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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Immunol.</journal-id>
<journal-title>Frontiers in Immunology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Immunol.</abbrev-journal-title>
<issn pub-type="epub">1664-3224</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fimmu.2021.745308</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Immunology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>PDGF Promotes Dermal Fibroblast Activation <italic>via</italic> a Novel Mechanism Mediated by Signaling Through MCHR1</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Takamura</surname>
<given-names>Naoko</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/918418"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Renaud</surname>
<given-names>Ludivine</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/848665"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>da Silveira</surname>
<given-names>Willian Abraham</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/918630"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Feghali-Bostwick</surname>
<given-names>Carol</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/507937"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Department of Medicine, Medical University of South Carolina</institution>, <addr-line>Charleston, SC</addr-line>, <country>United States</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Department of Biological Sciences, School of Life Sciences and Education, Staffordshire University</institution>, <addr-line>Stoke-on-Trent</addr-line>, <country>United Kingdom</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Agnieszka Paradowska-Gorycka, National Institute of Geriatrics, Rheumatology and Rehabilitation, Poland</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Pei-Suen Eliza Tsou, University of Michigan, United States; Jenn-Haung Lai, Linkou Chang Gung Memorial Hospital, Taiwan; Steven O&#x2019;Reilly, STipe Therapeutics, Denmark</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Carol Feghali-Bostwick, <email xlink:href="mailto:feghalib@musc.edu">feghalib@musc.edu</email>
</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Autoimmune and Autoinflammatory Disorders, a section of the journal Frontiers in Immunology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>29</day>
<month>11</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>12</volume>
<elocation-id>745308</elocation-id>
<history>
<date date-type="received">
<day>21</day>
<month>07</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>11</day>
<month>10</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2021 Takamura, Renaud, da Silveira and Feghali-Bostwick</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Takamura, Renaud, da Silveira and Feghali-Bostwick</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Systemic sclerosis (SSc) is an autoimmune disease characterized by vasculopathy and excessive fibrosis of the skin and internal organs. To this day, no effective treatments to prevent the progression of fibrosis exist, and SSc patients have disabilities and reduced life expectancy. The need to better understand pathways that drive SSc and to find therapeutic targets is urgent. RNA sequencing data from SSc dermal fibroblasts suggested that melanin-concentrating hormone receptor 1 (MCHR1), one of the G protein-coupled receptors regulating emotion and energy metabolism, is abnormally deregulated in SSc. Platelet-derived growth factor (PDGF)-BB stimulation upregulated MCHR1 mRNA and protein levels in normal human dermal fibroblasts (NHDF), and MCHR1 silencing prevented the PDGF-BB-induced expression of the profibrotic factors transforming growth factor beta 1 (TGF&#x3b2;1) and connective tissue growth factor (CTGF). PDGF-BB bound MCHR1 in membrane fractions of NHDF, and the binding was confirmed using surface plasmon resonance (SPR). MCHR1 inhibition blocked PDGF-BB modulation of intracellular cyclic adenosine monophosphate (cAMP). MCHR1 silencing in NHDF reduced PDGF-BB signaling. In summary, MCHR1 promoted the fibrotic response in NHDF through modulation of TGF&#x3b2;1 and CTGF production, intracellular cAMP levels, and PDGF-BB-induced signaling pathways, suggesting that MCHR1 plays an important role in mediating the response to PDGF-BB and in the pathogenesis of SSc. Inhibition of MCHR1 should be considered as a novel therapeutic strategy in SSc-associated fibrosis.</p>
</abstract>
<kwd-group>
<kwd>scleroderma</kwd>
<kwd>systemic sclerosis</kwd>
<kwd>skin fibrosis</kwd>
<kwd>MCHR1</kwd>
<kwd>PDGF</kwd>
<kwd>fibroblast</kwd>
</kwd-group>
<contract-num rid="cn001">K24AR060297, AR050958</contract-num>
<contract-sponsor id="cn001">National Institute of Arthritis and Musculoskeletal and Skin Diseases<named-content content-type="fundref-id">10.13039/100000069</named-content>
</contract-sponsor>
<counts>
<fig-count count="6"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="72"/>
<page-count count="16"/>
<word-count count="8246"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>1 Introduction</title>
<p>Systemic sclerosis (SSc) is an autoimmune disease characterized by vasculopathy and excessive fibrosis of the skin and internal organs (<xref ref-type="bibr" rid="B1">1</xref>). Skin fibrosis is the most common finding in SSc patients and can be associated with fibrosis of internal organs, which results in high mortality (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B3">3</xref>). Fibroblasts are considered the effector cells in fibrosis (<xref ref-type="bibr" rid="B4">4</xref>). Several growth factors, such as transforming growth factor beta (TGF&#x3b2;) (<xref ref-type="bibr" rid="B5">5</xref>), connective tissue growth factor (CTGF) (<xref ref-type="bibr" rid="B6">6</xref>) and platelet-derived growth factor (PDGF), can activate the profibrotic response of fibroblasts and thus contribute to the pathogenesis of SSc (<xref ref-type="bibr" rid="B7">7</xref>). Currently, no effective therapies exist that can halt fibrosis or reverse it (<xref ref-type="bibr" rid="B3">3</xref>).</p>
<p>Melanin-Concentrating Hormone Receptor 1 (MCHR1) is a G protein-coupled receptor (GPCR), identified first as a receptor for melanin-concentrating hormone (MCH) in 1999 (<xref ref-type="bibr" rid="B8">8</xref>). MCH is a cyclic neuropeptide originally isolated from the salmon pituitary that mediates skin color changes due to environmental conditions (<xref ref-type="bibr" rid="B9">9</xref>). MCH and MCHR1 are mainly expressed in the central nervous system (<xref ref-type="bibr" rid="B10">10</xref>, <xref ref-type="bibr" rid="B11">11</xref>), but are also expressed in peripheral tissues, including human immune cells (<xref ref-type="bibr" rid="B12">12</xref>), human skin melanocytes (<xref ref-type="bibr" rid="B13">13</xref>), and human intestinal myofibroblasts (<xref ref-type="bibr" rid="B14">14</xref>). Some reports indicate that this pathway could modulate the immune system (<xref ref-type="bibr" rid="B12">12</xref>), inflammatory responses (<xref ref-type="bibr" rid="B15">15</xref>), and melanocyte function (<xref ref-type="bibr" rid="B13">13</xref>). The contribution of MCHR1 to fibrotic responses is demonstrated in patients with inflammatory bowel disease (<xref ref-type="bibr" rid="B14">14</xref>), and severe hepatic steatosis in mice (<xref ref-type="bibr" rid="B16">16</xref>). Aberrant MCHR1 expression is reported in lung tissues of patients with idiopathic pulmonary fibrosis, which has clinical and pathogenic features that overlap with SSc-associated interstitial lung disease (<xref ref-type="bibr" rid="B17">17</xref>). On the basis of these findings, we examined the levels of MCHR1 in SSc dermal fibroblasts. Based on the RNA sequencing data of these fibroblasts (Malaab et al., in press), we identified MCHR1 as a hub gene in our network analysis. Our goal was to elucidate the role of MCHR1 signaling in dermal fibroblast activation.</p>
</sec>
<sec id="s2" sec-type="materials|methods">
<title>2 Materials and Methods</title>
<sec id="s2_1">
<title>2.1 Primary Human Dermal Fibroblast Culture</title>
<p>Primary human dermal fibroblasts were cultured from skin tissues of patients with SSc or healthy donors as previously described (<xref ref-type="bibr" rid="B18">18</xref>), under a protocol approved by the Institutional Review Board (IRB) of the University of Pittsburgh. Informed consent was obtained from all participants. Clinical features of the patients included in this study are shown in <xref ref-type="supplementary-material" rid="SM2">
<bold>Supplementary Table&#xa0;1</bold>
</xref>. For healthy donors, skin samples were obtained without identifiers and deemed as non-human subject research by the IRB of the Medical University of South Carolina. All research included in this manuscript conforms with the Declaration of Helsinki. Fibroblasts were maintained in Dulbecco&#x2019;s Modified Eagle&#x2019;s Medium (DMEM) (Mediatech, Herndon, VA, USA) supplemented with 10% fetal bovine serum (Sigma-Aldrich, St. Louis, MO, USA), penicillin, streptomycin, and antimycotic agent (Invitrogen, Carlsbad, CA, USA) and used in passages 3 to 8.</p>
<p>Primary normal human dermal fibroblasts (NHDF) from healthy donors were treated with the following reagents; PDGF-BB (40 ng/mL) (R&amp;D Systems, Minneapolis, MN, USA), MCH (100nM) (TOCRIS, Minneapolis, MN, USA), PI3K inhibitor (LY294002, 10&#x3bc;M), MEK inhibitor (U0126, 10&#x3bc;M), STAT3 inhibitor (StatticV, 5&#x3bc;M), TGF&#x3b2; receptor inhibitor (ALK4/5/7 inhibitor, SB431542, 10&#x3bc;M), PDGF receptor inhibitor (CP-673451, 100nM), MCHR1 inhibitor (ATC0065, 50nM), dimethyl sulfoxide (DMSO) or Ethanol as a vehicle control, and used for immunoblotting, PCR and ELISA analyses as appropriate. Inhibitors were used at the indicated concentrations based on previous reports (<xref ref-type="bibr" rid="B19">19</xref>&#x2013;<xref ref-type="bibr" rid="B25">25</xref>). Cell viability was determined with Cell Counting Kit-8 (Dojindo, Rockville, MD, USA) assay as previously described (<xref ref-type="bibr" rid="B26">26</xref>). Detailed information about the reagents is shown in <xref ref-type="supplementary-material" rid="SM2">
<bold>Supplementary Table&#xa0;2</bold>
</xref>.</p>
</sec>
<sec id="s2_2">
<title>2.2 RNA Sequencing</title>
<p>Total RNA was extracted from each dermal fibroblast cell strain in passage 3 for gene expression analysis using the CsCl-gradient purification method (<xref ref-type="bibr" rid="B18">18</xref>). RNA integrity (RINs &#x2265; 8) was verified using Agilent 2200 TapeStation (Agilent Technologies, Palo Alto, CA). RNAseq libraries were prepared for all dermal fibroblast samples using the TruSeq RNA Sample Prep Kit following the manufacturer&#x2019;s protocol (Illumina, San Diego, CA) at the Hollings Cancer Center Genomics Core at MUSC (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure&#xa0;1A</bold>
</xref>). Libraries were clustered at a concentration to ensure at least 100 million reads per sample on the cBot as described by the manufacturer (Illumina, San Diego, CA). Clustered RNAseq libraries were paired-end sequenced using version 4 with 2&#xd7;125 cycles on an Illumina HiSeq2500. Demultiplexing was performed utilizing bcl2fastq-1.8.4 to generate Fastq files.</p>
<p>A second paired-end RNAseq analysis for MCHR1 silenced NHDF and controls treated with/without PDGF-BB was performed at Novogene (Sacramento, CA, USA) with the NEBNext Ultra TM RNA library prep kit (New England Biolabs, MA, USA) on the Illumina NovaSeq 6000 instrument (Illumina) (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure&#xa0;1B</bold>
</xref>).</p>
</sec>
<sec id="s2_3">
<title>2.3 Differential Expression Analysis</title>
<sec id="s2_3_1">
<title>2.3.1 Gene Level Analysis</title>
<p>Gene level analyses were completed using the OnRamp BioInformatics Genomic Research Platform (OnRamp Bioinformatics, San Diego, CA) (<xref ref-type="bibr" rid="B27">27</xref>) and the Novogene pipeline. Briefly, Fastq files quality control was performed by FastQC, adapters were trimmed and filtered by CutAdapt, and alignment to the hg19 human genome was done by STAR RNAseq aligner. Gene-level count data were generated by HTSeq and FeatureCounts, and Batch-corrected by ComBat-seq (<xref ref-type="bibr" rid="B28">28</xref>). Differential expression analysis was carried out by DESeq2 (<xref ref-type="bibr" rid="B29">29</xref>), using R studio version 1.2.1335 2009-2019. For each gene, DESeq2 reported estimated log2 fold change (log2FC) and provided a false discovery rate (FDR) adjusted p-value (q-value). Transcript count data were sorted according to their q-value. FDR is the expected fraction of false positive tests among significant tests and was calculated using the Benjamini-Hochberg multiple testing adjustment procedure. Differentially expressed (DE) genes were defined by q-value &lt; 0.1.</p>
</sec>
<sec id="s2_3_2">
<title>2.3.2 Systems Level Analysis</title>
<p>Systems level analysis was performed using iPathwayGuide (Advaita Bioinformatics, Ann Arbor, MI), a tool that uses a systems biology approach to identify pathways that are significantly impacted in any condition from high-throughput gene expression data (<xref ref-type="bibr" rid="B30">30</xref>). The impact analysis incorporates the classical probabilistic component of the magnitude of the expression changes of each gene, the position of the DE genes on the given pathways, the topology of the pathway that describes how these genes interact, and the type of signaling interactions between them. Gene Ontology (GO) terms with a <italic>p</italic>-value &lt; 0.05 were considered to be significantly perturbed. Network analysis was used to identify the hub gene; genes with the largest number of incoming edges are found in the center, and those with the fewest are at the periphery.</p>
</sec>
</sec>
<sec id="s2_4">
<title>2.4 Quantitative Polymerase Chain Reaction</title>
<p>Total RNA was extracted using TRIzol (Life Tchnologies), and qPCR was performed in duplicate using TaqMan<sup>&#xae;</sup> gene expression assays using StepOne Plus Real-time PCR machine (Applied Biosystems, Carlsbad, CA), using the following protocol; A. Holding stage: 1) 15 mins at 48&#xb0;C 2) 10 mins at 95&#xb0;C. B. Cycling Stage: 1) 1 min at 95&#xb0;C 2) 1 min at 60&#xb0;C for a total of 40 cycles. Gene expression levels were normalized to <italic>Beta 2 Microglobulin (B2M)</italic> and compared using the 2&#x2212;&#x394;&#x394;Ct method. TaqMan<sup>&#xae;</sup> probes for human <italic>Actin Alpha 2 (ACTA2), Collagen Type I Alpha 1 (Col1&#x3b1;1), CTGF, Fibronectin 1 (FN1), TGF&#x3b2;1, MCHR1, and B2M</italic> were obtained from Applied Biosystems. The assay catalog numbers are shown in <xref ref-type="supplementary-material" rid="SM2">
<bold>Supplementary Table&#xa0;3</bold>
</xref>.</p>
</sec>
<sec id="s2_5">
<title>2.5 Immunoblotting</title>
<p>Fibroblast lysates were harvested directly in 2&#xd7; sodium dodecyl sulfate gel-loading buffer (100 mmol/L Tris-Cl, pH 6.8, 200 mmol/L mercaptoethanol, 4% sodium dodecyl sulfate, 0.2% bromophenol blue, 20% glycerol). Samples were separated by 10% sodium dodecyl sulfate polyacrylamide gel electrophoresis and transferred onto nitrocellulose blotting membranes (GE Healthcare Life science). Membranes were then blocked with 5% milk and incubated with one of the following antibodies; MCHR1, Alpha Smooth Muscle Actin (&#x3b1;SMA), Fibronectin (FN), CTGF, Collagen Type I Alpha 1 (Col1A1), TGF&#x3b2;1, Caspase 3, and Glyceraldehyde-3-Phosphate Dehydrogenase (GAPDH). Product details are shown in <xref ref-type="supplementary-material" rid="SM2">
<bold>Supplementary Table&#xa0;2</bold>
</xref>. Signals were detected using horseradish peroxidase-conjugated secondary antibody and chemiluminescence (Perkin-Elmer, Waltham, MA, USA) on an iBright750 (Thermo Fisher Scientific). Signals were quantified using ImageJ software (designed at the National Institutes of Health) for densitometry (<xref ref-type="bibr" rid="B31">31</xref>, <xref ref-type="bibr" rid="B32">32</xref>).</p>
</sec>
<sec id="s2_6">
<title>2.6 Western Ligand Blotting</title>
<p>Western ligand blotting was performed as previously described (<xref ref-type="bibr" rid="B33">33</xref>) with some modifications. Briefly, 1 &#xd7; 10<sup>6</sup> NHDF were cultured and collected using the Subcellular Protein Fractionation Kit (Thermo Fisher Scientific), then membrane fraction samples were electrophoresed under non-reducing conditions and transferred to a nitrocellulose membrane. Similarly, recombinant human MCHR1 (Abnova, Taipei City, Taiwan) was electrophoresed under non-reducing conditions and transferred to a nitrocellulose membrane. The membrane was blocked with 5% nonfat milk in Tris-buffered saline/5% Tween-20 and incubated for 1 hour with biotinylated PDGF-BB (R&amp;D). The membrane was washed and incubated for 1 hour with horseradish peroxidase-conjugated streptavidin (Invitrogen), and the signal was detected using chemiluminescence (Perkin-Elmer) on an iBright750 (Thermo Fisher Scientific).</p>
</sec>
<sec id="s2_7">
<title>2.7 MCHR1 Silencing</title>
<p>NHDF were seeded in a 6-well plate at a density of 1 &#xd7; 10<sup>5</sup> cells/well in DMEM supplemented with 10% fetal bovine serum. MCHR1-specific small-interfering RNA (ON-TARGET plus) and control RNAi were purchased from Dharmacon (Lafayette, CO, USA). For transfection, Lipofectamine<sup>&#xae;</sup>2000 (Invitrogen) was used in accordance with the manufacturer&#x2019;s instructions. A mixture of 10 or 100 nM of each RNAi and Lipofectamine<sup>&#xae;</sup>2000 was added to cells, and cells were cultured for 72 h. Fibroblasts were serum-starved at least 2 h before further stimulation. MCHR1-silenced or control siRNA fibroblasts were treated with 40 ng/mL PDGF-BB (R&amp;D) and harvested 6hrs or 24hrs after stimulation. The culture supernatants were collected by centrifugation and aliquoted. All samples were stored at - 80&#xb0;C until further analysis.</p>
</sec>
<sec id="s2_8">
<title>2.8 Surface Plasmon Resonance (SPR) Assay</title>
<p>All experiments were done at the Biacore Molecular Interaction Shared Resource at Georgetown University using a Biacore T200 instrument (Cytiva, Marlborough, MA, USA) with a sensor chip CM5 (Cytiva) at 25&#xb0;C. Recombinant human MCHR1 Protein (Abnova) was used as a ligand to capture onto the CM5 chip, using standard amine coupling chemistry. Recombinant human PDGF-BB (Sigma-Aldrich) was used as an analyte to flow over the ligand captured surface. Flow Cell (FC) 1 was used as the reference for FC2. Recombinant human MCHR1 was diluted (1:25 dilution, ~1.2 &#xb5;g/ml diluted concentration) in 10 mM sodium acetate buffer at pH 4.0 and immobilized onto FC2 to a level of ~5500 RU. PBS-P (20 mM Phosphate buffer pH 7.4, 137 mM NaCl, 2.7 mM KCl, 0.05% v/v surfactant P20) was used as the immobilization running buffer. Based on the Immobilized response value, theoretical R<sub>max</sub> values were calculated. The R<sub>max</sub> values assume 1:1 interaction mechanism. Overnight kinetics for PDGF-BB binding to MCHR1 were performed in the presence of PBS-P. The contact and dissociation times were 60 s and 300 s, respectively. The flow rates of all analytes solutions were maintained at 50 &#xb5;L/min. Two 20 s pulses of 1:1000 H<sub>3</sub>PO<sub>4</sub> (H<sub>3</sub>PO<sub>4</sub>:ddH<sub>2</sub>O, v/v) were injected for surface regeneration. Injected analyte concentrations were from 100 nM to 3.125 nM (two-fold dilutions). Analytes were injected in duplicate. For analysis, sensorgrams from the overnight kinetics were evaluated using 1:1 kinetics model fitting.</p>
</sec>
<sec id="s2_9">
<title>2.9 Measurement of cAMP Production</title>
<p>NHDF were plated in 6 well plate at a density of 1 &#xd7; 10<sup>5</sup> cells/well and cultured overnight. Cells were washed twice with HBSS and pre-treated with 50nM ATC0065 for 1 hour, followed by addition of PDGF-BB, MCH, or vehicle control for 30min. Fibroblasts were harvested with 0.1M HCL and centrifuged at 1000g for 10 min, and supernatants were used to measure cyclic adenosine monophosphate (cAMP) levels. The levels of cAMP in fibroblasts were measured in duplicate samples using Cyclic AMP ELISA kits (Cayman chemical, Ann Arbor, Michigan, USA) according to the manufacturer&#x2019;s instructions. The absorbance at 410 nm was measured with a SYNERGY H1 microplate reader (Biotec, Winooski, VT, USA).</p>
</sec>
<sec id="s2_10">
<title>2.10 Cell Proliferation Assay</title>
<p>Cell proliferation was measured by using the Cell Counting Kit-8 (Dojindo, Rockville, MD, USA). NHDF were seeded in a 96-well plate at a density of 5 &#xd7; 10<sup>3</sup> cells/well in 100 &#xb5;l culture medium and were allowed to adhere overnight. Cells were treated with 40ng/ml PDGF-BB or 10<sup>-7</sup>M MCH or vehicle control with or without 50nM ATC0065, then incubated for 24, 48, or 72 hrs. 10&#x3bc;l of Cell Counting Kit-8 reagent was added to each well 2 hrs prior to measurement of absorbance. The absorbance at 450 nm was measured with a SYNERGY H1 microplate reader (Biotec).</p>
</sec>
<sec id="s2_11">
<title>2.11 Statistical Analysis</title>
<p>In addition to the described differential expression analysis, statistical comparisons were performed using Mann-Whitney U test, unpaired Student&#x2019;s t-test, multiple t-test, one-way analysis of variance (ANOVA) (posthoc Tukey or Dunnett), or two-way analysis of variance (post-hoc Sidak) as indicated. All tests were carried out using GraphPad Prism version 8.0 software (GraphPad Software, San Diego, CA). A <italic>P</italic> value &lt;0.05 was considered significant.</p>
</sec>
</sec>
<sec id="s3" sec-type="results">
<title>3 Results</title>
<sec id="s3_1">
<title>3.1 Network Analysis Revealed MCHR1 as a Hub Gene</title>
<p>To identify potential genes involved in the pathogenesis of skin fibrosis in SSc, we performed RNA sequencing (RNAseq) using dermal fibroblasts from twins discordant for SSc and healthy subjects. We identified 742 DE genes in dermal SSc fibroblasts (q &lt; 0.1, log2FC &lt; |0.6|). We determined that <italic>MCHR1</italic> was a hub gene significantly upregulated in our network analysis (<xref ref-type="supplementary-material" rid="SM2">
<bold>Supplementary Table&#xa0;4</bold>
</xref> <bold>and</bold> <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure&#xa0;2</bold>
</xref>), suggesting MCHR1 might play a pivotal role in the pathogenesis of SSc based on the &#x201c;centrality principle&#x201d; stating that highly connected vertices are often functionally important in biological systems (<xref ref-type="bibr" rid="B34">34</xref>). Thus, we focused our study on MCHR1.</p>
</sec>
<sec id="s3_2">
<title>3.2 MCHR1 Expression Is Upregulated in SSc Dermal Fibroblasts and Induced by PDGF-BB</title>
<p>To confirm the upregulation of MCHR1 in SSc patients, we examined <italic>MCHR1</italic> mRNA levels in dermal fibroblasts from SSc patients with early disease compared to fibroblasts from healthy subjects using quantitative PCR (qPCR). <italic>MCHR1</italic> expression was significantly higher in the dermal fibroblasts of SSc patients (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1A</bold>
</xref>). To determine which growth factors may increase MCHR1, we examined the effects of several fibrosis-promoting factors on <italic>MCHR1</italic> expression levels in NHDF, including TGF&#x3b2;1, interleukin 6 (IL-6), bleomycin (BLM), and PDGF-BB. PDGF-BB and BLM significantly increased <italic>MCHR1</italic> levels, while TGF&#x3b2;1 decreased its expression, albeit not significantly (p = 0.0586) (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1B</bold>
</xref>). A time-course experiment showed that PDGF-BB induced an increase in <italic>MCHR1</italic> expression levels as early as 2 hrs post-treatment, and the difference reached significance after 24 hrs (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1C</bold>
</xref>). After 96 hrs of stimulation, <italic>MCHR1</italic> levels returned to basal levels. In parallel, MCHR1 protein abundance was increased in NHDF stimulated with PDGF-BB for 48 and 72 hrs (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1D</bold>
</xref>).</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>MCHR1 expression in dermal fibroblasts. <bold>(A)</bold> MCHR1 expression in dermal fibroblasts of SSc patients (SSc) and healthy subjects (Healthy) was measured using qPCR (n = 8). <bold>(B)</bold> MCHR1 expression in NHDF treated with TGF&#x3b2;1 (5ng/ml), interleukin 6 (IL-6, 20 ng/mL), PDGF-BB (PDGF, 40 ng/mL), bleomycin(BLM, 10 mU/mL), or vehicle control (VC) for 24 hrs (n=3). <bold>(C)</bold> MCHR1 expression levels in NHDF treated with PDGF-BB (40ng/ml) compared to vehicle control at the indicated time points (n=3). <bold>(D)</bold> Quantification of MCHR1 protein abundance relative to glyceraldehyde 3-phosphate dehydrogenase (GAPDH) in PDGF-BB-treated NHDF (40 ng/mL) for 48 and 72 hrs (n=7). Representative immunoblots are shown. <bold>(E)</bold> MCHR1 expression levels in NHDF incubated with 10 &#x3bc;M of the following inhibitors: LY294002 (PI3K), U0126 (MEK), 5 &#x3bc;M of StatticV (STAT3), DMSO as a vehicle control (n=5). PDGF-BB (40 ng/mL) was added 1 hour after inhibitors. NHDF were treated with PDGF-BB for 24 hrs. <bold>(F)</bold> Quantification of MCHR1 protein abundance relative to GAPDH in PDGF-BB-treated NHDF (40 ng/mL) for 48hrs in combination with inhibitors PI3K, MEK, STAT3 and DMSO as vehicle control (n=7). Representative immunoblots are shown below. *P &lt; 0.05, **P &lt; 0.01, error bars = SEM.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-12-745308-g001.tif"/>
</fig>
</sec>
<sec id="s3_3">
<title>3.3 PI3K and MEK Activation Mediates the PDGF-BB Induction of MCHR1</title>
<p>To determine which PDGF signaling cascades mediate the induction of MCHR1, NHDF were cultured with PDGF-BB in combination with specific inhibitors of PI3K (LY294002), MEK (U0126), and STAT3 (Stat3 inhibitor V, static) signaling. Inhibition of the PI3K and MEK signaling pathways significantly reduced the PDGF-BB-induced increase in <italic>MCHR1</italic> mRNA and protein levels (<xref ref-type="fig" rid="f1">
<bold>Figures&#xa0;1E, F</bold>
</xref>), suggesting that these two pathways mediate PDGF-BB induction of MCHR1. We also confirmed that the inhibitors had no off-target effect on MCHR1 levels (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure&#xa0;3</bold>
</xref>).</p>
</sec>
<sec id="s3_4">
<title>3.4 PDGF-BB Induces the Expression of Fibrotic Genes</title>
<p>To further delineate the role of PDGF-BB in fibrosis, we investigated whether PDGF-BB induces fibrotic gene expression in NHDF. PDGF-BB significantly increased the expression levels of <italic>Col1&#x3b1;1</italic> at 6 hrs and 24 hrs, <italic>CTGF</italic> at 4 and 6 hrs, and <italic>TGF&#x3b2;1</italic> at 6 and 24 hrs (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2A</bold>
</xref>). Immunoblotting showed that 48 hrs of PDGF-BB stimulation significantly increased the protein abundance of Col1A1, FN1, CTGF, and TGF&#x3b2;1 in NHDF (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2B</bold>
</xref>). Additionally, PDGF-BB increased the expression levels of the myofibroblast marker <italic>ACTA2</italic> (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2A</bold>
</xref>) and its corresponding protein &#x3b1;SMA (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2B</bold>
</xref>), although the increase was not statistically significant. Together, our data showed that PDGF-BB can induce fibrotic mediators and ECM deposition in NHDF.</p>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>Effect of PDGF-BB on fibrotic genes in NHDF. <bold>(A)</bold> The expression levels of fibrotic genes in NHDF treated with PDGF-BB compared to vehicle control at the indicated time points (n=3). <bold>(B)</bold> Quantification of Col1A1, FN1, CTGF, &#x3b1;SMA and TGF&#x3b2;1 protein abundance relative to GAPDH in PDGF-BB-treated NHDF (PDGF, 40 ng/mL) for 48 hrs (n=8). Representative immunoblots are shown. <bold>(C)</bold> Quantification of Col1A1, FN1, CTGF, &#x3b1;SMA, TGF&#x3b2;1 and MCHR1 protein abundance relative to GAPDH in NHDF treated with PDGF-BB and PDGF receptor inhibitor (CP-673451) (n=3). Representative immunoblots are shown. NHDF were treated with 10 nM of CP-673451 1 hr prior to PDGF-BB (40ng/ml for 48 hrs). Ethanol was used as vehicle control. *P &lt; 0.05, **P &lt; 0.01, ***P &lt; 0.001, ns, not significant, error bars = SEM.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-12-745308-g002.tif"/>
</fig>
</sec>
<sec id="s3_5">
<title>3.5 PDGF-BB Increases MCHR1 and Fibrotic Genes Through PDGF Receptor</title>
<p>To determine if the fibrotic responses elicited by PDGF-BB were induced through PDGF receptor signaling, NHDF were pre-incubated with PDGF receptor inhibitor CP-673451, and treated with PDGF-BB. PDGF-BB induced MCHR1 and TGF&#x3b2;1 protein abundance, and this effect was significantly attenuated by PDGF receptor inhibition (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2C</bold>
</xref>). PDGF-BB-induced FN1 and CTGF, but not Col1A1, were also reduced by PDGF receptor inhibition, albeit not significantly (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2C</bold>
</xref>).</p>
</sec>
<sec id="s3_6">
<title>3.6 PDGF-BB Increases CTGF and TGF&#x3b2;1 Independently of TGF&#x3b2; Receptor Signaling</title>
<p>TGF&#x3b2;1 is the prototype fibrotic factor that increases the expression of several profibrotic genes in fibroblasts (<xref ref-type="bibr" rid="B35">35</xref>). Since PDGF-BB increased TGF&#x3b2;1 abundance (<xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2B</bold>
</xref>), we sought to determine if the induction of fibrotic genes by PDGF-BB is mediated by TGF&#x3b2;1. NHDF were pre-incubated with the ALK5 inhibitor, an inhibitor of TGF&#x3b2; receptor signaling. PDGF-BB-induced Col1A1 and FN1 protein levels were significantly decreased by ALK5 inhibitor (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure&#xa0;4</bold>
</xref>), suggesting that PDGF-BB-induced upregulation of Col1A1 and FN1 is dependent on PDGF-BB activation of TGF&#x3b2; receptor. PDGF-BB-induced CTGF and TGF&#x3b2;1 levels were modestly reduced by ALK5 inhibition, albeit not significantly. ALK5 inhibition did not affect PDGF-BB regulation of &#x3b1;SMA. Together these results show that PDGF-BB induces the profibrotic factors CTGF and TGF&#x3b2;1 independently of TGF&#x3b2;1 receptor signaling, while the induction of Col1A1 and FN1 by PDGF-BB is due to activation of TGF&#x3b2;1 signaling.</p>
</sec>
<sec id="s3_7">
<title>3.7 PDGF-BB Induces CTGF and TGF&#x3b2;1 Through MCHR1</title>
<p>Since PDGF-BB induction of CTGF and TGF&#x3b2;1 was independent of TGF&#x3b2; receptor signaling, we sought to determine if this response is mediated by MCHR1. <italic>MCHR1</italic> expression in NHDF was silenced using small-interfering RNA prior to stimulation with PDGF-BB (see transfection efficacy in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure&#xa0;5</bold>
</xref>). <italic>MCHR1</italic> silencing alone did not affect the expression levels of profibrotic genes, but PDGF-BB-induced <italic>CTGF</italic> and <italic>TGF&#x3b2;1</italic> gene expression levels were significantly decreased by <italic>MCHR1</italic> silencing (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3A</bold>
</xref>). In conditioned media of cells treated with PDGF-BB, the protein abundance of TGF&#x3b2;1 and CTGF were increased compared to vehicle-treated cells, and <italic>MCHR1</italic> silencing significantly prevented this increase (<xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3B</bold>
</xref>). We also examined the role of MCHR1 in SSc dermal fibroblasts. Our data show that <italic>MCHR1</italic> silencing only reduced PDGF-BB induction of TGF&#x3b2;1 (<xref ref-type="fig" rid="f3">
<bold>Figures&#xa0;3C, D</bold>
</xref>). Interestingly, CTGF was not induced by PDGF-BB in SSc dermal fibroblasts at the time point examined.</p>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>Effect of MCHR1 silencing (siMCHR1) on fibrotic expression levels in NHDF and SSc dermal fibroblasts. NHDF were transfected with siMCHR1 for 72 hrs then stimulated with PDGF-BB (40ng/ml) for 6 hrs (n=6) and 24 hrs (n=9). SSc dermal fibroblasts were transfected with siMCHR1 for 48 hrs then stimulated with PDGFBB (40ng/ml) for 6 hrs (n=6) and 24 hrs (n=6). Transfection efficacy is shown in <xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure 5</bold>
</xref>. <bold>(A)</bold> Effects of MCHR1 silencing on the expression levels of fibrotic genes in NHDF treated with PDGF-BB or vehicle. <bold>(B)</bold> Quantification of TGF&#x3b2;1 and CTGF protein abundance in the conditioned media of NHDF transfected with siMCHR1 and treated with PDGF-BB (n=4). Representative immunoblots are shown. <bold>(C)</bold> Effects of MCHR1 silencing on the expression levels of fibrotic genes in SSc dermal fibroblasts treated with PDGF-BB or vehicle. <bold>(D)</bold> Quantification of CTGF and TGF&#x3b2;1 protein abundance in the conditioned media of SSc dermal fibroblasts transfected with siMCHR1 and treated with PDGF-BB (n=4). Representative immunoblots are shown. *P &lt; 0.05, **P &lt; 0.01, ***P &lt; 0.001, ns, not significant, error bars = SEM.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-12-745308-g003.tif"/>
</fig>
</sec>
<sec id="s3_8">
<title>3.8 PDGF-BB Binds MCHR1</title>
<p>The findings in MCHR1 silenced fibroblasts suggest that PDGF-BB is working through MCHR1 to induce the expression of the profibrotic factors CTGF and TGF&#x3b2;1. We, therefore, examined whether MCH, the ligand of MCHR1, also regulates fibrotic genes in NHDF. Our data show that MCH does not increase profibrotic factor expression in NHDF (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure&#xa0;6</bold>
</xref>), suggesting that this effect is specific to MCHR1 activation by PDGF-BB. To examine whether PDGF-BB binds to MCHR1, we performed western ligand blotting using NHDF membrane fractions. Our data show that biotinylated PDGF-BB binds to a protein of the same molecular weight as MCHR1 (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4A</bold>
</xref>). Higher molecular weight bands correspond to the sizes of PDGFR. We further confirmed the interaction by western ligand blot using recombinant MCHR1. Again, PDGF-BB bound a band corresponding to recombinant human MCHR1 in a dose-dependent manner (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4B</bold>
</xref>). To confirm the binding of PDGF-BB to MCHR1, we performed SPR assay. SPR assay revealed that PDGF-BB binds to MCHR1 with an average K<sub>D</sub> of 46.6 nM (SEM &#xb1;8.1, n=3) (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4C</bold>
</xref>). Taken together, our data demonstrate that PDGF-BB directly binds to MCHR1, an association that regulates the expression of CTGF and TGF&#x3b2;1.</p>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>PDGF-BB binding to MCHR1. <bold>(A)</bold> PDGF-BB binding to MCHR1 was assessed using biotinylated PDGF-BB in a western ligand blot. PDGF-BB (40ng/ml) or vehicle control-treated NHDF membrane fractions were separated by electrophoresis on the same gel. The gel was transferred to a membrane and the membrane was cut in half. MCHR1 was detected on one membrane using anti-MCHR1 antibody, and proteins interacting with PDGF-BB were detected on the second membrane using biotinylated PDGF-BB. The molecular weight of MCHR1 corresponds to the 50- to 55-kd bands indicated by arrows. <bold>(B)</bold> PDGF-BB binding to recombinant human MCHR1 was assessed using biotinylated PDGF-BB in a western ligand blot. The indicated amount of recombinant MCHR1 was separated by electrophoresis on the same gel. The gel was transferred to a membrane and the membrane was cut in half. MCHR1 was detected on one membrane using anti-MCHR1 antibody, and proteins interacting with PDGF-BB were detected on the second membrane using biotinylated PDGF-BB. The molecular weight of recombinant MCHR1 corresponds to the 35- to 45-kd bands indicated by arrows. <bold>(C)</bold> Surface plasmon resonance (SPR) measurements of PDGF-BB and recombinant MCHR1. Black lines represent the model data and colored lines show the response of PDGF-BB binding to MCHR1 over time. Recombinant MCHR1 was immobilized on the CM5 chip and the indicated concentrations of PDGF-BB were added. Kinetic values are the mean &#xb1; SEM from 3 independent experiments, each ran in duplicate.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-12-745308-g004.tif"/>
</fig>
</sec>
<sec id="s3_9">
<title>3.9 MCHR1 Modulates cAMP Levels</title>
<p>The MCH-MCHR1 pathway is known to reduce cAMP levels in some cell types (<xref ref-type="bibr" rid="B8">8</xref>). To determine whether PDGF-BB activates cAMP signaling downstream of MCHR1, we measured cAMP levels in NHDF by ELISA. PDGF-BB reduced cAMP levels in NHDF, as did MCH (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5A</bold>
</xref>). Pre-incubation of NHDF with a selective MCHR1 inhibitor (ATC0065) prevented the reduction of cAMP in response to both PDGF-BB and MCH, indicating that PDGF-BB can also reduce cAMP levels through MCHR1.</p>
<fig id="f5" position="float">
<label>Figure&#xa0;5</label>
<caption>
<p>Effect of PDGF-BB on fibroblast cAMP levels and cell proliferation. <bold>(A)</bold> Cyclic adenosine monophosphate (cAMP) levels in NHDF treated with PDGF-BB (40ng/ml) or melanin concentrating hormone (MCH, 10<sup>-7</sup>M) for 30min. Cells were incubated with 50nM MCHR1 inhibitor (ATC0065) or DMSO as a vehicle control prior to treatment (n=8). Normalized cAMP levels in control cells were set at 1. <bold>(B)</bold> The cell proliferation rates of NHDF treated with PDGF-BB (40ng/ml) were measured at the indicated time points (n=5). <bold>(C)</bold> The cell proliferation rate in MCHR1 silenced NHDF (siMCHR1) and control NHDF (siCtr) stimulated with PDGF-BB (40ng/ml) or vehicle control (VC) were assessed at the indicated time points (n=5). <bold>(D)</bold> The cell proliferation rate was assessed in NHDF treated with 50nM of MCHR1 inhibitor (ATC0065) or DMSO as vehicle control 1 hr prior to PDGF-BB (n=3). Normalized absorbance at 0 h was set at 1. *P &lt; 0.05, **P &lt; 0.01, error bars = SEM.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-12-745308-g005.tif"/>
</fig>
</sec>
<sec id="s3_10">
<title>3.10 MCHR1 Does Not Mediate Cell Proliferation Induced by PDGF-BB</title>
<p>Fibroblast cell proliferation in SSc is associated with PDGF-BB signaling (<xref ref-type="bibr" rid="B7">7</xref>), and the MCH/MCHR1 pathway is reported to affect cell proliferation in some cell types (<xref ref-type="bibr" rid="B14">14</xref>, <xref ref-type="bibr" rid="B36">36</xref>). Thus, we investigated the effects of PDGF-BB and MCHR1 on cell proliferation in NHDF. As shown in <xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5B</bold>
</xref>, PDGF-BB induced cell proliferation, and the increase was significant 72 hrs after stimulation (<xref ref-type="fig" rid="f5">
<bold>Figure&#xa0;5B</bold>
</xref>). MCHR1 silencing in NHDF and inhibition of MCHR1 with ATC0065 did not affect PDGF-BB-induced cell proliferation (<xref ref-type="fig" rid="f5">
<bold>Figures&#xa0;5C, D</bold>
</xref>). Furthermore, treatment of NHDF with MCH had no effect on cell proliferation (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure&#xa0;7</bold>
</xref>). We further validated our data by examining caspase-3 protein abundance in NHDF. Consistent with our cell proliferation assay results, caspase-3 protein abundance significantly increased in PDGF-BB treated NHDF (<xref ref-type="supplementary-material" rid="SM1">
<bold>Supplementary Figure&#xa0;8</bold>
</xref>). These findings suggest that, although MCHR1 mediates PDGF-BB induction of CTGF and TGF&#x3b2;1 expression, PDGF-BB regulation of cell proliferation is independent of MCHR1.</p>
</sec>
<sec id="s3_11">
<title>3.11 MCHR1 Regulates the Expression of Several PDGF-BB Downstream Targets</title>
<sec id="s3_11_1">
<title>3.11.1 Genes Regulated by PDGF-BB <italic>via</italic> MCHR1</title>
<p>To identify which genes are regulated by PDGF-BB through its association with MCHR1, we performed total RNAseq of NHDF in which <italic>MCHR1</italic> was silenced with siMCHR1 and control (siCtr). NHDF were then treated with PDGF--BB or vehicle (VC) for 24 hrs. We identified 9,065 DE genes regulated by PDGF-BB in siCtr NHDF [&#x201c;PDGF-BB vs VC&#x201d; in siCtr NHDF] (q&lt;0.1) and 8,927 DE genes in PDGF-BB-treated siMCHR1 [&#x201c;PDGF-BB vs VC&#x201d; in siMCHR1 NHDF] (<xref ref-type="supplementary-material" rid="SM3">
<bold>Supplementary Table&#xa0;5</bold>
</xref>).</p>
<p>To identify genes regulated by PDGF-BB <italic>via</italic> MCHR1, we performed a meta-analysis using iPathway Guide for the DE genes in [&#x201c;PDGF-BB vs VC&#x201d; in siCtr NHDF] and [&#x201c;PDGF-BB vs VC&#x201d; in siMCHR1 NHDF]. We identified 1,473 DE genes that are unique to [&#x201c;PDGF-BB vs VC&#x201d; in siCtr NHDF] and thus considered to be driven by PDGF-BB through MCHR1 (<xref ref-type="supplementary-material" rid="SM4">
<bold>Supplementary Table&#xa0;6</bold>
</xref>). Gastrin releasing peptide receptor (<italic>GRPR</italic>) (log2FC = 4.843; q = 0.00689), integrin subunit beta (<italic>ITGB</italic>) 4 (log2FC = -5.015; q = 0.00014), and vitronectin (<italic>VTN</italic>) (log2FC = -4.901; q = 0.00029) were in the list of DE genes (<xref ref-type="supplementary-material" rid="SM4">
<bold>Supplementary Table&#xa0;6</bold>
</xref>), all genes reported to be associated with fibrosis or inflammation (<xref ref-type="bibr" rid="B37">37</xref>&#x2013;<xref ref-type="bibr" rid="B39">39</xref>).</p>
<p>To investigate the functional roles of the DE genes, a Gene Ontology (GO) analysis was performed and revealed the enrichment of biological processes related to &#x201c;cell communication&#x201d;, &#x201c;development&#x201d;, &#x201c;biosynthesis and metabolism&#x201d;, &#x201c;DNA and RNA regulation&#x201d;, &#x201c;immune responses&#x201d; and &#x201c;cell proliferation&#x201d; among the top 40 most perturbed GO terms unique to &#x201c;PDGF-BB vs VC&#x201d; in siCtr NHDF (<xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref> and <xref ref-type="supplementary-material" rid="SM5">
<bold>Supplementary Table&#xa0;7</bold>
</xref>). Other terms related to ubiquitination, NF-kappaB signaling and hippo signaling were also enriched, a signature also observed in blood samples from SSc patients (<xref ref-type="bibr" rid="B40">40</xref>, <xref ref-type="bibr" rid="B41">41</xref>).</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Top 40 most enriched biological processes which are unique to [PDGF-BB treated vs VC siCtr NHDF].</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="left">GO name</th>
<th valign="top" align="center">Count DE</th>
<th valign="top" align="center">Count All</th>
<th valign="top" align="center">p-value</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">cell communication</td>
<td valign="top" align="center">2948</td>
<td valign="top" align="center">4913</td>
<td valign="top" align="center">0.00011</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">regulation of macromolecule biosynthetic process</td>
<td valign="top" align="center">2058</td>
<td valign="top" align="center">3401</td>
<td valign="top" align="center">0.0002</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bdd7ee">regulation of cell division</td>
<td valign="top" align="center">101</td>
<td valign="top" align="center">139</td>
<td valign="top" align="center">0.00021</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">aromatic compound biosynthetic process</td>
<td valign="top" align="center">2163</td>
<td valign="top" align="center">3581</td>
<td valign="top" align="center">0.00023</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">regulation of biosynthetic process</td>
<td valign="top" align="center">2171</td>
<td valign="top" align="center">3596</td>
<td valign="top" align="center">0.00026</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">nucleobase-containing compound biosynthetic process</td>
<td valign="top" align="center">2128</td>
<td valign="top" align="center">3524</td>
<td valign="top" align="center">0.00029</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">organic cyclic compound biosynthetic process</td>
<td valign="top" align="center">2232</td>
<td valign="top" align="center">3702</td>
<td valign="top" align="center">0.00031</td>
</tr>
<tr>
<td valign="top" align="left">signaling</td>
<td valign="top" align="center">2926</td>
<td valign="top" align="center">4890</td>
<td valign="top" align="center">0.00035</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">anatomical structure maturation</td>
<td valign="top" align="center">117</td>
<td valign="top" align="center">165</td>
<td valign="top" align="center">0.00036</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">heterocycle biosynthetic process</td>
<td valign="top" align="center">2158</td>
<td valign="top" align="center">3578</td>
<td valign="top" align="center">0.00037</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffeb9c">RNA metabolic process</td>
<td valign="top" align="center">2430</td>
<td valign="top" align="center">4044</td>
<td valign="top" align="center">0.00043</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bdd7ee">positive regulation of endothelial cell proliferation</td>
<td valign="top" align="center">65</td>
<td valign="top" align="center">86</td>
<td valign="top" align="center">0.00046</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">regulation of cellular macromolecule biosynthetic process</td>
<td valign="top" align="center">1998</td>
<td valign="top" align="center">3309</td>
<td valign="top" align="center">0.00049</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">regulation of cellular biosynthetic process</td>
<td valign="top" align="center">2124</td>
<td valign="top" align="center">3525</td>
<td valign="top" align="center">0.00055</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">negative regulation of cell adhesion</td>
<td valign="top" align="center">152</td>
<td valign="top" align="center">222</td>
<td valign="top" align="center">0.00072</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">regulation of substrate adhesion-dependent cell spreading</td>
<td valign="top" align="center">40</td>
<td valign="top" align="center">50</td>
<td valign="top" align="center">0.00083</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffeb9c">base-excision repair</td>
<td valign="top" align="center">33</td>
<td valign="top" align="center">40</td>
<td valign="top" align="center">0.00087</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bdd7ee">regulation of cytokinesis</td>
<td valign="top" align="center">56</td>
<td valign="top" align="center">74</td>
<td valign="top" align="center">0.00107</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffeb9c">regulation of transcription by RNA polymerase I</td>
<td valign="top" align="center">25</td>
<td valign="top" align="center">29</td>
<td valign="top" align="center">0.00108</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">positive regulation of chemotaxis</td>
<td valign="top" align="center">81</td>
<td valign="top" align="center">112</td>
<td valign="top" align="center">0.00108</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">cellular response to vascular endothelial growth factor stimulus</td>
<td valign="top" align="center">43</td>
<td valign="top" align="center">55</td>
<td valign="top" align="center">0.0013</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">negative regulation of intracellular signal transduction</td>
<td valign="top" align="center">300</td>
<td valign="top" align="center">464</td>
<td valign="top" align="center">0.00149</td>
</tr>
<tr>
<td valign="top" align="left">protein polyubiquitination</td>
<td valign="top" align="center">214</td>
<td valign="top" align="center">325</td>
<td valign="top" align="center">0.00185</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffeb9c">positive regulation of transcription by RNA polymerase I</td>
<td valign="top" align="center">18</td>
<td valign="top" align="center">20</td>
<td valign="top" align="center">0.00207</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">neurogenesis</td>
<td valign="top" align="center">857</td>
<td valign="top" align="center">1393</td>
<td valign="top" align="center">0.00209</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">regulation of immune system process</td>
<td valign="top" align="center">696</td>
<td valign="top" align="center">1123</td>
<td valign="top" align="center">0.0021</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">axonogenesis</td>
<td valign="top" align="center">267</td>
<td valign="top" align="center">412</td>
<td valign="top" align="center">0.00218</td>
</tr>
<tr>
<td valign="top" align="left">I-kappaB kinase/NF-kappaB signaling</td>
<td valign="top" align="center">167</td>
<td valign="top" align="center">250</td>
<td valign="top" align="center">0.00226</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">catechol-containing compound biosynthetic process</td>
<td valign="top" align="center">11</td>
<td valign="top" align="center">11</td>
<td valign="top" align="center">0.00245</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">catecholamine biosynthetic process</td>
<td valign="top" align="center">11</td>
<td valign="top" align="center">11</td>
<td valign="top" align="center">0.00245</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">inositol metabolic process</td>
<td valign="top" align="center">11</td>
<td valign="top" align="center">11</td>
<td valign="top" align="center">0.00245</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">positive regulation of immune system process</td>
<td valign="top" align="center">457</td>
<td valign="top" align="center">726</td>
<td valign="top" align="center">0.00254</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">immune effector process</td>
<td valign="top" align="center">576</td>
<td valign="top" align="center">924</td>
<td valign="top" align="center">0.00254</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">developmental maturation</td>
<td valign="top" align="center">143</td>
<td valign="top" align="center">212</td>
<td valign="top" align="center">0.00256</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">immune response-regulating signaling pathway</td>
<td valign="top" align="center">192</td>
<td valign="top" align="center">291</td>
<td valign="top" align="center">0.00268</td>
</tr>
<tr>
<td valign="top" align="left">hippo signaling</td>
<td valign="top" align="center">34</td>
<td valign="top" align="center">43</td>
<td valign="top" align="center">0.00297</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bdd7ee">attachment of mitotic spindle microtubules to kinetochore</td>
<td valign="top" align="center">14</td>
<td valign="top" align="center">15</td>
<td valign="top" align="center">0.00327</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">immune response-regulating cell surface receptor signaling pathway</td>
<td valign="top" align="center">190</td>
<td valign="top" align="center">289</td>
<td valign="top" align="center">0.00357</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffc7ce">regulation of nucleobase-containing compound metabolic process</td>
<td valign="top" align="center">2045</td>
<td valign="top" align="center">3415</td>
<td valign="top" align="center">0.00366</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#bdd7ee">positive regulation of epithelial cell proliferation</td>
<td valign="top" align="center">114</td>
<td valign="top" align="center">167</td>
<td valign="top" align="center">0.00366</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Table is sorted based on p-value. Group color: Biological processes related to cell communication (orange), biosynthetic and metabolic process (red), cell proliferation (light blue), development (green), DNA and RNA regulation (yellow) and immune response (dark blue). The Count DE column shows the number of DE genes in each biological process, and the Count All column shows how many genes are in this GO term. The full output table is shown in <xref ref-type="supplementary-material" rid="SM5">
<bold>Supplementary Table&#xa0;7</bold>
</xref>. DE, differentially expressed; GO, gene ontology.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<p>The predicted upstream regulators analysis performed using iPathwayGuide is based on the gene expression data from our DE genes. iPathwayGuide predicts the activation or inhibition of each regulator based on the number of DE target genes whose fold change is consistent with the regulator predicted activity (activated or inhibited), and the sign of the interaction between the regulator and the targets (positive or negative). This analysis identified 336 upstream regulators, out of which 34 were unique to [&#x201c;PDGF-BB vs. VC&#x201d; in siCtr NHDF] (<xref ref-type="supplementary-material" rid="SM6">
<bold>Supplementary Table&#xa0;8</bold>
</xref>).</p>
</sec>
<sec id="s3_11_2">
<title>3.11.2 Genes Impacted by MCHR1 Silencing</title>
<p>We also performed another analysis to identify genes downstream of PDGF-BB that are impacted by MCHR1 silencing. This DE analysis returned 1,095 DE genes (q&lt;0.1) (<xref ref-type="supplementary-material" rid="SM7">
<bold>Supplementary Table&#xa0;9</bold>
</xref>). Consistent with our qPCR data, <italic>TGF&#x3b2;1</italic> was downregulated in siMCHR1 NHDF (log2FC = -0.207; q = 8.073 &#xd7; 10<sup>&#x2212;4</sup>). <italic>Col1&#x3b1;1</italic>, <italic>Col2&#x3b1;1</italic>, <italic>Col3&#x3b1;1</italic>, and <italic>FN1</italic> expression was also downregulated in PDGF-treated siMCHR1 NHDF compared to PDGF-BB treated siCtr NHDF. GO analysis revealed the enrichment of biological processes related to &#x201c;ECM remodeling&#x201d;, &#x201c;development&#x201d;, &#x201c;cell communication&#x201d;, &#x201c;immune responses&#x201d; and &#x201c;secretion&#x201d; among the top 40 most perturbed biological processes in PDGF-BB treated siMCHR1 NHDF vs. PDGF-BB treated siCtr NHDF (<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref> and <xref ref-type="supplementary-material" rid="SM8">
<bold>Supplementary Table&#xa0;10</bold>
</xref>). General terms pertaining to cell signaling were also enriched, as was the MAPK cascade, albeit not in the top 40 most enriched terms (82/599; DE count/All count, p = 0.00019). Taken together, our findings identified pathways and biological processes regulated by PDGF-BB in an MCHR1 dependent and independent manner.</p>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Top 40 most enriched biological processes in PDGF-BB-treated [siMCHR1 NHDF vs siCtr NHDF].</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="left">GO name</th>
<th valign="top" align="center">Count DE</th>
<th valign="top" align="center">Count All</th>
<th valign="top" align="center">p-value</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left" style="background-color:#cc8cf4">extracellular matrix organization</td>
<td valign="top" align="center">75</td>
<td valign="top" align="center">259</td>
<td valign="top" align="center">5.50E-20</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#cc8cf4">extracellular structure organization</td>
<td valign="top" align="center">75</td>
<td valign="top" align="center">259</td>
<td valign="top" align="center">5.50E-20</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">regulation of multicellular organismal process</td>
<td valign="top" align="center">297</td>
<td valign="top" align="center">2010</td>
<td valign="top" align="center">4.60E-19</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">response to chemical</td>
<td valign="top" align="center">368</td>
<td valign="top" align="center">2736</td>
<td valign="top" align="center">4.50E-17</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">blood vessel development</td>
<td valign="top" align="center">103</td>
<td valign="top" align="center">478</td>
<td valign="top" align="center">1.00E-16</td>
</tr>
<tr>
<td valign="top" align="left">Signaling</td>
<td valign="top" align="center">466</td>
<td valign="top" align="center">3763</td>
<td valign="top" align="center">1.40E-15</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">vasculature development</td>
<td valign="top" align="center">104</td>
<td valign="top" align="center">504</td>
<td valign="top" align="center">1.60E-15</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">cardiovascular system development</td>
<td valign="top" align="center">104</td>
<td valign="top" align="center">504</td>
<td valign="top" align="center">1.60E-15</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">response to external stimulus</td>
<td valign="top" align="center">239</td>
<td valign="top" align="center">1608</td>
<td valign="top" align="center">2.80E-15</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">blood vessel morphogenesis</td>
<td valign="top" align="center">90</td>
<td valign="top" align="center">412</td>
<td valign="top" align="center">4.30E-15</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">response to type I interferon</td>
<td valign="top" align="center">32</td>
<td valign="top" align="center">72</td>
<td valign="top" align="center">4.50E-15</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">immune response</td>
<td valign="top" align="center">179</td>
<td valign="top" align="center">1102</td>
<td valign="top" align="center">6.20E-15</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">biological adhesion</td>
<td valign="top" align="center">148</td>
<td valign="top" align="center">850</td>
<td valign="top" align="center">6.60E-15</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">cell adhesion</td>
<td valign="top" align="center">147</td>
<td valign="top" align="center">847</td>
<td valign="top" align="center">1.10E-14</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">response to organic substance</td>
<td valign="top" align="center">294</td>
<td valign="top" align="center">2129</td>
<td valign="top" align="center">1.30E-14</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">cellular response to chemical stimulus</td>
<td valign="top" align="center">290</td>
<td valign="top" align="center">2101</td>
<td valign="top" align="center">2.40E-14</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">response to stimulus</td>
<td valign="top" align="center">613</td>
<td valign="top" align="center">5373</td>
<td valign="top" align="center">3.20E-14</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#cc8cf4">wound healing</td>
<td valign="top" align="center">78</td>
<td valign="top" align="center">343</td>
<td valign="top" align="center">3.30E-14</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">type I interferon signaling pathway</td>
<td valign="top" align="center">30</td>
<td valign="top" align="center">68</td>
<td valign="top" align="center">4.10E-14</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">cellular response to type I interferon</td>
<td valign="top" align="center">30</td>
<td valign="top" align="center">68</td>
<td valign="top" align="center">4.10E-14</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">immune system process</td>
<td valign="top" align="center">254</td>
<td valign="top" align="center">1783</td>
<td valign="top" align="center">5.10E-14</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">anatomical structure morphogenesis</td>
<td valign="top" align="center">254</td>
<td valign="top" align="center">1783</td>
<td valign="top" align="center">5.10E-14</td>
</tr>
<tr>
<td valign="top" align="left">cell surface receptor signaling pathway</td>
<td valign="top" align="center">262</td>
<td valign="top" align="center">1862</td>
<td valign="top" align="center">7.80E-14</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">system development</td>
<td valign="top" align="center">382</td>
<td valign="top" align="center">3005</td>
<td valign="top" align="center">1.00E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#808080">Secretion</td>
<td valign="top" align="center">160</td>
<td valign="top" align="center">976</td>
<td valign="top" align="center">1.00E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#cc8cf4">response to wounding</td>
<td valign="top" align="center">87</td>
<td valign="top" align="center">413</td>
<td valign="top" align="center">1.20E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">cell communication</td>
<td valign="top" align="center">460</td>
<td valign="top" align="center">3789</td>
<td valign="top" align="center">1.20E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">tube morphogenesis</td>
<td valign="top" align="center">109</td>
<td valign="top" align="center">584</td>
<td valign="top" align="center">4.00E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">Angiogenesis</td>
<td valign="top" align="center">77</td>
<td valign="top" align="center">352</td>
<td valign="top" align="center">4.30E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">response to stress</td>
<td valign="top" align="center">345</td>
<td valign="top" align="center">2672</td>
<td valign="top" align="center">4.50E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">cytokine-mediated signaling pathway</td>
<td valign="top" align="center">93</td>
<td valign="top" align="center">467</td>
<td valign="top" align="center">5.30E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">regulation of developmental process</td>
<td valign="top" align="center">247</td>
<td valign="top" align="center">1755</td>
<td valign="top" align="center">5.40E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">tube development</td>
<td valign="top" align="center">126</td>
<td valign="top" align="center">719</td>
<td valign="top" align="center">5.70E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#808080">export from cell</td>
<td valign="top" align="center">152</td>
<td valign="top" align="center">929</td>
<td valign="top" align="center">5.80E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#4472c4">response to cytokine</td>
<td valign="top" align="center">131</td>
<td valign="top" align="center">761</td>
<td valign="top" align="center">7.20E-13</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">multicellular organismal process</td>
<td valign="top" align="center">501</td>
<td valign="top" align="center">4258</td>
<td valign="top" align="center">1.10E-12</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#ffcc99">cellular response to organic substance</td>
<td valign="top" align="center">245</td>
<td valign="top" align="center">1749</td>
<td valign="top" align="center">1.20E-12</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#808080">regulation of localization</td>
<td valign="top" align="center">246</td>
<td valign="top" align="center">1759</td>
<td valign="top" align="center">1.30E-12</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#808080">secretion by cell</td>
<td valign="top" align="center">148</td>
<td valign="top" align="center">906</td>
<td valign="top" align="center">1.40E-12</td>
</tr>
<tr>
<td valign="top" align="left" style="background-color:#c6efce">tissue development</td>
<td valign="top" align="center">186</td>
<td valign="top" align="center">1231</td>
<td valign="top" align="center">1.90E-12</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Table is sorted based on p-value. Group color: Biological processes related to ECM remodeling (purple), cell communication (orange), development (green), immune response (dark blue), and secretion (gray). The Count DE column shows the number of DE genes in each biological process, and the Count All column shows how many genes are in this biological process. The full output table is shown in <xref ref-type="supplementary-material" rid="SM8">
<bold>Supplementary Table&#xa0;10</bold>
</xref>. DE, differentially expressed; GO, gene ontology.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
</sec>
</sec>
<sec id="s4" sec-type="discussion">
<title>4 Discussion</title>
<sec id="s4_1">
<title>4.1 PDGF-BB Promotes Fibrosis Independently of TGF&#x3b2; Receptor</title>
<p>This study is the first to demonstrate a role for MCHR1 in mediating the profibrotic effects of PDGF-BB and its reduction of cAMP. The PDGF-BB mediated increase in CTGF and TGF&#x3b2;1 levels was MCHR1-dependent and TGF&#x3b2; receptor-independent. We observed that PDGF-BB and BLM stimulation significantly increased <italic>MCHR1</italic> expression in NHDF while TGF&#x3b2;1 decreased its expression, suggesting that TGF&#x3b2;1 might provide negative feedback for MCHR1 expression since TGF&#x3b2;1 is induced by PDGF-BB in NHDF (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6A</bold>
</xref>, arrow #1). BLM is the reagent commonly used to induce SSc-like fibrotic responses in murine and human skin (<xref ref-type="bibr" rid="B42">42</xref>). BLM is reported to induce pro-inflammatory cytokines such as TGF&#x3b2;1 and CTGF in human dermal fibroblasts <italic>in vitro</italic> (<xref ref-type="bibr" rid="B43">43</xref>), suggesting that the combination of several pro-inflammatory mediators, even in the presence of TGF&#x3b2;1, can increase the expression of MCHR1, consistent with our data in SSc dermal fibroblasts showing high levels of MCHR1. Similar to our findings, Ziogas et al. showed that dextran sodium sulfate (DSS) induces MCHR1 expression and inflammatory colitis <italic>via</italic> several inflammatory mediators, including TGF&#x3b2;1, in myofibroblasts (<xref ref-type="bibr" rid="B14">14</xref>, <xref ref-type="bibr" rid="B44">44</xref>).</p>
<fig id="f6" position="float">
<label>Figure&#xa0;6</label>
<caption>
<p>Schematic representing the role of MCHR1 in the fibrotic response elicited by PDGF-BB in NHDF. <bold>(A)</bold> PDGF-BB induces MCHR1, TGF&#x3b2;1 and CTGF (arrow #1,2). PDGF-BB induced TGF&#x3b2;1 increases ECM deposition (arrow #3,4). MCHR1 reduces intracellular cAMP levels and enhances the cell response to TGF&#x3b2;1 (arrow #5). <bold>(B)</bold> Without MCHR1 signaling, intracellular cAMP levels increase (arrow #5), and PDGF signaling is attenuated (arrow #6). Increased cAMP levels reduce PDGF-BB induced TGF&#x3b2;1 and CTGF and prevent the cell response to TGF&#x3b2;1 (arrow #4).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-12-745308-g006.tif"/>
</fig>
<p>TGF&#x3b2; is thought to be a master regulator of the fibrotic response and is a prototype fibrotic factor (<xref ref-type="bibr" rid="B5">5</xref>). However, PDGF is also important in the pathogenesis of fibrosis. PDGF was initially thought to only promote fibroblast proliferation, but activation of PDGF signaling alone can induce skin and internal organ fibrosis in mice (<xref ref-type="bibr" rid="B45">45</xref>). We observed that PDGF-BB induced the fibrotic genes <italic>TGF&#x3b2;1</italic> and <italic>CTGF</italic> in NHDF (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6A</bold>
</xref>, arrow #2). The increase in <italic>CTGF</italic> occurred earlier than <italic>TGF&#x3b2;1</italic>, both of which were induced earlier than other fibrotic genes such as <italic>Col1&#x3b1;1</italic> and <italic>FN1</italic>. This led us to speculate that TGF&#x3b2;1 may mediate, at least in part, the response to PDGF-BB in NHDF. In fact, our data showed that TGF&#x3b2;1 mediated ECM production in response to PDGF-BB (<xref ref-type="fig" rid="f6">
<bold>Figure&#xa0;6A</bold>
</xref>, arrows #3,4), but the increase in CTGF and TGF&#x3b2;1 was independent of TGF&#x3b2; signaling. Interestingly, we did not see CTGF induction by PDGF-BB in SSc dermal fibroblasts. We speculate this is because SSc fibroblasts produce more CTGF at baseline (<xref ref-type="bibr" rid="B46">46</xref>), and thus the amplitude of the response to PDGF stimulation may not be as robust as in NHDF, or because a negative feedback loop is in place in SSc fibroblasts to block further induction of CTGF.</p>
</sec>
<sec id="s4_2">
<title>4.2 MCHR1 Mediates the Profibrotic Effects of PDGF-BB</title>
<p>We explored whether the profibrotic effects of PDGF-BB were mediated by MCHR1 for two reasons: 1) PDGF-BB increased MCHR1 levels in NHDF and 2) MCH stimulation alone did not induce the expression of fibrotic genes nor MCHR1. However, previous studies suggested that MCH had profibrotic properties. MCH infusion increased profibrotic genes including <italic>TGF&#x3b2;1</italic> in mouse liver (<xref ref-type="bibr" rid="B16">16</xref>), and co-stimulation of MCH with IGF1 or TGF&#x3b2;1 enhanced cell proliferation rate or collagen production, respectively, in CCD-18Co human myofibroblasts (<xref ref-type="bibr" rid="B14">14</xref>). Human microvascular endothelial cells produced MCH following stimulation with Th2 cytokines such as IL4 and IL13 (<xref ref-type="bibr" rid="B47">47</xref>). IL4 and IL13 contribute to fibrosis by promoting cell differentiation and collagen production and are found in both serum and lesional skin tissues of SSc patients (<xref ref-type="bibr" rid="B48">48</xref>). These studies suggest that IL4 and IL13 can induce MCH, contributing to the pathogenesis of fibrosis in SSc patients. However further investigation will be needed since MCH levels of peripheral tissue or plasma in SSc patients have not been reported, and the contribution of MCH in SSc is unexplored.</p>
<p>The interaction between MCHR1 and PDGF-BB or PDGF receptors has not been reported, however, it is quite possible that PDGF signaling activates MCHR1 since transactivation of GPCR by growth factor receptor-tyrosine kinase has been shown (<xref ref-type="bibr" rid="B49">49</xref>, <xref ref-type="bibr" rid="B50">50</xref>). We determined that <italic>MCHR1</italic> silencing in NHDF significantly reduced PDGF-BB-induced <italic>TGF&#x3b2;1</italic> and <italic>CTGF</italic> levels, indicating that PDGF-BB signaling could be modulated by MCHR1. GPCRs are involved in the transmission of PDGF signaling (<xref ref-type="bibr" rid="B51">51</xref>), leading us to speculate that MCHR1 may be required to activate downstream signaling of PDGF. We assume that MCHR1 upregulation by PDGF-BB is the result of a positive feedback of PDGF signaling, consistent with other reports showing that a ligand can induce the expression of its receptor (<xref ref-type="bibr" rid="B52">52</xref>, <xref ref-type="bibr" rid="B53">53</xref>). Moreover, our western ligand blot and SPR assay results suggest that PDGF-BB directly binds to MCHR1 to activate downstream pathways. MCHR1 then interacts with the Gi/o/q protein and regulates intracellular signaling (<xref ref-type="bibr" rid="B8">8</xref>).</p>
</sec>
<sec id="s4_3">
<title>4.3 cAMP Levels Are Reduced in PDGF-BB-Stimulated NHDF</title>
<p>In <italic>MCHR1</italic> transfected cells, MCH binding to MCHR1 can inhibit the accumulation of cAMP, activate MAP kinase signaling, induce IP3 production, and increase intracellular Ca<sup>2+</sup> (<xref ref-type="bibr" rid="B8">8</xref>). We observed a reduction in cAMP levels following PDGF-BB and MCH treatment in NHDF, and MCHR1 chemical inhibition neutralized cAMP reduction due to both PDGF-BB and MCH, suggesting that PDGF-BB can directly activate the MCHR1 signaling pathway. This data also suggests that MCHR1 inhibition has anti-fibrotic effects by increasing cAMP levels. Elevated intracellular cAMP levels have been shown to exert anti-fibrotic effects, decrease fibroblast proliferation, promote fibroblast cell death, and inhibit ECM production (<xref ref-type="bibr" rid="B54">54</xref>). Increased cAMP levels in MDCK cells prevented TGF&#x3b2;&#x2212;mediated increases in &#x3b1;SMA levels, suggesting that increased cAMP can inhibit the fibrotic response induced by TGF&#x3b2;, likely as a result of inhibition of Smad3 activation (<xref ref-type="bibr" rid="B54">54</xref>). Increased cAMP levels in lung fibroblasts can inhibit PDGF-BB-induced CTGF and TGF&#x3b2;1 (<xref ref-type="bibr" rid="B55">55</xref>). Based on our findings and those of others, we speculate that increased MCHR1 expression levels might modulate cAMP levels in NHDF and enhance the fibrotic response to PDGF-BB (<xref ref-type="fig" rid="f6">
<bold>Figures&#xa0;6A, B</bold>
</xref> arrow #5, 6).</p>
<p>Interestingly, Janus kinase-1 (JAK1) and PDGF-receptor-&#x3b1; (PDGFRA) were among the list of 34 genes predicted to be upstream regulators of DE genes regulated by PDGF-BB <italic>via</italic> MCHR1 [&#x201c;PDGF-BB vs. VC&#x201d; in siCtr NHDF] (<xref ref-type="supplementary-material" rid="SM6">
<bold>Supplementary Table&#xa0;8</bold>
</xref>). JAK1 and PDGFRA are involved in PDGF signaling (<xref ref-type="bibr" rid="B56">56</xref>, <xref ref-type="bibr" rid="B57">57</xref>), indicating that MCHR1 might modulate PDGF-BB signaling. In support of this observation, Zigoas et&#xa0;al. showed that the inhibition of MCH/MCHR1 signaling attenuated Smad3 expression levels in mouse fibroblasts of a colitis murine model (<xref ref-type="bibr" rid="B14">14</xref>). In contrast, the cAMP signaling pathway was activated by PDGF in several cell types as a result of a negative feedback loop (<xref ref-type="bibr" rid="B58">58</xref>, <xref ref-type="bibr" rid="B59">59</xref>). Our observation of decreased cAMP levels could be due to the use of different cell types, PDGF-BB concentrations, and experimental time points.</p>
</sec>
<sec id="s4_4">
<title>4.4 Targeting MCHR1 as a Therapeutic Strategy Against Fibrosis</title>
<p>In experimental colitis, MCHR1 antagonist reduced colonic inflammation, probably by blocking IL10 upregulation, suggesting that inhibition of MCH/MCHR1 signaling could be a novel anti-inflammatory therapeutic approach (<xref ref-type="bibr" rid="B60">60</xref>, <xref ref-type="bibr" rid="B61">61</xref>). Anti-fibrotic effects of MCH/MCHR1 inhibition have been reported. Anti-MCH antibody suppressed the production of fibrotic genes in experimental colitis (<xref ref-type="bibr" rid="B14">14</xref>), and oral administration of MCHR1 antagonist decreased <italic>Col1&#x3b1;1</italic> and <italic>TGF&#x3b2;1</italic> expression levels in a dose-dependent manner in the liver of C57BL/6 J mice with severe hepatic steatosis (<xref ref-type="bibr" rid="B16">16</xref>). Previous reports suggest that the anti-fibrotic effects of alpha-melanin stimulating hormone (&#x3b1;-MSH) are actually due to inhibition of MCH/MCHR1 signaling (<xref ref-type="bibr" rid="B14">14</xref>, <xref ref-type="bibr" rid="B61">61</xref>), since &#x3b1;-MSH can neutralize the functional effects of MCH (<xref ref-type="bibr" rid="B62">62</xref>, <xref ref-type="bibr" rid="B63">63</xref>). The anti-fibrotic effects of &#x3b1;-MSH were reported in NHDF and in a murine model of skin fibrosis induced by TGF&#x3b2;1 or BLM (<xref ref-type="bibr" rid="B64">64</xref>, <xref ref-type="bibr" rid="B65">65</xref>), suggesting that inhibition of MCH/MCHR1 signaling has anti-fibrotic effects in skin.</p>
<p>The functional enrichment analysis of our RNAseq data revealed the involvement of MCHR1 in the fibrotic and inflammatory responses induced by PDGF-BB. Genes and biological processes involved in fibrosis were exclusively enriched by PDGF-BB in NHDF. For example, PDGF-BB decreased ITGB4 expression, a signature that is associated with enhanced lipopolysaccharide-induced inflammation (<xref ref-type="bibr" rid="B38">38</xref>). GRPR is the G protein-coupled receptor that binds to gastrin-releasing peptide (GRP). GRP was shown to induce the fibrotic response in a murine model of lung fibrosis and in human cell lines (<xref ref-type="bibr" rid="B37">37</xref>, <xref ref-type="bibr" rid="B66">66</xref>), and GRPR antagonism can reverse the effect of GRP on cell proliferation (<xref ref-type="bibr" rid="B67">67</xref>), indicating increased GRPR may be involved in the fibrotic response.</p>
<p>GO term analysis revealed some biological processes are deregulated by PDGF-BB <italic>via</italic> MCHR1. Consistent with previous reports, our data indicated MCHR1 could modulate the immune system (<xref ref-type="bibr" rid="B12">12</xref>) and inflammatory responses (<xref ref-type="bibr" rid="B15">15</xref>). The biological processes related to biosynthetic, metabolic, and development are also perturbed. This is not surprising as MCHR1 modulates energy metabolism (<xref ref-type="bibr" rid="B11">11</xref>), likely in association with leptin (<xref ref-type="bibr" rid="B68">68</xref>). The biological process related to ubiquitination may affect SSc pathogenesis by modulating TGF&#x3b2; signaling and TLR-dependent signaling (<xref ref-type="bibr" rid="B69">69</xref>, <xref ref-type="bibr" rid="B70">70</xref>). We also observed that the biological processes related to ECM remodeling and PDGF-BB signaling were perturbed when <italic>MCHR1</italic> expression is silenced in NHDF, indicating that silencing of MCHR1 mediated the effects of PDGF-BB in the regulation of these genes, namely PDGFRA, PDGFRB, PDGFD, and MAPK9. Interestingly, we found several biological processes related to vascular development. Vasculopathy is one of the most common features of SSc (<xref ref-type="bibr" rid="B1">1</xref>), and MCHR1 has not been previously reported to contribute to angiogenesis or vasculopathy.</p>
</sec>
<sec id="s4_5">
<title>4.5 PDGF-BB Induces Cell Proliferation Independently of MCHR1 in NHDF</title>
<p>In the present study, we observed that PDGF-BB induced cell proliferation of NHDF, in agreement with previous studies (<xref ref-type="bibr" rid="B45">45</xref>), whereas MCH did not. In addition, <italic>MCHR1</italic> silencing or chemical inhibition did not affect cell proliferation. It is reported that PDGF-BB-induced cell proliferation is suppressed by inhibition of PDGF receptor (<xref ref-type="bibr" rid="B71">71</xref>). Taken together, these findings lead us to conclude that PDGF-BB induces cell proliferation in an MCHR1-independent manner. MCH/MCHR1 signaling in cell proliferation is still controversial. In some cell types, MCH/MCHR1 signaling inhibited cell proliferation, e.g., MCH had inhibitory effects on CD3+ lymphocyte proliferation (<xref ref-type="bibr" rid="B12">12</xref>) and MCHR1 antagonism induced proliferation of progenitor cells in mouse brain (<xref ref-type="bibr" rid="B72">72</xref>). In contrast, MCH induced cell proliferation in DSS-treated human myofibroblasts (<xref ref-type="bibr" rid="B14">14</xref>). There are some possible explanations for these conflicting results: MCH/MCHR1 signaling can promote different responses depending on cell type, or cell proliferation rate might depend on the basal expression levels of MCHR1 since DSS treated human myofibroblasts showed higher levels of MCHR1. However, our study has some limitations. Although we found that transcription levels of MCHR1 were upregulated in SSc dermal fibroblasts, we did not examine the role of MCHR1 <italic>in vivo</italic>. We showed that PDGF-BB induces MCHR1 and confirmed that blocking PDGF-BB signaling by inhibiting PDGF receptor prevented the upregulation of MCHR1, but there is a possibility that MCHR1 is further activated by PDGF-BB-induced molecules or other factors. We also showed that PDGF-BB directly binds to MCHR1 by western ligand blot and SPR, however, we must also consider the possibility that PDGFR and MCHR1 are co-localized and PDGF-BB signals <italic>via</italic> both receptors simultaneously or sequentially.</p>
</sec>
</sec>
<sec id="s5">
<title>5 Conclusion</title>
<p>In conclusion, we are the first to show that MCHR1 contributes to the PDGF-BB-induced fibrotic response and the resulting increase in the potent profibrotic factors CTGF and TGF&#x3b2;1. Increased levels of MCHR1 in SSc fibroblasts can promote PDGF-BB signaling, increase TGF&#x3b2;1 and CTGF levels, modulate intracellular cAMP production, and increase the fibrotic response. Increased levels of MCHR1 can also potentially mediate the vasculopathy characteristic of SSc. Together, our data show that inhibition of MCHR1 should be considered as a potential therapeutic strategy for skin fibrosis.</p>
</sec>
<sec id="s6" sec-type="data-availability">
<title>Data Availability Statement</title>
<p>RNAseq data used in this study have been deposited on the NCBI GEO under access number GSE180488.</p>
</sec>
<sec id="s7" sec-type="ethics-statement">
<title>Ethics Statement</title>
<p>The studies involving human participants were reviewed and approved by The Institutional Review Board of the University of Pittsburgh, the Institutional Review Board of the Medical University of South Carolina. The patients/participants provided their written informed consent to participate in this study.</p>
</sec>
<sec id="s8" sec-type="author-contributions">
<title>Author Contributions</title>
<p>Study design: NT and CF-B. Performed experiments: NT. Gene level analysis and systems level analysis: LR and WS. Writing of the manuscript, generation of figures: NT and CF-B. Reviewing the draft, comments: LR and WS. Manuscript editing: NT, LR, and CF-B. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec id="s9" sec-type="funding-information">
<title>Funding</title>
<p>This project was supported by K24AR060297 to CF-B, T32 AR050958 to LR, and the SmartState and Kitty Trask Holt endowment to CF-B.</p>
</sec>
<sec id="s10" sec-type="COI-statement">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s11" sec-type="disclaimer">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
</body>
<back>
<ack>
<title>Acknowledgments</title>
<p>SPR experiments were performed at the Biacore Molecular Interaction Shared Resource at Georgetown University, which is supported by a grant P30CA51008 from the National Cancer Institute. The authors are grateful to Dr. Aykut Uren at Georgetown University for helpful discussions and for conducting the SPR assay.</p>
</ack>
<sec id="s12" sec-type="supplementary-material">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fimmu.2021.745308/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fimmu.2021.745308/full#supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="Image_1.pdf" id="SM1" mimetype="application/pdf"/>
<supplementary-material xlink:href="Table_1.docx" id="SM2" mimetype="application/vnd.openxmlformats-officedocument.wordprocessingml.document"/>
<supplementary-material xlink:href="Table_5.xlsx" id="SM3" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
<supplementary-material xlink:href="Table_6.xlsx" id="SM4" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
<supplementary-material xlink:href="Table_7.xlsx" id="SM5" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
<supplementary-material xlink:href="Table_8.xlsx" id="SM6" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
<supplementary-material xlink:href="Table_9.xlsx" id="SM7" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
<supplementary-material xlink:href="Table_10.xlsx" id="SM8" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet"/>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<label>1</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Denton</surname> <given-names>CP</given-names>
</name>
<name>
<surname>Khanna</surname> <given-names>D</given-names>
</name>
</person-group>. <article-title>Systemic Sclerosis</article-title>. <source>Lancet</source> (<year>2017</year>) <volume>390</volume>(<issue>10103</issue>):<page-range>1685&#x2013;99</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/s0140-6736(17)30933-9</pub-id>
</citation>
</ref>
<ref id="B2">
<label>2</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pattanaik</surname> <given-names>D</given-names>
</name>
<name>
<surname>Brown</surname> <given-names>M</given-names>
</name>
<name>
<surname>Postlethwaite</surname> <given-names>BC</given-names>
</name>
<name>
<surname>Postlethwaite</surname> <given-names>AE</given-names>
</name>
</person-group>. <article-title>Pathogenesis of Systemic Sclerosis</article-title>. <source>Front Immunol</source> (<year>2015</year>) <volume>6</volume>:<elocation-id>272</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.3389/fimmu.2015.00272</pub-id>
</citation>
</ref>
<ref id="B3">
<label>3</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hinchcliff</surname> <given-names>M</given-names>
</name>
<name>
<surname>O&#x2019;Reilly</surname> <given-names>S</given-names>
</name>
</person-group>. <article-title>Current and Potential New Targets in Systemic Sclerosis Therapy: A New Hope</article-title>. <source>Curr Rheumatol Rep</source> (<year>2020</year>) <volume>22</volume>(<issue>8</issue>):<fpage>42</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s11926-020-00918-3</pub-id>
</citation>
</ref>
<ref id="B4">
<label>4</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Garrett</surname> <given-names>SM</given-names>
</name>
<name>
<surname>Baker Frost</surname> <given-names>D</given-names>
</name>
<name>
<surname>Feghali-Bostwick</surname> <given-names>C</given-names>
</name>
</person-group>. <article-title>The Mighty Fibroblast and Its Utility in Scleroderma Research</article-title>. <source>J Scleroderma Relat Disord</source> (<year>2017</year>) <volume>2</volume>(<issue>2</issue>):<fpage>69</fpage>&#x2013;<lpage>134</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.5301/jsrd.5000240</pub-id>
</citation>
</ref>
<ref id="B5">
<label>5</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ihn</surname> <given-names>H</given-names>
</name>
</person-group>. <article-title>Autocrine TGF-Beta Signaling in the Pathogenesis of Systemic Sclerosis</article-title>. <source>J Dermatol Sci</source> (<year>2008</year>) <volume>49</volume>(<issue>2</issue>):<page-range>103&#x2013;13</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.jdermsci.2007.05.014</pub-id>
</citation>
</ref>
<ref id="B6">
<label>6</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sonnylal</surname> <given-names>S</given-names>
</name>
<name>
<surname>Xu</surname> <given-names>S</given-names>
</name>
<name>
<surname>Jones</surname> <given-names>H</given-names>
</name>
<name>
<surname>Tam</surname> <given-names>A</given-names>
</name>
<name>
<surname>Sreeram</surname> <given-names>VR</given-names>
</name>
<name>
<surname>Ponticos</surname> <given-names>M</given-names>
</name>
<etal/>
</person-group>. <article-title>Connective Tissue Growth Factor Causes EMT-Like Cell Fate Changes <italic>In Vivo</italic> and <italic>In Vitro</italic>
</article-title>. <source>J Cell Sci</source> (<year>2013</year>) <volume>126</volume>(<issue>Pt 10</issue>):<page-range>2164&#x2013;75</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1242/jcs.111302</pub-id>
</citation>
</ref>
<ref id="B7">
<label>7</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Iwayama</surname> <given-names>T</given-names>
</name>
<name>
<surname>Olson</surname> <given-names>LE</given-names>
</name>
</person-group>. <article-title>Involvement of PDGF in Fibrosis and Scleroderma: Recent Insights From Animal Models and Potential Therapeutic Opportunities</article-title>. <source>Curr Rheumatol Rep</source> (<year>2013</year>) <volume>15</volume>(<issue>2</issue>):<elocation-id>304</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s11926-012-0304-0</pub-id>
</citation>
</ref>
<ref id="B8">
<label>8</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Presse</surname> <given-names>F</given-names>
</name>
<name>
<surname>Conductier</surname> <given-names>G</given-names>
</name>
<name>
<surname>Rovere</surname> <given-names>C</given-names>
</name>
<name>
<surname>Nahon</surname> <given-names>JL</given-names>
</name>
</person-group>. <article-title>The Melanin-Concentrating Hormone Receptors: Neuronal and Non-Neuronal Functions</article-title>. <source>Int J Obes Suppl</source> (<year>2014</year>) <volume>4</volume>(<supplement>Suppl 1</supplement>):<page-range>S31&#x2013;6</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/ijosup.2014.9</pub-id>
</citation>
</ref>
<ref id="B9">
<label>9</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kawauchi</surname> <given-names>H</given-names>
</name>
<name>
<surname>Kawazoe</surname> <given-names>I</given-names>
</name>
<name>
<surname>Tsubokawa</surname> <given-names>M</given-names>
</name>
<name>
<surname>Kishida</surname> <given-names>M</given-names>
</name>
<name>
<surname>Baker</surname> <given-names>BI</given-names>
</name>
</person-group>. <article-title>Characterization of Melanin-Concentrating Hormone in Chum Salmon Pituitaries</article-title>. <source>Nature</source> (<year>1983</year>) <volume>305</volume>(<issue>5932</issue>):<page-range>321&#x2013;3</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/305321a0</pub-id>
</citation>
</ref>
<ref id="B10">
<label>10</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Saito</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Cheng</surname> <given-names>M</given-names>
</name>
<name>
<surname>Leslie</surname> <given-names>FM</given-names>
</name>
<name>
<surname>Civelli</surname> <given-names>O</given-names>
</name>
</person-group>. <article-title>Expression of the Melanin-Concentrating Hormone (MCH) Receptor mRNA in the Rat Brain</article-title>. <source>J Comp Neurol</source> (<year>2001</year>) <volume>435</volume>(<issue>1</issue>):<fpage>26</fpage>&#x2013;<lpage>40</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1002/cne.1191</pub-id>
</citation>
</ref>
<ref id="B11">
<label>11</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pissios</surname> <given-names>P</given-names>
</name>
<name>
<surname>Bradley</surname> <given-names>RL</given-names>
</name>
<name>
<surname>Maratos-Flier</surname> <given-names>E</given-names>
</name>
</person-group>. <article-title>Expanding the Scales: The Multiple Roles of MCH in Regulating Energy Balance and Other Biological Functions</article-title>. <source>Endocr Rev</source> (<year>2006</year>) <volume>27</volume>(<issue>6</issue>):<page-range>606&#x2013;20</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1210/er.2006-0021</pub-id>
</citation>
</ref>
<ref id="B12">
<label>12</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Verlaet</surname> <given-names>M</given-names>
</name>
<name>
<surname>Adamantidis</surname> <given-names>A</given-names>
</name>
<name>
<surname>Coumans</surname> <given-names>B</given-names>
</name>
<name>
<surname>Chanas</surname> <given-names>G</given-names>
</name>
<name>
<surname>Zorzi</surname> <given-names>W</given-names>
</name>
<name>
<surname>Heinen</surname> <given-names>E</given-names>
</name>
<etal/>
</person-group>. <article-title>Human Immune Cells Express ppMCH mRNA and Functional MCHR1 Receptor</article-title>. <source>FEBS Lett</source> (<year>2002</year>) <volume>527</volume>(<issue>1-3</issue>):<page-range>205&#x2013;10</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/s0014-5793(02)03232-5</pub-id>
</citation>
</ref>
<ref id="B13">
<label>13</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hoogduijn</surname> <given-names>MJ</given-names>
</name>
<name>
<surname>Ancans</surname> <given-names>J</given-names>
</name>
<name>
<surname>Suzuki</surname> <given-names>I</given-names>
</name>
<name>
<surname>Estdale</surname> <given-names>S</given-names>
</name>
<name>
<surname>Thody</surname> <given-names>AJ</given-names>
</name>
</person-group>. <article-title>Melanin-Concentrating Hormone and Its Receptor Are Expressed and Functional in Human Skin</article-title>. <source>Biochem Biophys Res Commun</source> (<year>2002</year>) <volume>296</volume>(<issue>3</issue>):<fpage>698</fpage>&#x2013;<lpage>701</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/s0006-291x(02)00932-4</pub-id>
</citation>
</ref>
<ref id="B14">
<label>14</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ziogas</surname> <given-names>DC</given-names>
</name>
<name>
<surname>Gras-Miralles</surname> <given-names>B</given-names>
</name>
<name>
<surname>Mustafa</surname> <given-names>S</given-names>
</name>
<name>
<surname>Geiger</surname> <given-names>BM</given-names>
</name>
<name>
<surname>Najarian</surname> <given-names>RM</given-names>
</name>
<name>
<surname>Nagel</surname> <given-names>JM</given-names>
</name>
<etal/>
</person-group>. <article-title>Anti-Melanin-Concentrating Hormone Treatment Attenuates Chronic Experimental Colitis and Fibrosis</article-title>. <source>Am J Physiol Gastrointest Liver Physiol</source> (<year>2013</year>) <volume>304</volume>(<issue>10</issue>):<page-range>G876&#x2013;84</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1152/ajpgi.00305.2012</pub-id>
</citation>
</ref>
<ref id="B15">
<label>15</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Karagiannis</surname> <given-names>AK</given-names>
</name>
<name>
<surname>Ziogas</surname> <given-names>DC</given-names>
</name>
<name>
<surname>Gras-Miralles</surname> <given-names>B</given-names>
</name>
<name>
<surname>Geiger</surname> <given-names>BM</given-names>
</name>
<name>
<surname>Nagel</surname> <given-names>J</given-names>
</name>
<name>
<surname>Trebicka</surname> <given-names>E</given-names>
</name>
<etal/>
</person-group>. <article-title>Increased Susceptibility of Melanin-Concentrating Hormone-Deficient Mice to Infection With Salmonella Enterica Serovar Typhimurium</article-title>. <source>Infect Immun</source> (<year>2013</year>) <volume>81</volume>(<issue>1</issue>):<page-range>166&#x2013;72</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1128/IAI.00572-12</pub-id>
</citation>
</ref>
<ref id="B16">
<label>16</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kawata</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Okuda</surname> <given-names>S</given-names>
</name>
<name>
<surname>Hotta</surname> <given-names>N</given-names>
</name>
<name>
<surname>Igawa</surname> <given-names>H</given-names>
</name>
<name>
<surname>Takahashi</surname> <given-names>M</given-names>
</name>
<name>
<surname>Ikoma</surname> <given-names>M</given-names>
</name>
<etal/>
</person-group>. <article-title>A Novel and Selective Melanin-Concentrating Hormone Receptor 1 Antagonist Ameliorates Obesity and Hepatic Steatosis in Diet-Induced Obese Rodent Models</article-title>. <source>Eur J Pharmacol</source> (<year>2017</year>) <volume>796</volume>:<fpage>45</fpage>&#x2013;<lpage>53</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.ejphar.2016.12.018</pub-id>
</citation>
</ref>
<ref id="B17">
<label>17</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mishra</surname> <given-names>S</given-names>
</name>
<name>
<surname>Shah</surname> <given-names>MI</given-names>
</name>
<name>
<surname>Udhaya Kumar</surname> <given-names>S</given-names>
</name>
<name>
<surname>Thirumal Kumar</surname> <given-names>D</given-names>
</name>
<name>
<surname>Gopalakrishnan</surname> <given-names>C</given-names>
</name>
<name>
<surname>Al-Subaie</surname> <given-names>AM</given-names>
</name>
<etal/>
</person-group>. <article-title>Network Analysis of Transcriptomics Data for the Prediction and Prioritization of Membrane-Associated Biomarkers for Idiopathic Pulmonary Fibrosis (IPF) by Bioinformatics Approach</article-title>. <source>Adv Protein Chem Struct Biol</source> (<year>2021</year>) <volume>123</volume>:<page-range>241&#x2013;73</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/bs.apcsb.2020.10.003</pub-id>
</citation>
</ref>
<ref id="B18">
<label>18</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Feghali</surname> <given-names>CA</given-names>
</name>
<name>
<surname>Wright</surname> <given-names>TM</given-names>
</name>
</person-group>. <article-title>Identification of Multiple, Differentially Expressed Messenger RNAs in Dermal Fibroblasts From Patients With Systemic Sclerosis</article-title>. <source>Arthritis Rheum</source> (<year>1999</year>) <volume>42</volume>(<issue>7</issue>):<page-range>1451&#x2013;7</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1002/1529-0131(199907)42:7&lt;1451::aid-anr19&gt;3.0.co;2-6</pub-id>
</citation>
</ref>
<ref id="B19">
<label>19</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Conte</surname> <given-names>E</given-names>
</name>
<name>
<surname>Fruciano</surname> <given-names>M</given-names>
</name>
<name>
<surname>Fagone</surname> <given-names>E</given-names>
</name>
<name>
<surname>Gili</surname> <given-names>E</given-names>
</name>
<name>
<surname>Caraci</surname> <given-names>F</given-names>
</name>
<name>
<surname>Iemmolo</surname> <given-names>M</given-names>
</name>
<etal/>
</person-group>. <article-title>Inhibition of PI3K Prevents the Proliferation and Differentiation of Human Lung Fibroblasts Into Myofibroblasts: The Role of Class I P110 Isoforms</article-title>. <source>PloS One</source> (<year>2011</year>) <volume>6</volume>(<issue>10</issue>):<fpage>e24663</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1371/journal.pone.0024663</pub-id>
</citation>
</ref>
<ref id="B20">
<label>20</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Asano</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Ihn</surname> <given-names>H</given-names>
</name>
<name>
<surname>Yamane</surname> <given-names>K</given-names>
</name>
<name>
<surname>Jinnin</surname> <given-names>M</given-names>
</name>
<name>
<surname>Mimura</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Tamaki</surname> <given-names>K</given-names>
</name>
</person-group>. <article-title>Phosphatidylinositol 3-Kinase Is Involved in Alpha2(I) Collagen Gene Expression in Normal and Scleroderma Fibroblasts</article-title>. <source>J Immunol (Baltimore Md: 1950)</source> (<year>2004</year>) <volume>172</volume>(<issue>11</issue>):<page-range>7123&#x2013;35</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.4049/jimmunol.172.11.7123</pub-id>
</citation>
</ref>
<ref id="B21">
<label>21</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chaki</surname> <given-names>S</given-names>
</name>
<name>
<surname>Funakoshi</surname> <given-names>T</given-names>
</name>
<name>
<surname>Hirota-Okuno</surname> <given-names>S</given-names>
</name>
<name>
<surname>Nishiguchi</surname> <given-names>M</given-names>
</name>
<name>
<surname>Shimazaki</surname> <given-names>T</given-names>
</name>
<name>
<surname>Iijima</surname> <given-names>M</given-names>
</name>
<etal/>
</person-group>. <article-title>Anxiolytic- and Antidepressant-Like Profile of ATC0065 and ATC0175: Nonpeptidic and Orally Active Melanin-Concentrating Hormone Receptor 1 Antagonists</article-title>. <source>J Pharmacol Exp Ther</source> (<year>2005</year>) <volume>313</volume>(<issue>2</issue>):<page-range>831&#x2013;9</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1124/jpet.104.081711</pub-id>
</citation>
</ref>
<ref id="B22">
<label>22</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mori</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Ishida</surname> <given-names>W</given-names>
</name>
<name>
<surname>Bhattacharyya</surname> <given-names>S</given-names>
</name>
<name>
<surname>Li</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Platanias</surname> <given-names>LC</given-names>
</name>
<name>
<surname>Varga</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>Selective Inhibition of Activin Receptor-Like Kinase 5 Signaling Blocks Profibrotic Transforming Growth Factor Beta Responses in Skin Fibroblasts</article-title>. <source>Arthritis Rheum</source> (<year>2004</year>) <volume>50</volume>(<issue>12</issue>):<page-range>4008&#x2013;21</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1002/art.20658</pub-id>
</citation>
</ref>
<ref id="B23">
<label>23</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Roberts</surname> <given-names>WG</given-names>
</name>
<name>
<surname>Whalen</surname> <given-names>PM</given-names>
</name>
<name>
<surname>Soderstrom</surname> <given-names>E</given-names>
</name>
<name>
<surname>Moraski</surname> <given-names>G</given-names>
</name>
<name>
<surname>Lyssikatos</surname> <given-names>JP</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>HF</given-names>
</name>
<etal/>
</person-group>. <article-title>Antiangiogenic and Antitumor Activity of a Selective PDGFR Tyrosine Kinase Inhibitor, CP-673,451</article-title>. <source>Cancer Res</source> (<year>2005</year>) <volume>65</volume>(<issue>3</issue>):<page-range>957&#x2013;66</page-range>.</citation>
</ref>
<ref id="B24">
<label>24</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shabestani Monfared</surname> <given-names>G</given-names>
</name>
<name>
<surname>Ertl</surname> <given-names>P</given-names>
</name>
<name>
<surname>Rothbauer</surname> <given-names>M</given-names>
</name>
</person-group>. <article-title>An on-Chip Wound Healing Assay Fabricated by Xurography for Evaluation of Dermal Fibroblast Cell Migration and Wound Closure</article-title>. <source>Sci Rep</source> (<year>2020</year>) <volume>10</volume>(<issue>1</issue>):<fpage>16192</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/s41598-020-73055-7</pub-id>
</citation>
</ref>
<ref id="B25">
<label>25</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Lu</surname> <given-names>W</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>X</given-names>
</name>
<name>
<surname>Lu</surname> <given-names>J</given-names>
</name>
<name>
<surname>Xu</surname> <given-names>S</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>S</given-names>
</name>
<etal/>
</person-group>. <article-title>Cryptotanshinone Protects Against Pulmonary Fibrosis Through Inhibiting Smad and STAT3 Signaling Pathways</article-title>. <source>Pharmacol Res</source> (<year>2019</year>) <volume>147</volume>:<elocation-id>104307</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.phrs.2019.104307</pub-id>
</citation>
</ref>
<ref id="B26">
<label>26</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xuan</surname> <given-names>L</given-names>
</name>
<name>
<surname>Han</surname> <given-names>F</given-names>
</name>
<name>
<surname>Gong</surname> <given-names>L</given-names>
</name>
<name>
<surname>Lv</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Wan</surname> <given-names>Z</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>H</given-names>
</name>
<etal/>
</person-group>. <article-title>Ceramide Induces MMP-9 Expression Through JAK2/STAT3 Pathway in Airway Epithelium</article-title>. <source>Lipids Health Dis</source> (<year>2020</year>) <volume>19</volume>(<issue>1</issue>):<fpage>196</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1186/s12944-020-01373-w</pub-id>
</citation>
</ref>
<ref id="B27">
<label>27</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Davis-Turak</surname> <given-names>J</given-names>
</name>
<name>
<surname>Courtney</surname> <given-names>SM</given-names>
</name>
<name>
<surname>Hazard</surname> <given-names>ES</given-names>
</name>
<name>
<surname>Glen</surname> <given-names>WB</given-names> <suffix>Jr</suffix>
</name>
<name>
<surname>da Silveira</surname> <given-names>WA</given-names>
</name>
<name>
<surname>Wesselman</surname> <given-names>T</given-names>
</name>
<etal/>
</person-group>. <article-title>Genomics Pipelines and Data Integration: Challenges and Opportunities in the Research Setting</article-title>. <source>Expert Rev Mol Diagn</source> (<year>2017</year>) <volume>17</volume>(<issue>3</issue>):<page-range>225&#x2013;37</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1080/14737159.2017.1282822</pub-id>
</citation>
</ref>
<ref id="B28">
<label>28</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Parmigiani</surname> <given-names>G</given-names>
</name>
<name>
<surname>Johnson</surname> <given-names>WE</given-names>
</name>
</person-group>. <article-title>ComBat-Seq: Batch Effect Adjustment for RNA-Seq Count Data</article-title>. <source>NAR Genom Bioinform</source> (<year>2020</year>) <volume>2</volume>(<issue>3</issue>):<elocation-id>lqaa078</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1093/nargab/lqaa078</pub-id>
</citation>
</ref>
<ref id="B29">
<label>29</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Love</surname> <given-names>MI</given-names>
</name>
<name>
<surname>Huber</surname> <given-names>W</given-names>
</name>
<name>
<surname>Anders</surname> <given-names>S</given-names>
</name>
</person-group>. <article-title>Moderated Estimation of Fold Change and Dispersion for RNA-Seq Data With Deseq2</article-title>. <source>Genome Biol</source> (<year>2014</year>) <volume>15</volume>(<issue>12</issue>):<elocation-id>550</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1186/s13059-014-0550-8</pub-id>
</citation>
</ref>
<ref id="B30">
<label>30</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ahsan</surname> <given-names>S</given-names>
</name>
<name>
<surname>Dr&#x103;ghici</surname> <given-names>S</given-names>
</name>
</person-group>. <article-title>Identifying Significantly Impacted Pathways and Putative Mechanisms With Ipathwayguide</article-title>. <source>Curr Protoc Bioinf</source> (<year>2017</year>) <volume>57</volume>:<page-range>7.15.1&#x2013;7.30</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1002/cpbi.24</pub-id>
</citation>
</ref>
<ref id="B31">
<label>31</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gallo-Oller</surname> <given-names>G</given-names>
</name>
<name>
<surname>Ordonez</surname> <given-names>R</given-names>
</name>
<name>
<surname>Dotor</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>A New Background Subtraction Method for Western Blot Densitometry Band Quantification Through Image Analysis Software</article-title>. <source>J Immunol Methods</source> (<year>2018</year>) <volume>457</volume>:<fpage>1</fpage>&#x2013;<lpage>5</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.jim.2018.03.004</pub-id>
</citation>
</ref>
<ref id="B32">
<label>32</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gassmann</surname> <given-names>M</given-names>
</name>
<name>
<surname>Grenacher</surname> <given-names>B</given-names>
</name>
<name>
<surname>Rohde</surname> <given-names>B</given-names>
</name>
<name>
<surname>Vogel</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>Quantifying Western Blots: Pitfalls of Densitometry</article-title>. <source>Electrophoresis</source> (<year>2009</year>) <volume>30</volume>(<issue>11</issue>):<page-range>1845&#x2013;55</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1002/elps.200800720</pub-id>
</citation>
</ref>
<ref id="B33">
<label>33</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pilewski</surname> <given-names>JM</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>L</given-names>
</name>
<name>
<surname>Henry</surname> <given-names>AC</given-names>
</name>
<name>
<surname>Knauer</surname> <given-names>AV</given-names>
</name>
<name>
<surname>Feghali-Bostwick</surname> <given-names>CA</given-names>
</name>
</person-group>. <article-title>Insulin-Like Growth Factor Binding Proteins 3 and 5 Are Overexpressed in Idiopathic Pulmonary Fibrosis and Contribute to Extracellular Matrix Deposition</article-title>. <source>Am J Pathol</source> (<year>2005</year>) <volume>166</volume>(<issue>2</issue>):<fpage>399</fpage>&#x2013;<lpage>407</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/s0002-9440(10)62263-8</pub-id>
</citation>
</ref>
<ref id="B34">
<label>34</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kosch&#xfc;tzki</surname> <given-names>D</given-names>
</name>
<name>
<surname>Schreiber</surname> <given-names>F</given-names>
</name>
</person-group>. <article-title>Centrality Analysis Methods for Biological Networks and Their Application to Gene Regulatory Networks</article-title>. <source>Gene Regul Syst Biol</source> (<year>2008</year>) <volume>2</volume>:<fpage>193</fpage>&#x2013;<lpage>201</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.4137/grsb.s702</pub-id>
</citation>
</ref>
<ref id="B35">
<label>35</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Varga</surname> <given-names>J</given-names>
</name>
<name>
<surname>Abraham</surname> <given-names>D</given-names>
</name>
</person-group>. <article-title>Systemic Sclerosis: A Prototypic Multisystem Fibrotic Disorder</article-title>. <source>J Clin Invest</source> (<year>2007</year>) <volume>117</volume>(<issue>3</issue>):<page-range>557&#x2013;67</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1172/JCI31139</pub-id>
</citation>
</ref>
<ref id="B36">
<label>36</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Coumans</surname> <given-names>B</given-names>
</name>
<name>
<surname>Grisar</surname> <given-names>T</given-names>
</name>
<name>
<surname>Nahon</surname> <given-names>JL</given-names>
</name>
<name>
<surname>Lakaye</surname> <given-names>B</given-names>
</name>
</person-group>. <article-title>Effect of ppMCH Derived Peptides on PBMC Proliferation and Cytokine Expression</article-title>. <source>Regul Pept</source> (<year>2007</year>) <volume>143</volume>(<issue>1-3</issue>):<page-range>104&#x2013;8</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.regpep.2007.04.001</pub-id>
</citation>
</ref>
<ref id="B37">
<label>37</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ashour</surname> <given-names>K</given-names>
</name>
<name>
<surname>Shan</surname> <given-names>L</given-names>
</name>
<name>
<surname>Lee</surname> <given-names>JH</given-names>
</name>
<name>
<surname>Schlicher</surname> <given-names>W</given-names>
</name>
<name>
<surname>Wada</surname> <given-names>K</given-names>
</name>
<name>
<surname>Wada</surname> <given-names>E</given-names>
</name>
<etal/>
</person-group>. <article-title>Bombesin Inhibits Alveolarization and Promotes Pulmonary Fibrosis in Newborn Mice</article-title>. <source>Am J Respir Crit Care Med</source> (<year>2006</year>) <volume>173</volume>(<issue>12</issue>):<page-range>1377&#x2013;85</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1164/rccm.200507-1014OC</pub-id>
</citation>
</ref>
<ref id="B38">
<label>38</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jiang</surname> <given-names>W</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>JM</given-names>
</name>
<name>
<surname>Luo</surname> <given-names>JH</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Pi</surname> <given-names>J</given-names>
</name>
<name>
<surname>Ma</surname> <given-names>XD</given-names>
</name>
<etal/>
</person-group>. <article-title>Airway Epithelial Integrin Beta4-Deficiency Exacerbates Lipopolysaccharide-Induced Acute Lung Injury</article-title>. <source>J Cell Physiol</source> (<year>2021</year>) <volume>236</volume>(<issue>11</issue>):<page-range>7711&#x2013;24</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1002/jcp.30422</pub-id>
</citation>
</ref>
<ref id="B39">
<label>39</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhong</surname> <given-names>J</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>HC</given-names>
</name>
<name>
<surname>Kon</surname> <given-names>V</given-names>
</name>
<name>
<surname>Fogo</surname> <given-names>AB</given-names>
</name>
<name>
<surname>Lawrence</surname> <given-names>DA</given-names>
</name>
<name>
<surname>Ma</surname> <given-names>J</given-names>
</name>
</person-group>. <article-title>Vitronectin-Binding PAI-1 Protects Against the Development of Cardiac Fibrosis Through Interaction With Fibroblasts</article-title>. <source>Lab Invest</source> (<year>2014</year>) <volume>94</volume>(<issue>6</issue>):<page-range>633&#x2013;44</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/labinvest.2014.51</pub-id>
</citation>
</ref>
<ref id="B40">
<label>40</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Coit</surname> <given-names>P</given-names>
</name>
<name>
<surname>Schollaert</surname> <given-names>KL</given-names>
</name>
<name>
<surname>Mirizio</surname> <given-names>EM</given-names>
</name>
<name>
<surname>Torok</surname> <given-names>KS</given-names>
</name>
<name>
<surname>Sawalha</surname> <given-names>AH</given-names>
</name>
</person-group>. <article-title>DNA Methylation Patterns in Juvenile Systemic Sclerosis and Localized Scleroderma</article-title>. <source>Clin Immunol</source> (<year>2021</year>) <volume>228</volume>:<elocation-id>108756</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.clim.2021.108756</pub-id>
</citation>
</ref>
<ref id="B41">
<label>41</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lis-&#x15a;wi&#x119;ty</surname> <given-names>A</given-names>
</name>
<name>
<surname>Gola</surname> <given-names>J</given-names>
</name>
<name>
<surname>Mazurek</surname> <given-names>U</given-names>
</name>
<name>
<surname>Brzezi&#x144;ska-Wcis&#x142;o</surname> <given-names>L</given-names>
</name>
</person-group>. <article-title>Transcriptional Activity of Nuclear Factor &#x3ba;b Family Genes in Patients With Systemic Sclerosis</article-title>. <source>Ann Clin Lab Sci</source> (<year>2017</year>) <volume>47</volume>(<issue>3</issue>):<page-range>306&#x2013;9</page-range>.</citation>
</ref>
<ref id="B42">
<label>42</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Watanabe</surname> <given-names>T</given-names>
</name>
<name>
<surname>Nishimoto</surname> <given-names>T</given-names>
</name>
<name>
<surname>Mlakar</surname> <given-names>L</given-names>
</name>
<name>
<surname>Heywood</surname> <given-names>J</given-names>
</name>
<name>
<surname>Malaab</surname> <given-names>M</given-names>
</name>
<name>
<surname>Hoffman</surname> <given-names>S</given-names>
</name>
<etal/>
</person-group>. <article-title>Optimization of a Murine and Human Tissue Model to Recapitulate Dermal and Pulmonary Features of Systemic Sclerosis</article-title>. <source>PloS One</source> (<year>2017</year>) <volume>12</volume>(<issue>6</issue>):<fpage>e0179917</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1371/journal.pone.0179917</pub-id>
</citation>
</ref>
<ref id="B43">
<label>43</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yamamoto</surname> <given-names>T</given-names>
</name>
<name>
<surname>Eckes</surname> <given-names>B</given-names>
</name>
<name>
<surname>Krieg</surname> <given-names>T</given-names>
</name>
</person-group>. <article-title>Bleomycin Increases Steady-State Levels of Type I Collagen, Fibronectin and Decorin mRNAs in Human Skin Fibroblasts</article-title>. <source>Arch Dermatol Res</source> (<year>2000</year>) <volume>292</volume>(<issue>11</issue>):<page-range>556&#x2013;61</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1007/s004030000180</pub-id>
</citation>
</ref>
<ref id="B44">
<label>44</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhu</surname> <given-names>L</given-names>
</name>
<name>
<surname>Gu</surname> <given-names>P</given-names>
</name>
<name>
<surname>Shen</surname> <given-names>H</given-names>
</name>
</person-group>. <article-title>Protective Effects of Berberine Hydrochloride on DSS-Induced Ulcerative Colitis in Rats</article-title>. <source>Int Immunopharmacol</source> (<year>2019</year>) <volume>68</volume>:<page-range>242&#x2013;51</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.intimp.2018.12.036</pub-id>
</citation>
</ref>
<ref id="B45">
<label>45</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Olson</surname> <given-names>LE</given-names>
</name>
<name>
<surname>Soriano</surname> <given-names>P</given-names>
</name>
</person-group>. <article-title>Increased PDGFRalpha Activation Disrupts Connective Tissue Development and Drives Systemic Fibrosis</article-title>. <source>Dev Cell</source> (<year>2009</year>) <volume>16</volume>(<issue>2</issue>):<page-range>303&#x2013;13</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.devcel.2008.12.003</pub-id>
</citation>
</ref>
<ref id="B46">
<label>46</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shi-wen</surname> <given-names>X</given-names>
</name>
<name>
<surname>Pennington</surname> <given-names>D</given-names>
</name>
<name>
<surname>Holmes</surname> <given-names>A</given-names>
</name>
<name>
<surname>Leask</surname> <given-names>A</given-names>
</name>
<name>
<surname>Bradham</surname> <given-names>D</given-names>
</name>
<name>
<surname>Beauchamp</surname> <given-names>JR</given-names>
</name>
<etal/>
</person-group>. <article-title>Autocrine Overexpression of CTGF Maintains Fibrosis: RDA Analysis of Fibrosis Genes in Systemic Sclerosis</article-title>. <source>Exp Cell Res</source> (<year>2000</year>) <volume>259</volume>(<issue>1</issue>):<page-range>213&#x2013;24</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1006/excr.2000.4972</pub-id>
</citation>
</ref>
<ref id="B47">
<label>47</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Orihara</surname> <given-names>K</given-names>
</name>
<name>
<surname>Morita</surname> <given-names>H</given-names>
</name>
<name>
<surname>Yagami</surname> <given-names>A</given-names>
</name>
<name>
<surname>Kajiwara</surname> <given-names>N</given-names>
</name>
<name>
<surname>Nakae</surname> <given-names>S</given-names>
</name>
<name>
<surname>Matsumoto</surname> <given-names>K</given-names>
</name>
<etal/>
</person-group>. <article-title>TH2 Cytokines Potently Induce an Appetite-Stimulating Peptide, Melanin-Concentrating Hormone, in Human Vascular Endothelial Cells</article-title>. <source>J Allergy Clin Immunol</source> (<year>2009</year>) <volume>124</volume>(<issue>3</issue>):<fpage>612</fpage>&#x2013;<lpage>4, 4.e1-2</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.jaci.2009.04.039</pub-id>
</citation>
</ref>
<ref id="B48">
<label>48</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gasparini</surname> <given-names>G</given-names>
</name>
<name>
<surname>Cozzani</surname> <given-names>E</given-names>
</name>
<name>
<surname>Parodi</surname> <given-names>A</given-names>
</name>
</person-group>. <article-title>Interleukin-4 and Interleukin-13 as Possible Therapeutic Targets in Systemic Sclerosis</article-title>. <source>Cytokine</source> (<year>2020</year>) <volume>125</volume>:<elocation-id>154799</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.cyto.2019.154799</pub-id>
</citation>
</ref>
<ref id="B49">
<label>49</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Delcourt</surname> <given-names>N</given-names>
</name>
<name>
<surname>Bockaert</surname> <given-names>J</given-names>
</name>
<name>
<surname>Marin</surname> <given-names>P</given-names>
</name>
</person-group>. <article-title>GPCR-Jacking: From a New Route in RTK Signalling to a New Concept in GPCR Activation</article-title>. <source>Trends Pharmacol Sci</source> (<year>2007</year>) <volume>28</volume>(<issue>12</issue>):<page-range>602&#x2013;7</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.tips.2007.09.007</pub-id>
</citation>
</ref>
<ref id="B50">
<label>50</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Akekawatchai</surname> <given-names>C</given-names>
</name>
<name>
<surname>Holland</surname> <given-names>JD</given-names>
</name>
<name>
<surname>Kochetkova</surname> <given-names>M</given-names>
</name>
<name>
<surname>Wallace</surname> <given-names>JC</given-names>
</name>
<name>
<surname>McColl</surname> <given-names>SR</given-names>
</name>
</person-group>. <article-title>Transactivation of CXCR4 by the Insulin-Like Growth Factor-1 Receptor (IGF-1R) in Human MDA-MB-231 Breast Cancer Epithelial Cells</article-title>. <source>J Biol Chem</source> (<year>2005</year>) <volume>280</volume>(<issue>48</issue>):<page-range>39701&#x2013;8</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1074/jbc.M509829200</pub-id>
</citation>
</ref>
<ref id="B51">
<label>51</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Waters</surname> <given-names>C</given-names>
</name>
<name>
<surname>Pyne</surname> <given-names>S</given-names>
</name>
<name>
<surname>Pyne</surname> <given-names>NJ</given-names>
</name>
</person-group>. <article-title>The Role of G-Protein Coupled Receptors and Associated Proteins in Receptor Tyrosine Kinase Signal Transduction</article-title>. <source>Semin Cell Dev Biol</source> (<year>2004</year>) <volume>15</volume>(<issue>3</issue>):<page-range>309&#x2013;23</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.semcdb.2003.12.020</pub-id>
</citation>
</ref>
<ref id="B52">
<label>52</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pakdel</surname> <given-names>F</given-names>
</name>
<name>
<surname>F&#xe9;on</surname> <given-names>S</given-names>
</name>
<name>
<surname>Le Gac</surname> <given-names>F</given-names>
</name>
<name>
<surname>Le Menn</surname> <given-names>F</given-names>
</name>
<name>
<surname>Valotaire</surname> <given-names>Y</given-names>
</name>
</person-group>. <article-title>
<italic>In Vivo</italic> Estrogen Induction of Hepatic Estrogen Receptor mRNA and Correlation With Vitellogenin mRNA in Rainbow Trout</article-title>. <source>Mol Cell Endocrinol</source> (<year>1991</year>) <volume>75</volume>(<issue>3</issue>):<page-range>205&#x2013;12</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/0303-7207(91)90162-l</pub-id>
</citation>
</ref>
<ref id="B53">
<label>53</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Menke</surname> <given-names>A</given-names>
</name>
<name>
<surname>Geerling</surname> <given-names>I</given-names>
</name>
<name>
<surname>Giehl</surname> <given-names>K</given-names>
</name>
<name>
<surname>Vogelmann</surname> <given-names>R</given-names>
</name>
<name>
<surname>Reinshagen</surname> <given-names>M</given-names>
</name>
<name>
<surname>Adler</surname> <given-names>G</given-names>
</name>
</person-group>. <article-title>Transforming Growth Factor-Beta-Induced Upregulation of Transforming Growth Factor-Beta Receptor Expression in Pancreatic Regeneration</article-title>. <source>Biochim Biophys Acta</source> (<year>1999</year>) <volume>1449</volume>(<issue>2</issue>):<page-range>178&#x2013;85</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/s0167-4889(99)00011-7</pub-id>
</citation>
</ref>
<ref id="B54">
<label>54</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Insel</surname> <given-names>PA</given-names>
</name>
<name>
<surname>Murray</surname> <given-names>F</given-names>
</name>
<name>
<surname>Yokoyama</surname> <given-names>U</given-names>
</name>
<name>
<surname>Romano</surname> <given-names>S</given-names>
</name>
<name>
<surname>Yun</surname> <given-names>H</given-names>
</name>
<name>
<surname>Brown</surname> <given-names>L</given-names>
</name>
<etal/>
</person-group>. <article-title>cAMP and Epac in the Regulation of Tissue Fibrosis</article-title>. <source>Br J Pharmacol</source> (<year>2012</year>) <volume>166</volume>(<issue>2</issue>):<page-range>447&#x2013;56</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1111/j.1476-5381.2012.01847.x</pub-id>
</citation>
</ref>
<ref id="B55">
<label>55</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lambers</surname> <given-names>C</given-names>
</name>
<name>
<surname>Roth</surname> <given-names>M</given-names>
</name>
<name>
<surname>Jaksch</surname> <given-names>P</given-names>
</name>
<name>
<surname>Murakozy</surname> <given-names>G</given-names>
</name>
<name>
<surname>Tamm</surname> <given-names>M</given-names>
</name>
<name>
<surname>Klepetko</surname> <given-names>W</given-names>
</name>
<etal/>
</person-group>. <article-title>Treprostinil Inhibits Proliferation and Extracellular Matrix Deposition by Fibroblasts Through cAMP Activation</article-title>. <source>Sci Rep</source> (<year>2018</year>) <volume>8</volume>(<issue>1</issue>):<fpage>1087</fpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/s41598-018-19294-1</pub-id>
</citation>
</ref>
<ref id="B56">
<label>56</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Horikawa</surname> <given-names>S</given-names>
</name>
<name>
<surname>Ishii</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Hamashima</surname> <given-names>T</given-names>
</name>
<name>
<surname>Yamamoto</surname> <given-names>S</given-names>
</name>
<name>
<surname>Mori</surname> <given-names>H</given-names>
</name>
<name>
<surname>Fujimori</surname> <given-names>T</given-names>
</name>
<etal/>
</person-group>. <article-title>PDGFRalpha Plays a Crucial Role in Connective Tissue Remodeling</article-title>. <source>Sci Rep</source> (<year>2015</year>) <volume>5</volume>:<elocation-id>17948</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/srep17948</pub-id>
</citation>
</ref>
<ref id="B57">
<label>57</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Choudhury</surname> <given-names>GG</given-names>
</name>
<name>
<surname>Marra</surname> <given-names>F</given-names>
</name>
<name>
<surname>Kiyomoto</surname> <given-names>H</given-names>
</name>
<name>
<surname>Abboud</surname> <given-names>HE</given-names>
</name>
</person-group>. <article-title>PDGF Stimulates Tyrosine Phosphorylation of JAK 1 Protein Tyrosine Kinase in Human Mesangial Cells</article-title>. <source>Kidney Int</source> (<year>1996</year>) <volume>49</volume>(<issue>1</issue>):<fpage>19</fpage>&#x2013;<lpage>25</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1038/ki.1996.3</pub-id>
</citation>
</ref>
<ref id="B58">
<label>58</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mallat</surname> <given-names>A</given-names>
</name>
<name>
<surname>Gallois</surname> <given-names>C</given-names>
</name>
<name>
<surname>Tao</surname> <given-names>J</given-names>
</name>
<name>
<surname>Habib</surname> <given-names>A</given-names>
</name>
<name>
<surname>Maclouf</surname> <given-names>J</given-names>
</name>
<name>
<surname>Mavier</surname> <given-names>P</given-names>
</name>
<etal/>
</person-group>. <article-title>Platelet-Derived Growth Factor-BB and Thrombin Generate Positive and Negative Signals for Human Hepatic Stellate Cell Proliferation. Role of a Prostaglandin/Cyclic AMP Pathway and Cross-Talk With Endothelin Receptors</article-title>. <source>J Biol Chem</source> (<year>1998</year>) <volume>273</volume>(<issue>42</issue>):<page-range>27300&#x2013;5</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1074/jbc.273.42.27300</pub-id>
</citation>
</ref>
<ref id="B59">
<label>59</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yao</surname> <given-names>J</given-names>
</name>
<name>
<surname>Kitamura</surname> <given-names>M</given-names>
</name>
<name>
<surname>Zhu</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Meng</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Kasai</surname> <given-names>A</given-names>
</name>
<name>
<surname>Hiramatsu</surname> <given-names>N</given-names>
</name>
<etal/>
</person-group>. <article-title>Synergistic Effects of PDGF-BB and cAMP-Elevating Agents on Expression of Connexin43 in Mesangial Cells</article-title>. <source>Am J Physiol Renal Physiol</source> (<year>2006</year>) <volume>290</volume>(<issue>5</issue>):<page-range>F1083&#x2013;93</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1152/ajprenal.00134.2005</pub-id>
</citation>
</ref>
<ref id="B60">
<label>60</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fitzpatrick JSS</surname> <given-names>LR</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>G</given-names>
</name>
</person-group>. <article-title>MCHR1 Antagonist Inhibit TNBS Induced Colitis 1-S2.0-S0016508509618503-Main.Pdf</article-title>. <source>Gastroenterlogy</source> (<year>2009</year>) <volume>136</volume>(<issue>5</issue>):<fpage>A</fpage>&#x2013;<lpage>403</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/S0016-5085(09)61850-3</pub-id>
</citation>
</ref>
<ref id="B61">
<label>61</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ziogas</surname> <given-names>DC</given-names>
</name>
<name>
<surname>Karagiannis</surname> <given-names>AK</given-names>
</name>
<name>
<surname>Geiger</surname> <given-names>BM</given-names>
</name>
<name>
<surname>Gras-Miralles</surname> <given-names>B</given-names>
</name>
<name>
<surname>Najarian</surname> <given-names>R</given-names>
</name>
<name>
<surname>Reizes</surname> <given-names>O</given-names>
</name>
<etal/>
</person-group>. <article-title>Inflammation-Induced Functional Connectivity of Melanin-Concentrating Hormone and IL-10</article-title>. <source>Peptides</source> (<year>2014</year>) <volume>55</volume>:<fpage>58</fpage>&#x2013;<lpage>64</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.peptides.2014.02.005</pub-id>
</citation>
</ref>
<ref id="B62">
<label>62</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Tritos</surname> <given-names>NA</given-names>
</name>
<name>
<surname>Vicent</surname> <given-names>D</given-names>
</name>
<name>
<surname>Gillette</surname> <given-names>J</given-names>
</name>
<name>
<surname>Ludwig</surname> <given-names>DS</given-names>
</name>
<name>
<surname>Flier</surname> <given-names>ES</given-names>
</name>
<name>
<surname>Maratos-Flier</surname> <given-names>E</given-names>
</name>
</person-group>. <article-title>Functional Interactions Between Melanin-Concentrating Hormone, Neuropeptide Y, and Anorectic Neuropeptides in the Rat Hypothalamus</article-title>. <source>Diabetes</source> (<year>1998</year>) <volume>47</volume>(<issue>11</issue>):<page-range>1687&#x2013;92</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.2337/diabetes.47.11.1687</pub-id>
</citation>
</ref>
<ref id="B63">
<label>63</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sanchez</surname> <given-names>M</given-names>
</name>
<name>
<surname>Baker</surname> <given-names>BI</given-names>
</name>
<name>
<surname>Celis</surname> <given-names>M</given-names>
</name>
</person-group>. <article-title>Melanin-Concentrating Hormone (MCH) Antagonizes the Effects of Alpha-MSH and Neuropeptide E-I on Grooming and Locomotor Activities in the Rat</article-title>. <source>Peptides</source> (<year>1997</year>) <volume>18</volume>(<issue>3</issue>):<page-range>393&#x2013;6</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/s0196-9781(96)00327-0</pub-id>
</citation>
</ref>
<ref id="B64">
<label>64</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bohm</surname> <given-names>M</given-names>
</name>
<name>
<surname>Raghunath</surname> <given-names>M</given-names>
</name>
<name>
<surname>Sunderkotter</surname> <given-names>C</given-names>
</name>
<name>
<surname>Schiller</surname> <given-names>M</given-names>
</name>
<name>
<surname>Stander</surname> <given-names>S</given-names>
</name>
<name>
<surname>Brzoska</surname> <given-names>T</given-names>
</name>
<etal/>
</person-group>. <article-title>Collagen Metabolism Is a Novel Target of the Neuropeptide Alpha-Melanocyte-Stimulating Hormone</article-title>. <source>J Biol Chem</source> (<year>2004</year>) <volume>279</volume>(<issue>8</issue>):<page-range>6959&#x2013;66</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1074/jbc.M312549200</pub-id>
</citation>
</ref>
<ref id="B65">
<label>65</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kokot</surname> <given-names>A</given-names>
</name>
<name>
<surname>Sindrilaru</surname> <given-names>A</given-names>
</name>
<name>
<surname>Schiller</surname> <given-names>M</given-names>
</name>
<name>
<surname>Sunderkotter</surname> <given-names>C</given-names>
</name>
<name>
<surname>Kerkhoff</surname> <given-names>C</given-names>
</name>
<name>
<surname>Eckes</surname> <given-names>B</given-names>
</name>
<etal/>
</person-group>. <article-title>Alpha-Melanocyte-Stimulating Hormone Suppresses Bleomycin-Induced Collagen Synthesis and Reduces Tissue Fibrosis in a Mouse Model of Scleroderma: Melanocortin Peptides as a Novel Treatment Strategy for Scleroderma</article-title>? <source>Arthritis Rheum</source> (<year>2009</year>) <volume>60</volume>(<issue>2</issue>):<fpage>592</fpage>&#x2013;<lpage>603</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1002/art.24228</pub-id>
</citation>
</ref>
<ref id="B66">
<label>66</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kayalar</surname> <given-names>O</given-names>
</name>
<name>
<surname>Oztay</surname> <given-names>F</given-names>
</name>
<name>
<surname>Ongen</surname> <given-names>HG</given-names>
</name>
</person-group>. <article-title>Gastrin-Releasing Peptide Induces Fibrotic Response in MRC5s and Proliferation in A549s</article-title>. <source>Cell Commun Signal</source> (<year>2020</year>) <volume>18</volume>(<issue>1</issue>):<elocation-id>96</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.1186/s12964-020-00585-y</pub-id>
</citation>
</ref>
<ref id="B67">
<label>67</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Clarimundo</surname> <given-names>VS</given-names>
</name>
<name>
<surname>Farinon</surname> <given-names>M</given-names>
</name>
<name>
<surname>Pedo</surname> <given-names>RT</given-names>
</name>
<name>
<surname>Teixeira</surname> <given-names>VON</given-names>
</name>
<name>
<surname>Nor</surname> <given-names>C</given-names>
</name>
<name>
<surname>Gulko</surname> <given-names>PS</given-names>
</name>
<etal/>
</person-group>. <article-title>Gastrin-Releasing Peptide and Its Receptor Increase Arthritis Fibroblast-Like Synoviocytes Invasiveness Through Activating the PI3K/AKT Pathway</article-title>. <source>Peptides</source> (<year>2017</year>) <volume>95</volume>:<fpage>57</fpage>&#x2013;<lpage>61</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.peptides.2017.07.008</pub-id>
</citation>
</ref>
<ref id="B68">
<label>68</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Elliott</surname> <given-names>JC</given-names>
</name>
<name>
<surname>Harrold</surname> <given-names>JA</given-names>
</name>
<name>
<surname>Brodin</surname> <given-names>P</given-names>
</name>
<name>
<surname>Enquist</surname> <given-names>K</given-names>
</name>
<name>
<surname>B&#xe4;ckman</surname> <given-names>A</given-names>
</name>
<name>
<surname>Bystr&#xf6;m</surname> <given-names>M</given-names>
</name>
<etal/>
</person-group>. <article-title>Increases in Melanin-Concentrating Hormone and MCH Receptor Levels in the Hypothalamus of Dietary-Obese Rats</article-title>. <source>Brain Res Mol Brain Res</source> (<year>2004</year>) <volume>128</volume>(<issue>2</issue>):<page-range>150&#x2013;9</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.molbrainres.2004.06.010</pub-id>
</citation>
</ref>
<ref id="B69">
<label>69</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Long</surname> <given-names>Y</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>W</given-names>
</name>
<name>
<surname>Du</surname> <given-names>Q</given-names>
</name>
<name>
<surname>Zuo</surname> <given-names>X</given-names>
</name>
<name>
<surname>Zhu</surname> <given-names>H</given-names>
</name>
</person-group>. <article-title>Ubiquitination in Scleroderma Fibrosis and Its Treatment</article-title>. <source>Front Immunol</source> (<year>2018</year>) <volume>9</volume>:<elocation-id>2383</elocation-id>. doi:&#xa0;<pub-id pub-id-type="doi">10.3389/fimmu.2018.02383</pub-id>
</citation>
</ref>
<ref id="B70">
<label>70</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Meiners</surname> <given-names>S</given-names>
</name>
<name>
<surname>Evankovich</surname> <given-names>J</given-names>
</name>
<name>
<surname>Mallampalli</surname> <given-names>RK</given-names>
</name>
</person-group>. <article-title>The Ubiquitin Proteasome System as a Potential Therapeutic Target for Systemic Sclerosis</article-title>. <source>Transl Res</source> (<year>2018</year>) <volume>198</volume>:<fpage>17</fpage>&#x2013;<lpage>28</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1016/j.trsl.2018.03.003</pub-id>
</citation>
</ref>
<ref id="B71">
<label>71</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sugg</surname> <given-names>KB</given-names>
</name>
<name>
<surname>Markworth</surname> <given-names>JF</given-names>
</name>
<name>
<surname>Disser</surname> <given-names>NP</given-names>
</name>
<name>
<surname>Rizzi</surname> <given-names>AM</given-names>
</name>
<name>
<surname>Talarek</surname> <given-names>JR</given-names>
</name>
<name>
<surname>Sarver</surname> <given-names>DC</given-names>
</name>
<etal/>
</person-group>. <article-title>Postnatal Tendon Growth and Remodeling Require Platelet-Derived Growth Factor Receptor Signaling</article-title>. <source>Am J Physiol Cell Physiol</source> (<year>2018</year>) <volume>314</volume>(<issue>4</issue>):<fpage>C389</fpage>&#x2013;<lpage>c403</lpage>. doi:&#xa0;<pub-id pub-id-type="doi">10.1152/ajpcell.00258.2017</pub-id>
</citation>
</ref>
<ref id="B72">
<label>72</label>
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>David</surname> <given-names>DJ</given-names>
</name>
<name>
<surname>Klemenhagen</surname> <given-names>KC</given-names>
</name>
<name>
<surname>Holick</surname> <given-names>KA</given-names>
</name>
<name>
<surname>Saxe</surname> <given-names>MD</given-names>
</name>
<name>
<surname>Mendez</surname> <given-names>I</given-names>
</name>
<name>
<surname>Santarelli</surname> <given-names>L</given-names>
</name>
<etal/>
</person-group>. <article-title>Efficacy of the MCHR1 Antagonist N-[3-(1-{[4-(3,4-Difluorophenoxy)Phenyl]Methyl}(4-Piperidyl))-4-Methylphenyl]-2-M Ethylpropanamide (SNAP 94847) in Mouse Models of Anxiety and Depression Following Acute and Chronic Administration Is Independent of Hippocampal Neurogenesis</article-title>. <source>J Pharmacol Exp Ther</source> (<year>2007</year>) <volume>321</volume>(<issue>1</issue>):<page-range>237&#x2013;48</page-range>. doi:&#xa0;<pub-id pub-id-type="doi">10.1124/jpet.106.109678</pub-id>
</citation>
</ref>
</ref-list>
</back>
</article>