id-type="doi">10.1111/j.1365-3083.2012.02671.x</pub-id><pub-id pub-id-type="pmid">22420532</pub-id></citation></ref>
<ref id="B24"><label>24</label><citation citation-type="journal"><collab>European Collaborative S</collab>. <article-title>Level and pattern of HIV-1-RNA viral load over age: differences between girls and boys?</article-title> <source>AIDS</source> (<year>2002</year>) <volume>16</volume>(<issue>1</issue>):<fpage>97</fpage>&#x02013;<lpage>104</lpage>.<pub-id pub-id-type="doi">10.1097/00002030-200201040-00012</pub-id><pub-id pub-id-type="pmid">11741167</pub-id></citation></ref>
<ref id="B25"><label>25</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mphatswe</surname> <given-names>W</given-names></name> <name><surname>Blanckenberg</surname> <given-names>N</given-names></name> <name><surname>Tudor-Williams</surname> <given-names>G</given-names></name> <name><surname>Prendergast</surname> <given-names>A</given-names></name> <name><surname>Thobakgale</surname> <given-names>C</given-names></name> <name><surname>Mkhwanazi</surname> <given-names>N</given-names></name> <etal/></person-group> <article-title>High frequency of rapid immunological progression in African infants infected in the era of perinatal HIV prophylaxis</article-title>. <source>AIDS</source> (<year>2007</year>) <volume>21</volume>(<issue>10</issue>):<fpage>1253</fpage>&#x02013;<lpage>61</lpage>.<pub-id pub-id-type="doi">10.1097/QAD.0b013e3281a3bec2</pub-id><pub-id pub-id-type="pmid">17545701</pub-id></citation></ref>
<ref id="B26"><label>26</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Obimbo</surname> <given-names>EM</given-names></name> <name><surname>Wamalwa</surname> <given-names>D</given-names></name> <name><surname>Richardson</surname> <given-names>B</given-names></name> <name><surname>Mbori-Ngacha</surname> <given-names>D</given-names></name> <name><surname>Overbaugh</surname> <given-names>J</given-names></name> <name><surname>Emery</surname> <given-names>S</given-names></name> <etal/></person-group> <article-title>Pediatric HIV-1 in Kenya: pattern and correlates of viral load and association with mortality</article-title>. <source>J Acquir Immune Defic Syndr</source> (<year>2009</year>) <volume>51</volume>(<issue>2</issue>):<fpage>209</fpage>&#x02013;<lpage>15</lpage>.<pub-id pub-id-type="doi">10.1097/QAI.0b013e31819c16d8</pub-id><pub-id pub-id-type="pmid">19504753</pub-id></citation></ref>
<ref id="B27"><label>27</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Biggar</surname> <given-names>RJ</given-names></name> <name><surname>Janes</surname> <given-names>M</given-names></name> <name><surname>Pilon</surname> <given-names>R</given-names></name> <name><surname>Miotti</surname> <given-names>P</given-names></name> <name><surname>Taha</surname> <given-names>TE</given-names></name> <name><surname>Broadhead</surname> <given-names>R</given-names></name> <etal/></person-group> <article-title>Virus levels in untreated African infants infected with human immunodeficiency virus type 1</article-title>. <source>J Infect Dis</source> (<year>1999</year>) <volume>180</volume>(<issue>6</issue>):<fpage>1838</fpage>&#x02013;<lpage>43</lpage>.<pub-id pub-id-type="doi">10.1086/315122</pub-id><pub-id pub-id-type="pmid">10558939</pub-id></citation></ref>
<ref id="B28"><label>28</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lyles</surname> <given-names>RH</given-names></name> <name><surname>Munoz</surname> <given-names>A</given-names></name> <name><surname>Yamashita</surname> <given-names>TE</given-names></name> <name><surname>Bazmi</surname> <given-names>H</given-names></name> <name><surname>Detels</surname> <given-names>R</given-names></name> <name><surname>Rinaldo</surname> <given-names>CR</given-names></name> <etal/></person-group> <article-title>Natural history of human immunodeficiency virus type 1 viremia after seroconversion and proximal to AIDS in a large cohort of homosexual men. Multicenter AIDS Cohort Study</article-title>. <source>J Infect Dis</source> (<year>2000</year>) <volume>181</volume>(<issue>3</issue>):<fpage>872</fpage>&#x02013;<lpage>80</lpage>.<pub-id pub-id-type="doi">10.1086/315339</pub-id><pub-id pub-id-type="pmid">10720507</pub-id></citation></ref>
<ref id="B29"><label>29</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Saathoff</surname> <given-names>E</given-names></name> <name><surname>Pritsch</surname> <given-names>M</given-names></name> <name><surname>Geldmacher</surname> <given-names>C</given-names></name> <name><surname>Hoffmann</surname> <given-names>O</given-names></name> <name><surname>Koehler</surname> <given-names>RN</given-names></name> <name><surname>Maboko</surname> <given-names>L</given-names></name> <etal/></person-group> <article-title>Viral and host factors associated with the HIV-1 viral load setpoint in adults from Mbeya Region, Tanzania</article-title>. <source>J Acquir Immune Defic Syndr</source> (<year>2010</year>) <volume>54</volume>(<issue>3</issue>):<fpage>324</fpage>&#x02013;<lpage>30</lpage>.<pub-id pub-id-type="doi">10.1097/QAI.0b013e3181cf30ba</pub-id><pub-id pub-id-type="pmid">20632457</pub-id></citation></ref>
<ref id="B30"><label>30</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>McIntosh</surname> <given-names>K</given-names></name> <name><surname>Shevitz</surname> <given-names>A</given-names></name> <name><surname>Zaknun</surname> <given-names>D</given-names></name> <name><surname>Kornegay</surname> <given-names>J</given-names></name> <name><surname>Chatis</surname> <given-names>P</given-names></name> <name><surname>Karthas</surname> <given-names>N</given-names></name> <etal/></person-group> <article-title>Age- and time-related changes in extracellular viral load in children vertically infected by human immunodeficiency virus</article-title>. <source>Pediatr Infect Dis J</source> (<year>1996</year>) <volume>15</volume>(<issue>12</issue>):<fpage>1087</fpage>&#x02013;<lpage>91</lpage>.<pub-id pub-id-type="doi">10.1097/00006454-199612000-00006</pub-id><pub-id pub-id-type="pmid">8970217</pub-id></citation></ref>
<ref id="B31"><label>31</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rustagi</surname> <given-names>A</given-names></name> <name><surname>Gale</surname> <given-names>M</given-names> <suffix>Jr</suffix></name></person-group>. <article-title>Innate antiviral immune signaling, viral evasion and modulation by HIV-1</article-title>. <source>J Mol Biol</source> (<year>2014</year>) <volume>426</volume>(<issue>6</issue>):<fpage>1161</fpage>&#x02013;<lpage>77</lpage>.<pub-id pub-id-type="doi">10.1016/j.jmb.2013.12.003</pub-id><pub-id pub-id-type="pmid">24326250</pub-id></citation></ref>
<ref id="B32"><label>32</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Stetson</surname> <given-names>DB</given-names></name> <name><surname>Medzhitov</surname> <given-names>R</given-names></name></person-group>. <article-title>Type I interferons in host defense</article-title>. <source>Immunity</source> (<year>2006</year>) <volume>25</volume>(<issue>3</issue>):<fpage>373</fpage>&#x02013;<lpage>81</lpage>.<pub-id pub-id-type="doi">10.1016/j.immuni.2006.08.007</pub-id></citation></ref>
<ref id="B33"><label>33</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>SY</given-names></name> <name><surname>Jouanguy</surname> <given-names>E</given-names></name> <name><surname>Ugolini</surname> <given-names>S</given-names></name> <name><surname>Smahi</surname> <given-names>A</given-names></name> <name><surname>Elain</surname> <given-names>G</given-names></name> <name><surname>Romero</surname> <given-names>P</given-names></name> <etal/></person-group> <article-title>TLR3 deficiency in patients with herpes simplex encephalitis</article-title>. <source>Science</source> (<year>2007</year>) <volume>317</volume>(<issue>5844</issue>):<fpage>1522</fpage>&#x02013;<lpage>7</lpage>.<pub-id pub-id-type="doi">10.1126/science.1139522</pub-id><pub-id pub-id-type="pmid">17872438</pub-id></citation></ref>
<ref id="B34"><label>34</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ricci</surname> <given-names>E</given-names></name> <name><surname>Malacrida</surname> <given-names>S</given-names></name> <name><surname>Zanchetta</surname> <given-names>M</given-names></name> <name><surname>Mosconi</surname> <given-names>I</given-names></name> <name><surname>Montagna</surname> <given-names>M</given-names></name> <name><surname>Giaquinto</surname> <given-names>C</given-names></name> <etal/></person-group> <article-title>Toll-like receptor 9 polymorphisms influence mother-to-child transmission of human immunodeficiency virus type 1</article-title>. <source>J Transl Med</source> (<year>2010</year>) <volume>8</volume>:<fpage>49</fpage>.<pub-id pub-id-type="doi">10.1186/1479-5876-8-49</pub-id><pub-id pub-id-type="pmid">20500814</pub-id></citation></ref>
<ref id="B35"><label>35</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Qin</surname> <given-names>M</given-names></name> <name><surname>Brummel</surname> <given-names>S</given-names></name> <name><surname>Singh</surname> <given-names>KK</given-names></name> <name><surname>Fenton</surname> <given-names>T</given-names></name> <name><surname>Spector</surname> <given-names>SA</given-names></name></person-group>. <article-title>Associations of host genetic variants on CD4&#x0002B; lymphocyte count and plasma HIV-1 RNA in antiretroviral naive children</article-title>. <source>Pediatr Infect Dis J</source> (<year>2014</year>).<pub-id pub-id-type="doi">10.1097/INF.0000000000000330</pub-id><pub-id pub-id-type="pmid">24797997</pub-id></citation></ref>
<ref id="B36"><label>36</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bunupuradah</surname> <given-names>T</given-names></name> <name><surname>Imahashi</surname> <given-names>M</given-names></name> <name><surname>Iampornsin</surname> <given-names>T</given-names></name> <name><surname>Matsuoka</surname> <given-names>K</given-names></name> <name><surname>Iwatani</surname> <given-names>Y</given-names></name> <name><surname>Puthanakit</surname> <given-names>T</given-names></name> <etal/></person-group> <article-title>Association of APOBEC3G genotypes and CD4 decline in Thai and Cambodian HIV-infected children with moderate immune deficiency</article-title>. <source>AIDS Res Ther</source> (<year>2012</year>) <volume>9</volume>(<issue>1</issue>):<fpage>34</fpage>.<pub-id pub-id-type="doi">10.1186/1742-6405-9-34</pub-id><pub-id pub-id-type="pmid">23181827</pub-id></citation></ref>
<ref id="B37"><label>37</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Singh</surname> <given-names>KK</given-names></name> <name><surname>Wang</surname> <given-names>Y</given-names></name> <name><surname>Gray</surname> <given-names>KP</given-names></name> <name><surname>Farhad</surname> <given-names>M</given-names></name> <name><surname>Brummel</surname> <given-names>S</given-names></name> <name><surname>Fenton</surname> <given-names>T</given-names></name> <etal/></person-group> <article-title>Genetic variants in the host restriction factor APOBEC3G are associated with HIV-1-related disease progression and central nervous system impairment in children</article-title>. <source>J Acquir Immune Defic Syndr</source> (<year>2013</year>) <volume>62</volume>(<issue>2</issue>):<fpage>197</fpage>&#x02013;<lpage>203</lpage>.<pub-id pub-id-type="doi">10.1097/QAI.0b013e31827ab612</pub-id><pub-id pub-id-type="pmid">23138837</pub-id></citation></ref>
<ref id="B38"><label>38</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kollmann</surname> <given-names>TR</given-names></name> <name><surname>Crabtree</surname> <given-names>J</given-names></name> <name><surname>Rein-Weston</surname> <given-names>A</given-names></name> <name><surname>Blimkie</surname> <given-names>D</given-names></name> <name><surname>Thommai</surname> <given-names>F</given-names></name> <name><surname>Wang</surname> <given-names>XY</given-names></name> <etal/></person-group> <article-title>Neonatal innate TLR-mediated responses are distinct from those of adults</article-title>. <source>J Immunol</source> (<year>2009</year>) <volume>183</volume>(<issue>11</issue>):<fpage>7150</fpage>&#x02013;<lpage>60</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.0901481</pub-id></citation></ref>
<ref id="B39"><label>39</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Belderbos</surname> <given-names>ME</given-names></name> <name><surname>van Bleek</surname> <given-names>GM</given-names></name> <name><surname>Levy</surname> <given-names>O</given-names></name> <name><surname>Blanken</surname> <given-names>MO</given-names></name> <name><surname>Houben</surname> <given-names>ML</given-names></name> <name><surname>Schuijff</surname> <given-names>L</given-names></name> <etal/></person-group> <article-title>Skewed pattern of Toll-like receptor 4-mediated cytokine production in human neonatal blood: low LPS-induced IL-12p70 and high IL-10 persist throughout the first month of life</article-title>. <source>Clin Immunol</source> (<year>2009</year>) <volume>133</volume>(<issue>2</issue>):<fpage>228</fpage>&#x02013;<lpage>37</lpage>.<pub-id pub-id-type="doi">10.1016/j.clim.2009.07.003</pub-id><pub-id pub-id-type="pmid">19648060</pub-id></citation></ref>
<ref id="B40"><label>40</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Levy</surname> <given-names>O</given-names></name></person-group>. <article-title>Innate immunity of the newborn: basic mechanisms and clinical correlates</article-title>. <source>Nat Rev Immunol</source> (<year>2007</year>) <volume>7</volume>(<issue>5</issue>):<fpage>379</fpage>&#x02013;<lpage>90</lpage>.<pub-id pub-id-type="doi">10.1038/nri2075</pub-id><pub-id pub-id-type="pmid">17457344</pub-id></citation></ref>
<ref id="B41"><label>41</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Reikie</surname> <given-names>BA</given-names></name> <name><surname>Adams</surname> <given-names>RC</given-names></name> <name><surname>Leligdowicz</surname> <given-names>A</given-names></name> <name><surname>Ho</surname> <given-names>K</given-names></name> <name><surname>Naidoo</surname> <given-names>S</given-names></name> <name><surname>Ruck</surname> <given-names>CE</given-names></name> <etal/></person-group> <article-title>Altered innate immune development in HIV-exposed uninfected infants</article-title>. <source>J Acquir Immune Defic Syndr</source> (<year>2014</year>) <volume>66</volume>(<issue>3</issue>):<fpage>245</fpage>&#x02013;<lpage>55</lpage>.<pub-id pub-id-type="doi">10.1097/QAI.0000000000000161</pub-id><pub-id pub-id-type="pmid">24732876</pub-id></citation></ref>
<ref id="B42"><label>42</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Miller</surname> <given-names>E</given-names></name> <name><surname>Bhardwaj</surname> <given-names>N</given-names></name></person-group>. <article-title>Dendritic cell dysregulation during HIV-1 infection</article-title>. <source>Immunol Rev</source> (<year>2013</year>) <volume>254</volume>(<issue>1</issue>):<fpage>170</fpage>&#x02013;<lpage>89</lpage>.<pub-id pub-id-type="doi">10.1111/imr.12082</pub-id><pub-id pub-id-type="pmid">23772620</pub-id></citation></ref>
<ref id="B43"><label>43</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Selvaraj</surname> <given-names>A</given-names></name> <name><surname>Pilakka-Kanthikeel</surname> <given-names>S</given-names></name> <name><surname>Bhavani</surname> <given-names>PK</given-names></name> <name><surname>Hanna</surname> <given-names>LE</given-names></name> <name><surname>Pahwa</surname> <given-names>S</given-names></name> <name><surname>Swaminathan</surname> <given-names>S</given-names></name></person-group>. <article-title>Defective dendritic cell response to Toll-like receptor 7/8 agonists in perinatally HIV-infected children</article-title>. <source>Pathogens Dis</source> (<year>2013</year>) <volume>69</volume>(<issue>3</issue>):<fpage>184</fpage>&#x02013;<lpage>93</lpage>.<pub-id pub-id-type="doi">10.1111/2049-632X.12067</pub-id><pub-id pub-id-type="pmid">23873734</pub-id></citation></ref>
<ref id="B44"><label>44</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Usuga</surname> <given-names>X</given-names></name> <name><surname>Montoya</surname> <given-names>CJ</given-names></name> <name><surname>Landay</surname> <given-names>AL</given-names></name> <name><surname>Rugeles</surname> <given-names>MT</given-names></name></person-group>. <article-title>Characterization of quantitative and functional innate immune parameters in HIV-1-infected Colombian children receiving stable highly active antiretroviral therapy</article-title>. <source>J Acquir Immune Defic Syndr</source> (<year>2008</year>) <volume>49</volume>(<issue>4</issue>):<fpage>348</fpage>&#x02013;<lpage>57</lpage>.<pub-id pub-id-type="doi">10.1097/QAI.0b013e31818c16ff</pub-id><pub-id pub-id-type="pmid">19186348</pub-id></citation></ref>
<ref id="B45"><label>45</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Azzoni</surname> <given-names>L</given-names></name> <name><surname>Rutstein</surname> <given-names>RM</given-names></name> <name><surname>Chehimi</surname> <given-names>J</given-names></name> <name><surname>Farabaugh</surname> <given-names>MA</given-names></name> <name><surname>Nowmos</surname> <given-names>A</given-names></name> <name><surname>Montaner</surname> <given-names>LJ</given-names></name></person-group>. <article-title>Dendritic and natural killer cell subsets associated with stable or declining CD4&#x0002B; cell counts in treated HIV-1-infected children</article-title>. <source>J Infect Dis</source> (<year>2005</year>) <volume>191</volume>(<issue>9</issue>):<fpage>1451</fpage>&#x02013;<lpage>9</lpage>.<pub-id pub-id-type="doi">10.1086/429300</pub-id><pub-id pub-id-type="pmid">15809903</pub-id></citation></ref>
<ref id="B46"><label>46</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Jost</surname> <given-names>S</given-names></name> <name><surname>Altfeld</surname> <given-names>M</given-names></name></person-group>. <article-title>Control of human viral infections by natural killer cells</article-title>. <source>Annu Rev Immunol</source> (<year>2013</year>) <volume>31</volume>:<fpage>163</fpage>&#x02013;<lpage>94</lpage>.<pub-id pub-id-type="doi">10.1146/annurev-immunol-032712-100001</pub-id><pub-id pub-id-type="pmid">23298212</pub-id></citation></ref>
<ref id="B47"><label>47</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Vilches</surname> <given-names>C</given-names></name> <name><surname>Parham</surname> <given-names>P</given-names></name></person-group>. <article-title>KIR: diverse, rapidly evolving receptors of innate and adaptive immunity</article-title>. <source>Annu Rev Immunol</source> (<year>2002</year>) <volume>20</volume>:<fpage>217</fpage>&#x02013;<lpage>51</lpage>.<pub-id pub-id-type="doi">10.1146/annurev.immunol.20.092501.134942</pub-id><pub-id pub-id-type="pmid">11861603</pub-id></citation></ref>
<ref id="B48"><label>48</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Nakazawa</surname> <given-names>T</given-names></name> <name><surname>Agematsu</surname> <given-names>K</given-names></name> <name><surname>Yabuhara</surname> <given-names>A</given-names></name></person-group>. <article-title>Later development of Fas ligand-mediated cytotoxicity as compared with granule-mediated cytotoxicity during the maturation of natural killer cells</article-title>. <source>Immunology</source> (<year>1997</year>) <volume>92</volume>(<issue>2</issue>):<fpage>180</fpage>&#x02013;<lpage>7</lpage>.<pub-id pub-id-type="doi">10.1046/j.1365-2567.1997.00343.x</pub-id><pub-id pub-id-type="pmid">9415024</pub-id></citation></ref>
<ref id="B49"><label>49</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sundstrom</surname> <given-names>Y</given-names></name> <name><surname>Nilsson</surname> <given-names>C</given-names></name> <name><surname>Lilja</surname> <given-names>G</given-names></name> <name><surname>Karre</surname> <given-names>K</given-names></name> <name><surname>Troye-Blomberg</surname> <given-names>M</given-names></name> <name><surname>Berg</surname> <given-names>L</given-names></name></person-group>. <article-title>The expression of human natural killer cell receptors in early life</article-title>. <source>Scand J Immunol</source> (<year>2007</year>) <volume>66</volume>(<issue>2&#x02013;3</issue>):<fpage>335</fpage>&#x02013;<lpage>44</lpage>.<pub-id pub-id-type="doi">10.1111/j.1365-3083.2007.01980.x</pub-id><pub-id pub-id-type="pmid">17635811</pub-id></citation></ref>
<ref id="B50"><label>50</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yabuhara</surname> <given-names>A</given-names></name> <name><surname>Kawai</surname> <given-names>H</given-names></name> <name><surname>Komiyama</surname> <given-names>A</given-names></name></person-group>. <article-title>Development of natural killer cytotoxicity during childhood: marked increases in number of natural killer cells with adequate cytotoxic abilities during infancy to early childhood</article-title>. <source>Pediatr Res</source> (<year>1990</year>) <volume>28</volume>(<issue>4</issue>):<fpage>316</fpage>&#x02013;<lpage>22</lpage>.<pub-id pub-id-type="doi">10.1203/00006450-199010000-00002</pub-id><pub-id pub-id-type="pmid">1700360</pub-id></citation></ref>
<ref id="B51"><label>51</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Dalle</surname> <given-names>JH</given-names></name> <name><surname>Menezes</surname> <given-names>J</given-names></name> <name><surname>Wagner</surname> <given-names>E</given-names></name> <name><surname>Blagdon</surname> <given-names>M</given-names></name> <name><surname>Champagne</surname> <given-names>J</given-names></name> <name><surname>Champagne</surname> <given-names>MA</given-names></name> <etal/></person-group> <article-title>Characterization of cord blood natural killer cells: implications for transplantation and neonatal infections</article-title>. <source>Pediatr Res</source> (<year>2005</year>) <volume>57</volume>(<issue>5 Pt 1</issue>):<fpage>649</fpage>&#x02013;<lpage>55</lpage>.<pub-id pub-id-type="doi">10.1203/01.PDR.0000156501.55431.20</pub-id><pub-id pub-id-type="pmid">15718362</pub-id></citation></ref>
<ref id="B52"><label>52</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Guilmot</surname> <given-names>A</given-names></name> <name><surname>Hermann</surname> <given-names>E</given-names></name> <name><surname>Braud</surname> <given-names>VM</given-names></name> <name><surname>Carlier</surname> <given-names>Y</given-names></name> <name><surname>Truyens</surname> <given-names>C</given-names></name></person-group>. <article-title>Natural killer cell responses to infections in early life</article-title>. <source>J Innate Immun</source> (<year>2011</year>) <volume>3</volume>(<issue>3</issue>):<fpage>280</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1159/000323934</pub-id><pub-id pub-id-type="pmid">21411972</pub-id></citation></ref>
<ref id="B53"><label>53</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ballan</surname> <given-names>WM</given-names></name> <name><surname>Vu</surname> <given-names>BA</given-names></name> <name><surname>Long</surname> <given-names>BR</given-names></name> <name><surname>Loo</surname> <given-names>CP</given-names></name> <name><surname>Michaelsson</surname> <given-names>J</given-names></name> <name><surname>Barbour</surname> <given-names>JD</given-names></name> <etal/></person-group> <article-title>Natural killer cells in perinatally HIV-1-infected children exhibit less degranulation compared to HIV-1-exposed uninfected children and their expression of KIR2DL3, NKG2C, and NKp46 correlates with disease severity</article-title>. <source>J Immunol</source> (<year>2007</year>) <volume>179</volume>(<issue>5</issue>):<fpage>3362</fpage>&#x02013;<lpage>70</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.179.5.3362</pub-id><pub-id pub-id-type="pmid">17709553</pub-id></citation></ref>
<ref id="B54"><label>54</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ziegner</surname> <given-names>U</given-names></name> <name><surname>Campbell</surname> <given-names>D</given-names></name> <name><surname>Weinhold</surname> <given-names>K</given-names></name> <name><surname>Frank</surname> <given-names>I</given-names></name> <name><surname>Rutstein</surname> <given-names>R</given-names></name> <name><surname>Starr</surname> <given-names>SE</given-names></name></person-group>. <article-title>Deficient antibody-dependent cellular cytotoxicity against human immunodeficiency virus (HIV)-expressing target cells in perinatal HIV infection</article-title>. <source>Clin Diagn Lab Immunol</source> (<year>1999</year>) <volume>6</volume>(<issue>5</issue>):<fpage>718</fpage>&#x02013;<lpage>24</lpage>.<pub-id pub-id-type="pmid">10473524</pub-id></citation></ref>
<ref id="B55"><label>55</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bernstein</surname> <given-names>HB</given-names></name> <name><surname>Kinter</surname> <given-names>AL</given-names></name> <name><surname>Jackson</surname> <given-names>R</given-names></name> <name><surname>Fauci</surname> <given-names>AS</given-names></name></person-group>. <article-title>Neonatal natural killer cells produce chemokines and suppress HIV replication in vitro</article-title>. <source>AIDS Res Hum Retroviruses</source> (<year>2004</year>) <volume>20</volume>(<issue>11</issue>):<fpage>1189</fpage>&#x02013;<lpage>95</lpage>.<pub-id pub-id-type="doi">10.1089/0889222042544983</pub-id><pub-id pub-id-type="pmid">15588341</pub-id></citation></ref>
<ref id="B56"><label>56</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Slyker</surname> <given-names>JA</given-names></name> <name><surname>Lohman-Payne</surname> <given-names>B</given-names></name> <name><surname>John-Stewart</surname> <given-names>GC</given-names></name> <name><surname>Dong</surname> <given-names>T</given-names></name> <name><surname>Mbori-Ngacha</surname> <given-names>D</given-names></name> <name><surname>Tapia</surname> <given-names>K</given-names></name> <etal/></person-group> <article-title>The impact of HIV-1 infection and exposure on natural killer (NK) cell phenotype in Kenyan infants during the first year of life</article-title>. <source>Front Immunol</source> (<year>2012</year>) <volume>3</volume>:<fpage>399</fpage>.<pub-id pub-id-type="doi">10.3389/fimmu.2012.00399</pub-id><pub-id pub-id-type="pmid">23293640</pub-id></citation></ref>
<ref id="B57"><label>57</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wegmann</surname> <given-names>TG</given-names></name> <name><surname>Lin</surname> <given-names>H</given-names></name> <name><surname>Guilbert</surname> <given-names>L</given-names></name> <name><surname>Mosmann</surname> <given-names>TR</given-names></name></person-group>. <article-title>Bidirectional cytokine interactions in the maternal-fetal relationship: is successful pregnancy a TH2 phenomenon?</article-title> <source>Immunol Today</source> (<year>1993</year>) <volume>14</volume>(<issue>7</issue>):<fpage>353</fpage>&#x02013;<lpage>6</lpage>.<pub-id pub-id-type="doi">10.1016/0167-5699(93)90235-D</pub-id><pub-id pub-id-type="pmid">8363725</pub-id></citation></ref>
<ref id="B58"><label>58</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pazos</surname> <given-names>M</given-names></name> <name><surname>Sperling</surname> <given-names>RS</given-names></name> <name><surname>Moran</surname> <given-names>TM</given-names></name> <name><surname>Kraus</surname> <given-names>TA</given-names></name></person-group>. <article-title>The influence of pregnancy on systemic immunity</article-title>. <source>Immunol Res</source> (<year>2012</year>) <volume>54</volume>(<issue>1&#x02013;3</issue>):<fpage>254</fpage>&#x02013;<lpage>61</lpage>.<pub-id pub-id-type="doi">10.1007/s12026-012-8303-9</pub-id><pub-id pub-id-type="pmid">22447351</pub-id></citation></ref>
<ref id="B59"><label>59</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kourtis</surname> <given-names>AP</given-names></name> <name><surname>Read</surname> <given-names>JS</given-names></name> <name><surname>Jamieson</surname> <given-names>DJ</given-names></name></person-group>. <article-title>Pregnancy and infection</article-title>. <source>N Engl J Med</source> (<year>2014</year>) <volume>370</volume>(<issue>23</issue>):<fpage>2211</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1056/NEJMra1213566</pub-id></citation></ref>
<ref id="B60"><label>60</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sperling</surname> <given-names>RS</given-names></name> <name><surname>Engel</surname> <given-names>SM</given-names></name> <name><surname>Wallenstein</surname> <given-names>S</given-names></name> <name><surname>Kraus</surname> <given-names>TA</given-names></name> <name><surname>Garrido</surname> <given-names>J</given-names></name> <name><surname>Singh</surname> <given-names>T</given-names></name> <etal/></person-group> <article-title>Immunogenicity of trivalent inactivated influenza vaccination received during pregnancy or postpartum</article-title>. <source>Obstet Gynecol</source> (<year>2012</year>) <volume>119</volume>(<issue>3</issue>):<fpage>631</fpage>&#x02013;<lpage>9</lpage>.<pub-id pub-id-type="doi">10.1097/AOG.0b013e318244ed20</pub-id><pub-id pub-id-type="pmid">22353963</pub-id></citation></ref>
<ref id="B61"><label>61</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ohfuji</surname> <given-names>S</given-names></name> <name><surname>Fukushima</surname> <given-names>W</given-names></name> <name><surname>Deguchi</surname> <given-names>M</given-names></name> <name><surname>Kawabata</surname> <given-names>K</given-names></name> <name><surname>Yoshida</surname> <given-names>H</given-names></name> <name><surname>Hatayama</surname> <given-names>H</given-names></name> <etal/></person-group> <article-title>Immunogenicity of a monovalent 2009 influenza A (H1N1) vaccine among pregnant women: lowered antibody response by prior seasonal vaccination</article-title>. <source>J Infect Dis</source> (<year>2011</year>) <volume>203</volume>(<issue>9</issue>):<fpage>1301</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1093/infdis/jir026</pub-id><pub-id pub-id-type="pmid">21459817</pub-id></citation></ref>
<ref id="B62"><label>62</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Healy</surname> <given-names>CM</given-names></name></person-group>. <article-title>Vaccines in pregnant women and research initiatives</article-title>. <source>Clin Obstet Gynecol</source> (<year>2012</year>) <volume>55</volume>(<issue>2</issue>):<fpage>474</fpage>&#x02013;<lpage>86</lpage>.<pub-id pub-id-type="doi">10.1097/GRF.0b013e31824f3acb</pub-id></citation></ref>
<ref id="B63"><label>63</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lissauer</surname> <given-names>D</given-names></name> <name><surname>Piper</surname> <given-names>K</given-names></name> <name><surname>Goodyear</surname> <given-names>O</given-names></name> <name><surname>Kilby</surname> <given-names>MD</given-names></name> <name><surname>Moss</surname> <given-names>PA</given-names></name></person-group>. <article-title>Fetal-specific CD8&#x0002B; cytotoxic T cell responses develop during normal human pregnancy and exhibit broad functional capacity</article-title>. <source>J Immunol</source> (<year>2012</year>) <volume>189</volume>(<issue>2</issue>):<fpage>1072</fpage>&#x02013;<lpage>80</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.1200544</pub-id><pub-id pub-id-type="pmid">22685312</pub-id></citation></ref>
<ref id="B64"><label>64</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mold</surname> <given-names>JE</given-names></name> <name><surname>McCune</surname> <given-names>JM</given-names></name></person-group>. <article-title>At the crossroads between tolerance and aggression: revisiting the &#x0201C;layered immune system&#x0201D; hypothesis</article-title>. <source>Chimerism</source> (<year>2011</year>) <volume>2</volume>(<issue>2</issue>):<fpage>35</fpage>&#x02013;<lpage>41</lpage>.<pub-id pub-id-type="doi">10.4161/chim.2.2.16329</pub-id><pub-id pub-id-type="pmid">21912717</pub-id></citation></ref>
<ref id="B65"><label>65</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Michaelsson</surname> <given-names>J</given-names></name> <name><surname>Mold</surname> <given-names>JE</given-names></name> <name><surname>McCune</surname> <given-names>JM</given-names></name> <name><surname>Nixon</surname> <given-names>DF</given-names></name></person-group>. <article-title>Regulation of T cell responses in the developing human fetus</article-title>. <source>J Immunol</source> (<year>2006</year>) <volume>176</volume>(<issue>10</issue>):<fpage>5741</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.176.10.5741</pub-id><pub-id pub-id-type="pmid">16670279</pub-id></citation></ref>
<ref id="B66"><label>66</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mold</surname> <given-names>JE</given-names></name> <name><surname>Michaelsson</surname> <given-names>J</given-names></name> <name><surname>Burt</surname> <given-names>TD</given-names></name> <name><surname>Muench</surname> <given-names>MO</given-names></name> <name><surname>Beckerman</surname> <given-names>KP</given-names></name> <name><surname>Busch</surname> <given-names>MP</given-names></name> <etal/></person-group> <article-title>Maternal alloantigens promote the development of tolerogenic fetal regulatory T cells in utero</article-title>. <source>Science</source> (<year>2008</year>) <volume>322</volume>(<issue>5907</issue>):<fpage>1562</fpage>&#x02013;<lpage>5</lpage>.<pub-id pub-id-type="doi">10.1126/science.1164511</pub-id><pub-id pub-id-type="pmid">19056990</pub-id></citation></ref>
<ref id="B67"><label>67</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Takahata</surname> <given-names>Y</given-names></name> <name><surname>Nomura</surname> <given-names>A</given-names></name> <name><surname>Takada</surname> <given-names>H</given-names></name> <name><surname>Ohga</surname> <given-names>S</given-names></name> <name><surname>Furuno</surname> <given-names>K</given-names></name> <name><surname>Hikino</surname> <given-names>S</given-names></name> <etal/></person-group> <article-title>CD25&#x0002B;CD4&#x0002B; T cells in human cord blood: an immunoregulatory subset with naive phenotype and specific expression of forkhead box p3 (Foxp3) gene</article-title>. <source>Exp Hematol</source> (<year>2004</year>) <volume>32</volume>(<issue>7</issue>):<fpage>622</fpage>&#x02013;<lpage>9</lpage>.<pub-id pub-id-type="doi">10.1016/j.exphem.2004.03.012</pub-id><pub-id pub-id-type="pmid">15246158</pub-id></citation></ref>
<ref id="B68"><label>68</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mold</surname> <given-names>JE</given-names></name> <name><surname>Venkatasubrahmanyam</surname> <given-names>S</given-names></name> <name><surname>Burt</surname> <given-names>TD</given-names></name> <name><surname>Michaelsson</surname> <given-names>J</given-names></name> <name><surname>Rivera</surname> <given-names>JM</given-names></name> <name><surname>Galkina</surname> <given-names>SA</given-names></name> <etal/></person-group> <article-title>Fetal and adult hematopoietic stem cells give rise to distinct T cell lineages in humans</article-title>. <source>Science</source> (<year>2010</year>) <volume>330</volume>(<issue>6011</issue>):<fpage>1695</fpage>&#x02013;<lpage>9</lpage>.<pub-id pub-id-type="doi">10.1126/science.1196509</pub-id><pub-id pub-id-type="pmid">21164017</pub-id></citation></ref>
<ref id="B69"><label>69</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Simonetta</surname> <given-names>F</given-names></name> <name><surname>Bourgeois</surname> <given-names>C</given-names></name></person-group>. <article-title>CD4&#x0002B;FOXP3&#x0002B; regulatory T-cell subsets in human immunodeficiency virus infection</article-title>. <source>Front Immunol</source> (<year>2013</year>) <volume>4</volume>:<fpage>215</fpage>.<pub-id pub-id-type="doi">10.3389/fimmu.2013.00215</pub-id><pub-id pub-id-type="pmid">23908654</pub-id></citation></ref>
<ref id="B70"><label>70</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chevalier</surname> <given-names>MF</given-names></name> <name><surname>Weiss</surname> <given-names>L</given-names></name></person-group>. <article-title>The split personality of regulatory T cells in HIV infection</article-title>. <source>Blood</source> (<year>2013</year>) <volume>121</volume>(<issue>1</issue>):<fpage>29</fpage>&#x02013;<lpage>37</lpage>.<pub-id pub-id-type="doi">10.1182/blood-2012-07-409755</pub-id><pub-id pub-id-type="pmid">23043072</pub-id></citation></ref>
<ref id="B71"><label>71</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Freguja</surname> <given-names>R</given-names></name> <name><surname>Gianesin</surname> <given-names>K</given-names></name> <name><surname>Mosconi</surname> <given-names>I</given-names></name> <name><surname>Zanchetta</surname> <given-names>M</given-names></name> <name><surname>Carmona</surname> <given-names>F</given-names></name> <name><surname>Rampon</surname> <given-names>O</given-names></name> <etal/></person-group> <article-title>Regulatory T cells and chronic immune activation in human immunodeficiency virus 1 (HIV-1)-infected children</article-title>. <source>Clin Exp Immunol</source> (<year>2011</year>) <volume>164</volume>(<issue>3</issue>):<fpage>373</fpage>&#x02013;<lpage>80</lpage>.<pub-id pub-id-type="doi">10.1111/j.1365-2249.2011.04383.x</pub-id><pub-id pub-id-type="pmid">21438872</pub-id></citation></ref>
<ref id="B72"><label>72</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Prendergast</surname> <given-names>A</given-names></name> <name><surname>O&#x02019;Callaghan</surname> <given-names>M</given-names></name> <name><surname>Menson</surname> <given-names>E</given-names></name> <name><surname>Hamadache</surname> <given-names>D</given-names></name> <name><surname>Walters</surname> <given-names>S</given-names></name> <name><surname>Klein</surname> <given-names>N</given-names></name> <etal/></person-group> <article-title>Factors influencing T cell activation and programmed death 1 expression in HIV-infected children</article-title>. <source>AIDS Res Hum Retroviruses</source> (<year>2012</year>) <volume>28</volume>(<issue>5</issue>):<fpage>465</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1089/AID.2011.0113</pub-id><pub-id pub-id-type="pmid">21834749</pub-id></citation></ref>
<ref id="B73"><label>73</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Arguello</surname> <given-names>RJ</given-names></name> <name><surname>Balbaryski</surname> <given-names>J</given-names></name> <name><surname>Barboni</surname> <given-names>G</given-names></name> <name><surname>Candi</surname> <given-names>M</given-names></name> <name><surname>Gaddi</surname> <given-names>E</given-names></name> <name><surname>Laucella</surname> <given-names>S</given-names></name></person-group>. <article-title>Altered frequency and phenotype of CD4&#x0002B; forkhead box protein 3&#x0002B; T cells and its association with autoantibody production in human immunodeficiency virus-infected paediatric patients</article-title>. <source>Clin Exp Immunol</source> (<year>2012</year>) <volume>168</volume>(<issue>2</issue>):<fpage>224</fpage>&#x02013;<lpage>33</lpage>.<pub-id pub-id-type="doi">10.1111/j.1365-2249.2012.04569.x</pub-id><pub-id pub-id-type="pmid">22471284</pub-id></citation></ref>
<ref id="B74"><label>74</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Legrand</surname> <given-names>FA</given-names></name> <name><surname>Nixon</surname> <given-names>DF</given-names></name> <name><surname>Loo</surname> <given-names>CP</given-names></name> <name><surname>Ono</surname> <given-names>E</given-names></name> <name><surname>Chapman</surname> <given-names>JM</given-names></name> <name><surname>Miyamoto</surname> <given-names>M</given-names></name> <etal/></person-group> <article-title>Strong HIV-1-specific T cell responses in HIV-1-exposed uninfected infants and neonates revealed after regulatory T cell removal</article-title>. <source>PLoS One</source> (<year>2006</year>) <volume>1</volume>:<fpage>e102</fpage>.<pub-id pub-id-type="doi">10.1371/journal.pone.0000102</pub-id><pub-id pub-id-type="pmid">17183635</pub-id></citation></ref>
<ref id="B75"><label>75</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Borrow</surname> <given-names>P</given-names></name> <name><surname>Lewicki</surname> <given-names>H</given-names></name> <name><surname>Hahn</surname> <given-names>BH</given-names></name> <name><surname>Shaw</surname> <given-names>GM</given-names></name> <name><surname>Oldstone</surname> <given-names>MB</given-names></name></person-group>. <article-title>Virus-specific CD8&#x0002B; cytotoxic T-lymphocyte activity associated with control of viremia in primary human immunodeficiency virus type 1 infection</article-title>. <source>J Virol</source> (<year>1994</year>) <volume>68</volume>(<issue>9</issue>):<fpage>6103</fpage>&#x02013;<lpage>10</lpage>.<pub-id pub-id-type="pmid">8057491</pub-id></citation></ref>
<ref id="B76"><label>76</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Koup</surname> <given-names>RA</given-names></name> <name><surname>Safrit</surname> <given-names>JT</given-names></name> <name><surname>Cao</surname> <given-names>Y</given-names></name> <name><surname>Andrews</surname> <given-names>CA</given-names></name> <name><surname>McLeod</surname> <given-names>G</given-names></name> <name><surname>Borkowsky</surname> <given-names>W</given-names></name> <etal/></person-group> <article-title>Temporal association of cellular immune responses with the initial control of viremia in primary human immunodeficiency virus type 1 syndrome</article-title>. <source>J Virol</source> (<year>1994</year>) <volume>68</volume>(<issue>7</issue>):<fpage>4650</fpage>&#x02013;<lpage>5</lpage>.</citation></ref>
<ref id="B77"><label>77</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Friedrich</surname> <given-names>TC</given-names></name> <name><surname>Valentine</surname> <given-names>LE</given-names></name> <name><surname>Yant</surname> <given-names>LJ</given-names></name> <name><surname>Rakasz</surname> <given-names>EG</given-names></name> <name><surname>Piaskowski</surname> <given-names>SM</given-names></name> <name><surname>Furlott</surname> <given-names>JR</given-names></name> <etal/></person-group> <article-title>Subdominant CD8&#x0002B; T-cell responses are involved in durable control of AIDS virus replication</article-title>. <source>J Virol</source> (<year>2007</year>) <volume>81</volume>(<issue>7</issue>):<fpage>3465</fpage>&#x02013;<lpage>76</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.02392-06</pub-id><pub-id pub-id-type="pmid">17251286</pub-id></citation></ref>
<ref id="B78"><label>78</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Schmitz</surname> <given-names>JE</given-names></name> <name><surname>Kuroda</surname> <given-names>MJ</given-names></name> <name><surname>Santra</surname> <given-names>S</given-names></name> <name><surname>Sasseville</surname> <given-names>VG</given-names></name> <name><surname>Simon</surname> <given-names>MA</given-names></name> <name><surname>Lifton</surname> <given-names>MA</given-names></name> <etal/></person-group> <article-title>Control of viremia in simian immunodeficiency virus infection by CD8&#x0002B; lymphocytes</article-title>. <source>Science</source> (<year>1999</year>) <volume>283</volume>(<issue>5403</issue>):<fpage>857</fpage>&#x02013;<lpage>60</lpage>.<pub-id pub-id-type="doi">10.1126/science.283.5403.857</pub-id><pub-id pub-id-type="pmid">9933172</pub-id></citation></ref>
<ref id="B79"><label>79</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rodriguez</surname> <given-names>B</given-names></name> <name><surname>Sethi</surname> <given-names>AK</given-names></name> <name><surname>Cheruvu</surname> <given-names>VK</given-names></name> <name><surname>Mackay</surname> <given-names>W</given-names></name> <name><surname>Bosch</surname> <given-names>RJ</given-names></name> <name><surname>Kitahata</surname> <given-names>M</given-names></name> <etal/></person-group> <article-title>Predictive value of plasma HIV RNA level on rate of CD4 T-cell decline in untreated HIV infection</article-title>. <source>JAMA</source> (<year>2006</year>) <volume>296</volume>(<issue>12</issue>):<fpage>1498</fpage>&#x02013;<lpage>506</lpage>.<pub-id pub-id-type="doi">10.1001/jama.296.12.1498</pub-id><pub-id pub-id-type="pmid">17003398</pub-id></citation></ref>
<ref id="B80"><label>80</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Goulder</surname> <given-names>PJ</given-names></name> <name><surname>Walker</surname> <given-names>BD</given-names></name></person-group>. <article-title>HIV and HLA class I: an evolving relationship</article-title>. <source>Immunity</source> (<year>2012</year>) <volume>37</volume>(<issue>3</issue>):<fpage>426</fpage>&#x02013;<lpage>40</lpage>.<pub-id pub-id-type="doi">10.1016/j.immuni.2012.09.005</pub-id><pub-id pub-id-type="pmid">22999948</pub-id></citation></ref>
<ref id="B81"><label>81</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Crawford</surname> <given-names>H</given-names></name> <name><surname>Lumm</surname> <given-names>W</given-names></name> <name><surname>Leslie</surname> <given-names>A</given-names></name> <name><surname>Schaefer</surname> <given-names>M</given-names></name> <name><surname>Boeras</surname> <given-names>D</given-names></name> <name><surname>Prado</surname> <given-names>JG</given-names></name> <etal/></person-group> <article-title>Evolution of HLA-B&#x0002A;5703 HIV-1 escape mutations in HLA-B&#x0002A;5703-positive individuals and their transmission recipients</article-title>. <source>J Exp Med</source> (<year>2009</year>) <volume>206</volume>(<issue>4</issue>):<fpage>909</fpage>&#x02013;<lpage>21</lpage>.<pub-id pub-id-type="doi">10.1084/jem.20081984</pub-id><pub-id pub-id-type="pmid">19307327</pub-id></citation></ref>
<ref id="B82"><label>82</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Schneidewind</surname> <given-names>A</given-names></name> <name><surname>Brockman</surname> <given-names>MA</given-names></name> <name><surname>Yang</surname> <given-names>R</given-names></name> <name><surname>Adam</surname> <given-names>RI</given-names></name> <name><surname>Li</surname> <given-names>B</given-names></name> <name><surname>Le Gall</surname> <given-names>S</given-names></name> <etal/></person-group> <article-title>Escape from the dominant HLA-B27-restricted cytotoxic T-lymphocyte response in Gag is associated with a dramatic reduction in human immunodeficiency virus type 1 replication</article-title>. <source>J Virol</source> (<year>2007</year>) <volume>81</volume>(<issue>22</issue>):<fpage>12382</fpage>&#x02013;<lpage>93</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.01543-07</pub-id><pub-id pub-id-type="pmid">17804494</pub-id></citation></ref>
<ref id="B83"><label>83</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Prince</surname> <given-names>JL</given-names></name> <name><surname>Claiborne</surname> <given-names>DT</given-names></name> <name><surname>Carlson</surname> <given-names>JM</given-names></name> <name><surname>Schaefer</surname> <given-names>M</given-names></name> <name><surname>Yu</surname> <given-names>T</given-names></name> <name><surname>Lahki</surname> <given-names>S</given-names></name> <etal/></person-group> <article-title>Role of transmitted Gag CTL polymorphisms in defining replicative capacity and early HIV-1 pathogenesis</article-title>. <source>PLoS Pathog</source> (<year>2012</year>) <volume>8</volume>(<issue>11</issue>):<fpage>e1003041</fpage>.<pub-id pub-id-type="doi">10.1371/journal.ppat.1003041</pub-id><pub-id pub-id-type="pmid">23209412</pub-id></citation></ref>
<ref id="B84"><label>84</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Goepfert</surname> <given-names>PA</given-names></name> <name><surname>Lumm</surname> <given-names>W</given-names></name> <name><surname>Farmer</surname> <given-names>P</given-names></name> <name><surname>Matthews</surname> <given-names>P</given-names></name> <name><surname>Prendergast</surname> <given-names>A</given-names></name> <name><surname>Carlson</surname> <given-names>JM</given-names></name> <etal/></person-group> <article-title>Transmission of HIV-1 Gag immune escape mutations is associated with reduced viral load in linked recipients</article-title>. <source>J Exp Med</source> (<year>2008</year>) <volume>205</volume>(<issue>5</issue>):<fpage>1009</fpage>&#x02013;<lpage>17</lpage>.<pub-id pub-id-type="doi">10.1084/jem.20072457</pub-id><pub-id pub-id-type="pmid">18426987</pub-id></citation></ref>
<ref id="B85"><label>85</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Thobakgale</surname> <given-names>CF</given-names></name> <name><surname>Prendergast</surname> <given-names>A</given-names></name> <name><surname>Crawford</surname> <given-names>H</given-names></name> <name><surname>Mkhwanazi</surname> <given-names>N</given-names></name> <name><surname>Ramduth</surname> <given-names>D</given-names></name> <name><surname>Reddy</surname> <given-names>S</given-names></name> <etal/></person-group> <article-title>Impact of HLA in mother and child on disease progression of pediatric human immunodeficiency virus type 1 infection</article-title>. <source>J Virol</source> (<year>2009</year>) <volume>83</volume>(<issue>19</issue>):<fpage>10234</fpage>&#x02013;<lpage>44</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.00921-09</pub-id><pub-id pub-id-type="pmid">19605475</pub-id></citation></ref>
<ref id="B86"><label>86</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Goulder</surname> <given-names>PJ</given-names></name> <name><surname>Brander</surname> <given-names>C</given-names></name> <name><surname>Tang</surname> <given-names>Y</given-names></name> <name><surname>Tremblay</surname> <given-names>C</given-names></name> <name><surname>Colbert</surname> <given-names>RA</given-names></name> <name><surname>Addo</surname> <given-names>MM</given-names></name> <etal/></person-group> <article-title>Evolution and transmission of stable CTL escape mutations in HIV infection</article-title>. <source>Nature</source> (<year>2001</year>) <volume>412</volume>(<issue>6844</issue>):<fpage>334</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1038/35085576</pub-id><pub-id pub-id-type="pmid">11460164</pub-id></citation></ref>
<ref id="B87"><label>87</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sharp</surname> <given-names>ER</given-names></name> <name><surname>Willberg</surname> <given-names>CB</given-names></name> <name><surname>Kuebler</surname> <given-names>PJ</given-names></name> <name><surname>Abadi</surname> <given-names>J</given-names></name> <name><surname>Fennelly</surname> <given-names>GJ</given-names></name> <name><surname>Dobroszycki</surname> <given-names>J</given-names></name> <etal/></person-group> <article-title>Immunodominance of HIV-1 specific CD8&#x0002B; T-cell responses is related to disease progression rate in vertically infected adolescents</article-title>. <source>PLoS One</source> (<year>2011</year>) <volume>6</volume>(<issue>7</issue>):<fpage>e21135</fpage>.<pub-id pub-id-type="doi">10.1371/journal.pone.0021135</pub-id><pub-id pub-id-type="pmid">21818255</pub-id></citation></ref>
<ref id="B88"><label>88</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Haynes</surname> <given-names>BF</given-names></name> <name><surname>Heinly</surname> <given-names>CS</given-names></name></person-group>. <article-title>Early human T cell development: analysis of the human thymus at the time of initial entry of hematopoietic stem cells into the fetal thymic microenvironment</article-title>. <source>J Exp Med</source> (<year>1995</year>) <volume>181</volume>(<issue>4</issue>):<fpage>1445</fpage>&#x02013;<lpage>58</lpage>.<pub-id pub-id-type="doi">10.1084/jem.181.4.1445</pub-id><pub-id pub-id-type="pmid">7699329</pub-id></citation></ref>
<ref id="B89"><label>89</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Luzuriaga</surname> <given-names>K</given-names></name> <name><surname>Holmes</surname> <given-names>D</given-names></name> <name><surname>Hereema</surname> <given-names>A</given-names></name> <name><surname>Wong</surname> <given-names>J</given-names></name> <name><surname>Panicali</surname> <given-names>DL</given-names></name> <name><surname>Sullivan</surname> <given-names>JL</given-names></name></person-group>. <article-title>HIV-1-specific cytotoxic T lymphocyte responses in the first year of life</article-title>. <source>J Immunol</source> (<year>1995</year>) <volume>154</volume>(<issue>1</issue>):<fpage>433</fpage>&#x02013;<lpage>43</lpage>.<pub-id pub-id-type="pmid">7995957</pub-id></citation></ref>
<ref id="B90"><label>90</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Thobakgale</surname> <given-names>CF</given-names></name> <name><surname>Ramduth</surname> <given-names>D</given-names></name> <name><surname>Reddy</surname> <given-names>S</given-names></name> <name><surname>Mkhwanazi</surname> <given-names>N</given-names></name> <name><surname>de Pierres</surname> <given-names>C</given-names></name> <name><surname>Moodley</surname> <given-names>E</given-names></name> <etal/></person-group> <article-title>Human immunodeficiency virus-specific CD8&#x0002B; T-cell activity is detectable from birth in the majority of in utero-infected infants</article-title>. <source>J Virol</source> (<year>2007</year>) <volume>81</volume>(<issue>23</issue>):<fpage>12775</fpage>&#x02013;<lpage>84</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.00624-07</pub-id><pub-id pub-id-type="pmid">17881456</pub-id></citation></ref>
<ref id="B91"><label>91</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Scott</surname> <given-names>ZA</given-names></name> <name><surname>Chadwick</surname> <given-names>EG</given-names></name> <name><surname>Gibson</surname> <given-names>LL</given-names></name> <name><surname>Catalina</surname> <given-names>MD</given-names></name> <name><surname>McManus</surname> <given-names>MM</given-names></name> <name><surname>Yogev</surname> <given-names>R</given-names></name> <etal/></person-group> <article-title>Infrequent detection of HIV-1-specific, but not cytomegalovirus-specific, CD8(&#x0002B;) T cell responses in young HIV-1-infected infants</article-title>. <source>J Immunol</source> (<year>2001</year>) <volume>167</volume>(<issue>12</issue>):<fpage>7134</fpage>&#x02013;<lpage>40</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.167.12.7134</pub-id><pub-id pub-id-type="pmid">11739536</pub-id></citation></ref>
<ref id="B92"><label>92</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shalekoff</surname> <given-names>S</given-names></name> <name><surname>Meddows-Taylor</surname> <given-names>S</given-names></name> <name><surname>Gray</surname> <given-names>GE</given-names></name> <name><surname>Sherman</surname> <given-names>GG</given-names></name> <name><surname>Coovadia</surname> <given-names>AH</given-names></name> <name><surname>Kuhn</surname> <given-names>L</given-names></name> <etal/></person-group> <article-title>Identification of human immunodeficiency virus-1 specific CD8&#x0002B; and CD4&#x0002B; T cell responses in perinatally-infected infants and their mothers</article-title>. <source>AIDS</source> (<year>2009</year>) <volume>23</volume>(<issue>7</issue>):<fpage>789</fpage>&#x02013;<lpage>98</lpage>.<pub-id pub-id-type="doi">10.1097/QAD.0b013e328329c784</pub-id><pub-id pub-id-type="pmid">19293686</pub-id></citation></ref>
<ref id="B93"><label>93</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lohman</surname> <given-names>BL</given-names></name> <name><surname>Slyker</surname> <given-names>JA</given-names></name> <name><surname>Richardson</surname> <given-names>BA</given-names></name> <name><surname>Farquhar</surname> <given-names>C</given-names></name> <name><surname>Mabuka</surname> <given-names>JM</given-names></name> <name><surname>Crudder</surname> <given-names>C</given-names></name> <etal/></person-group> <article-title>Longitudinal assessment of human immunodeficiency virus type 1 (HIV-1)-specific gamma interferon responses during the first year of life in HIV-1-infected infants</article-title>. <source>J Virol</source> (<year>2005</year>) <volume>79</volume>(<issue>13</issue>):<fpage>8121</fpage>&#x02013;<lpage>30</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.79.13.8121-8130.2005</pub-id><pub-id pub-id-type="pmid">15956557</pub-id></citation></ref>
<ref id="B94"><label>94</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Nqoko</surname> <given-names>B</given-names></name> <name><surname>Day</surname> <given-names>CL</given-names></name> <name><surname>Mansoor</surname> <given-names>N</given-names></name> <name><surname>De Kock</surname> <given-names>M</given-names></name> <name><surname>Hughes</surname> <given-names>EJ</given-names></name> <name><surname>Hawkridge</surname> <given-names>T</given-names></name> <etal/></person-group> <article-title>HIV-specific gag responses in early infancy correlate with clinical outcome and inversely with viral load</article-title>. <source>AIDS Res Hum Retroviruses</source> (<year>2011</year>) <volume>27</volume>(<issue>12</issue>):<fpage>1311</fpage>&#x02013;<lpage>6</lpage>.<pub-id pub-id-type="doi">10.1089/aid.2011.0081</pub-id><pub-id pub-id-type="pmid">21476948</pub-id></citation></ref>
<ref id="B95"><label>95</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Huang</surname> <given-names>S</given-names></name> <name><surname>Dunkley-Thompson</surname> <given-names>J</given-names></name> <name><surname>Tang</surname> <given-names>Y</given-names></name> <name><surname>Macklin</surname> <given-names>EA</given-names></name> <name><surname>Steel-Duncan</surname> <given-names>J</given-names></name> <name><surname>Singh-Minott</surname> <given-names>I</given-names></name> <etal/></person-group> <article-title>Deficiency of HIV-Gag-specific T cells in early childhood correlates with poor viral containment</article-title>. <source>J Immunol</source> (<year>2008</year>) <volume>181</volume>(<issue>11</issue>):<fpage>8103</fpage>&#x02013;<lpage>11</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.181.11.8103</pub-id><pub-id pub-id-type="pmid">19018003</pub-id></citation></ref>
<ref id="B96"><label>96</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Prendergast</surname> <given-names>A</given-names></name> <name><surname>Goodliffe</surname> <given-names>H</given-names></name> <name><surname>Clapson</surname> <given-names>M</given-names></name> <name><surname>Cross</surname> <given-names>R</given-names></name> <name><surname>Tudor-Williams</surname> <given-names>G</given-names></name> <name><surname>Riddell</surname> <given-names>A</given-names></name> <etal/></person-group> <article-title>Gag-specific CD4&#x0002B; T-cell responses are associated with virological control of paediatric HIV-1 infection</article-title>. <source>AIDS</source> (<year>2011</year>) <volume>25</volume>(<issue>10</issue>):<fpage>1329</fpage>&#x02013;<lpage>31</lpage>.<pub-id pub-id-type="doi">10.1097/QAD.0b013e3283478575</pub-id><pub-id pub-id-type="pmid">21505296</pub-id></citation></ref>
<ref id="B97"><label>97</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kiepiela</surname> <given-names>P</given-names></name> <name><surname>Ngumbela</surname> <given-names>K</given-names></name> <name><surname>Thobakgale</surname> <given-names>C</given-names></name> <name><surname>Ramduth</surname> <given-names>D</given-names></name> <name><surname>Honeyborne</surname> <given-names>I</given-names></name> <name><surname>Moodley</surname> <given-names>E</given-names></name> <etal/></person-group> <article-title>CD8&#x0002B; T-cell responses to different HIV proteins have discordant associations with viral load</article-title>. <source>Nat Med</source> (<year>2007</year>) <volume>13</volume>(<issue>1</issue>):<fpage>46</fpage>&#x02013;<lpage>53</lpage>.<pub-id pub-id-type="doi">10.1038/nm1520</pub-id><pub-id pub-id-type="pmid">17173051</pub-id></citation></ref>
<ref id="B98"><label>98</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Geldmacher</surname> <given-names>C</given-names></name> <name><surname>Currier</surname> <given-names>JR</given-names></name> <name><surname>Herrmann</surname> <given-names>E</given-names></name> <name><surname>Haule</surname> <given-names>A</given-names></name> <name><surname>Kuta</surname> <given-names>E</given-names></name> <name><surname>McCutchan</surname> <given-names>F</given-names></name> <etal/></person-group> <article-title>CD8 T-cell recognition of multiple epitopes within specific Gag regions is associated with maintenance of a low steady-state viremia in human immunodeficiency virus type 1-seropositive patients</article-title>. <source>J Virol</source> (<year>2007</year>) <volume>81</volume>(<issue>5</issue>):<fpage>2440</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.01847-06</pub-id><pub-id pub-id-type="pmid">17182686</pub-id></citation></ref>
<ref id="B99"><label>99</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Akinsiku</surname> <given-names>OT</given-names></name> <name><surname>Bansal</surname> <given-names>A</given-names></name> <name><surname>Sabbaj</surname> <given-names>S</given-names></name> <name><surname>Heath</surname> <given-names>SL</given-names></name> <name><surname>Goepfert</surname> <given-names>PA</given-names></name></person-group>. <article-title>Interleukin-2 production by polyfunctional HIV-1-specific CD8 T cells is associated with enhanced viral suppression</article-title>. <source>J Acquir Immune Defic Syndr</source> (<year>2011</year>) <volume>58</volume>(<issue>2</issue>):<fpage>132</fpage>&#x02013;<lpage>40</lpage>.<pub-id pub-id-type="doi">10.1097/QAI.0b013e318224d2e9</pub-id><pub-id pub-id-type="pmid">21637109</pub-id></citation></ref>
<ref id="B100"><label>100</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Betts</surname> <given-names>MR</given-names></name> <name><surname>Nason</surname> <given-names>MC</given-names></name> <name><surname>West</surname> <given-names>SM</given-names></name> <name><surname>De Rosa</surname> <given-names>SC</given-names></name> <name><surname>Migueles</surname> <given-names>SA</given-names></name> <name><surname>Abraham</surname> <given-names>J</given-names></name> <etal/></person-group> <article-title>HIV nonprogressors preferentially maintain highly functional HIV-specific CD8&#x0002B; T cells</article-title>. <source>Blood</source> (<year>2006</year>) <volume>107</volume>(<issue>12</issue>):<fpage>4781</fpage>&#x02013;<lpage>9</lpage>.<pub-id pub-id-type="doi">10.1182/blood-2005-12-4818</pub-id><pub-id pub-id-type="pmid">16467198</pub-id></citation></ref>
<ref id="B101"><label>101</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Thobakgale</surname> <given-names>CF</given-names></name> <name><surname>Streeck</surname> <given-names>H</given-names></name> <name><surname>Mkhwanazi</surname> <given-names>N</given-names></name> <name><surname>Mncube</surname> <given-names>Z</given-names></name> <name><surname>Maphumulo</surname> <given-names>L</given-names></name> <name><surname>Chonco</surname> <given-names>F</given-names></name> <etal/></person-group> <article-title>Short communication: CD8(&#x0002B;) T cell polyfunctionality profiles in progressive and nonprogressive pediatric HIV type 1 infection</article-title>. <source>AIDS Res Hum Retroviruses</source> (<year>2011</year>) <volume>27</volume>(<issue>9</issue>):<fpage>1005</fpage>&#x02013;<lpage>12</lpage>.<pub-id pub-id-type="doi">10.1089/AID.2010.0227</pub-id><pub-id pub-id-type="pmid">21288139</pub-id></citation></ref>
<ref id="B102"><label>102</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Migueles</surname> <given-names>SA</given-names></name> <name><surname>Laborico</surname> <given-names>AC</given-names></name> <name><surname>Shupert</surname> <given-names>WL</given-names></name> <name><surname>Sabbaghian</surname> <given-names>MS</given-names></name> <name><surname>Rabin</surname> <given-names>R</given-names></name> <name><surname>Hallahan</surname> <given-names>CW</given-names></name> <etal/></person-group> <article-title>HIV-specific CD8&#x0002B; T cell proliferation is coupled to perforin expression and is maintained in nonprogressors</article-title>. <source>Nat Immunol</source> (<year>2002</year>) <volume>3</volume>(<issue>11</issue>):<fpage>1061</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1038/ni845</pub-id><pub-id pub-id-type="pmid">12368910</pub-id></citation></ref>
<ref id="B103"><label>103</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Grakoui</surname> <given-names>A</given-names></name> <name><surname>Shoukry</surname> <given-names>NH</given-names></name> <name><surname>Woollard</surname> <given-names>DJ</given-names></name> <name><surname>Han</surname> <given-names>JH</given-names></name> <name><surname>Hanson</surname> <given-names>HL</given-names></name> <name><surname>Ghrayeb</surname> <given-names>J</given-names></name> <etal/></person-group> <article-title>HCV persistence and immune evasion in the absence of memory T cell help</article-title>. <source>Science</source> (<year>2003</year>) <volume>302</volume>(<issue>5645</issue>):<fpage>659</fpage>&#x02013;<lpage>62</lpage>.<pub-id pub-id-type="doi">10.1126/science.1088774</pub-id><pub-id pub-id-type="pmid">14576438</pub-id></citation></ref>
<ref id="B104"><label>104</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lichterfeld</surname> <given-names>M</given-names></name> <name><surname>Kaufmann</surname> <given-names>DE</given-names></name> <name><surname>Yu</surname> <given-names>XG</given-names></name> <name><surname>Mui</surname> <given-names>SK</given-names></name> <name><surname>Addo</surname> <given-names>MM</given-names></name> <name><surname>Johnston</surname> <given-names>MN</given-names></name> <etal/></person-group> <article-title>Loss of HIV-1-specific CD8&#x0002B; T cell proliferation after acute HIV-1 infection and restoration by vaccine-induced HIV-1-specific CD4&#x0002B; T cells</article-title>. <source>J Exp Med</source> (<year>2004</year>) <volume>200</volume>(<issue>6</issue>):<fpage>701</fpage>&#x02013;<lpage>12</lpage>.<pub-id pub-id-type="doi">10.1084/jem.20041270</pub-id><pub-id pub-id-type="pmid">15381726</pub-id></citation></ref>
<ref id="B105"><label>105</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shedlock</surname> <given-names>DJ</given-names></name> <name><surname>Shen</surname> <given-names>H</given-names></name></person-group>. <article-title>Requirement for CD4 T cell help in generating functional CD8 T cell memory</article-title>. <source>Science</source> (<year>2003</year>) <volume>300</volume>(<issue>5617</issue>):<fpage>337</fpage>&#x02013;<lpage>9</lpage>.<pub-id pub-id-type="doi">10.1126/science.1082305</pub-id><pub-id pub-id-type="pmid">12690201</pub-id></citation></ref>
<ref id="B106"><label>106</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sun</surname> <given-names>JC</given-names></name> <name><surname>Bevan</surname> <given-names>MJ</given-names></name></person-group>. <article-title>Defective CD8 T cell memory following acute infection without CD4 T cell help</article-title>. <source>Science</source> (<year>2003</year>) <volume>300</volume>(<issue>5617</issue>):<fpage>339</fpage>&#x02013;<lpage>42</lpage>.<pub-id pub-id-type="doi">10.1126/science.1083317</pub-id><pub-id pub-id-type="pmid">12690202</pub-id></citation></ref>
<ref id="B107"><label>107</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Guadalupe</surname> <given-names>M</given-names></name> <name><surname>Reay</surname> <given-names>E</given-names></name> <name><surname>Sankaran</surname> <given-names>S</given-names></name> <name><surname>Prindiville</surname> <given-names>T</given-names></name> <name><surname>Flamm</surname> <given-names>J</given-names></name> <name><surname>McNeil</surname> <given-names>A</given-names></name> <etal/></person-group> <article-title>Severe CD4&#x0002B; T-cell depletion in gut lymphoid tissue during primary human immunodeficiency virus type 1 infection and substantial delay in restoration following highly active antiretroviral therapy</article-title>. <source>J Virol</source> (<year>2003</year>) <volume>77</volume>(<issue>21</issue>):<fpage>11708</fpage>&#x02013;<lpage>17</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.77.21.11708-11717.2003</pub-id><pub-id pub-id-type="pmid">14557656</pub-id></citation></ref>
<ref id="B108"><label>108</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Mattapallil</surname> <given-names>JJ</given-names></name> <name><surname>Douek</surname> <given-names>DC</given-names></name> <name><surname>Hill</surname> <given-names>B</given-names></name> <name><surname>Nishimura</surname> <given-names>Y</given-names></name> <name><surname>Martin</surname> <given-names>M</given-names></name> <name><surname>Roederer</surname> <given-names>M</given-names></name></person-group>. <article-title>Massive infection and loss of memory CD4&#x0002B; T cells in multiple tissues during acute SIV infection</article-title>. <source>Nature</source> (<year>2005</year>) <volume>434</volume>(<issue>7037</issue>):<fpage>1093</fpage>&#x02013;<lpage>7</lpage>.<pub-id pub-id-type="doi">10.1038/nature03501</pub-id><pub-id pub-id-type="pmid">15793563</pub-id></citation></ref>
<ref id="B109"><label>109</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Douek</surname> <given-names>DC</given-names></name> <name><surname>Brenchley</surname> <given-names>JM</given-names></name> <name><surname>Betts</surname> <given-names>MR</given-names></name> <name><surname>Ambrozak</surname> <given-names>DR</given-names></name> <name><surname>Hill</surname> <given-names>BJ</given-names></name> <name><surname>Okamoto</surname> <given-names>Y</given-names></name> <etal/></person-group> <article-title>HIV preferentially infects HIV-specific CD4&#x0002B; T cells</article-title>. <source>Nature</source> (<year>2002</year>) <volume>417</volume>(<issue>6884</issue>):<fpage>95</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1038/417095a</pub-id><pub-id pub-id-type="pmid">11986671</pub-id></citation></ref>
<ref id="B110"><label>110</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Streeck</surname> <given-names>H</given-names></name> <name><surname>D&#x02019;Souza</surname> <given-names>MP</given-names></name> <name><surname>Littman</surname> <given-names>DR</given-names></name> <name><surname>Crotty</surname> <given-names>S</given-names></name></person-group>. <article-title>Harnessing CD4(&#x0002B;) T cell responses in HIV vaccine development</article-title>. <source>Nat Med</source> (<year>2013</year>) <volume>19</volume>(<issue>2</issue>):<fpage>143</fpage>&#x02013;<lpage>9</lpage>.<pub-id pub-id-type="doi">10.1038/nm.3054</pub-id><pub-id pub-id-type="pmid">23389614</pub-id></citation></ref>
<ref id="B111"><label>111</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chevalier</surname> <given-names>MF</given-names></name> <name><surname>Julg</surname> <given-names>B</given-names></name> <name><surname>Pyo</surname> <given-names>A</given-names></name> <name><surname>Flanders</surname> <given-names>M</given-names></name> <name><surname>Ranasinghe</surname> <given-names>S</given-names></name> <name><surname>Soghoian</surname> <given-names>DZ</given-names></name> <etal/></person-group> <article-title>HIV-1-specific interleukin-21&#x0002B; CD4&#x0002B; T cell responses contribute to durable viral control through the modulation of HIV-specific CD8&#x0002B; T cell function</article-title>. <source>J Virol</source> (<year>2011</year>) <volume>85</volume>(<issue>2</issue>):<fpage>733</fpage>&#x02013;<lpage>41</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.02030-10</pub-id><pub-id pub-id-type="pmid">21047960</pub-id></citation></ref>
<ref id="B112"><label>112</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Norris</surname> <given-names>PJ</given-names></name> <name><surname>Moffett</surname> <given-names>HF</given-names></name> <name><surname>Yang</surname> <given-names>OO</given-names></name> <name><surname>Kaufmann</surname> <given-names>DE</given-names></name> <name><surname>Clark</surname> <given-names>MJ</given-names></name> <name><surname>Addo</surname> <given-names>MM</given-names></name> <etal/></person-group> <article-title>Beyond help: direct effector functions of human immunodeficiency virus type 1-specific CD4(&#x0002B;) T cells</article-title>. <source>J Virol</source> (<year>2004</year>) <volume>78</volume>(<issue>16</issue>):<fpage>8844</fpage>&#x02013;<lpage>51</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.78.16.8844-8851.2004</pub-id><pub-id pub-id-type="pmid">15280492</pub-id></citation></ref>
<ref id="B113"><label>113</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Soghoian</surname> <given-names>DZ</given-names></name> <name><surname>Streeck</surname> <given-names>H</given-names></name></person-group>. <article-title>Cytolytic CD4(&#x0002B;) T cells in viral immunity</article-title>. <source>Expert Rev Vaccines</source> (<year>2010</year>) <volume>9</volume>(<issue>12</issue>):<fpage>1453</fpage>&#x02013;<lpage>63</lpage>.<pub-id pub-id-type="doi">10.1586/erv.10.132</pub-id><pub-id pub-id-type="pmid">21105780</pub-id></citation></ref>
<ref id="B114"><label>114</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Soghoian</surname> <given-names>DZ</given-names></name> <name><surname>Jessen</surname> <given-names>H</given-names></name> <name><surname>Flanders</surname> <given-names>M</given-names></name> <name><surname>Sierra-Davidson</surname> <given-names>K</given-names></name> <name><surname>Cutler</surname> <given-names>S</given-names></name> <name><surname>Pertel</surname> <given-names>T</given-names></name> <etal/></person-group> <article-title>HIV-specific cytolytic CD4 T cell responses during acute HIV infection predict disease outcome</article-title>. <source>Sci Transl Med</source> (<year>2012</year>) <volume>4</volume>(<issue>123</issue>):<fpage>123ra25</fpage>.<pub-id pub-id-type="doi">10.1126/scitranslmed.3003165</pub-id><pub-id pub-id-type="pmid">22378925</pub-id></citation></ref>
<ref id="B115"><label>115</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ranasinghe</surname> <given-names>S</given-names></name> <name><surname>Flanders</surname> <given-names>M</given-names></name> <name><surname>Cutler</surname> <given-names>S</given-names></name> <name><surname>Soghoian</surname> <given-names>DZ</given-names></name> <name><surname>Ghebremichael</surname> <given-names>M</given-names></name> <name><surname>Davis</surname> <given-names>I</given-names></name> <etal/></person-group> <article-title>HIV-specific CD4 T cell responses to different viral proteins have discordant associations with viral load and clinical outcome</article-title>. <source>J Virol</source> (<year>2012</year>) <volume>86</volume>(<issue>1</issue>):<fpage>277</fpage>&#x02013;<lpage>83</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.05577-11</pub-id><pub-id pub-id-type="pmid">22031937</pub-id></citation></ref>
<ref id="B116"><label>116</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ramduth</surname> <given-names>D</given-names></name> <name><surname>Day</surname> <given-names>CL</given-names></name> <name><surname>Thobakgale</surname> <given-names>CF</given-names></name> <name><surname>Mkhwanazi</surname> <given-names>NP</given-names></name> <name><surname>de Pierres</surname> <given-names>C</given-names></name> <name><surname>Reddy</surname> <given-names>S</given-names></name> <etal/></person-group> <article-title>Immunodominant HIV-1 Cd4&#x0002B; T cell epitopes in chronic untreated clade C HIV-1 infection</article-title>. <source>PLoS One</source> (<year>2009</year>) <volume>4</volume>(<issue>4</issue>):<fpage>e5013</fpage>.<pub-id pub-id-type="doi">10.1371/journal.pone.0005013</pub-id><pub-id pub-id-type="pmid">19352428</pub-id></citation></ref>
<ref id="B117"><label>117</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Barrios</surname> <given-names>C</given-names></name> <name><surname>Brandt</surname> <given-names>C</given-names></name> <name><surname>Berney</surname> <given-names>M</given-names></name> <name><surname>Lambert</surname> <given-names>PH</given-names></name> <name><surname>Siegrist</surname> <given-names>CA</given-names></name></person-group>. <article-title>Partial correction of the TH2/TH1 imbalance in neonatal murine responses to vaccine antigens through selective adjuvant effects</article-title>. <source>Eur J Immunol</source> (<year>1996</year>) <volume>26</volume>(<issue>11</issue>):<fpage>2666</fpage>&#x02013;<lpage>70</lpage>.<pub-id pub-id-type="doi">10.1002/eji.1830261118</pub-id><pub-id pub-id-type="pmid">8921953</pub-id></citation></ref>
<ref id="B118"><label>118</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Prescott</surname> <given-names>SL</given-names></name> <name><surname>Macaubas</surname> <given-names>C</given-names></name> <name><surname>Holt</surname> <given-names>BJ</given-names></name> <name><surname>Smallacombe</surname> <given-names>TB</given-names></name> <name><surname>Loh</surname> <given-names>R</given-names></name> <name><surname>Sly</surname> <given-names>PD</given-names></name> <etal/></person-group> <article-title>Transplacental priming of the human immune system to environmental allergens: universal skewing of initial T cell responses toward the Th2 cytokine profile</article-title>. <source>J Immunol</source> (<year>1998</year>) <volume>160</volume>(<issue>10</issue>):<fpage>4730</fpage>&#x02013;<lpage>7</lpage>.<pub-id pub-id-type="pmid">9590218</pub-id></citation></ref>
<ref id="B119"><label>119</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Adkins</surname> <given-names>B</given-names></name> <name><surname>Bu</surname> <given-names>Y</given-names></name> <name><surname>Guevara</surname> <given-names>P</given-names></name></person-group>. <article-title>The generation of Th memory in neonates versus adults: prolonged primary Th2 effector function and impaired development of Th1 memory effector function in murine neonates</article-title>. <source>J Immunol</source> (<year>2001</year>) <volume>166</volume>(<issue>2</issue>):<fpage>918</fpage>&#x02013;<lpage>25</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.166.2.918</pub-id><pub-id pub-id-type="pmid">11145668</pub-id></citation></ref>
<ref id="B120"><label>120</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Upham</surname> <given-names>JW</given-names></name> <name><surname>Lee</surname> <given-names>PT</given-names></name> <name><surname>Holt</surname> <given-names>BJ</given-names></name> <name><surname>Heaton</surname> <given-names>T</given-names></name> <name><surname>Prescott</surname> <given-names>SL</given-names></name> <name><surname>Sharp</surname> <given-names>MJ</given-names></name> <etal/></person-group> <article-title>Development of interleukin-12-producing capacity throughout childhood</article-title>. <source>Infect Immun</source> (<year>2002</year>) <volume>70</volume>(<issue>12</issue>):<fpage>6583</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1128/IAI.70.12.6583-6588.2002</pub-id><pub-id pub-id-type="pmid">12438328</pub-id></citation></ref>
<ref id="B121"><label>121</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Cleary</surname> <given-names>AM</given-names></name> <name><surname>Tu</surname> <given-names>W</given-names></name> <name><surname>Enright</surname> <given-names>A</given-names></name> <name><surname>Giffon</surname> <given-names>T</given-names></name> <name><surname>Dewaal-Malefyt</surname> <given-names>R</given-names></name> <name><surname>Gutierrez</surname> <given-names>K</given-names></name> <etal/></person-group> <article-title>Impaired accumulation and function of memory CD4 T cells in human IL-12 receptor beta 1 deficiency</article-title>. <source>J Immunol</source> (<year>2003</year>) <volume>170</volume>(<issue>1</issue>):<fpage>597</fpage>&#x02013;<lpage>603</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.170.1.597</pub-id><pub-id pub-id-type="pmid">12496448</pub-id></citation></ref>
<ref id="B122"><label>122</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yap</surname> <given-names>G</given-names></name> <name><surname>Pesin</surname> <given-names>M</given-names></name> <name><surname>Sher</surname> <given-names>A</given-names></name></person-group>. <article-title>Cutting edge: IL-12 is required for the maintenance of IFN-gamma production in T cells mediating chronic resistance to the intracellular pathogen, Toxoplasma gondii</article-title>. <source>J Immunol</source> (<year>2000</year>) <volume>165</volume>(<issue>2</issue>):<fpage>628</fpage>&#x02013;<lpage>31</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.165.2.628</pub-id><pub-id pub-id-type="pmid">10878333</pub-id></citation></ref>
<ref id="B123"><label>123</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>X</given-names></name> <name><surname>Mozeleski</surname> <given-names>B</given-names></name> <name><surname>Lemoine</surname> <given-names>S</given-names></name> <name><surname>Deriaud</surname> <given-names>E</given-names></name> <name><surname>Lim</surname> <given-names>A</given-names></name> <name><surname>Zhivaki</surname> <given-names>D</given-names></name> <etal/></person-group> <article-title>CD4 T cells with effector memory phenotype and function develop in the sterile environment of the fetus</article-title>. <source>Sci Transl Med</source> (<year>2014</year>) <volume>6</volume>(<issue>238</issue>):<fpage>238ra72</fpage>.<pub-id pub-id-type="doi">10.1126/scitranslmed.3008748</pub-id><pub-id pub-id-type="pmid">24871133</pub-id></citation></ref>
<ref id="B124"><label>124</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ramduth</surname> <given-names>D</given-names></name> <name><surname>Thobakgale</surname> <given-names>CF</given-names></name> <name><surname>Mkhwanazi</surname> <given-names>NP</given-names></name> <name><surname>De Pierres</surname> <given-names>C</given-names></name> <name><surname>Reddy</surname> <given-names>S</given-names></name> <name><surname>van der Stok</surname> <given-names>M</given-names></name> <etal/></person-group> <article-title>Detection of HIV type 1 gag-specific CD4(&#x0002B;) T cell responses in acutely infected infants</article-title>. <source>AIDS Res Hum Retroviruses</source> (<year>2008</year>) <volume>24</volume>(<issue>2</issue>):<fpage>265</fpage>&#x02013;<lpage>70</lpage>.<pub-id pub-id-type="doi">10.1089/aid.2007.0096</pub-id><pub-id pub-id-type="pmid">18284325</pub-id></citation></ref>
<ref id="B125"><label>125</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hartigan-O&#x02019;Connor</surname> <given-names>DJ</given-names></name> <name><surname>Abel</surname> <given-names>K</given-names></name> <name><surname>McCune</surname> <given-names>JM</given-names></name></person-group>. <article-title>Suppression of SIV-specific CD4&#x0002B; T cells by infant but not adult macaque regulatory T cells: implications for SIV disease progression</article-title>. <source>J Exp Med</source> (<year>2007</year>) <volume>204</volume>(<issue>11</issue>):<fpage>2679</fpage>&#x02013;<lpage>92</lpage>.<pub-id pub-id-type="doi">10.1084/jem.20071068</pub-id><pub-id pub-id-type="pmid">17954571</pub-id></citation></ref>
<ref id="B126"><label>126</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Imami</surname> <given-names>N</given-names></name> <name><surname>Westrop</surname> <given-names>SJ</given-names></name> <name><surname>Grageda</surname> <given-names>N</given-names></name> <name><surname>Herasimtschuk</surname> <given-names>AA</given-names></name></person-group>. <article-title>Long-term non-progression and broad HIV-1-specific proliferative T-cell responses</article-title>. <source>Front Immunol</source> (<year>2013</year>) <volume>4</volume>:<fpage>58</fpage>.<pub-id pub-id-type="doi">10.3389/fimmu.2013.00058</pub-id><pub-id pub-id-type="pmid">23459797</pub-id></citation></ref>
<ref id="B127"><label>127</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rosenberg</surname> <given-names>ES</given-names></name> <name><surname>Billingsley</surname> <given-names>JM</given-names></name> <name><surname>Caliendo</surname> <given-names>AM</given-names></name> <name><surname>Boswell</surname> <given-names>SL</given-names></name> <name><surname>Sax</surname> <given-names>PE</given-names></name> <name><surname>Kalams</surname> <given-names>SA</given-names></name> <etal/></person-group> <article-title>Vigorous HIV-1-specific CD4&#x0002B; T cell responses associated with control of viremia</article-title>. <source>Science</source> (<year>1997</year>) <volume>278</volume>(<issue>5342</issue>):<fpage>1447</fpage>&#x02013;<lpage>50</lpage>.<pub-id pub-id-type="doi">10.1126/science.278.5342.1447</pub-id><pub-id pub-id-type="pmid">9367954</pub-id></citation></ref>
<ref id="B128"><label>128</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>McNeil</surname> <given-names>AC</given-names></name> <name><surname>Shupert</surname> <given-names>WL</given-names></name> <name><surname>Iyasere</surname> <given-names>CA</given-names></name> <name><surname>Hallahan</surname> <given-names>CW</given-names></name> <name><surname>Mican</surname> <given-names>JA</given-names></name> <name><surname>Davey</surname> <given-names>RT</given-names> <suffix>Jr.</suffix></name> <etal/></person-group> <article-title>High-level HIV-1 viremia suppresses viral antigen-specific CD4(&#x0002B;) T cell proliferation</article-title>. <source>Proc Natl Acad Sci USA</source> (<year>2001</year>) <volume>98</volume>(<issue>24</issue>):<fpage>13878</fpage>&#x02013;<lpage>83</lpage>.<pub-id pub-id-type="doi">10.1073/pnas.251539598</pub-id><pub-id pub-id-type="pmid">11717444</pub-id></citation></ref>
<ref id="B129"><label>129</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Boaz</surname> <given-names>MJ</given-names></name> <name><surname>Waters</surname> <given-names>A</given-names></name> <name><surname>Murad</surname> <given-names>S</given-names></name> <name><surname>Easterbrook</surname> <given-names>PJ</given-names></name> <name><surname>Vyakarnam</surname> <given-names>A</given-names></name></person-group>. <article-title>Presence of HIV-1 Gag-specific IFN-gamma&#x0002B;IL-2&#x0002B; and CD28&#x0002B;IL-2&#x0002B; CD4 T cell responses is associated with nonprogression in HIV-1 infection</article-title>. <source>J Immunol</source> (<year>2002</year>) <volume>169</volume>(<issue>11</issue>):<fpage>6376</fpage>&#x02013;<lpage>85</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.169.11.6376</pub-id><pub-id pub-id-type="pmid">12444145</pub-id></citation></ref>
<ref id="B130"><label>130</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Emu</surname> <given-names>B</given-names></name> <name><surname>Sinclair</surname> <given-names>E</given-names></name> <name><surname>Favre</surname> <given-names>D</given-names></name> <name><surname>Moretto</surname> <given-names>WJ</given-names></name> <name><surname>Hsue</surname> <given-names>P</given-names></name> <name><surname>Hoh</surname> <given-names>R</given-names></name> <etal/></person-group> <article-title>Phenotypic, functional, and kinetic parameters associated with apparent T-cell control of human immunodeficiency virus replication in individuals with and without antiretroviral treatment</article-title>. <source>J Virol</source> (<year>2005</year>) <volume>79</volume>(<issue>22</issue>):<fpage>14169</fpage>&#x02013;<lpage>78</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.79.22.14169-14178.2005</pub-id><pub-id pub-id-type="pmid">16254352</pub-id></citation></ref>
<ref id="B131"><label>131</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Liao</surname> <given-names>W</given-names></name> <name><surname>Lin</surname> <given-names>JX</given-names></name> <name><surname>Leonard</surname> <given-names>WJ</given-names></name></person-group>. <article-title>Interleukin-2 at the crossroads of effector responses, tolerance, and immunotherapy</article-title>. <source>Immunity</source> (<year>2013</year>) <volume>38</volume>(<issue>1</issue>):<fpage>13</fpage>&#x02013;<lpage>25</lpage>.<pub-id pub-id-type="doi">10.1016/j.immuni.2013.01.004</pub-id><pub-id pub-id-type="pmid">23352221</pub-id></citation></ref>
<ref id="B132"><label>132</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Scott</surname> <given-names>ZA</given-names></name> <name><surname>Beaumier</surname> <given-names>CM</given-names></name> <name><surname>Sharkey</surname> <given-names>M</given-names></name> <name><surname>Stevenson</surname> <given-names>M</given-names></name> <name><surname>Luzuriaga</surname> <given-names>K</given-names></name></person-group>. <article-title>HIV-1 replication increases HIV-specific CD4&#x0002B; T cell frequencies but limits proliferative capacity in chronically infected children</article-title>. <source>J Immunol</source> (<year>2003</year>) <volume>170</volume>(<issue>11</issue>):<fpage>5786</fpage>&#x02013;<lpage>92</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.170.11.5786</pub-id><pub-id pub-id-type="pmid">12759463</pub-id></citation></ref>
<ref id="B133"><label>133</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Feeney</surname> <given-names>ME</given-names></name> <name><surname>Draenert</surname> <given-names>R</given-names></name> <name><surname>Roosevelt</surname> <given-names>KA</given-names></name> <name><surname>Pelton</surname> <given-names>SI</given-names></name> <name><surname>McIntosh</surname> <given-names>K</given-names></name> <name><surname>Burchett</surname> <given-names>SK</given-names></name> <etal/></person-group> <article-title>Reconstitution of virus-specific CD4 proliferative responses in pediatric HIV-1 infection</article-title>. <source>J Immunol</source> (<year>2003</year>) <volume>171</volume>(<issue>12</issue>):<fpage>6968</fpage>&#x02013;<lpage>75</lpage>.<pub-id pub-id-type="doi">10.4049/jimmunol.171.12.6968</pub-id><pub-id pub-id-type="pmid">14662905</pub-id></citation></ref>
<ref id="B134"><label>134</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kuhn</surname> <given-names>L</given-names></name> <name><surname>Meddows-Taylor</surname> <given-names>S</given-names></name> <name><surname>Gray</surname> <given-names>G</given-names></name> <name><surname>Tiemessen</surname> <given-names>C</given-names></name></person-group>. <article-title>Human immunodeficiency virus (HIV)-specific cellular immune responses in newborns exposed to HIV in utero</article-title>. <source>Clin Infect Dis</source> (<year>2002</year>) <volume>34</volume>(<issue>2</issue>):<fpage>267</fpage>&#x02013;<lpage>76</lpage>.<pub-id pub-id-type="doi">10.1086/338153</pub-id></citation></ref>
<ref id="B135"><label>135</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Barber</surname> <given-names>DL</given-names></name> <name><surname>Wherry</surname> <given-names>EJ</given-names></name> <name><surname>Masopust</surname> <given-names>D</given-names></name> <name><surname>Zhu</surname> <given-names>B</given-names></name> <name><surname>Allison</surname> <given-names>JP</given-names></name> <name><surname>Sharpe</surname> <given-names>AH</given-names></name> <etal/></person-group> <article-title>Restoring function in exhausted CD8 T cells during chronic viral infection</article-title>. <source>Nature</source> (<year>2006</year>) <volume>439</volume>(<issue>7077</issue>):<fpage>682</fpage>&#x02013;<lpage>7</lpage>.<pub-id pub-id-type="doi">10.1038/nature04444</pub-id><pub-id pub-id-type="pmid">16382236</pub-id></citation></ref>
<ref id="B136"><label>136</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Day</surname> <given-names>CL</given-names></name> <name><surname>Kaufmann</surname> <given-names>DE</given-names></name> <name><surname>Kiepiela</surname> <given-names>P</given-names></name> <name><surname>Brown</surname> <given-names>JA</given-names></name> <name><surname>Moodley</surname> <given-names>ES</given-names></name> <name><surname>Reddy</surname> <given-names>S</given-names></name> <etal/></person-group> <article-title>PD-1 expression on HIV-specific T cells is associated with T-cell exhaustion and disease progression</article-title>. <source>Nature</source> (<year>2006</year>) <volume>443</volume>(<issue>7109</issue>):<fpage>350</fpage>&#x02013;<lpage>4</lpage>.<pub-id pub-id-type="doi">10.1038/nature05115</pub-id><pub-id pub-id-type="pmid">16921384</pub-id></citation></ref>
<ref id="B137"><label>137</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Jones</surname> <given-names>RB</given-names></name> <name><surname>Ndhlovu</surname> <given-names>LC</given-names></name> <name><surname>Barbour</surname> <given-names>JD</given-names></name> <name><surname>Sheth</surname> <given-names>PM</given-names></name> <name><surname>Jha</surname> <given-names>AR</given-names></name> <name><surname>Long</surname> <given-names>BR</given-names></name> <etal/></person-group> <article-title>Tim-3 expression defines a novel population of dysfunctional T cells with highly elevated frequencies in progressive HIV-1 infection</article-title>. <source>J Exp Med</source> (<year>2008</year>) <volume>205</volume>(<issue>12</issue>):<fpage>2763</fpage>&#x02013;<lpage>79</lpage>.<pub-id pub-id-type="doi">10.1084/jem.20081398</pub-id><pub-id pub-id-type="pmid">19001139</pub-id></citation></ref>
<ref id="B138"><label>138</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Peretz</surname> <given-names>Y</given-names></name> <name><surname>He</surname> <given-names>Z</given-names></name> <name><surname>Shi</surname> <given-names>Y</given-names></name> <name><surname>Yassine-Diab</surname> <given-names>B</given-names></name> <name><surname>Goulet</surname> <given-names>JP</given-names></name> <name><surname>Bordi</surname> <given-names>R</given-names></name> <etal/></person-group> <article-title>CD160 and PD-1 co-expression on HIV-specific CD8 T cells defines a subset with advanced dysfunction</article-title>. <source>PLoS Pathog</source> (<year>2012</year>) <volume>8</volume>(<issue>8</issue>):<fpage>e1002840</fpage>.<pub-id pub-id-type="doi">10.1371/journal.ppat.1002840</pub-id><pub-id pub-id-type="pmid">22916009</pub-id></citation></ref>
<ref id="B139"><label>139</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Blackburn</surname> <given-names>SD</given-names></name> <name><surname>Shin</surname> <given-names>H</given-names></name> <name><surname>Haining</surname> <given-names>WN</given-names></name> <name><surname>Zou</surname> <given-names>T</given-names></name> <name><surname>Workman</surname> <given-names>CJ</given-names></name> <name><surname>Polley</surname> <given-names>A</given-names></name> <etal/></person-group> <article-title>Coregulation of CD8&#x0002B; T cell exhaustion by multiple inhibitory receptors during chronic viral infection</article-title>. <source>Nat Immunol</source> (<year>2009</year>) <volume>10</volume>(<issue>1</issue>):<fpage>29</fpage>&#x02013;<lpage>37</lpage>.<pub-id pub-id-type="doi">10.1038/ni.1679</pub-id><pub-id pub-id-type="pmid">19043418</pub-id></citation></ref>
<ref id="B140"><label>140</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kaufmann</surname> <given-names>DE</given-names></name> <name><surname>Kavanagh</surname> <given-names>DG</given-names></name> <name><surname>Pereyra</surname> <given-names>F</given-names></name> <name><surname>Zaunders</surname> <given-names>JJ</given-names></name> <name><surname>Mackey</surname> <given-names>EW</given-names></name> <name><surname>Miura</surname> <given-names>T</given-names></name> <etal/></person-group> <article-title>Upregulation of CTLA-4 by HIV-specific CD4&#x0002B; T cells correlates with disease progression and defines a reversible immune dysfunction</article-title>. <source>Nat Immunol</source> (<year>2007</year>) <volume>8</volume>(<issue>11</issue>):<fpage>1246</fpage>&#x02013;<lpage>54</lpage>.<pub-id pub-id-type="doi">10.1038/ni1515</pub-id><pub-id pub-id-type="pmid">17906628</pub-id></citation></ref>
<ref id="B141"><label>141</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Zhang</surname> <given-names>JY</given-names></name> <name><surname>Zhang</surname> <given-names>Z</given-names></name> <name><surname>Wang</surname> <given-names>X</given-names></name> <name><surname>Fu</surname> <given-names>JL</given-names></name> <name><surname>Yao</surname> <given-names>J</given-names></name> <name><surname>Jiao</surname> <given-names>Y</given-names></name> <etal/></person-group> <article-title>PD-1 up-regulation is correlated with HIV-specific memory CD8&#x0002B; T-cell exhaustion in typical progressors but not in long-term nonprogressors</article-title>. <source>Blood</source> (<year>2007</year>) <volume>109</volume>(<issue>11</issue>):<fpage>4671</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1182/blood-2006-09-044826</pub-id><pub-id pub-id-type="pmid">17272504</pub-id></citation></ref>
<ref id="B142"><label>142</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yao</surname> <given-names>S</given-names></name> <name><surname>Zhu</surname> <given-names>Y</given-names></name> <name><surname>Chen</surname> <given-names>L</given-names></name></person-group>. <article-title>Advances in targeting cell surface signalling molecules for immune modulation</article-title>. <source>Nat Rev Drug Dis</source> (<year>2013</year>) <volume>12</volume>(<issue>2</issue>):<fpage>130</fpage>&#x02013;<lpage>46</lpage>.<pub-id pub-id-type="doi">10.1038/nrd3877</pub-id><pub-id pub-id-type="pmid">23370250</pub-id></citation></ref>
<ref id="B143"><label>143</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Porichis</surname> <given-names>F</given-names></name> <name><surname>Kaufmann</surname> <given-names>DE</given-names></name></person-group>. <article-title>HIV-specific CD4 T cells and immune control of viral replication</article-title>. <source>Curr Opin HIV AIDS</source> (<year>2011</year>) <volume>6</volume>(<issue>3</issue>):<fpage>174</fpage>&#x02013;<lpage>80</lpage>.<pub-id pub-id-type="doi">10.1097/COH.0b013e3283454058</pub-id><pub-id pub-id-type="pmid">21502921</pub-id></citation></ref>
<ref id="B144"><label>144</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Tandon</surname> <given-names>R</given-names></name> <name><surname>Giret</surname> <given-names>MT</given-names></name> <name><surname>Sengupta</surname> <given-names>D</given-names></name> <name><surname>York</surname> <given-names>VA</given-names></name> <name><surname>Wiznia</surname> <given-names>AA</given-names></name> <name><surname>Rosenberg</surname> <given-names>MG</given-names></name> <etal/></person-group> <article-title>Age-related expansion of Tim-3 expressing T cells in vertically HIV-1 infected children</article-title>. <source>PLoS One</source> (<year>2012</year>) <volume>7</volume>(<issue>9</issue>):<fpage>e45733</fpage>.<pub-id pub-id-type="doi">10.1371/journal.pone.0045733</pub-id><pub-id pub-id-type="pmid">23029209</pub-id></citation></ref>
<ref id="B145"><label>145</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kuller</surname> <given-names>LH</given-names></name> <name><surname>Tracy</surname> <given-names>R</given-names></name> <name><surname>Belloso</surname> <given-names>W</given-names></name> <name><surname>De Wit</surname> <given-names>S</given-names></name> <name><surname>Drummond</surname> <given-names>F</given-names></name> <name><surname>Lane</surname> <given-names>HC</given-names></name> <etal/></person-group> <article-title>Inflammatory and coagulation biomarkers and mortality in patients with HIV infection</article-title>. <source>PLoS Med</source> (<year>2008</year>) <volume>5</volume>(<issue>10</issue>):<fpage>e203</fpage>.<pub-id pub-id-type="doi">10.1371/journal.pmed.0050203</pub-id><pub-id pub-id-type="pmid">18942885</pub-id></citation></ref>
<ref id="B146"><label>146</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rodger</surname> <given-names>AJ</given-names></name> <name><surname>Fox</surname> <given-names>Z</given-names></name> <name><surname>Lundgren</surname> <given-names>JD</given-names></name> <name><surname>Kuller</surname> <given-names>LH</given-names></name> <name><surname>Boesecke</surname> <given-names>C</given-names></name> <name><surname>Gey</surname> <given-names>D</given-names></name> <etal/></person-group> <article-title>Activation and coagulation biomarkers are independent predictors of the development of opportunistic disease in patients with HIV infection</article-title>. <source>J Infect Dis</source> (<year>2009</year>) <volume>200</volume>(<issue>6</issue>):<fpage>973</fpage>&#x02013;<lpage>83</lpage>.<pub-id pub-id-type="doi">10.1086/605447</pub-id><pub-id pub-id-type="pmid">19678756</pub-id></citation></ref>
<ref id="B147"><label>147</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Serrano-Villar</surname> <given-names>S</given-names></name> <name><surname>Gutierrez</surname> <given-names>C</given-names></name> <name><surname>Vallejo</surname> <given-names>A</given-names></name> <name><surname>Hernandez-Novoa</surname> <given-names>B</given-names></name> <name><surname>Diaz</surname> <given-names>L</given-names></name> <name><surname>Abad Fernandez</surname> <given-names>M</given-names></name> <etal/></person-group> <article-title>The CD4/CD8 ratio in HIV-infected subjects is independently associated with T-cell activation despite long-term viral suppression</article-title>. <source>J Infect</source> (<year>2013</year>) <volume>66</volume>(<issue>1</issue>):<fpage>57</fpage>&#x02013;<lpage>66</lpage>.<pub-id pub-id-type="doi">10.1016/j.jinf.2012.09.013</pub-id><pub-id pub-id-type="pmid">23046968</pub-id></citation></ref>
<ref id="B148"><label>148</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Deeks</surname> <given-names>SG</given-names></name> <name><surname>Kitchen</surname> <given-names>CM</given-names></name> <name><surname>Liu</surname> <given-names>L</given-names></name> <name><surname>Guo</surname> <given-names>H</given-names></name> <name><surname>Gascon</surname> <given-names>R</given-names></name> <name><surname>Narvaez</surname> <given-names>AB</given-names></name> <etal/></person-group> <article-title>Immune activation set point during early HIV infection predicts subsequent CD4&#x0002B; T-cell changes independent of viral load</article-title>. <source>Blood</source> (<year>2004</year>) <volume>104</volume>(<issue>4</issue>):<fpage>942</fpage>&#x02013;<lpage>7</lpage>.<pub-id pub-id-type="doi">10.1182/blood-2003-09-3333</pub-id><pub-id pub-id-type="pmid">15117761</pub-id></citation></ref>
<ref id="B149"><label>149</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hazenberg</surname> <given-names>MD</given-names></name> <name><surname>Otto</surname> <given-names>SA</given-names></name> <name><surname>van Benthem</surname> <given-names>BH</given-names></name> <name><surname>Roos</surname> <given-names>MT</given-names></name> <name><surname>Coutinho</surname> <given-names>RA</given-names></name> <name><surname>Lange</surname> <given-names>JM</given-names></name> <etal/></person-group> <article-title>Persistent immune activation in HIV-1 infection is associated with progression to AIDS</article-title>. <source>AIDS</source> (<year>2003</year>) <volume>17</volume>(<issue>13</issue>):<fpage>1881</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1097/00002030-200309050-00006</pub-id><pub-id pub-id-type="pmid">12960820</pub-id></citation></ref>
<ref id="B150"><label>150</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Doitsh</surname> <given-names>G</given-names></name> <name><surname>Galloway</surname> <given-names>NL</given-names></name> <name><surname>Geng</surname> <given-names>X</given-names></name> <name><surname>Yang</surname> <given-names>Z</given-names></name> <name><surname>Monroe</surname> <given-names>KM</given-names></name> <name><surname>Zepeda</surname> <given-names>O</given-names></name> <etal/></person-group> <article-title>Cell death by pyroptosis drives CD4 T-cell depletion in HIV-1 infection</article-title>. <source>Nature</source> (<year>2014</year>) <volume>505</volume>(<issue>7484</issue>):<fpage>509</fpage>&#x02013;<lpage>14</lpage>.<pub-id pub-id-type="doi">10.1038/nature12940</pub-id><pub-id pub-id-type="pmid">24356306</pub-id></citation></ref>
<ref id="B151"><label>151</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Monroe</surname> <given-names>KM</given-names></name> <name><surname>Yang</surname> <given-names>Z</given-names></name> <name><surname>Johnson</surname> <given-names>JR</given-names></name> <name><surname>Geng</surname> <given-names>X</given-names></name> <name><surname>Doitsh</surname> <given-names>G</given-names></name> <name><surname>Krogan</surname> <given-names>NJ</given-names></name> <etal/></person-group> <article-title>IFI16 DNA sensor is required for death of lymphoid CD4 T cells abortively infected with HIV</article-title>. <source>Science</source> (<year>2014</year>) <volume>343</volume>(<issue>6169</issue>):<fpage>428</fpage>&#x02013;<lpage>32</lpage>.<pub-id pub-id-type="doi">10.1126/science.1243640</pub-id><pub-id pub-id-type="pmid">24356113</pub-id></citation></ref>
<ref id="B152"><label>152</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Giorgi</surname> <given-names>JV</given-names></name> <name><surname>Hultin</surname> <given-names>LE</given-names></name> <name><surname>McKeating</surname> <given-names>JA</given-names></name> <name><surname>Johnson</surname> <given-names>TD</given-names></name> <name><surname>Owens</surname> <given-names>B</given-names></name> <name><surname>Jacobson</surname> <given-names>LP</given-names></name> <etal/></person-group> <article-title>Shorter survival in advanced human immunodeficiency virus type 1 infection is more closely associated with T lymphocyte activation than with plasma virus burden or virus chemokine coreceptor usage</article-title>. <source>J Infect Dis</source> (<year>1999</year>) <volume>179</volume>(<issue>4</issue>):<fpage>859</fpage>&#x02013;<lpage>70</lpage>.<pub-id pub-id-type="doi">10.1086/314660</pub-id></citation></ref>
<ref id="B153"><label>153</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Paul</surname> <given-names>ME</given-names></name> <name><surname>Mao</surname> <given-names>C</given-names></name> <name><surname>Charurat</surname> <given-names>M</given-names></name> <name><surname>Serchuck</surname> <given-names>L</given-names></name> <name><surname>Foca</surname> <given-names>M</given-names></name> <name><surname>Hayani</surname> <given-names>K</given-names></name> <etal/></person-group> <article-title>Predictors of immunologic long-term nonprogression in HIV-infected children: implications for initiating therapy</article-title>. <source>J Allergy Clin Immunol</source> (<year>2005</year>) <volume>115</volume>(<issue>4</issue>):<fpage>848</fpage>&#x02013;<lpage>55</lpage>.<pub-id pub-id-type="doi">10.1016/j.jaci.2004.11.054</pub-id><pub-id pub-id-type="pmid">15806009</pub-id></citation></ref>
<ref id="B154"><label>154</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ssewanyana</surname> <given-names>I</given-names></name> <name><surname>Baker</surname> <given-names>CA</given-names></name> <name><surname>Ruel</surname> <given-names>T</given-names></name> <name><surname>Bousheri</surname> <given-names>S</given-names></name> <name><surname>Kamya</surname> <given-names>M</given-names></name> <name><surname>Dorsey</surname> <given-names>G</given-names></name> <etal/></person-group> <article-title>The distribution and immune profile of T cell subsets in HIV-infected children from Uganda</article-title>. <source>AIDS Res Hum Retroviruses</source> (<year>2009</year>) <volume>25</volume>(<issue>1</issue>):<fpage>65</fpage>&#x02013;<lpage>71</lpage>.<pub-id pub-id-type="doi">10.1089/aid.2008.0138</pub-id><pub-id pub-id-type="pmid">19182922</pub-id></citation></ref>
<ref id="B155"><label>155</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chahroudi</surname> <given-names>A</given-names></name> <name><surname>Bosinger</surname> <given-names>SE</given-names></name> <name><surname>Vanderford</surname> <given-names>TH</given-names></name> <name><surname>Paiardini</surname> <given-names>M</given-names></name> <name><surname>Silvestri</surname> <given-names>G</given-names></name></person-group>. <article-title>Natural SIV hosts: showing AIDS the door</article-title>. <source>Science</source> (<year>2012</year>) <volume>335</volume>(<issue>6073</issue>):<fpage>1188</fpage>&#x02013;<lpage>93</lpage>.<pub-id pub-id-type="doi">10.1126/science.1217550</pub-id><pub-id pub-id-type="pmid">22403383</pub-id></citation></ref>
<ref id="B156"><label>156</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Silvestri</surname> <given-names>G</given-names></name> <name><surname>Sodora</surname> <given-names>DL</given-names></name> <name><surname>Koup</surname> <given-names>RA</given-names></name> <name><surname>Paiardini</surname> <given-names>M</given-names></name> <name><surname>O&#x02019;Neil</surname> <given-names>SP</given-names></name> <name><surname>McClure</surname> <given-names>HM</given-names></name> <etal/></person-group> <article-title>Nonpathogenic SIV infection of sooty mangabeys is characterized by limited bystander immunopathology despite chronic high-level viremia</article-title>. <source>Immunity</source> (<year>2003</year>) <volume>18</volume>(<issue>3</issue>):<fpage>441</fpage>&#x02013;<lpage>52</lpage>.<pub-id pub-id-type="doi">10.1016/S1074-7613(03)00060-8</pub-id><pub-id pub-id-type="pmid">12648460</pub-id></citation></ref>
<ref id="B157"><label>157</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Bosinger</surname> <given-names>SE</given-names></name> <name><surname>Li</surname> <given-names>Q</given-names></name> <name><surname>Gordon</surname> <given-names>SN</given-names></name> <name><surname>Klatt</surname> <given-names>NR</given-names></name> <name><surname>Duan</surname> <given-names>L</given-names></name> <name><surname>Xu</surname> <given-names>L</given-names></name> <etal/></person-group> <article-title>Global genomic analysis reveals rapid control of a robust innate response in SIV-infected sooty mangabeys</article-title>. <source>J Clin Invest</source> (<year>2009</year>) <volume>119</volume>(<issue>12</issue>):<fpage>3556</fpage>&#x02013;<lpage>72</lpage>.<pub-id pub-id-type="doi">10.1172/JCI40115</pub-id><pub-id pub-id-type="pmid">19959874</pub-id></citation></ref>
<ref id="B158"><label>158</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Hunt</surname> <given-names>PW</given-names></name> <name><surname>Martin</surname> <given-names>JN</given-names></name> <name><surname>Sinclair</surname> <given-names>E</given-names></name> <name><surname>Epling</surname> <given-names>L</given-names></name> <name><surname>Teague</surname> <given-names>J</given-names></name> <name><surname>Jacobson</surname> <given-names>MA</given-names></name> <etal/></person-group> <article-title>Valganciclovir reduces T cell activation in HIV-infected individuals with incomplete CD4&#x0002B; T cell recovery on antiretroviral therapy</article-title>. <source>J Infect Dis</source> (<year>2011</year>) <volume>203</volume>(<issue>10</issue>):<fpage>1474</fpage>&#x02013;<lpage>83</lpage>.<pub-id pub-id-type="doi">10.1093/infdis/jir060</pub-id><pub-id pub-id-type="pmid">21502083</pub-id></citation></ref>
<ref id="B159"><label>159</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sauce</surname> <given-names>D</given-names></name> <name><surname>Larsen</surname> <given-names>M</given-names></name> <name><surname>Fastenackels</surname> <given-names>S</given-names></name> <name><surname>Pauchard</surname> <given-names>M</given-names></name> <name><surname>Ait-Mohand</surname> <given-names>H</given-names></name> <name><surname>Schneider</surname> <given-names>L</given-names></name> <etal/></person-group> <article-title>HIV disease progression despite suppression of viral replication is associated with exhaustion of lymphopoiesis</article-title>. <source>Blood</source> (<year>2011</year>) <volume>117</volume>(<issue>19</issue>):<fpage>5142</fpage>&#x02013;<lpage>51</lpage>.<pub-id pub-id-type="doi">10.1182/blood-2011-01-331306</pub-id><pub-id pub-id-type="pmid">21436070</pub-id></citation></ref>
<ref id="B160"><label>160</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lederman</surname> <given-names>MM</given-names></name> <name><surname>Calabrese</surname> <given-names>L</given-names></name> <name><surname>Funderburg</surname> <given-names>NT</given-names></name> <name><surname>Clagett</surname> <given-names>B</given-names></name> <name><surname>Medvik</surname> <given-names>K</given-names></name> <name><surname>Bonilla</surname> <given-names>H</given-names></name> <etal/></person-group> <article-title>Immunologic failure despite suppressive antiretroviral therapy is related to activation and turnover of memory CD4 cells</article-title>. <source>J Infect Dis</source> (<year>2011</year>) <volume>204</volume>(<issue>8</issue>):<fpage>1217</fpage>&#x02013;<lpage>26</lpage>.<pub-id pub-id-type="doi">10.1093/infdis/jir507</pub-id><pub-id pub-id-type="pmid">21917895</pub-id></citation></ref>
<ref id="B161"><label>161</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Klatt</surname> <given-names>NR</given-names></name> <name><surname>Chomont</surname> <given-names>N</given-names></name> <name><surname>Douek</surname> <given-names>DC</given-names></name> <name><surname>Deeks</surname> <given-names>SG</given-names></name></person-group>. <article-title>Immune activation and HIV persistence: implications for curative approaches to HIV infection</article-title>. <source>Immunol Rev</source> (<year>2013</year>) <volume>254</volume>(<issue>1</issue>):<fpage>326</fpage>&#x02013;<lpage>42</lpage>.<pub-id pub-id-type="doi">10.1111/imr.12065</pub-id><pub-id pub-id-type="pmid">23772629</pub-id></citation></ref>
<ref id="B162"><label>162</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Phillips</surname> <given-names>AN</given-names></name> <name><surname>Neaton</surname> <given-names>J</given-names></name> <name><surname>Lundgren</surname> <given-names>JD</given-names></name></person-group>. <article-title>The role of HIV in serious diseases other than AIDS</article-title>. <source>AIDS</source> (<year>2008</year>) <volume>22</volume>(<issue>18</issue>):<fpage>2409</fpage>&#x02013;<lpage>18</lpage>.<pub-id pub-id-type="doi">10.1097/QAD.0b013e3283174636</pub-id></citation></ref>
<ref id="B163"><label>163</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Brenchley</surname> <given-names>JM</given-names></name> <name><surname>Schacker</surname> <given-names>TW</given-names></name> <name><surname>Ruff</surname> <given-names>LE</given-names></name> <name><surname>Price</surname> <given-names>DA</given-names></name> <name><surname>Taylor</surname> <given-names>JH</given-names></name> <name><surname>Beilman</surname> <given-names>GJ</given-names></name> <etal/></person-group> <article-title>CD4&#x0002B; T cell depletion during all stages of HIV disease occurs predominantly in the gastrointestinal tract</article-title>. <source>J Exp Med</source> (<year>2004</year>) <volume>200</volume>(<issue>6</issue>):<fpage>749</fpage>&#x02013;<lpage>59</lpage>.<pub-id pub-id-type="doi">10.1084/jem.20040874</pub-id><pub-id pub-id-type="pmid">15365096</pub-id></citation></ref>
<ref id="B164"><label>164</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Xu</surname> <given-names>H</given-names></name> <name><surname>Wang</surname> <given-names>X</given-names></name> <name><surname>Liu</surname> <given-names>DX</given-names></name> <name><surname>Moroney-Rasmussen</surname> <given-names>T</given-names></name> <name><surname>Lackner</surname> <given-names>AA</given-names></name> <name><surname>Veazey</surname> <given-names>RS</given-names></name></person-group>. <article-title>IL-17-producing innate lymphoid cells are restricted to mucosal tissues and are depleted in SIV-infected macaques</article-title>. <source>Mucosal Immunol</source> (<year>2012</year>) <volume>5</volume>(<issue>6</issue>):<fpage>658</fpage>&#x02013;<lpage>69</lpage>.<pub-id pub-id-type="doi">10.1038/mi.2012.39</pub-id><pub-id pub-id-type="pmid">22669579</pub-id></citation></ref>
<ref id="B165"><label>165</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Klatt</surname> <given-names>NR</given-names></name> <name><surname>Funderburg</surname> <given-names>NT</given-names></name> <name><surname>Brenchley</surname> <given-names>JM</given-names></name></person-group>. <article-title>Microbial translocation, immune activation, and HIV disease</article-title>. <source>Trends Microbiol</source> (<year>2013</year>) <volume>21</volume>(<issue>1</issue>):<fpage>6</fpage>&#x02013;<lpage>13</lpage>.<pub-id pub-id-type="doi">10.1016/j.tim.2012.09.001</pub-id></citation></ref>
<ref id="B166"><label>166</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Brenchley</surname> <given-names>JM</given-names></name> <name><surname>Price</surname> <given-names>DA</given-names></name> <name><surname>Schacker</surname> <given-names>TW</given-names></name> <name><surname>Asher</surname> <given-names>TE</given-names></name> <name><surname>Silvestri</surname> <given-names>G</given-names></name> <name><surname>Rao</surname> <given-names>S</given-names></name> <etal/></person-group> <article-title>Microbial translocation is a cause of systemic immune activation in chronic HIV infection</article-title>. <source>Nat Med</source> (<year>2006</year>) <volume>12</volume>(<issue>12</issue>):<fpage>1365</fpage>&#x02013;<lpage>71</lpage>.<pub-id pub-id-type="doi">10.1038/nm1511</pub-id><pub-id pub-id-type="pmid">17115046</pub-id></citation></ref>
<ref id="B167"><label>167</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Paiardini</surname> <given-names>M</given-names></name></person-group>. <article-title>Th17 cells in natural SIV hosts</article-title>. <source>Curr Opin HIV AIDS</source> (<year>2010</year>) <volume>5</volume>(<issue>2</issue>):<fpage>166</fpage>&#x02013;<lpage>72</lpage>.<pub-id pub-id-type="doi">10.1097/COH.0b013e328335c161</pub-id><pub-id pub-id-type="pmid">20543595</pub-id></citation></ref>
<ref id="B168"><label>168</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Abad-Fernandez</surname> <given-names>M</given-names></name> <name><surname>Vallejo</surname> <given-names>A</given-names></name> <name><surname>Hernandez-Novoa</surname> <given-names>B</given-names></name> <name><surname>Diaz</surname> <given-names>L</given-names></name> <name><surname>Gutierrez</surname> <given-names>C</given-names></name> <name><surname>Madrid</surname> <given-names>N</given-names></name> <etal/></person-group> <article-title>Correlation between different methods to measure microbial translocation and its association with immune activation in long-term suppressed HIV-1-infected individuals</article-title>. <source>J Acquir Immune Defic Syndr</source> (<year>2013</year>) <volume>64</volume>(<issue>2</issue>):<fpage>149</fpage>&#x02013;<lpage>53</lpage>.<pub-id pub-id-type="doi">10.1097/QAI.0b013e31829a2f12</pub-id><pub-id pub-id-type="pmid">24047967</pub-id></citation></ref>
<ref id="B169"><label>169</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sherman</surname> <given-names>MP</given-names></name></person-group>. <article-title>New concepts of microbial translocation in the neonatal intestine: mechanisms and prevention</article-title>. <source>Clin Perinatol</source> (<year>2010</year>) <volume>37</volume>(<issue>3</issue>):<fpage>565</fpage>&#x02013;<lpage>79</lpage>.<pub-id pub-id-type="doi">10.1016/j.clp.2010.05.006</pub-id><pub-id pub-id-type="pmid">20813271</pub-id></citation></ref>
<ref id="B170"><label>170</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Fanaro</surname> <given-names>S</given-names></name> <name><surname>Chierici</surname> <given-names>R</given-names></name> <name><surname>Guerrini</surname> <given-names>P</given-names></name> <name><surname>Vigi</surname> <given-names>V</given-names></name></person-group>. <article-title>Intestinal microflora in early infancy: composition and development</article-title>. <source>Acta Paediatr</source> (<year>2003</year>) <volume>91</volume>(<issue>441</issue>):<fpage>48</fpage>&#x02013;<lpage>55</lpage>.<pub-id pub-id-type="doi">10.1111/j.1651-2227.2003.tb00646.x</pub-id><pub-id pub-id-type="pmid">14599042</pub-id></citation></ref>
<ref id="B171"><label>171</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Kourtis</surname> <given-names>AP</given-names></name> <name><surname>Ibegbu</surname> <given-names>CC</given-names></name> <name><surname>Wiener</surname> <given-names>J</given-names></name> <name><surname>King</surname> <given-names>CC</given-names></name> <name><surname>Tegha</surname> <given-names>G</given-names></name> <name><surname>Kamwendo</surname> <given-names>D</given-names></name> <etal/></person-group> <article-title>Role of intestinal mucosal integrity in HIV transmission to infants through breast-feeding: the BAN study</article-title>. <source>J Infect Dis</source> (<year>2013</year>) <volume>208</volume>(<issue>4</issue>):<fpage>653</fpage>&#x02013;<lpage>61</lpage>.<pub-id pub-id-type="doi">10.1093/infdis/jit221</pub-id><pub-id pub-id-type="pmid">23687226</pub-id></citation></ref>
<ref id="B172"><label>172</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wallet</surname> <given-names>MA</given-names></name> <name><surname>Rodriguez</surname> <given-names>CA</given-names></name> <name><surname>Yin</surname> <given-names>L</given-names></name> <name><surname>Saporta</surname> <given-names>S</given-names></name> <name><surname>Chinratanapisit</surname> <given-names>S</given-names></name> <name><surname>Hou</surname> <given-names>W</given-names></name> <etal/></person-group> <article-title>Microbial translocation induces persistent macrophage activation unrelated to HIV-1 levels or T-cell activation following therapy</article-title>. <source>AIDS</source> (<year>2010</year>) <volume>24</volume>(<issue>9</issue>):<fpage>1281</fpage>&#x02013;<lpage>90</lpage>.<pub-id pub-id-type="doi">10.1097/QAD.0b013e328339e228</pub-id><pub-id pub-id-type="pmid">20559035</pub-id></citation></ref>
<ref id="B173"><label>173</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Papasavvas</surname> <given-names>E</given-names></name> <name><surname>Azzoni</surname> <given-names>L</given-names></name> <name><surname>Foulkes</surname> <given-names>A</given-names></name> <name><surname>Violari</surname> <given-names>A</given-names></name> <name><surname>Cotton</surname> <given-names>MF</given-names></name> <name><surname>Pistilli</surname> <given-names>M</given-names></name> <etal/></person-group> <article-title>Increased microbial translocation in &#x0003C;/&#x0003D; 180 days old perinatally human immunodeficiency virus-positive infants as compared with human immunodeficiency virus-exposed uninfected infants of similar age</article-title>. <source>Pediatr Infect Dis J</source> (<year>2011</year>) <volume>30</volume>(<issue>10</issue>):<fpage>877</fpage>&#x02013;<lpage>82</lpage>.<pub-id pub-id-type="doi">10.1097/INF.0b013e31821d141e</pub-id><pub-id pub-id-type="pmid">21552185</pub-id></citation></ref>
<ref id="B174"><label>174</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pilakka-Kanthikeel</surname> <given-names>S</given-names></name> <name><surname>Huang</surname> <given-names>S</given-names></name> <name><surname>Fenton</surname> <given-names>T</given-names></name> <name><surname>Borkowsky</surname> <given-names>W</given-names></name> <name><surname>Cunningham</surname> <given-names>CK</given-names></name> <name><surname>Pahwa</surname> <given-names>S</given-names></name></person-group>. <article-title>Increased gut microbial translocation in HIV-infected children persists in virologic responders and virologic failures after antiretroviral therapy</article-title>. <source>Pediatr Infect Dis J</source> (<year>2012</year>) <volume>31</volume>(<issue>6</issue>):<fpage>583</fpage>&#x02013;<lpage>91</lpage>.<pub-id pub-id-type="doi">10.1097/INF.0b013e31824da0f5</pub-id><pub-id pub-id-type="pmid">22333700</pub-id></citation></ref>
<ref id="B175"><label>175</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pilakka-Kanthikeel</surname> <given-names>S</given-names></name> <name><surname>Kris</surname> <given-names>A</given-names></name> <name><surname>Selvaraj</surname> <given-names>A</given-names></name> <name><surname>Swaminathan</surname> <given-names>S</given-names></name> <name><surname>Pahwa</surname> <given-names>S</given-names></name></person-group>. <article-title>Immune activation is associated with increased gut microbial translocation in treatment-naive, HIV-infected children in a resource-limited setting</article-title>. <source>J Acquir Immune Defic Syndr</source> (<year>2014</year>) <volume>66</volume>(<issue>1</issue>):<fpage>16</fpage>&#x02013;<lpage>24</lpage>.<pub-id pub-id-type="doi">10.1097/QAI.0000000000000096</pub-id><pub-id pub-id-type="pmid">24378729</pub-id></citation></ref>
<ref id="B176"><label>176</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Rerks-Ngarm</surname> <given-names>S</given-names></name> <name><surname>Pitisuttithum</surname> <given-names>P</given-names></name> <name><surname>Nitayaphan</surname> <given-names>S</given-names></name> <name><surname>Kaewkungwal</surname> <given-names>J</given-names></name> <name><surname>Chiu</surname> <given-names>J</given-names></name> <name><surname>Paris</surname> <given-names>R</given-names></name> <etal/></person-group> <article-title>Vaccination with ALVAC and AIDSVAX to prevent HIV-1 infection in Thailand</article-title>. <source>N Engl J Med</source> (<year>2009</year>) <volume>361</volume>(<issue>23</issue>):<fpage>2209</fpage>&#x02013;<lpage>20</lpage>.<pub-id pub-id-type="doi">10.1056/NEJMoa0908492</pub-id><pub-id pub-id-type="pmid">19843557</pub-id></citation></ref>
<ref id="B177"><label>177</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Haynes</surname> <given-names>BF</given-names></name> <name><surname>Gilbert</surname> <given-names>PB</given-names></name> <name><surname>McElrath</surname> <given-names>MJ</given-names></name> <name><surname>Zolla-Pazner</surname> <given-names>S</given-names></name> <name><surname>Tomaras</surname> <given-names>GD</given-names></name> <name><surname>Alam</surname> <given-names>SM</given-names></name> <etal/></person-group> <article-title>Immune-correlates analysis of an HIV-1 vaccine efficacy trial</article-title>. <source>N Engl J Med</source> (<year>2012</year>) <volume>366</volume>(<issue>14</issue>):<fpage>1275</fpage>&#x02013;<lpage>86</lpage>.<pub-id pub-id-type="doi">10.1056/NEJMoa1113425</pub-id><pub-id pub-id-type="pmid">22475592</pub-id></citation></ref>
<ref id="B178"><label>178</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Burton</surname> <given-names>DR</given-names></name></person-group>. <article-title>Antibodies, viruses and vaccines</article-title>. <source>Nat Rev Immunol</source> (<year>2002</year>) <volume>2</volume>(<issue>9</issue>):<fpage>706</fpage>&#x02013;<lpage>13</lpage>.<pub-id pub-id-type="doi">10.1038/nri891</pub-id></citation></ref>
<ref id="B179"><label>179</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Walker</surname> <given-names>BD</given-names></name> <name><surname>Burton</surname> <given-names>DR</given-names></name></person-group>. <article-title>Toward an AIDS vaccine</article-title>. <source>Science</source> (<year>2008</year>) <volume>320</volume>(<issue>5877</issue>):<fpage>760</fpage>&#x02013;<lpage>4</lpage>.<pub-id pub-id-type="doi">10.1126/science.1152622</pub-id></citation></ref>
<ref id="B180"><label>180</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Sather</surname> <given-names>DN</given-names></name> <name><surname>Armann</surname> <given-names>J</given-names></name> <name><surname>Ching</surname> <given-names>LK</given-names></name> <name><surname>Mavrantoni</surname> <given-names>A</given-names></name> <name><surname>Sellhorn</surname> <given-names>G</given-names></name> <name><surname>Caldwell</surname> <given-names>Z</given-names></name> <etal/></person-group> <article-title>Factors associated with the development of cross-reactive neutralizing antibodies during human immunodeficiency virus type 1 infection</article-title>. <source>J Virol</source> (<year>2009</year>) <volume>83</volume>(<issue>2</issue>):<fpage>757</fpage>&#x02013;<lpage>69</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.02036-08</pub-id><pub-id pub-id-type="pmid">18987148</pub-id></citation></ref>
<ref id="B181"><label>181</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Walker</surname> <given-names>LM</given-names></name> <name><surname>Huber</surname> <given-names>M</given-names></name> <name><surname>Doores</surname> <given-names>KJ</given-names></name> <name><surname>Falkowska</surname> <given-names>E</given-names></name> <name><surname>Pejchal</surname> <given-names>R</given-names></name> <name><surname>Julien</surname> <given-names>JP</given-names></name> <etal/></person-group> <article-title>Broad neutralization coverage of HIV by multiple highly potent antibodies</article-title>. <source>Nature</source> (<year>2011</year>) <volume>477</volume>(<issue>7365</issue>):<fpage>466</fpage>&#x02013;<lpage>70</lpage>.<pub-id pub-id-type="doi">10.1038/nature10373</pub-id><pub-id pub-id-type="pmid">21849977</pub-id></citation></ref>
<ref id="B182"><label>182</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Gray</surname> <given-names>ES</given-names></name> <name><surname>Madiga</surname> <given-names>MC</given-names></name> <name><surname>Hermanus</surname> <given-names>T</given-names></name> <name><surname>Moore</surname> <given-names>PL</given-names></name> <name><surname>Wibmer</surname> <given-names>CK</given-names></name> <name><surname>Tumba</surname> <given-names>NL</given-names></name> <etal/></person-group> <article-title>The neutralization breadth of HIV-1 develops incrementally over four years and is associated with CD4&#x0002B; T cell decline and high viral load during acute infection</article-title>. <source>J Virol</source> (<year>2011</year>) <volume>85</volume>(<issue>10</issue>):<fpage>4828</fpage>&#x02013;<lpage>40</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.00198-11</pub-id><pub-id pub-id-type="pmid">21389135</pub-id></citation></ref>
<ref id="B183"><label>183</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Wu</surname> <given-names>X</given-names></name> <name><surname>Yang</surname> <given-names>ZY</given-names></name> <name><surname>Li</surname> <given-names>Y</given-names></name> <name><surname>Hogerkorp</surname> <given-names>CM</given-names></name> <name><surname>Schief</surname> <given-names>WR</given-names></name> <name><surname>Seaman</surname> <given-names>MS</given-names></name> <etal/></person-group> <article-title>Rational design of envelope identifies broadly neutralizing human monoclonal antibodies to HIV-1</article-title>. <source>Science</source> (<year>2010</year>) <volume>329</volume>(<issue>5993</issue>):<fpage>856</fpage>&#x02013;<lpage>61</lpage>.<pub-id pub-id-type="doi">10.1126/science.1187659</pub-id><pub-id pub-id-type="pmid">20616233</pub-id></citation></ref>
<ref id="B184"><label>184</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Goo</surname> <given-names>L</given-names></name> <name><surname>Chohan</surname> <given-names>V</given-names></name> <name><surname>Nduati</surname> <given-names>R</given-names></name> <name><surname>Overbaugh</surname> <given-names>J</given-names></name></person-group>. <article-title>Early development of broadly neutralizing antibodies in HIV-1-infected infants</article-title>. <source>Nat Med</source> (<year>2014</year>) <volume>20</volume>(<issue>6</issue>):<fpage>655</fpage>&#x02013;<lpage>8</lpage>.<pub-id pub-id-type="doi">10.1038/nm.3565</pub-id><pub-id pub-id-type="pmid">24859529</pub-id></citation></ref>
<ref id="B185"><label>185</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Siegrist</surname> <given-names>CA</given-names></name></person-group>. <article-title>Neonatal and early life vaccinology</article-title>. <source>Vaccine</source> (<year>2001</year>) <volume>19</volume>(<issue>25&#x02013;26</issue>):<fpage>3331</fpage>&#x02013;<lpage>46</lpage>.<pub-id pub-id-type="doi">10.1016/S0264-410X(01)00028-7</pub-id></citation></ref>
<ref id="B186"><label>186</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Piantadosi</surname> <given-names>A</given-names></name> <name><surname>Panteleeff</surname> <given-names>D</given-names></name> <name><surname>Blish</surname> <given-names>CA</given-names></name> <name><surname>Baeten</surname> <given-names>JM</given-names></name> <name><surname>Jaoko</surname> <given-names>W</given-names></name> <name><surname>McClelland</surname> <given-names>RS</given-names></name> <etal/></person-group> <article-title>Breadth of neutralizing antibody response to human immunodeficiency virus type 1 is affected by factors early in infection but does not influence disease progression</article-title>. <source>J Virol</source> (<year>2009</year>) <volume>83</volume>(<issue>19</issue>):<fpage>10269</fpage>&#x02013;<lpage>74</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.01149-09</pub-id><pub-id pub-id-type="pmid">19640996</pub-id></citation></ref>
<ref id="B187"><label>187</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Scharf</surname> <given-names>O</given-names></name> <name><surname>Golding</surname> <given-names>H</given-names></name> <name><surname>King</surname> <given-names>LR</given-names></name> <name><surname>Eller</surname> <given-names>N</given-names></name> <name><surname>Frazier</surname> <given-names>D</given-names></name> <name><surname>Golding</surname> <given-names>B</given-names></name> <etal/></person-group> <article-title>Immunoglobulin G3 from polyclonal human immunodeficiency virus (HIV) immune globulin is more potent than other subclasses in neutralizing HIV type 1</article-title>. <source>J Virol</source> (<year>2001</year>) <volume>75</volume>(<issue>14</issue>):<fpage>6558</fpage>&#x02013;<lpage>65</lpage>.<pub-id pub-id-type="doi">10.1128/JVI.75.14.6558-6565.2001</pub-id><pub-id pub-id-type="pmid">11413323</pub-id></citation></ref>
<ref id="B188"><label>188</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Baba</surname> <given-names>TW</given-names></name> <name><surname>Liska</surname> <given-names>V</given-names></name> <name><surname>Hofmann-Lehmann</surname> <given-names>R</given-names></name> <name><surname>Vlasak</surname> <given-names>J</given-names></name> <name><surname>Xu</surname> <given-names>W</given-names></name> <name><surname>Ayehunie</surname> <given-names>S</given-names></name> <etal/></person-group> <article-title>Human neutralizing monoclonal antibodies of the IgG1 subtype protect against mucosal simian-human immunodeficiency virus infection</article-title>. <source>Nat Med</source> (<year>2000</year>) <volume>6</volume>(<issue>2</issue>):<fpage>200</fpage>&#x02013;<lpage>6</lpage>.<pub-id pub-id-type="doi">10.1038/72309</pub-id><pub-id pub-id-type="pmid">10655110</pub-id></citation></ref>
<ref id="B189"><label>189</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Lafeuillade</surname> <given-names>A</given-names></name></person-group>. <article-title>Eliminating the HIV reservoir</article-title>. <source>Curr HIV/AIDS Rep</source> (<year>2012</year>) <volume>9</volume>(<issue>2</issue>):<fpage>121</fpage>&#x02013;<lpage>31</lpage>.<pub-id pub-id-type="doi">10.1007/s11904-012-0115-y</pub-id></citation></ref>
<ref id="B190"><label>190</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Pace</surname> <given-names>MJ</given-names></name> <name><surname>Agosto</surname> <given-names>L</given-names></name> <name><surname>Graf</surname> <given-names>EH</given-names></name> <name><surname>O&#x02019;Doherty</surname> <given-names>U</given-names></name></person-group>. <article-title>HIV reservoirs and latency models</article-title>. <source>Virology</source> (<year>2011</year>) <volume>411</volume>(<issue>2</issue>):<fpage>344</fpage>&#x02013;<lpage>54</lpage>.<pub-id pub-id-type="doi">10.1016/j.virol.2010.12.041</pub-id><pub-id pub-id-type="pmid">21284992</pub-id></citation></ref>
<ref id="B191"><label>191</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chomont</surname> <given-names>N</given-names></name> <name><surname>El-Far</surname> <given-names>M</given-names></name> <name><surname>Ancuta</surname> <given-names>P</given-names></name> <name><surname>Trautmann</surname> <given-names>L</given-names></name> <name><surname>Procopio</surname> <given-names>FA</given-names></name> <name><surname>Yassine-Diab</surname> <given-names>B</given-names></name> <etal/></person-group> <article-title>HIV reservoir size and persistence are driven by T cell survival and homeostatic proliferation</article-title>. <source>Nat Med</source> (<year>2009</year>) <volume>15</volume>(<issue>8</issue>):<fpage>893</fpage>&#x02013;<lpage>900</lpage>.<pub-id pub-id-type="doi">10.1038/nm.1972</pub-id><pub-id pub-id-type="pmid">19543283</pub-id></citation></ref>
<ref id="B192"><label>192</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Persaud</surname> <given-names>D</given-names></name> <name><surname>Palumbo</surname> <given-names>PE</given-names></name> <name><surname>Ziemniak</surname> <given-names>C</given-names></name> <name><surname>Hughes</surname> <given-names>MD</given-names></name> <name><surname>Alvero</surname> <given-names>CG</given-names></name> <name><surname>Luzuriaga</surname> <given-names>K</given-names></name> <etal/></person-group> <article-title>Dynamics of the resting CD4(&#x0002B;) T-cell latent HIV reservoir in infants initiating HAART less than 6 months of age</article-title>. <source>AIDS</source> (<year>2012</year>) <volume>26</volume>(<issue>12</issue>):<fpage>1483</fpage>&#x02013;<lpage>90</lpage>.<pub-id pub-id-type="doi">10.1097/QAD.0b013e3283553638</pub-id><pub-id pub-id-type="pmid">22555165</pub-id></citation></ref>
<ref id="B193"><label>193</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ananworanich</surname> <given-names>J</given-names></name> <name><surname>Puthanakit</surname> <given-names>T</given-names></name> <name><surname>Suntarattiwong</surname> <given-names>P</given-names></name> <name><surname>Chokephaibulkit</surname> <given-names>K</given-names></name> <name><surname>Kerr</surname> <given-names>SJ</given-names></name> <name><surname>Fromentin</surname> <given-names>R</given-names></name> <etal/></person-group> <article-title>Reduced markers of HIV persistence and restricted HIV-specific immune responses after early antiretroviral therapy in children</article-title>. <source>AIDS</source> (<year>2014</year>) <volume>28</volume>(<issue>7</issue>):<fpage>1015</fpage>&#x02013;<lpage>20</lpage>.<pub-id pub-id-type="doi">10.1097/QAD.0000000000000178</pub-id><pub-id pub-id-type="pmid">24384692</pub-id></citation></ref>
<ref id="B194"><label>194</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Luzuriaga</surname> <given-names>K</given-names></name> <name><surname>Tabak</surname> <given-names>B</given-names></name> <name><surname>Garber</surname> <given-names>M</given-names></name> <name><surname>Chen</surname> <given-names>YH</given-names></name> <name><surname>Ziemniak</surname> <given-names>C</given-names></name> <name><surname>McManus</surname> <given-names>MM</given-names></name> <etal/></person-group> <article-title>Reduced HIV reservoirs after early treatment HIV-1 proviral reservoirs decay continuously under sustained virologic control in early-treated HIV-1-infected children</article-title>. <source>J Infect Dis</source> (<year>2014</year>).<pub-id pub-id-type="doi">10.1093/infdis/jiu297</pub-id><pub-id pub-id-type="pmid">24850788</pub-id></citation></ref>
<ref id="B195"><label>195</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Saez-Cirion</surname> <given-names>A</given-names></name> <name><surname>Bacchus</surname> <given-names>C</given-names></name> <name><surname>Hocqueloux</surname> <given-names>L</given-names></name> <name><surname>Avettand-Fenoel</surname> <given-names>V</given-names></name> <name><surname>Girault</surname> <given-names>I</given-names></name> <name><surname>Lecuroux</surname> <given-names>C</given-names></name> <etal/></person-group> <article-title>Post-treatment HIV-1 controllers with a long-term virological remission after the interruption of early initiated antiretroviral therapy ANRS VISCONTI Study</article-title>. <source>PLoS Pathog</source> (<year>2013</year>) <volume>9</volume>(<issue>3</issue>):<fpage>e1003211</fpage>.<pub-id pub-id-type="doi">10.1371/journal.ppat.1003211</pub-id><pub-id pub-id-type="pmid">23516360</pub-id></citation></ref>
<ref id="B196"><label>196</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Ho</surname> <given-names>YC</given-names></name> <name><surname>Shan</surname> <given-names>L</given-names></name> <name><surname>Hosmane</surname> <given-names>NN</given-names></name> <name><surname>Wang</surname> <given-names>J</given-names></name> <name><surname>Laskey</surname> <given-names>SB</given-names></name> <name><surname>Rosenbloom</surname> <given-names>DI</given-names></name> <etal/></person-group> <article-title>Replication-competent noninduced proviruses in the latent reservoir increase barrier to HIV-1 cure</article-title>. <source>Cell</source> (<year>2013</year>) <volume>155</volume>(<issue>3</issue>):<fpage>540</fpage>&#x02013;<lpage>51</lpage>.<pub-id pub-id-type="doi">10.1016/j.cell.2013.09.020</pub-id><pub-id pub-id-type="pmid">24243014</pub-id></citation></ref>
<ref id="B197"><label>197</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Siliciano</surname> <given-names>JD</given-names></name> <name><surname>Siliciano</surname> <given-names>RF</given-names></name></person-group>. <article-title>Enhanced culture assay for detection and quantitation of latently infected, resting CD4&#x0002B; T-cells carrying replication-competent virus in HIV-1-infected individuals</article-title>. <source>Methods Mol Biol</source> (<year>2005</year>) <volume>304</volume>:<fpage>3</fpage>&#x02013;<lpage>15</lpage>.<pub-id pub-id-type="doi">10.1385/1-59259-907-9:003</pub-id><pub-id pub-id-type="pmid">16061962</pub-id></citation></ref>
<ref id="B198"><label>198</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Laird</surname> <given-names>GM</given-names></name> <name><surname>Eisele</surname> <given-names>EE</given-names></name> <name><surname>Rabi</surname> <given-names>SA</given-names></name> <name><surname>Lai</surname> <given-names>J</given-names></name> <name><surname>Chioma</surname> <given-names>S</given-names></name> <name><surname>Blankson</surname> <given-names>JN</given-names></name> <etal/></person-group> <article-title>Rapid quantification of the latent reservoir for HIV-1 using a viral outgrowth assay</article-title>. <source>PLoS Pathog</source> (<year>2013</year>) <volume>9</volume>(<issue>5</issue>):<fpage>e1003398</fpage>.<pub-id pub-id-type="doi">10.1371/journal.ppat.1003398</pub-id><pub-id pub-id-type="pmid">23737751</pub-id></citation></ref>
<ref id="B199"><label>199</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Chun</surname> <given-names>TW</given-names></name> <name><surname>Nickle</surname> <given-names>DC</given-names></name> <name><surname>Justement</surname> <given-names>JS</given-names></name> <name><surname>Meyers</surname> <given-names>JH</given-names></name> <name><surname>Roby</surname> <given-names>G</given-names></name> <name><surname>Hallahan</surname> <given-names>CW</given-names></name> <etal/></person-group> <article-title>Persistence of HIV in gut-associated lymphoid tissue despite long-term antiretroviral therapy</article-title>. <source>J Infect Dis</source> (<year>2008</year>) <volume>197</volume>(<issue>5</issue>):<fpage>714</fpage>&#x02013;<lpage>20</lpage>.<pub-id pub-id-type="doi">10.1086/527324</pub-id><pub-id pub-id-type="pmid">18260759</pub-id></citation></ref>
<ref id="B200"><label>200</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Yukl</surname> <given-names>SA</given-names></name> <name><surname>Gianella</surname> <given-names>S</given-names></name> <name><surname>Sinclair</surname> <given-names>E</given-names></name> <name><surname>Epling</surname> <given-names>L</given-names></name> <name><surname>Li</surname> <given-names>Q</given-names></name> <name><surname>Duan</surname> <given-names>L</given-names></name> <etal/></person-group> <article-title>Differences in HIV burden and immune activation within the gut of HIV-positive patients receiving suppressive antiretroviral therapy</article-title>. <source>J Infect Dis</source> (<year>2010</year>) <volume>202</volume>(<issue>10</issue>):<fpage>1553</fpage>&#x02013;<lpage>61</lpage>.<pub-id pub-id-type="doi">10.1086/656722</pub-id><pub-id pub-id-type="pmid">20939732</pub-id></citation></ref>
<ref id="B201"><label>201</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Descours</surname> <given-names>B</given-names></name> <name><surname>Avettand-Fenoel</surname> <given-names>V</given-names></name> <name><surname>Blanc</surname> <given-names>C</given-names></name> <name><surname>Samri</surname> <given-names>A</given-names></name> <name><surname>Melard</surname> <given-names>A</given-names></name> <name><surname>Supervie</surname> <given-names>V</given-names></name> <etal/></person-group> <article-title>Immune responses driven by protective human leukocyte antigen alleles from long-term nonprogressors are associated with low HIV reservoir in central memory CD4 T cells</article-title>. <source>Clin Infect Dis</source> (<year>2012</year>) <volume>54</volume>(<issue>10</issue>):<fpage>1495</fpage>&#x02013;<lpage>503</lpage>.<pub-id pub-id-type="doi">10.1093/cid/cis188</pub-id><pub-id pub-id-type="pmid">22441653</pub-id></citation></ref>
<ref id="B202"><label>202</label><citation citation-type="journal"><person-group person-group-type="author"><name><surname>Shan</surname> <given-names>L</given-names></name> <name><surname>Deng</surname> <given-names>K</given-names></name> <name><surname>Shroff</surname> <given-names>NS</given-names></name> <name><surname>Durand</surname> <given-names>CM</given-names></name> <name><surname>Rabi</surname> <given-names>SA</given-names></name> <name><surname>Yang</surname> <given-names>HC</given-names></name> <etal/></person-group> <article-title>Stimulation of HIV-1-specific cytolytic T lymphocytes facilitates elimination of latent viral reservoir after virus reactivation</article-title>. <source>Immunity</source> (<year>2012</year>) <volume>36</volume>(<issue>3</issue>):<fpage>491</fpage>&#x02013;<lpage>501</lpage>.<pub-id pub-id-type="doi">10.1016/j.immuni.2012.01.014</pub-id><pub-id pub-id-type="pmid">22406268</pub-id></citation></ref>
</ref-list>
</back>
</article>
