<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" "journalpublishing.dtd">
<article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" article-type="correction" dtd-version="2.3" xml:lang="EN">
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Immunol.</journal-id>
<journal-title>Frontiers in Immunology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Immunol.</abbrev-journal-title>
<issn pub-type="epub">1664-3224</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fimmu.2021.790557</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Immunology</subject>
<subj-group>
<subject>Correction</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Corrigendum: Spatial Organization and Recruitment of Non-Specific T Cells May Limit T Cell-Macrophage Interactions Within&#xa0;<italic>Mycobacterium tuberculosis</italic>&#xa0;Granulomas</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Millar</surname>
<given-names>Jess A.</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/224978"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Butler</surname>
<given-names>J. Russell</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1179941"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Evans</surname>
<given-names>Stephanie</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1117140"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Grant</surname>
<given-names>Nicole L.</given-names>
</name>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
<xref ref-type="aff" rid="aff6">
<sup>6</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1535852"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Mattila</surname>
<given-names>Joshua T.</given-names>
</name>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/153444"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Linderman</surname>
<given-names>Jennifer J.</given-names>
</name>
<xref ref-type="aff" rid="aff7">
<sup>7</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/44471"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Flynn</surname>
<given-names>JoAnne L.</given-names>
</name>
<xref ref-type="aff" rid="aff6">
<sup>6</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/542548"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Kirschner</surname>
<given-names>Denise E.</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/86904"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Department of Epidemiology, University of Michigan</institution>, <addr-line>Ann Arbor, MI</addr-line>, <country>United States</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Department of Computational Medicine and Bioinformatics, University of Michigan</institution>, <addr-line>Ann Arbor, MI</addr-line>, <country>United States</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Department of Health and Biomedical Sciences, AdventHealth University</institution>, <addr-line>Orlando, FL</addr-line>, <country>United States</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Department of Microbiology and Immunology, University of Michigan Medical School</institution>, <addr-line>Ann Arbor, MI</addr-line>, <country>United States</country>
</aff>
<aff id="aff5">
<sup>5</sup>
<institution>Department of Infectious Diseases and Microbiology, University of Pittsburgh</institution>, <addr-line>Pittsburgh, PA</addr-line>, <country>United States</country>
</aff>
<aff id="aff6">
<sup>6</sup>
<institution>Department of Chemical Engineering, University of Michigan</institution>, <addr-line>Ann Arbor, MI</addr-line>, <country>United States</country>
</aff>
<aff id="aff7">
<sup>7</sup>
<institution>Department of Microbiology and Molecular Genetics and the Center for Vaccine Research, University of Pittsburgh</institution>, <addr-line>Pittsburgh, PA</addr-line>, <country>United States</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Approved by: Frontiers Editorial Office, Frontiers Media SA, Switzerland</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Denise E. Kirschner, <email xlink:href="mailto:kirschner@umich.edu">kirschner@umich.edu</email>
</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to T Cell Biology, a section of the journal Frontiers in Immunology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>22</day>
<month>11</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>12</volume>
<elocation-id>790557</elocation-id>
<history>
<date date-type="received">
<day>06</day>
<month>10</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>28</day>
<month>10</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2021 Millar, Butler, Evans, Grant, Mattila, Linderman, Flynn and Kirschner</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Millar, Butler, Evans, Grant, Mattila, Linderman, Flynn and Kirschner</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use,&#xa0;distribution or reproduction in&#xa0;other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<related-article id="RA1" related-article-type="corrected-article" xlink:href="10.3389/fimmu.2020.613638" ext-link-type="doi">A Corrigendum on: <article-title>Spatial Organization and Recruitment of Non-Specific T Cells May Limit T Cell-Macrophage Interactions Within <italic>Mycobacterium tuberculosis</italic> Granulomas</article-title> By Millar JA, Butler JR, Evans S, Grant NL, Mattila JT, Linderman JJ, Flynn JL and Kirschner DE (2021). Front. Immunol. 11:613638. doi:&#xa0;<object-id>10.3389/fimmu.2020.613638</object-id>
</related-article>
<kwd-group>
<kwd>T cell</kwd>
<kwd>macrophage</kwd>
<kwd>
<italic>Mycobacterium tuberculosis</italic>
</kwd>
<kwd>lung</kwd>
<kwd>computational model</kwd>
<kwd>granuloma</kwd>
</kwd-group>
<counts>
<fig-count count="1"/>
<table-count count="1"/>
<equation-count count="0"/>
<ref-count count="0"/>
<page-count count="2"/>
<word-count count="880"/>
</counts>
</article-meta>
</front>
<body>
<p>In the original article, there was a mistake in <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref> as published. The original image included cell types not referenced in the paper and data from an analysis was not included in the paper. The corrected <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref> legend appears below.</p>
<p>&#x201C;Immunohistochemistry analysis of four non-human primates (NHP) granulomas [shown in Panels&#xa0;<bold>(A&#x2013;D)</bold>] examining spatial distributions of both T cells and macrophages, and also where they intersect. Four distinct, randomly chosen granuloma images with extracted cell distributions. Column 1 shows the immunohistochemically stained preparation for CD3 (green), CD11c+ macrophages (red), and nuclei (dark blue). White points represent Geographical Information Systems Technology (GIS) analyses of these images revealing cell locations for T cells (Column 2), macrophages (Column 3), and their intersections (Column 4), as follows. Rows represent four distinct granulomas. The data for the cell numbers in these granulomas are given in <xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>. On average, about 9.75% (median 8.6%, StDev is 4.5%) of T cells interacted with macrophages.&#x201D;</p>
<p>In the original article, there was a mistake in <xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref> as published. The original image included data from an analysis of cell types not described in this publication and non-standard non-human primate identification numbers. The corrected <xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref> appears below.</p>
<p>For the four IHC images of granulomas analyzed in <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>, we used GIS to count the T Cells (CD3) and macrophages (CD11c), cell distributions and their ratios. We also identified where the two cell types intersected. Intersections are defined as cell boundaries that touched or overlapped on the IHC image.</p>
<p>Nicole L. Grant was not included as an author in the published article. The corrected <bold>Author Contributions Statement</bold> appears below.</p>
<p>&#x201C;DK, JF, and JL designed the study. NLG, JTM, SE, and JF carried out the experiments. JAM and JB analyzed the data. JAM and DK drafted the manuscript. All authors contributed to the article and approved the submitted version.&#x201D;</p>
<p>In the original article, there was an error. In the <bold>Methods</bold> section, the number of macaques that the granulomas in <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref> were obtained from and their weeks post-infection were incorrectly included, antibodies for a cell type not analyzed in this study were included, and a microscope that used for imaging was excluded. A correction has been made to <bold>Methods</bold>, <bold>Immunohistochemistry and Imaging</bold>, paragraph 1:</p>
<p>&#x201c;Four randomly selected, formalin fixed paraffin embedded (FFPE) granulomas were derived from 3 cynomolgus macaques (<italic>Macaca fascicularis</italic>), necropsied at approx. 10-11 weeks post infection (<xref ref-type="fig" rid="f1">
<bold>Figures&#xa0;1A&#x2013;D</bold>
</xref>), and were deparaffinized and antigen retrieval was performed as previously indicated (35). Granulomas were stained with cocktails of antibodies including polyclonal rabbit anti-CD3 (Agilent Technologies, Santa Clara, CA), IgG2a mouse anti-CD11c (clone 5D11; Leica Microsystems, Buffalo Grove, IL). Primary antibodies were labeled with fluorochrome-labeled secondaries including anti-isotype (IgG2a) specific antibodies (Jackson ImmunoResearch, West Grove, PA). Coverslips were mounted with Prolong Gold with DAPI (ThermoFisher Scientific) and the sections were imaged on an Olympus FluoView confocal microscope (Center Valley, PA) or Nikon e1000 epifluorescence microscope (Nikon Instruments, Melville, NY) with Nikon NIS Elements (Nikon Instruments).&#x201d;</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Immunohistochemistry analysis of four non-human primates (NHP) granulomas [shown in Panels <bold>(A&#x2013;D)</bold>] examining spatial distributions of both T cells and macrophages, and also where they intersect. Four distinct, randomly chosen granuloma images with extracted cell distributions. Column 1 shows the immunohistochemically stained preparation for CD3 (green), CD11c+ macrophages (red), and nuclei (dark blue). White points represent Geographical Information Systems Technology (GIS) analyses of these images revealing cell locations for T cells (Column 2), macrophages (Column 3), and their intersections (Column 4), as follows. Rows represent four distinct granulomas. The data for the cell numbers in these granulomas are given in Table 2. On average, about 9.75% (median 8.6%, StDev is 4.5%) of T cells interacted with macrophages.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fimmu-12-790557-g001.tif"/>
</fig>
<p>In the <bold>Results</bold> section, we included a statistic for a cell type not analyzed in this study. A correction has been made to <bold>Results, Hypothesis 2: Spatial Organization of Granulomas Affects the Ability of T Cells to Reach Macrophages and Thus Be Activated&#xa0;Via&#xa0;Antigen Presentation</bold>, paragraph 2:</p>
<p>&#x201C;We found that T cell-macrophage interactions occurred for, on average, only about 9.75% of the T cells identified (median: 8.6%, StDev: 4.5%), for at least the four granuloma that we examined (See&#xa0;<xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref>).&#x201D;</p>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Geographical Information Systems Technology (GIS) analysis identifies numbers of cells of two types, and numbers of contacts from four immunohistochemistry (IHC) granulomas.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="left">Granuloma</th>
<th valign="top" align="center">CD3</th>
<th valign="top" align="center">CD11c</th>
<th valign="top" align="center">CD3/CD11c</th>
<th valign="top" align="center">Ratio contacts to T cells</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">9714_30</td>
<td valign="top" align="center">4,969</td>
<td valign="top" align="center">9,876</td>
<td valign="top" align="center">491</td>
<td valign="top" align="center">0.098</td>
</tr>
<tr>
<td valign="top" align="left">17613_37</td>
<td valign="top" align="center">15,448</td>
<td valign="top" align="center">3,943</td>
<td valign="top" align="center">1,127</td>
<td valign="top" align="center">0.073</td>
</tr>
<tr>
<td valign="top" align="left">17613_51</td>
<td valign="top" align="center">8,612</td>
<td valign="top" align="center">4,496</td>
<td valign="top" align="center">1,397</td>
<td valign="top" align="center">0.162</td>
</tr>
<tr>
<td valign="top" align="left">20612_29</td>
<td valign="top" align="center">3,284</td>
<td valign="top" align="center">5,535</td>
<td valign="top" align="center">197</td>
<td valign="top" align="center">0.060</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>The authors apologize for these errors and state that they do not change the scientific conclusions of the article in any way. The original article has been updated.</p>
<sec id="s1" sec-type="disclaimer">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
</body>
</article>