<?xml version="1.0" encoding="UTF-8"?>
<!DOCTYPE article PUBLIC "-//NLM//DTD Journal Publishing DTD v2.3 20070202//EN" "journalpublishing.dtd">
<article article-type="research-article" dtd-version="2.3" xml:lang="EN" xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink">
<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mech. Eng</journal-id>
<journal-title>Frontiers in Mechanical Engineering</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mech. Eng</abbrev-journal-title>
<issn pub-type="epub">2297-3079</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">708350</article-id>
<article-id pub-id-type="doi">10.3389/fmech.2021.708350</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Mechanical Engineering</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Poro-Viscoelastic Effects During Biomechanical Testing of Human Brain Tissue</article-title>
<alt-title alt-title-type="left-running-head">Greiner et&#x20;al.</alt-title>
<alt-title alt-title-type="right-running-head">Poro-Viscoelasticity of Human Brain Tissue</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Greiner</surname>
<given-names>Alexander</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1412344/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Reiter</surname>
<given-names>Nina</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1335671/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Paulsen</surname>
<given-names>Friedrich</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1117354/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Holzapfel</surname>
<given-names>Gerhard A.</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/257552/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Steinmann</surname>
<given-names>Paul</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff6">
<sup>6</sup>
</xref>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Comellas</surname>
<given-names>Ester</given-names>
</name>
<xref ref-type="aff" rid="aff7">
<sup>7</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1332800/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Budday</surname>
<given-names>Silvia</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/914099/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<label>
<sup>1</sup>
</label>Department Mechanical Engineering, Institute of Applied Mechanics, Friedrich-Alexander-University Erlangen-N&#xfc;rnberg, <addr-line>Erlangen</addr-line>, <country>Germany</country>
</aff>
<aff id="aff2">
<label>
<sup>2</sup>
</label>Institute of Functional and Clinical Anatomy, Friedrich-Alexander-University Erlangen-N&#xfc;rnberg, <addr-line>Erlangen</addr-line>, <country>Germany</country>
</aff>
<aff id="aff3">
<label>
<sup>3</sup>
</label>Department of Operative Surgery and Topographic Anatomy, Sechenov University, <addr-line>Moscow</addr-line>, <country>Russia</country>
</aff>
<aff id="aff4">
<label>
<sup>4</sup>
</label>Institute of Biomechanics, Graz University of Technology, <addr-line>Graz</addr-line>, <country>Austria</country>
</aff>
<aff id="aff5">
<label>
<sup>5</sup>
</label>Department of Structural Engineering, Norwegian University of Science and Technology (NTNU), <addr-line>Trondheim</addr-line>, <country>Norway</country>
</aff>
<aff id="aff6">
<label>
<sup>6</sup>
</label>Glasgow Computational Engineering Centre, University of Glasgow, <addr-line>Glasgow</addr-line>, <country>United&#x20;Kingdom</country>
</aff>
<aff id="aff7">
<label>
<sup>7</sup>
</label>Serra H&#xfa;nter Fellow, Department of Physics, Laboratori de C&#xe0;lcul Num&#xe9;ric (LaC&#xe0;N), Universitat Polit&#xe8;cnica de Catalunya (UPC), <addr-line>Barcelona</addr-line>, <country>Spain</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1189213/overview">Hanxing Zhu</ext-link>, Cardiff University, United&#x20;Kingdom</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1117366/overview">Ralph Sinkus</ext-link>, INSERM U1148 Laboratoire de Recherche Vasculaire Translationnelle, France</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/73410/overview">Alessio Gizzi</ext-link>, Campus Bio-Medico University, Italy</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1343426/overview">Shan Tang</ext-link>, Dalian University of Technology, China</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Ester Comellas, <email>ester.comellas@upc.edu</email>; Silvia Budday, <email>silvia.budday@fau.de</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Biomechanical Engineering, a section of the journal Frontiers in Mechanical Engineering</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>17</day>
<month>08</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>7</volume>
<elocation-id>708350</elocation-id>
<history>
<date date-type="received">
<day>11</day>
<month>05</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>03</day>
<month>08</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2021 Greiner, Reiter, Paulsen, Holzapfel, Steinmann, Comellas and Budday.</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Greiner, Reiter, Paulsen, Holzapfel, Steinmann, Comellas and Budday</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these&#x20;terms.</p>
</license>
</permissions>
<abstract>
<p>Brain tissue is one of the softest tissues in the human body and the quantification of its mechanical properties has challenged scientists over the past decades. Associated experimental results in the literature have been contradictory as characterizing the mechanical response of brain tissue not only requires well-designed experimental setups that can record the ultrasoft response, but also appropriate approaches to analyze the corresponding data. Due to the extreme complexity of brain tissue behavior, nonlinear continuum mechanics has proven an expedient tool to analyze testing data and predict the mechanical response using a combination of hyper-, visco-, or poro-elastic models. Such models can not only allow for personalized predictions through finite element simulations, but also help to comprehensively understand the physical mechanisms underlying the tissue response. Here, we use a nonlinear poro-viscoelastic computational model to evaluate the effect of different intrinsic material properties (permeability, shear moduli, nonlinearity, viscosity) on the tissue response during different quasi-static biomechanical measurements, i.e.,&#x20;large-strain compression and tension as well as indentation experiments. We show that not only the permeability but also the properties of the viscoelastic solid largely control the fluid flow within and out of the sample. This reveals the close coupling between viscous and porous effects in brain tissue behavior. Strikingly, our simulations can explain why indentation experiments yield that white matter tissue in the human brain is stiffer than gray matter, while large-strain compression experiments show the opposite trend. These observations can be attributed to different experimental loading and boundary conditions as well as assumptions made during data analysis. The present study provides an important step to better understand experimental data previously published in the literature and can help to improve experimental setups and data analysis for biomechanical testing of brain tissue in the future.</p>
</abstract>
<kwd-group>
<kwd>human brain</kwd>
<kwd>viscoelasticity</kwd>
<kwd>poroelasticity</kwd>
<kwd>constitutive modeling</kwd>
<kwd>mechanical properties</kwd>
<kwd>biomechanical testing</kwd>
<kwd>indentation</kwd>
<kwd>finite element analysis</kwd>
</kwd-group>
<contract-num rid="cn001">BU 3728/1-1 BU 3728/3-1 STE 544/70-1 PA 738/15-1</contract-num>
<contract-num rid="cn002">MSCA-GF-2018-841047</contract-num>
<contract-sponsor id="cn001">Deutsche Forschungsgemeinschaft<named-content content-type="fundref-id">10.13039/501100001659</named-content>
</contract-sponsor>
<contract-sponsor id="cn002">H2020 Marie Sk&#x142;odowska-Curie Actions<named-content content-type="fundref-id">10.13039/100010665</named-content>
</contract-sponsor>
</article-meta>
</front>
<body>
<sec id="s1">
<title>1 Introduction</title>
<p>In recent years, it has increasingly been recognized that mechanical signals play an important role for brain development (<xref ref-type="bibr" rid="B10">Budday et&#x20;al., 2015b</xref>; <xref ref-type="bibr" rid="B33">Koser et&#x20;al., 2016</xref>; <xref ref-type="bibr" rid="B51">Thompson et&#x20;al., 2019</xref>), injury (<xref ref-type="bibr" rid="B38">Meaney et&#x20;al., 2014</xref>; <xref ref-type="bibr" rid="B28">Hemphill et&#x20;al., 2015</xref>; <xref ref-type="bibr" rid="B31">Keating and Cullen, 2021</xref>), and disease (<xref ref-type="bibr" rid="B43">Murphy et&#x20;al., 2016</xref>; <xref ref-type="bibr" rid="B3">Barnes et&#x20;al., 2017</xref>; <xref ref-type="bibr" rid="B24">Gerischer et&#x20;al., 2018</xref>; <xref ref-type="bibr" rid="B45">Park et&#x20;al., 2018</xref>). In silico modeling based on the theory of nonlinear continuum mechanics has therefore proven a valuable tool to, on the one hand, computationally test hypotheses that complement experimental studies and provide a predictive understanding of processes in the brain under physiological and pathological conditions (<xref ref-type="bibr" rid="B25">Goriely et&#x20;al., 2015</xref>; <xref ref-type="bibr" rid="B6">Budday et&#x20;al., 2020</xref>). On the other hand, computational modeling can assist diagnosis and treatment of neurological disorders through personalized predictions (<xref ref-type="bibr" rid="B1">Angeli and Stylianopoulos, 2016</xref>; <xref ref-type="bibr" rid="B35">Lytton et&#x20;al., 2017</xref>; <xref ref-type="bibr" rid="B53">Weickenmeier et&#x20;al., 2017</xref>).</p>
<p>A major challenge when aiming to explore the role of brain mechanics in health and disease is reliably quantifying the mechanical properties of brain tissue. Brain tissue is ultrasoft&#x2014;arguably softer than any other tissue in the human body&#x2014;and deforms noticeably when it is taken out of its physiological environment within the skull, e.g., for <italic>ex vivo</italic> mechanical testing. In addition, it has an exceptionally high water content, 0.83&#xa0;g/ml in gray matter and 0.71&#xa0;g/ml in white matter (<xref ref-type="bibr" rid="B54">Whittall et&#x20;al., 1997</xref>). From the total of about 80% water, approximately 20&#x2013;40% is free-flowing cerebrospinal fluid, while the rest resides inside the cells. The extreme softness and biphasic nature of brain tissue pushes mechanical testing and modeling approaches to their limits. Early studies had therefore significantly overestimated the stiffness of brain tissue (<xref ref-type="bibr" rid="B22">Galford and McElhaney, 1970</xref>; <xref ref-type="bibr" rid="B12">Chatelin et&#x20;al., 2010</xref>), but more recent studies indicate that the stiffness lies on the order of 1&#xa0;kPa (<xref ref-type="bibr" rid="B6">Budday et&#x20;al., 2020</xref>). Still, the exact values have varied notably depending on the testing setup (<xref ref-type="bibr" rid="B12">Chatelin et&#x20;al., 2010</xref>; <xref ref-type="bibr" rid="B6">Budday et&#x20;al., 2020</xref>). It is thus difficult to control specimen geometry, local deformation states, and their relation to the recorded forces (<xref ref-type="bibr" rid="B48">Rashid et&#x20;al., 2012</xref>).</p>
<p>Partially, the observed discrepancies can be attributed to the fact that different testing techniques measure the properties on different length scales (cell, tissue, organ) and different time scales (quasistatic, dynamic). But even on a seemingly similar spatial and temporal resolution, experimental observations may differ, both qualitatively and quantitatively. For instance, gray matter shows a stiffer response than white matter during large-strain compression, tension, and shear experiments (<xref ref-type="bibr" rid="B7">Budday et&#x20;al., 2017a</xref>), while one observes the opposite regional trends during tissue-scale indentation (<xref ref-type="bibr" rid="B52">Van Dommelen et&#x20;al., 2010</xref>; <xref ref-type="bibr" rid="B5">Budday et&#x20;al., 2015a</xref>). Here, we hypothesize that these observations may be attributed to different boundary and drainage conditions in combination with the biphasic, poro-viscoelastic nature of brain tissue (<xref ref-type="bibr" rid="B21">Franceschini et&#x20;al., 2006</xref>; <xref ref-type="bibr" rid="B16">Comellas et&#x20;al., 2020</xref>). Depending on the testing setup, the fluid is trapped within the tissue or free to escape, which may largely affect the recorded reaction forces. Therefore, realistic computational predictions and the profound understanding of brain tissue behavior require sophisticated mechanical models that capture the complex and unique characteristics of this ultrasoft and biphasic tissue.</p>
<p>Several poroelastic models have been proposed to reproduce the biphasic nature of brain tissue, but with specific applications in mind, e.g., drug delivery (<xref ref-type="bibr" rid="B19">Ehlers and Wagner, 2015</xref>), hydrocephalus (<xref ref-type="bibr" rid="B32">Kim et&#x20;al., 2015</xref>), tumor growth and treatment (<xref ref-type="bibr" rid="B1">Angeli and Stylianopoulos, 2016</xref>), decompressive craniotomy (<xref ref-type="bibr" rid="B20">Fletcher et&#x20;al., 2016</xref>), or tissue fracture (<xref ref-type="bibr" rid="B50">Terzano et&#x20;al., 2021</xref>). Early numerical studies that specifically focused on elucidating the mechanisms behind the observed mechanical properties of brain tissue studied its nonlinear ultrasoft viscous behavior without incorporating the biphasic nature of the tissue (<xref ref-type="bibr" rid="B4">Bilston et&#x20;al., 2001</xref>; <xref ref-type="bibr" rid="B47">Prevost et&#x20;al., 2011</xref>; <xref ref-type="bibr" rid="B8">Budday et&#x20;al., 2017b</xref>,<xref ref-type="bibr" rid="B9">c</xref>).</p>
<p>Initial models incorporating both porous and viscous responses aimed at fitting a single experimental setup (<xref ref-type="bibr" rid="B15">Cheng and Bilston, 2007</xref>) or included important analytical simplifications and were tailored to particular applications related to cerebrospinal fluid circulation (<xref ref-type="bibr" rid="B39">Mehrabian and Abousleiman, 2011</xref>; <xref ref-type="bibr" rid="B27">Hasan and Drapaca, 2015</xref>; <xref ref-type="bibr" rid="B40">Mehrabian et&#x20;al., 2015</xref>). To our knowledge, the formulation proposed by our group (<xref ref-type="bibr" rid="B16">Comellas et&#x20;al., 2020</xref>) and the model described by <xref ref-type="bibr" rid="B29">Hosseini-Farid et&#x20;al. (2020)</xref> are the only approaches to date with the potential of capturing the wide range of characteristics observed in the response of brain tissue under different biomechanical loading scenarios.</p>
<p>In this study, we use a finite poro-viscoelastic model to evaluate the individual porous and viscous contributions in numerical simulations of quasi-static unconfined compression and tension as well as indentation experiments (with loading frequencies on the order of 0.01&#xa0;Hz). Through systematic parameter studies, we identify parameter ranges that can explain the phenomenon observed when comparing the mechanical properties of gray and white matter brain tissue, where indentation yields the opposite regional trend than large-strain compression experiments. By exploring the effects of permeability, shear moduli, nonlinearity, and viscosity on the numerical response during the different experimental loading conditions, we discuss their individual physical meaning by closely considering the underlying poro-viscoelastic modeling framework.</p>
</sec>
<sec sec-type="materials|methods" id="s2">
<title>2 Materials and Methods</title>
<sec id="s2-1">
<title>2.1 Human Brain Experiments</title>
<p>As a reference and to confirm the validity of seemingly contradictory results in the literature, we performed indentation and large-strain compression and tension experiments on exactly the same sample extracted from human gray and white matter tissue, respectively, as illustrated in <xref ref-type="fig" rid="F1">Figure&#x20;1</xref>. Human brain tissue was extracted from a body donor (female, age 77) who had given her written consent to donate her body to research. The study was additionally approved by the Ethics Committee of Friedrich-Alexander-University Erlangen-N&#xfc;rnberg, Germany, with the approval number 405_18&#x20;B.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Experimental evidence for the effect of the testing setup on the recorded regional mechanical response of human brain tissue. During indentation measurements <bold>(A)</bold>, white matter <bold>(D)</bold> shows higher forces <bold>(G)</bold> and a higher effective modulus <bold>(H)</bold> than gray matter <bold>(C)</bold>. During rheometer measurements <bold>(B)</bold> under large-strain cyclic compression and tension <bold>(I)</bold> as well as compression relaxation <bold>(J)</bold>, white matter <bold>(F)</bold> yields lower stresses than gray matter <bold>(E)</bold>.</p>
</caption>
<graphic xlink:href="fmech-07-708350-g001.tif"/>
</fig>
<p>For indentation experiments, we used the ZHN-Nanoindenter by ZwickRoell GmbH and Co. KG (Ulm, Germany), as shown in <xref ref-type="fig" rid="F1">Figure&#x20;1A</xref>, and closely followed the indentation procedure established in <xref ref-type="bibr" rid="B5">Budday et&#x20;al. (2015a)</xref>. We prepared tissue slices in a 120&#xa0;mm-diameter Petri dish and stabilized the samples using a 10&#xa0;mm-diameter stainless steel washer (see <xref ref-type="fig" rid="F1">Figures 1C,D</xref>). To ensure a homogeneous specimen response, we used a circular flat punch indenter with a diameter of 1.8&#xa0;mm and a ceramic shaft extension. We conducted all indentation tests at room temperature under displacement control using a trapezoidal loading-holding-unloading profile with a maximum indentation depth of 50&#xa0;<italic>&#x3bc;</italic>m, as illustrated in <xref ref-type="fig" rid="F2">Figure&#x20;2</xref>, bottom right, and recorded the corresponding force (see <xref ref-type="fig" rid="F1">Figure&#x20;1G</xref>).</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Numerical setup for the three experimental studies described in <xref ref-type="fig" rid="F1">Figure&#x20;1</xref> simulated with the poro-viscoelastic model. Finite element discretization of sample geometries, predicted deformed states using the base material parameters, and loading curves applied for&#x20;each.</p>
</caption>
<graphic xlink:href="fmech-07-708350-g002.tif"/>
</fig>
<p>For compression and tension experiments, we extracted cylindrical samples with a radius of <italic>r</italic>&#x20;&#x3d; 4&#xa0;mm (see <xref ref-type="fig" rid="F1">Figures 1E,F</xref>) and used a Discovery HR-3 rheometer from TA instruments (New Castle, Delaware, United&#x20;States), as shown in <xref ref-type="fig" rid="F1">Figure&#x20;1B</xref>. We fixed the specimens to the upper and lower specimen holder using sandpaper and superglue. After a waiting period of 30&#x2013;60&#xa0;s to let the glue dry, we immersed the specimen in PBS to keep it hydrated during the experiment. We conducted all rheometer tests at 37&#xb0;C. We note that previous studies have indicated that the mechanical response of brain tissue is not significantly affected by temperature in the range between 22&#xb0;C and 37&#xb0;C (<xref ref-type="bibr" rid="B48">Rashid et&#x20;al., 2012</xref>). We first applied three cycles of compression and tension with a loading velocity of 40&#xa0;<italic>&#x3bc;</italic>m/s, and minimum and maximum overall vertical stretches of <italic>&#x3bb;</italic> &#x3d; [<italic>h</italic>&#x20;&#x2b; &#x394;<italic>z</italic>]/<italic>h</italic>&#x20;&#x3d; 0.85 and <italic>&#x3bb;</italic> &#x3d; 1.15, where <italic>h</italic> denotes the initial specimen height and &#x394;<italic>z</italic> the displacement in the direction of loading (see <xref ref-type="fig" rid="F1">Figure&#x20;1I</xref>). Subsequently, we performed a compression relaxation test at <italic>&#x3bb;</italic> &#x3d; 0.85 with a loading velocity of 100&#xa0;<italic>&#x3bc;</italic>m/s and a holding period of 300&#xa0;s (see <xref ref-type="fig" rid="F1">Figure&#x20;1J</xref>). We recorded the corresponding force <italic>f</italic>
<sub>
<italic>z</italic>
</sub> and determined the nominal stress as <italic>P</italic>
<sub>exp</sub>&#x20;&#x3d; <italic>f</italic>
<sub>
<italic>z</italic>
</sub>/<italic>A</italic>, where <italic>A</italic>&#x20;&#x3d; <italic>&#x3c0;r</italic>
<sup>2</sup> is the undeformed cross-sectional area of the specimen. For more details on the testing procedure, we refer to <xref ref-type="bibr" rid="B34">Linka et&#x20;al. (2021)</xref>.</p>
</sec>
<sec id="s2-2">
<title>2.2 Nonlinear Poro-Viscoelastic Model</title>
<p>We model brain tissue as a poro-viscoelastic material where the viscoelastic solid represents the network of cells embedded within the extracellular matrix (ECM) and the free-flowing pore fluid is the interstitial fluid bathing the ECM. We use the numerical framework based on the Theory of Porous Media presented in our previous work (<xref ref-type="bibr" rid="B16">Comellas et&#x20;al., 2020</xref>). In this section we summarize the main characteristics of the formulation, which assumes a fully-saturated compressible biphasic material, and that the solid and fluid constituents are separately incompressible. A detailed description of the derivation of all equations presented here can be found in <xref ref-type="bibr" rid="B16">Comellas et&#x20;al. (2020)</xref> and its supplementary material.</p>
<sec id="s2-2-1">
<title>2.2.1 Continuum Kinematics</title>
<p>Following the Theory of Porous Media, the same spatial position <bold>
<italic>x</italic>
</bold> in the current configuration at a given time <italic>t</italic> is occupied simultaneously by the solid and fluid components. However, the material particles of each component originate from different reference positions at time <italic>t</italic>
<sub>0</sub>. Then, the constituent deformation map is <bold>
<italic>x</italic>
</bold> &#x3d; <bold>
<italic>&#x3c7;</italic>
</bold>
<sub>
<italic>S</italic>
</sub>(<bold>
<italic>X</italic>
</bold>
<sub>
<italic>S</italic>
</sub>, <italic>t</italic>) &#x3d; <bold>
<italic>&#x3c7;</italic>
</bold>
<sub>
<italic>F</italic>
</sub>(<bold>
<italic>X</italic>
</bold>
<sub>
<italic>F</italic>
</sub>, <italic>t</italic>), where <bold>
<italic>X</italic>
</bold>
<sub>
<italic>S</italic>
</sub> and <bold>
<italic>X</italic>
</bold>
<sub>
<italic>F</italic>
</sub> indicate the reference position of the solid and fluid components, respectively. The displacement of the solid component is, thus,<disp-formula id="e1">
<mml:math id="m1">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">u</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:mi mathvariant="bold-italic">x</mml:mi>
<mml:mo>&#x2212;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">X</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>,</mml:mo>
</mml:math>
<label>(1)</label>
</disp-formula>and<disp-formula id="e2">
<mml:math id="m2">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">F</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:mi>&#x2202;</mml:mi>
<mml:mi mathvariant="bold-italic">x</mml:mi>
<mml:mo>/</mml:mo>
<mml:mi>&#x2202;</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">X</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
<label>(2)</label>
</disp-formula>is its material deformation gradient.</p>
</sec>
<sec id="s2-2-2">
<title>2.2.2 Governing Equations</title>
<p>The weak form of the governing equations in the reference configuration is<disp-formula id="e3">
<mml:math id="m3">
<mml:msub>
<mml:mrow>
<mml:mo>&#x222b;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2207;</mml:mo>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi>&#x3b4;</mml:mi>
<mml:mi mathvariant="bold-italic">u</mml:mi>
</mml:mrow>
</mml:mfenced>
<mml:mspace width="-0.17em"/>
<mml:mo>:</mml:mo>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
<mml:mspace width="0.17em"/>
<mml:mi mathvariant="normal">d</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>V</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>0</mml:mn>
<mml:mspace width="1em"/>
<mml:mo>&#x2200;</mml:mo>
<mml:mi>&#x3b4;</mml:mi>
<mml:mi mathvariant="bold-italic">u</mml:mi>
<mml:mo>,</mml:mo>
<mml:mspace width="1em"/>
<mml:mi mathvariant="normal">a</mml:mi>
<mml:mi mathvariant="normal">n</mml:mi>
<mml:mi mathvariant="normal">d</mml:mi>
</mml:math>
<label>(3)</label>
</disp-formula>
<disp-formula id="e4">
<mml:math id="m4">
<mml:msub>
<mml:mrow>
<mml:mo>&#x222b;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msub>
<mml:mi>&#x3b4;</mml:mi>
<mml:mi>p</mml:mi>
<mml:mspace width="0.17em"/>
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mo>&#x307;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mspace width="0.17em"/>
<mml:mi mathvariant="normal">d</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>V</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mo>&#x222b;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2207;</mml:mo>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:mi>&#x3b4;</mml:mi>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:mfenced>
<mml:mo>&#x22c5;</mml:mo>
<mml:mi mathvariant="bold-italic">w</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mspace width="0.17em"/>
<mml:mi mathvariant="normal">d</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>V</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>0</mml:mn>
<mml:mspace width="1em"/>
<mml:mo>&#x2200;</mml:mo>
<mml:mi>&#x3b4;</mml:mi>
<mml:mi>p</mml:mi>
<mml:mo>.</mml:mo>
</mml:math>
<label>(4)</label>
</disp-formula>
</p>
<p>The linear momentum balance <xref ref-type="disp-formula" rid="e3">Eq. 3</xref> introduces the viscoelastic solid displacement test function <italic>&#x3b4;</italic>
<bold>
<italic>u</italic>
</bold> while the mass balance <xref ref-type="disp-formula" rid="e4">Eq. 4</xref> introduces the fluid pore pressure test function <italic>&#x3b4;p</italic>. Both equations are defined in the reference configuration <inline-formula id="inf1">
<mml:math id="m5">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula> of the biphasic material, where d<italic>V</italic>
<sub>0<italic>S</italic>
</sub> refers to the volume element of the material in the reference configuration of the solid. The Kirchhoff stress tensor <bold>
<italic>&#x3c4;</italic>
</bold> is given by the constitutive equation of the solid component while the constitutive equation of the fluid provides the volume-weighted seepage velocity <bold>
<italic>w</italic>
</bold>. The Jacobian <italic>J</italic>
<sub>
<italic>S</italic>
</sub> is the determinant of the material deformation gradient of the solid component <italic>J</italic>
<sub>
<italic>S</italic>
</sub> &#x3d; det(<bold>
<italic>F</italic>
</bold>
<sub>
<italic>S</italic>
</sub>) &#x3e; 0, and <inline-formula id="inf2">
<mml:math id="m6">
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mo>&#x307;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula> indicates its material time derivative. We neglect volumetric forces due to the effect of gravity and do not prescribe any external traction vector in <xref ref-type="disp-formula" rid="e3">Eq. 3</xref>. Forced fluid flow across the boundaries in <xref ref-type="disp-formula" rid="e4">Eq. 4</xref> is not prescribed either. Note that the time dependencies of the mass balance equation result in a nonstationary nature of the governing equations, even though they are formulated in a quasi-static framework.</p>
</sec>
<sec id="s2-2-3">
<title>2.2.3 Constitutive Equations</title>
<p>The deformation gradient of the solid component is split multiplicatively into elastic and viscous parts, <inline-formula id="inf3">
<mml:math id="m7">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">F</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">F</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x22c5;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">F</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>v</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, such that the &#x201c;extra&#x201d; part of the stress tensor is the sum of the equilibrium (eq) part, the non-equilibrium (neq) part, and a volumetric (vol) contribution,<disp-formula id="e5">
<mml:math id="m8">
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>E</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2212;</mml:mo>
<mml:mi>p</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mn mathvariant="bold-italic">1</mml:mn>
<mml:mo>&#x3d;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi mathvariant="normal">E</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>eq</mml:mtext>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2b;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi mathvariant="normal">E</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>neq</mml:mtext>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2b;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi mathvariant="normal">E</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>vol</mml:mtext>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2212;</mml:mo>
<mml:mi>p</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mn mathvariant="bold-italic">1</mml:mn>
<mml:mo>.</mml:mo>
</mml:math>
<label>(5)</label>
</disp-formula>
</p>
<p>Based on previous studies (<xref ref-type="bibr" rid="B7">Budday et&#x20;al., 2017a</xref>, <xref ref-type="bibr" rid="B6">Budday et&#x20;al., 2020</xref>), we select a one-term Ogden material model for both the equilibrium and non-equilibrium parts. Then,<disp-formula id="e6">
<mml:math id="m9">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>E</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>eq</mml:mtext>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:munderover accentunder="false" accent="false">
<mml:mrow>
<mml:mo>&#x2211;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>3</mml:mn>
</mml:mrow>
</mml:munderover>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b2;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mspace width="0.28em"/>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2297;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mspace width="1em"/>
<mml:mi mathvariant="normal">w</mml:mi>
<mml:mi mathvariant="normal">i</mml:mi>
<mml:mi mathvariant="normal">t</mml:mi>
<mml:mi mathvariant="normal">h</mml:mi>
<mml:mspace width="-0.17em"/>
<mml:mspace width="1em"/>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b2;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mfenced open="[" close="]">
<mml:mrow>
<mml:msubsup>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2212;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>3</mml:mn>
</mml:mrow>
</mml:mfrac>
<mml:mfenced open="[" close="]">
<mml:mrow>
<mml:msubsup>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2b;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mn>2</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2b;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mn>3</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
</mml:mfenced>
<mml:mo>,</mml:mo>
</mml:math>
<label>(6)</label>
</disp-formula>where <italic>&#x3b1;</italic>
<sub>
<italic>&#x221e;</italic>
</sub> and <italic>&#x3bc;</italic>
<sub>
<italic>&#x221e;</italic>
</sub> are the equilibrium Ogden shear and nonlinearity parameters, <inline-formula id="inf4">
<mml:math id="m10">
<mml:msub>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>a</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula> for <inline-formula id="inf5">
<mml:math id="m11">
<mml:mi>a</mml:mi>
<mml:mo>&#x2208;</mml:mo>
<mml:mfenced open="{" close="}">
<mml:mrow>
<mml:mn>1,2,3</mml:mn>
</mml:mrow>
</mml:mfenced>
</mml:math>
</inline-formula> are the isochoric principal stretches, and <bold>
<italic>n</italic>
</bold>
<sub>
<italic>S</italic>,<italic>A</italic>
</sub> are the eigenvectors of the left Cauchy-Green tensor <inline-formula id="inf6">
<mml:math id="m12">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">b</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">F</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x22c5;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">F</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>T</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, such that <inline-formula id="inf7">
<mml:math id="m13">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">b</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mo movablelimits="false" form="prefix">&#x2211;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>3</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:mspace width="0.28em"/>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2297;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula>. Note that the Ogden shear parameter <italic>&#x3bc;</italic>
<sub>
<italic>&#x221e;</italic>
</sub> is related to the classical shear modulus, known from the linear theory, through <inline-formula id="inf8">
<mml:math id="m14">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>0</mml:mtext>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:mfrac>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
</mml:msub>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula>.</p>
<p>The non-equilibrium counterpart is<disp-formula id="e7">
<mml:math id="m15">
<mml:mtable class="align" columnalign="left">
<mml:mtr>
<mml:mtd columnalign="right">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>E</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>neq</mml:mtext>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:munderover accentunder="false" accent="false">
<mml:mrow>
<mml:mo>&#x2211;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>3</mml:mn>
</mml:mrow>
</mml:munderover>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b2;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mspace width="0.28em"/>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2297;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mspace width="1em"/>
<mml:mi mathvariant="normal">w</mml:mi>
<mml:mi mathvariant="normal">i</mml:mi>
<mml:mi mathvariant="normal">t</mml:mi>
<mml:mi mathvariant="normal">h</mml:mi>
<mml:mspace width="-0.17em"/>
<mml:mspace width="1em"/>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b2;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mtd>
<mml:mtd columnalign="left">
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mfenced open="[" close="">
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msubsup>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msup>
</mml:mrow>
</mml:mfenced>
</mml:mtd>
</mml:mtr>
<mml:mtr>
<mml:mtd columnalign="right"/>
<mml:mtd columnalign="left">
<mml:mspace width="1em"/>
<mml:mfenced open="" close="]">
<mml:mrow>
<mml:mo>&#x2212;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>3</mml:mn>
</mml:mrow>
</mml:mfrac>
<mml:mfenced open="[" close="]">
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msubsup>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msup>
<mml:mo>&#x2b;</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msubsup>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mn>2</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msup>
<mml:mo>&#x2b;</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msubsup>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mn>3</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msup>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
</mml:mfenced>
<mml:mo>,</mml:mo>
</mml:mtd>
</mml:mtr>
</mml:mtable>
</mml:math>
<label>(7)</label>
</disp-formula>where <italic>&#x3b1;</italic>
<sub>1</sub> and <italic>&#x3bc;</italic>
<sub>1</sub> are the non-equilibrium Ogden shear and nonlinearity constitutive parameters, which again are related to the corresponding classical shear modulus through <inline-formula id="inf9">
<mml:math id="m16">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mtext>0</mml:mtext>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:mfrac>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula>. The terms <inline-formula id="inf10">
<mml:math id="m17">
<mml:msubsup>
<mml:mrow>
<mml:mover accent="true">
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mo>&#x303;</mml:mo>
</mml:mover>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>a</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> for <inline-formula id="inf11">
<mml:math id="m18">
<mml:mi>a</mml:mi>
<mml:mo>&#x2208;</mml:mo>
<mml:mfenced open="{" close="}">
<mml:mrow>
<mml:mn>1,2,3</mml:mn>
</mml:mrow>
</mml:mfenced>
</mml:math>
</inline-formula> are the isochoric elastic principal stretches, and <inline-formula id="inf12">
<mml:math id="m19">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> are the eigenvectors of the elastic part of the left Cauchy-Green tensor <inline-formula id="inf13">
<mml:math id="m20">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">b</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">F</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x22c5;</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">F</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:mi>T</mml:mi>
</mml:mrow>
</mml:msup>
</mml:math>
</inline-formula>, such that <inline-formula id="inf14">
<mml:math id="m21">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">b</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mo movablelimits="false" form="prefix">&#x2211;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>A</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>3</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:msup>
<mml:mrow>
<mml:mfenced open="[" close="]">
<mml:mrow>
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msup>
<mml:mspace width="0.28em"/>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2297;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mo>,</mml:mo>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>.</p>
<p>An evolution equation is required to complete the definition of the viscous solid behavior. To this aim, we introduce<disp-formula id="e8">
<mml:math id="m22">
<mml:mo>&#x2212;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">L</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>v</mml:mi>
</mml:mrow>
</mml:msub>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">b</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x22c5;</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">b</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>e</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:mo>&#x2212;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msup>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x3b7;</mml:mi>
</mml:mrow>
</mml:mfrac>
<mml:msup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>neq</mml:mtext>
</mml:mrow>
</mml:msup>
<mml:mo>,</mml:mo>
</mml:math>
<label>(8)</label>
</disp-formula>which assumes isotropy and introduces the viscosity of the solid component, <italic>&#x3b7;</italic>, such that we <italic>a priori</italic> satisfy a non-negative viscous dissipation term, i.e.,<disp-formula id="e9">
<mml:math id="m23">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">D</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>v</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:mi>&#x3b7;</mml:mi>
</mml:mrow>
</mml:mfrac>
<mml:msup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>neq</mml:mtext>
</mml:mrow>
</mml:msup>
<mml:mo>:</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>neq</mml:mtext>
</mml:mrow>
</mml:msup>
<mml:mo>&#x2265;</mml:mo>
<mml:mn>0</mml:mn>
<mml:mspace width="1em"/>
<mml:mi mathvariant="normal">f</mml:mi>
<mml:mi mathvariant="normal">o</mml:mi>
<mml:mi mathvariant="normal">r</mml:mi>
<mml:mspace width="1em"/>
<mml:mi>&#x3b7;</mml:mi>
<mml:mo>&#x3e;</mml:mo>
<mml:mn>0</mml:mn>
<mml:mo>.</mml:mo>
</mml:math>
<label>(9)</label>
</disp-formula>
</p>
<p>The viscous dissipation density rate <inline-formula id="inf15">
<mml:math id="m24">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">D</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>v</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula> derives from the Clausius&#x2013;Duhem inequality and represents the dissipation due to internal processes occurring within the viscous solid component.</p>
<p>Finally, the definition of the solid stress tensor 5) is completed with the volumetric contribution,<disp-formula id="e10">
<mml:math id="m25">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>E</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>vol</mml:mtext>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mi>&#x3bb;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mo>&#x2a;</mml:mo>
</mml:mrow>
</mml:msup>
<mml:msup>
<mml:mrow>
<mml:mfenced open="[" close="]">
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>&#x2212;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:msup>
<mml:mfenced open="[" close="]">
<mml:mrow>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>&#x2212;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfrac>
<mml:mo>&#x2212;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:mfenced>
<mml:mn mathvariant="bold">1</mml:mn>
<mml:mo>,</mml:mo>
</mml:math>
<label>(10)</label>
</disp-formula>where <italic>&#x3bb;</italic>&#x2a; is the first Lam&#xe9; parameter of the solid component and <inline-formula id="inf16">
<mml:math id="m26">
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> is the volume fraction of the solid component with respect to the solid reference configuration at the initial time. The term <inline-formula id="inf17">
<mml:math id="m27">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>E</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>vol</mml:mtext>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> accounts for the compressibility effects of the deforming biphasic material. It ensures the correct modeling of the compaction point, which occurs when all pores are closed such that no fluid remains in the material. Further volume deformations are not possible at this point due to the incompressibility constraint of the solid component (<xref ref-type="bibr" rid="B18">Ehlers and Eipper, 1999</xref>).</p>
<p>The constitutive behavior of the fluid component follows a Darcy-like law,<disp-formula id="e11">
<mml:math id="m28">
<mml:mi mathvariant="bold-italic">w</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mo>&#x2212;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:msup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>F</mml:mi>
<mml:mi>R</mml:mi>
</mml:mrow>
</mml:msup>
</mml:mrow>
</mml:mfrac>
<mml:mfenced open="[" close="]">
<mml:mrow>
<mml:mfrac>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>&#x2212;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:mfenced>
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">K</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x22c5;</mml:mo>
<mml:mo>&#x2207;</mml:mo>
<mml:mi>p</mml:mi>
<mml:mo>,</mml:mo>
</mml:math>
<label>(11)</label>
</disp-formula>where <italic>&#x3bc;</italic>
<sup>
<italic>FR</italic>
</sup> is the effective shear viscosity of the pore fluid and <inline-formula id="inf18">
<mml:math id="m29">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">K</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> is the initial intrinsic permeability tensor, which is assumed to be isotropic, i.e.,&#x20;<inline-formula id="inf19">
<mml:math id="m30">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">K</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>K</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mn mathvariant="bold-italic">1</mml:mn>
</mml:math>
</inline-formula>. Here, we have neglected the effect of gravity on the fluid behavior.</p>
<p>Like its counterpart <inline-formula id="inf20">
<mml:math id="m31">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">D</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>v</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula> in <xref ref-type="disp-formula" rid="e9">Eq. 9</xref>, the porous dissipation rate density derives from the Clausius-Duhem inequality and represents the dissipation due to the seepage process related to the material porosity. It is defined as<disp-formula id="e12">
<mml:math id="m32">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">D</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>p</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>F</mml:mi>
<mml:mi>R</mml:mi>
</mml:mrow>
</mml:msup>
<mml:mfenced open="[" close="]">
<mml:mrow>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
<mml:mo>&#x2212;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:mrow>
</mml:mfrac>
<mml:msup>
<mml:mrow>
<mml:mfenced open="(" close=")">
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>K</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
<mml:mn mathvariant="bold-italic">1</mml:mn>
</mml:mrow>
</mml:mfenced>
</mml:mrow>
<mml:mrow>
<mml:mo>&#x2212;</mml:mo>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msup>
<mml:mo>&#x22c5;</mml:mo>
<mml:mi mathvariant="bold-italic">w</mml:mi>
</mml:mrow>
</mml:mfenced>
<mml:mo>&#x22c5;</mml:mo>
<mml:mi mathvariant="bold-italic">w</mml:mi>
<mml:mo>&#x2265;</mml:mo>
<mml:mn>0</mml:mn>
<mml:mo>,</mml:mo>
</mml:math>
<label>(12)</label>
</disp-formula>which will always be non-negative, given that <italic>&#x3bc;</italic>
<sup>
<italic>FR</italic>
</sup> and <italic>K</italic>
<sub>0</sub> are necessarily positive and <inline-formula id="inf21">
<mml:math id="m33">
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x2208;</mml:mo>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:mn>0,1</mml:mn>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
</mml:math>
</inline-formula>.</p>
</sec>
<sec id="s2-2-4">
<title>2.2.4 Finite Element Implementation</title>
<p>We implemented the discretized governing equations using the open source finite element library <monospace>deal.ii</monospace> (<xref ref-type="bibr" rid="B2">Arndt et&#x20;al., 2020</xref>). A detailed derivation of the constitutive equations and dissipation terms as well as the discretization and numerical implementation details are available in <xref ref-type="bibr" rid="B16">Comellas et&#x20;al. (2020)</xref> and its associated supplementary material.</p>
</sec>
<sec id="s2-2-5">
<title>2.2.5 Numerical Setup</title>
<p>We investigate the behavior of the poro-viscoelastic formulation for three distinct loading scenarios corresponding to the experimental studies in <xref ref-type="sec" rid="s2-1">Section 2.1</xref>: 1) cyclic compression-tension (see <xref ref-type="fig" rid="F1">Figure&#x20;1I</xref>) and 2) compression relaxation (see <xref ref-type="fig" rid="F1">Figure&#x20;1J</xref>) of a cylindrical specimen (see <xref ref-type="fig" rid="F1">Figures 1E,F</xref>) using a rheometer (see <xref ref-type="fig" rid="F1">Figure&#x20;1B</xref>) as well as 3) indentation with a flat punch (see <xref ref-type="fig" rid="F1">Figures 1A,C,D,G,H</xref>). <xref ref-type="fig" rid="F2">Figure&#x20;2</xref> summarizes the numerical setup for the three test cases. A quarter of the cylindrical specimen is spatially discretized with 384 full integration Q2P1 elements for the cyclic loading and compression relaxation studies. That is, we approximate the solid displacement with quadratic shape functions and the pore pressure with linear ones. A quadrature of order 3 is considered. The degrees of freedom at the bottom of the geometry are fixed in space, while the vertical displacement shown in the right-most column is prescribed to the top surface. Symmetry boundary conditions are applied to the flat lateral surfaces. Solely the cylinder hull is drained, i.e. fluid can only leave the solid through the curved lateral surface. The deformed geometry depicts the local vertical stretch distribution on the fully compressed and extended states of the specimen for the cyclic loading, and the fully compressed state for the compression relaxation test. These states correspond to a 15% overall vertical strain. The spatial discretization to simulate the indentation experiments is composed of 2048 full integration Q2P1 elements. Again, in order to save computational effort, the computations are carried out only on one quarter of the real geometry. The finite element mesh is refined towards the center of the sample to approximate the flat punch indentation as accurately as possible, while maintaining a feasible computational cost. The bottom of the geometry is fixed in space and a vertical load shown in the bottom right of <xref ref-type="fig" rid="F2">Figure&#x20;2</xref> is applied to the degrees of freedom within the radius of the flat punch. Symmetry boundary conditions are applied to the inner lateral surfaces. All surfaces are undrained, except the unloaded part of the top surface, which is drained.</p>
<p>The material parameters used are given in <xref ref-type="table" rid="T1">Table&#x20;1</xref>. The initial solid volume fraction is set to 0.75. The first Lam&#xe9; parameter <italic>&#x3bb;</italic>&#x2a; is fixed to a value large enough that the quasi-incompressibility of the solid component is correctly enforced. The effective shear fluid viscosity of the free-flowing fluid in the brain tissue is assumed to be that of water at room temperature. Based on our previous findings (<xref ref-type="bibr" rid="B11">Budday and Steinmann, 2018</xref>; <xref ref-type="bibr" rid="B6">Budday et&#x20;al., 2020</xref>), the same nonlinearity Ogden parameter is used for the equilibrium and non-equilibrium parts <italic>&#x3b1;</italic> &#x3d; <italic>&#x3b1;</italic>
<sub>
<italic>&#x221e;</italic>
</sub> &#x3d; <italic>&#x3b1;</italic>
<sub>1</sub>. Throughout our simulations, we vary the equilibrium shear modulus <inline-formula id="inf22">
<mml:math id="m34">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, the non-equilibrium shear modulus <inline-formula id="inf23">
<mml:math id="m35">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, the nonlinearity Ogden parameter <italic>&#x3b1;</italic>, the solid viscosity <italic>&#x3b7;</italic> and the initial intrinsic permeability <italic>K</italic>
<sub>0</sub>. The ranges considered are given in <xref ref-type="table" rid="T1">Table&#x20;1</xref>.</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Poro-viscoelastic material parameters used in the simulations described in <xref ref-type="fig" rid="F2">Figure&#x20;2</xref>.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Parameter</th>
<th align="center">Value</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td colspan="2" align="left">Solid component</td>
</tr>
<tr>
<td align="left">&#xa0;<inline-formula id="inf24">
<mml:math id="m36">
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>
</td>
<td align="center">0.75</td>
</tr>
<tr>
<td align="left">&#xa0;<italic>&#x3bb;</italic>&#x2a;</td>
<td align="center">1&#xa0;MPa</td>
</tr>
<tr>
<td align="left">&#xa0;<inline-formula id="inf25">
<mml:math id="m37">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>
</td>
<td align="center">{0.12, 0.32, 0.84} kPa</td>
</tr>
<tr>
<td align="left">&#xa0;<inline-formula id="inf26">
<mml:math id="m38">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>
</td>
<td align="center">{1.2, 3.2, 8.4} kPa</td>
</tr>
<tr>
<td align="left">&#xa0;<italic>&#x3b1;</italic>
</td>
<td align="center">{&#x2212;5, &#x2212;8, &#x2212;13}</td>
</tr>
<tr>
<td align="left">&#xa0;<italic>&#x3b7;</italic>
</td>
<td align="center">{14, 28, 56} kPa&#x22c5;s</td>
</tr>
<tr>
<td colspan="2" align="left">Fluid component</td>
</tr>
<tr>
<td align="left">&#xa0;<italic>&#x3bc;</italic>
<sup>
<italic>FR</italic>
</sup>
</td>
<td align="center">0.89&#xa0;Pa&#x22c5;s</td>
</tr>
<tr>
<td align="left">&#xa0;<italic>K</italic>
<sub>0</sub>
</td>
<td align="center">{10<sup>&#x2013;8</sup>, 10<sup>&#x2013;10</sup>, 10<sup>&#x2013;12</sup>} mm<sup>2</sup>
</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>The numerical implementations of the three new experimental setups in the original code available from the <monospace>deal.ii</monospace> code gallery website and an exemplary input file for each type are provided in Supplementary Material.</p>
</sec>
</sec>
<sec id="s2-3">
<title>2.3 Data Analysis</title>
<p>We derive a series of useful quantities based on the experiments and our finite element results with the aim of analyzing the effect of different material parameters on computational measures with a direct experimental counterpart or numerical quantities that have a recognizable physical meaning.</p>
<p>The total reaction force on the loaded surfaces is computed at each integration point of the element faces of the loaded boundary <inline-formula id="inf27">
<mml:math id="m39">
<mml:mi>&#x2202;</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mo>,</mml:mo>
<mml:mi>l</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula>, given in the reference configuration, from<disp-formula id="e13">
<mml:math id="m40">
<mml:mi mathvariant="bold-italic">r</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mo>&#x222b;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x2202;</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mo>,</mml:mo>
<mml:mi>l</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msub>
<mml:mi mathvariant="bold-italic">&#x3c3;</mml:mi>
<mml:mo>&#x22c5;</mml:mo>
<mml:mi mathvariant="bold-italic">N</mml:mi>
<mml:mspace width="0.28em"/>
<mml:mi mathvariant="normal">d</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>.</mml:mo>
</mml:math>
<label>(13)</label>
</disp-formula>
</p>
<p>Here, <bold>
<italic>&#x3c3;</italic>
</bold> &#x3d; <bold>
<italic>&#x3c4;</italic>
</bold>/<italic>J</italic>
<sub>
<italic>S</italic>
</sub> is the total Cauchy stress and <bold>
<italic>N</italic>
</bold> is the outward unit vector of the loaded surface with area element d<italic>A</italic>
<sub>0<italic>S</italic>
</sub>, which is defined in the reference configuration of the solid component. Based on the definition of the Kirchhoff stress (5), the reaction force can also be split into a solid and a fluid contribution,<disp-formula id="e14">
<mml:math id="m41">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">r</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mo>&#x222b;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x2202;</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mo>,</mml:mo>
<mml:mi>l</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msub>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c3;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>E</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x22c5;</mml:mo>
<mml:mi mathvariant="bold-italic">N</mml:mi>
<mml:mspace width="0.28em"/>
<mml:mi mathvariant="normal">d</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mspace width="2em"/>
<mml:mi mathvariant="normal">a</mml:mi>
<mml:mi mathvariant="normal">n</mml:mi>
<mml:mi mathvariant="normal">d</mml:mi>
<mml:mspace width="2em"/>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="bold-italic">r</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>F</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mo>&#x222b;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x2202;</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mo>,</mml:mo>
<mml:mi>l</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2212;</mml:mo>
<mml:mi>p</mml:mi>
<mml:mspace width="0.17em"/>
<mml:mi mathvariant="bold-italic">N</mml:mi>
<mml:mspace width="0.28em"/>
<mml:mi mathvariant="normal">d</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>.</mml:mo>
</mml:math>
<label>(14)</label>
</disp-formula>
</p>
<p>For the cyclic loading and compression relaxation tests, we calculate the total, solid, and fluid contributions to the nominal stresses as the vertical component of the corresponding reaction force divided by the original cross-section of the sample. The total reaction force and total nominal stress are measures that are comparable to those typically obtained in experimental setups, as shown in <xref ref-type="fig" rid="F1">Figure&#x20;1</xref>. Our modeling approach allows us to break them into solid and fluid contributions, and, in this way, explore how they respond to different loading scenarios and material parameters.</p>
<p>We compute numerically the values of the viscous and porous total dissipation rates in the whole sample at each time step from the corresponding dissipation density rates defined in <xref ref-type="disp-formula" rid="e9">Eq. 9</xref> and <xref ref-type="disp-formula" rid="e12">Eq. 12</xref>, respectively. In particular,<disp-formula id="e15">
<mml:math id="m42">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="script">D</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>total</mml:mtext>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mo>&#x222b;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msub>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">D</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mspace width="0.28em"/>
<mml:mi mathvariant="normal">d</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>V</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>,</mml:mo>
</mml:math>
<label>(15)</label>
</disp-formula>where <italic>i</italic>&#x20;&#x3d; {<italic>p</italic>, <italic>v</italic>} for the porous and viscous contributions, respectively. Here, <inline-formula id="inf28">
<mml:math id="m43">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula> refers to the domain of the biphasic material in the reference configuration and d<italic>V</italic>
<sub>0<italic>S</italic>
</sub> is the volume element of the material in the reference configuration of the solid component. To obtain the accumulated dissipation over time, we determine the product <inline-formula id="inf29">
<mml:math id="m44">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="script">D</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>total</mml:mtext>
</mml:mrow>
</mml:msubsup>
<mml:mi mathvariant="normal">&#x394;</mml:mi>
<mml:mi>t</mml:mi>
</mml:math>
</inline-formula> at each time step, and sum over time. These dissipation terms are a measure of the porous and viscous contributions to the overall deformation process simulated in our numerical examples.</p>
<p>The solid volume of the sample is numerically computed as<disp-formula id="e16">
<mml:math id="m45">
<mml:msub>
<mml:mrow>
<mml:mi>V</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mo>&#x222b;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msub>
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:msub>
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mspace width="0.28em"/>
<mml:mi mathvariant="normal">d</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>V</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>s</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>,</mml:mo>
</mml:math>
<label>(16)</label>
</disp-formula>where the term <inline-formula id="inf30">
<mml:math id="m46">
<mml:msubsup>
<mml:mrow>
<mml:mi>n</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
<mml:msub>
<mml:mrow>
<mml:mi>J</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula> is known as the (current) solid volume fraction <italic>n</italic>
<sub>
<italic>S</italic>
</sub> at a given integration point. As in the previous equation, both <inline-formula id="inf31">
<mml:math id="m47">
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula> and d<italic>V</italic>
<sub>0<italic>S</italic>
</sub> correspond to the reference configuration. Ideally, the total solid volume should be constant due to the incompressibility assumption, but we compute it as a means of measuring how well the incompressibility has been enforced in our simulations.</p>
<p>Similarly to the reaction forces, the fluid flow across the drained boundaries <inline-formula id="inf32">
<mml:math id="m48">
<mml:mi>&#x2202;</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mo>,</mml:mo>
<mml:mi>d</mml:mi>
</mml:mrow>
</mml:msub>
</mml:math>
</inline-formula>, given in the reference configuration, is computed as<disp-formula id="e17">
<mml:math id="m49">
<mml:mi>Q</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mo>&#x222b;</mml:mo>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x2202;</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi mathvariant="script">B</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mo>,</mml:mo>
<mml:mi>d</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:msub>
<mml:mi mathvariant="bold-italic">w</mml:mi>
<mml:mo>&#x22c5;</mml:mo>
<mml:mi mathvariant="bold-italic">N</mml:mi>
<mml:mspace width="0.28em"/>
<mml:mi mathvariant="normal">d</mml:mi>
<mml:msub>
<mml:mrow>
<mml:mi>A</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>.</mml:mo>
</mml:math>
<label>(17)</label>
</disp-formula>
</p>
<p>Here, <bold>
<italic>w</italic>
</bold> is the volume-weighted seepage velocity as defined in <xref ref-type="disp-formula" rid="e11">Eq. 11</xref> and <bold>
<italic>N</italic>
</bold> is the outward unit vector of the drained surface with area element d<italic>A</italic>
<sub>0<italic>S</italic>
</sub>, which is defined in the reference configuration of the solid component. The fluid flow predicted in our simulations provides additional insights into the porous behavior of the material and can potentially be related to experimental measures, e.g., fluid collected after confined compression of a sample.</p>
<p>Finally, following the procedure described in <xref ref-type="bibr" rid="B5">Budday et&#x20;al. (2015a)</xref>, we compute the effective modulus for the indentation simulations as<disp-formula id="e18">
<mml:math id="m50">
<mml:msub>
<mml:mrow>
<mml:mi>E</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>eff</mml:mtext>
</mml:mrow>
</mml:msub>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>3</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>4</mml:mn>
</mml:mrow>
</mml:mfrac>
<mml:mfrac>
<mml:mrow>
<mml:mi>k</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
<mml:msub>
<mml:mrow>
<mml:mi>r</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>i</mml:mi>
</mml:mrow>
</mml:msub>
</mml:mrow>
</mml:mfrac>
</mml:math>
<label>(18)</label>
</disp-formula>from the contact stiffness <italic>k</italic> and the punch radius <italic>r</italic>
<sub>
<italic>i</italic>
</sub>. The contact stiffness <italic>k</italic> is defined as the average slope of the upper 50<italic>%</italic> of the reaction force curve during loading, as commonly used for the analysis of indentation experiments (<xref ref-type="bibr" rid="B44">Oliver and Pharr, 2004</xref>; <xref ref-type="bibr" rid="B26">Gupta et&#x20;al., 2007</xref>; <xref ref-type="bibr" rid="B5">Budday et&#x20;al., 2015a</xref>).</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>3 Results</title>
<p>To evaluate the influence of different material properties on the response of human brain tissue during different quasi-static biomechanical experiments, we perform parameter studies in the following and systematically vary the intrinsic permeability, equilibrium and non-equilibrium shear moduli, nonlinearity, and viscosity. We simulate the tissue behavior during cyclic compression&#x2013;tension experiments, stress relaxation in compression, and indentation measurements, and analyze the corresponding behavior. The parameter ranges are chosen to represent different brain regions, e.g., cortex and corona radiata, with the aim to explain the contradictory results between large-strain compression and indentation experiments illustrated in <xref ref-type="fig" rid="F1">Figure&#x20;1</xref> based on the complex poro-viscoelastic model introduced in <xref ref-type="sec" rid="s2-2">Section 2.2</xref> with the setup-dependent boundary conditions introduced in <xref ref-type="sec" rid="s2-2-5">Section&#x20;2.2.5</xref>.</p>
<sec id="s3-1">
<title>3.1 The Effect of the Intrinsic Permeability</title>
<p>
<xref ref-type="fig" rid="F3">Figure&#x20;3</xref> illustrates the effect of varying initial intrinsic permeabilities <italic>K</italic>
<sub>0</sub> on the response during cyclic compression&#x2013;tension experiments. The total nominal stress is plotted on the left, the solid contribution in the middle and the fluid contribution on the right. While the total stress is only marginally affected by the intrinsic permeability, the individual contributions of the solid and fluid component change significantly. The solid nominal stress decreases with decreasing permeabilities, while the fluid nominal stress increases: A lower permeability results in a higher fluid contribution to the total nominal stress. For intrinsic permeabilities of <italic>K</italic>
<sub>0</sub> &#x2265; 10<sup>&#x2013;6</sup>&#xa0;mm<sup>2</sup>, the contribution of the fluid is negligible, while it makes up about one sixth of the total nominal stress under compressive loading and about one fourth under tensile loading for smaller permeabilities.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>Cyclic compression&#x2013;tension test up to 15% strain. Total nominal stress <bold>(left)</bold>, solid nominal stress <bold>(middle)</bold> and fluid nominal stress <bold>(right)</bold> versus overall stretch for <inline-formula id="inf33">
<mml:math id="m51">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>0.32</mml:mn>
<mml:mspace width="0.17em"/>
<mml:mtext>kPa</mml:mtext>
</mml:math>
</inline-formula>, <inline-formula id="inf34">
<mml:math id="m52">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>8.4</mml:mn>
<mml:mspace width="0.17em"/>
<mml:mtext>kPa</mml:mtext>
</mml:math>
</inline-formula>, <italic>&#x3b1;</italic> &#x3d; &#x2212;8, <italic>&#x3b7;</italic> &#x3d; 14&#xa0;kPa &#x22c5;s and different initial intrinsic permeabilities <italic>K</italic>
<sub>0</sub> &#x3d; {10<sup>&#x2013;6</sup>, 10<sup>&#x2013;8</sup>, 10<sup>&#x2013;9</sup>, 10<sup>&#x2013;10</sup>, 10<sup>&#x2212;12</sup>} mm<sup>2</sup>.</p>
</caption>
<graphic xlink:href="fmech-07-708350-g003.tif"/>
</fig>
<p>Depending on the intrinsic permeability, the stress-stretch curves for the fluid nominal stress change notably. This can be directly related to the fluid&#x2019;s ability to move through the solid faster or slower, which may generate inertial-like effects due to a delayed response or resistance to change of the fluid flow. For high permeabilities, the fluid moves easily through the solid structure such that, after overcoming inertia effects when the loading rate or direction changes, the fluid stress decreases rapidly. In contrast, for low permeabilities, the fluid moves slower through the solid experiencing more resistance. For the case with the smallest permeability, the fluid stress increases throughout the entire loading time before a delayed response to the change of loading direction takes place, resulting in stress-stretch curves more similar to the viscous solid itself.</p>
<p>
<xref ref-type="fig" rid="F4">Figure&#x20;4</xref> shows the accumulated viscous dissipation over the set of three cycles on the left, the accumulated porous dissipation in the middle and the volume change of the solid component on the right. For the present choice of parameters, the viscous dissipation is distinctly larger than the porous dissipation. In addition, changing the intrinsic permeability barely influences the viscous dissipation. Interestingly, for the porous dissipation, we observe a maximum for an intrinsic permeability of <italic>K</italic>
<sub>0</sub> &#x3d; 10<sup>&#x2212;10</sup>&#xa0;mm<sup>2</sup>. This effect is associated with <xref ref-type="disp-formula" rid="e12">Eq. 12</xref>, which indicates that a decreasing initial intrinsic permeability leads to an increase in the porous dissipation but also a decrease in the volume-weighted seepage velocity <italic>w</italic>, which results in the observed maximum.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>Cyclic compression&#x2013;tension test up to 15% strain. Accumulated viscous dissipation <bold>(left)</bold>, accumulated porous dissipation <bold>(middle)</bold> and solid volume <bold>(right)</bold> over time for <inline-formula id="inf35">
<mml:math id="m53">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>0.32</mml:mn>
<mml:mspace width="0.17em"/>
<mml:mtext>kPa</mml:mtext>
</mml:math>
</inline-formula>, <inline-formula id="inf36">
<mml:math id="m54">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>8.4</mml:mn>
<mml:mspace width="0.17em"/>
<mml:mtext>kPa</mml:mtext>
</mml:math>
</inline-formula>, <italic>&#x3b1;</italic> &#x3d; &#x2212;8, <italic>&#x3b7;</italic> &#x3d; 14&#xa0;kPa &#x22c5;s and different initial intrinsic permeabilities <italic>K</italic>
<sub>0</sub> &#x3d; {10<sup>&#x2212;6</sup>, 10<sup>&#x2212;8</sup>, 10<sup>&#x2212;9</sup>, 10<sup>&#x2212;10</sup>, 10<sup>&#x2212;12</sup>} mm<sup>2</sup>.</p>
</caption>
<graphic xlink:href="fmech-07-708350-g004.tif"/>
</fig>
<p>The slight variations in the solid volume in <xref ref-type="fig" rid="F4">Figure&#x20;4</xref>, right, show that the intrinsic permeability affects how strictly the incompressibility is enforced. As the formulation has a volumetric stress defined in terms of the first Lam&#xe9; parameter <italic>&#x3bb;</italic>&#x2a; (see <xref ref-type="disp-formula" rid="e10">Eq. 10</xref>), we have selected a constant <italic>&#x3bb;</italic>&#x2a; instead of a constant Poisson&#x2019;s ratio <italic>&#x3bd;</italic> in our parameter study. Enforcing a constant <italic>&#x3bd;</italic> when exploring variations of the shear modulus and nonlinearity parameter in the Ogden model would result in different <italic>&#x3bb;</italic>&#x2a; values for each combination of parameters, given that <italic>&#x3bb;</italic>&#x2a; &#x3d; 2<italic>&#x3bc;</italic>
<sup>0</sup>
<italic>&#x3bd;</italic>/(1 &#x2212; 2<italic>&#x3bd;</italic>), where <italic>&#x3bc;</italic>
<sup>0</sup> is the classical shear modulus. By selecting a constant <italic>&#x3bb;</italic>&#x2a;, we ensure that the volumetric part of the stress is independent of these parameters and, hence, avoid unwanted interference in the sensitivity study. In addition, initial attempts to explore the effect of the Poisson&#x2019;s ratio on the predicted material response resulted in numerical instabilities around peak loading times for the compression relaxation tests, even with values above 0.49. In these simulations we converted the Poisson&#x2019;s ratio to <italic>&#x3bb;</italic>&#x2a; using the equilibrium shear modulus, i.e.,&#x20;with <inline-formula id="inf37">
<mml:math id="m55">
<mml:msup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>0</mml:mtext>
</mml:mrow>
</mml:msup>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:mfrac>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mi>&#x3b1;</mml:mi>
</mml:math>
</inline-formula>. Upon closer inspection we realized that the sum of the equilibrium and non-equilibrium shear moduli should be used instead, <inline-formula id="inf38">
<mml:math id="m56">
<mml:msup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>0</mml:mtext>
</mml:mrow>
</mml:msup>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>2</mml:mn>
</mml:mrow>
</mml:mfrac>
<mml:mrow>
<mml:mo stretchy="false">(</mml:mo>
<mml:mrow>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
</mml:msub>
<mml:mo>&#x2b;</mml:mo>
<mml:msub>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
</mml:msub>
</mml:mrow>
<mml:mo stretchy="false">)</mml:mo>
</mml:mrow>
<mml:mi>&#x3b1;</mml:mi>
</mml:math>
</inline-formula>, to avoid the instabilities. We realized conversion from <italic>&#x3bd;</italic> to <italic>&#x3bb;</italic>&#x2a; is not straightforward for the viscoelastic case, supporting our decision of selecting a constant <italic>&#x3bb;</italic>&#x2a; to remove any unsought effect of changes in the parameter used to enforce the quasi-incompressibility. Yet, even with a constant <italic>&#x3bb;</italic>&#x2a;, we note that a lower permeability results in a better quasi-incompressibility of the solid component. This could be attributed to the fact that a lower permeability results in more fluid &#x201c;trapped&#x201d; in the pores of the biphasic material, which then exerts a larger hydrostatic pressure on the solid component.</p>
<p>During stress relaxation and indentation experiments, trends in fluid flow over the boundary can directly be tied to the behavior over time of the fluid nominal stresses, as illustrated in <xref ref-type="fig" rid="F5">Figures 5</xref>, <xref ref-type="fig" rid="F6">6</xref>. For high permeabilities, we observe that the fluid stresses adopt positive values as soon as the loading rate is zero (holding period). This can be attributed to the fact that fluid immediately starts to flow back into the sample. For lower permeabilities, in contrast, fluid continues to flow out, but at smaller rates. Therefore, we suppose that there is a longer period of inertial-like effects. It is interesting to note that we may observe a negative fluid flow over the boundary, i.e.,&#x20;overall fluid is entering the sample, but locally have fluid flowing outwards. This can, for instance, be seen during indentation experiments in <xref ref-type="sec" rid="s11">Supplementary Figure S1</xref>. Another interesting effect we observe is that when the biphasic material deforms and occupies new volume in space, it can potentially incorporate new fluid. This occurs when the loading inertia forcing fluid outwards is negligible or does not offer enough resistance to the potential inward flow. In summary, as the sample is immersed in fluid during the experiments to avoid dehydration, small and slow displacements may result in fluid flow into the sample across drained boundaries.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>Compression relaxation test up to 15% strain. Left: Normalized fluid nominal stress <bold>(top left)</bold> and fluid flow over the boundary <bold>(bottom left)</bold> over time for <inline-formula id="inf39">
<mml:math id="m57">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>0.32</mml:mn>
<mml:mspace width="0.17em"/>
<mml:mtext>kPa</mml:mtext>
</mml:math>
</inline-formula>, <inline-formula id="inf40">
<mml:math id="m58">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>8.4</mml:mn>
<mml:mspace width="0.17em"/>
<mml:mtext>kPa</mml:mtext>
</mml:math>
</inline-formula>, <italic>&#x3b1;</italic> &#x3d; &#x2212;8, <italic>&#x3b7;</italic> &#x3d; 14&#xa0;kPa &#x22c5;s and different initial intrinsic permeabilities <italic>K</italic>
<sub>0</sub> &#x3d; {10<sup>&#x2212;8</sup>, 10<sup>&#x2212;10</sup>, 10<sup>&#x2212;12</sup>} mm<sup>2</sup>. Right: Corresponding finite element results of the seepage velocity at the end of loading (<italic>t</italic>&#x20;&#x3d; 6&#x20;s) and for the subsequent time step (<italic>t</italic>&#x20;&#x3d; 6.5&#x20;s). The depicted arrows on the selected vertical plane of the sample are sized proportional to the magnitude of the seepage velocity, given in mm/s, scaled by the factor indicated below each colorbar legend. Corresponding videos with the full simulation results are available in Supplementary Material.</p>
</caption>
<graphic xlink:href="fmech-07-708350-g005.tif"/>
</fig>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>Indentation test with an indentation depth of 50&#xa0;<italic>&#x3bc;</italic>m. Left: Reaction force due to the fluid <bold>(top left)</bold> and fluid flow over the boundary <bold>(bottom left)</bold> over time for <italic>&#x3bc;</italic>
<sub>
<italic>&#x221e;</italic>
</sub> &#x3d; 0.32&#x20;kPa, <italic>&#x3bc;</italic>
<sub>1</sub> &#x3d; 8.4&#x20;kPa, <italic>&#x3b1;</italic> &#x3d; &#x2212;8, <italic>&#x3b7;</italic> &#x3d; 14&#xa0;kPa &#x22c5;s and different initial intrinsic permeabilities <italic>K</italic>
<sub>0</sub> &#x3d; {10<sup>&#x2212;8</sup>, 10<sup>&#x2212;10</sup>, 10<sup>&#x2212;12</sup>} mm<sup>2</sup>. Right: Corresponding finite element results of the seepage velocity at the end of loading (<italic>t</italic>&#x20;&#x3d; 10&#x20;s) and for the subsequent time step (<italic>t</italic>&#x20;&#x3d; 11&#x20;s). Results are shown for the whole sample and for the indicated vertical cross-section. The depicted arrows are sized proportional to the magnitude of the seepage velocity, given in mm/s, scaled by the factor indicated below each colorbar legend. Corresponding videos with the full simulation results on the vertical cross-section are available in Supplementary Material.</p>
</caption>
<graphic xlink:href="fmech-07-708350-g006.tif"/>
</fig>
<p>In the sequel, we will evaluate the effects of the equilibrium and non-equilibrium shear moduli, nonlinearity, and viscosity on&#x20;the tissue response for different initial intrinsic permeabilities <italic>K</italic>
<sub>0</sub> &#x3d; {10<sup>&#x2212;8</sup>, 10<sup>&#x2212;10</sup>, 10<sup>&#x2212;12</sup>}&#x20;mm<sup>2</sup>.</p>
</sec>
<sec id="s3-2">
<title>3.2 The Effect of the Shear Modulus</title>
<p>
<xref ref-type="fig" rid="F7">Figure&#x20;7</xref>, first column, shows the effect of varying shear moduli <inline-formula id="inf41">
<mml:math id="m59">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> and intrinsic permeabilities <italic>K</italic>
<sub>0</sub> on the maximum overall nominal stress with individual solid and fluid contributions during cyclic compression (A1) and tension (A2), the corresponding accumulated viscous (A3) and porous (A4) dissipation, the maximum stress during stress relaxation (A5), and the effective modulus during indentation experiments (A6). Under compressive loading, the maximum overall nominal stress increases for increasing shear modulus and also increases slightly for increasing permeability (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> A1 and A5). The effective modulus from indentation also increases for increasing <inline-formula id="inf42">
<mml:math id="m60">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, but is only marginally affected by a change in the permeability (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> A6). Under tensile loading, the maximum nominal stress shows the opposite trend and decreases for increasing equilibrium shear modulus (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> A2). It reaches a maximum for <italic>K</italic>
<sub>0</sub> &#x3d; 10<sup>&#x2212;10</sup>&#xa0;mm<sup>2</sup>, which can be attributed to the significant increase in the fluid contribution between <italic>K</italic>
<sub>0</sub>&#x20;&#x3d;&#x20;10<sup>&#x2212;8</sup>&#xa0;mm<sup>2</sup> and <italic>K</italic>
<sub>0</sub> &#x3d; 10<sup>&#x2212;10</sup>&#xa0;mm<sup>2</sup>. In general, the fluid contribution is higher in tension than in compression.</p>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>Effect of <bold>(A)</bold> the equilibrium shear modulus <inline-formula id="inf43">
<mml:math id="m61">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, <bold>(B)</bold> the non-equilibrium shear modulus <inline-formula id="inf44">
<mml:math id="m62">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, <bold>(C)</bold> the nonlinearity Ogden parameter <italic>&#x3b1;</italic>, and <bold>(D)</bold> the solid viscosity <italic>&#x3b7;</italic> for different initial intrinsic permeabilities <italic>K</italic>
<sub>0</sub> &#x3d; {10<sup>&#x2212;8</sup>, 10<sup>&#x2212;10</sup>, 10<sup>&#x2212;12</sup>} mm<sup>2</sup> on the maximum stresses, and viscous and porous dissipations during cyclic compression&#x2013;tension (rows 1-4), maximum stresses and the total/solid/fluid contributions to stress relaxation after 300&#x20;s in percent for compression relaxation (row 5), and the effective modulus from indentation (row 6). For nominal stress plots, the fluid contribution to the total stress is indicated in a darker&#x20;shade.</p>
</caption>
<graphic xlink:href="fmech-07-708350-g007.tif"/>
</fig>
<p>The viscous dissipation remains almost constant for different shear moduli and permeabilities (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> A3). The porous dissipation, in contrast, shows a coupled dependency on the shear modulus and the intrinsic permeability (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> A4). It increases with increasing shear modulus and again shows its maximum for an intrinsic permeability of <italic>K</italic>
<sub>0</sub> &#x3d; 10<sup>&#x2212;10</sup>&#xa0;mm<sup>2</sup>. These results demonstrate that the stiffness of the solid has a strong influence on the fluid response. Varying the shear modulus also noticeably affects the stress-stretch curves for the fluid nominal stress, as illustrated in <xref ref-type="fig" rid="F8">Figure&#x20;8</xref>, first row. We note that, depending on the shear modulus, the maximum tensile stress is not necessarily reached for the maximum stretch.</p>
<fig id="F8" position="float">
<label>FIGURE 8</label>
<caption>
<p>Effect of the equilibrium shear modulus <inline-formula id="inf45">
<mml:math id="m63">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mtext>0</mml:mtext>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> (first row), the non-equilibrium shear modulus <inline-formula id="inf46">
<mml:math id="m64">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mtext>0</mml:mtext>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> (second row), the nonlinearity Ogden parameter <italic>&#x3b1;</italic> (third row), and the solid viscosity <italic>&#x3b7;</italic> (fourth row) on the stress-stretch response during cyclic compression&#x2013;tension for an initial intrinsic permeability <italic>K</italic>
<sub>0</sub> &#x3d; 10<sup>&#x2212;10</sup>&#xa0;mm<sup>2</sup>.</p>
</caption>
<graphic xlink:href="fmech-07-708350-g008.tif"/>
</fig>
<p>The stress relaxation experiments in <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> A5 reveal that the stress relaxed after 300&#x20;s of holding time decreases with increasing shear modulus. Independent of the shear modulus and permeability, the fluid stress relaxes faster than the solid stress. While for higher permeabilities, the fluid stress has fully relaxed after five minutes, it still contributes to the total stress for the lowest intrinsic permeability of <italic>K</italic>
<sub>0</sub> &#x3d; 10<sup>&#x2212;12</sup>&#xa0;mm<sup>2</sup> as only between 75&#x20;<italic>%</italic> and 95<italic>%</italic> of the fluid nominal stress have relaxed. Still, the overall stress relaxation remains almost constant, as the increasing fluid contribution takes over some part of the solid relaxation.</p>
<p>
<xref ref-type="fig" rid="F7">Figure&#x20;7</xref>, second column, shows the effect of the non-equilibrium shear modulus <inline-formula id="inf47">
<mml:math id="m65">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> on cyclic compression&#x2013;tension, compression stress relaxation, and indentation experiments. The maximum nominal compressive stress increases with increasing shear modulus (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> B1 and B5), but this effect is less pronounced than for the equilibrium shear modulus. In contrast to the influence of <inline-formula id="inf48">
<mml:math id="m66">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, the maximum nominal tensile stress also increases with increasing <inline-formula id="inf49">
<mml:math id="m67">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> B2). The opposite effect on the total tensile stresses is also well visible in the stress-stretch curves in <xref ref-type="fig" rid="F8">Figure&#x20;8</xref>. When comparing the first and second row, the trends are similar in compression, but differ in tension. Both viscous and porous dissipation strongly depend on the non-equilibrium shear modulus (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> B3 and B4): the dissipation increases with increasing <inline-formula id="inf50">
<mml:math id="m68">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>. Consequently, while the effect of a varying non-equilibrium shear modulus on the maximum stress during the stress relaxation experiments is similar to the effect of the equilibrium shear modulus (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> B5), the total stress relaxed after 5&#xa0;min holding time increases instead of decreasing. In addition, the effective modulus from indentation simulations shows significantly different trends (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> B6). Here, the effective modulus reaches a maximum for an intermediate non-equilibrium shear modulus but decreases again, when the shear modulus is further increased.</p>
</sec>
<sec id="s3-3">
<title>3.3 The Effect of the Nonlinearity</title>
<p>
<xref ref-type="fig" rid="F7">Figure&#x20;7</xref>, third column, shows the effect of the nonlinearity parameter <italic>&#x3b1;</italic> on cyclic compression&#x2013;tension, compression stress relaxation, and indentation experiments. We chose negative values for <italic>&#x3b1;</italic> to capture the stiffer response under compression than under tension, which is an important feature of brain tissue behavior, as shown in <xref ref-type="fig" rid="F1">Figure&#x20;1I</xref>. Under compressive loading, increasing <italic>&#x3b1;</italic> values result in an increase of the maximum nominal stress, both in cyclic loading and stress relaxation (<xref ref-type="fig" rid="F7">Figure&#x20;7</xref> C1 and C5). Under tensile loading, we observe the opposite trend (<xref ref-type="fig" rid="F7">Figure&#x20;7</xref> C2), similar to the effect of <inline-formula id="inf51">
<mml:math id="m69">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>. This can be attributed to similar stress-stretch curves during cyclic loading in <xref ref-type="fig" rid="F8">Figure&#x20;8</xref> for <italic>&#x3b1;</italic> (third row) and <inline-formula id="inf52">
<mml:math id="m70">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> (first row). We further observe increased fluid nominal stresses under both compressive and tensile loading, showing that the fluid response also depends on the nonlinearity of the viscous solid. The accumulated viscous dissipation increases with increasing nonlinearity (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> C3) and this effect is even more pronounced for the porous dissipation (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> C4). This clearly shows that the nonlinearity not only affects the viscous response but also the behavior of the fluid. A high nonlinearity of <italic>&#x3b1;</italic> &#x3d; &#x2212;13 not only produces larger stresses associated to the solid part (&#x201c;extra&#x201d; Cauchy stress <inline-formula id="inf53">
<mml:math id="m71">
<mml:msubsup>
<mml:mrow>
<mml:mi mathvariant="bold-italic">&#x3c4;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>E</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>S</mml:mi>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> in <xref ref-type="disp-formula" rid="e5">Eq. 5</xref>, see <xref ref-type="fig" rid="F9">Figure&#x20;9</xref>, bottom left), but also largely affects the pore fluid values and distributions (see <xref ref-type="fig" rid="F9">Figure&#x20;9</xref>, bottom right). Higher nonlinearities result in a longer porous relaxation (the pore pressure takes much longer to relax to zero). These individual components add up to the total Cauchy stress shown in <xref ref-type="fig" rid="F9">Figure&#x20;9</xref>, top left. We observe that higher nonlinearities yield higher stresses during loading and, additionally, stress relaxation progresses more slowly. The total stress relaxed after 5&#xa0;minutes decreases for increasing <italic>&#x3b1;</italic> (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> C5). Larger &#x201c;extra&#x201d; stresses can be associated with the larger solid volume fraction values (see <xref ref-type="fig" rid="F10">Figure&#x20;10</xref>, top left), which in turn are linked to the fluid flowing out of the sample (see seepage velocities in <xref ref-type="fig" rid="F10">Figure&#x20;10</xref>, top right). This is another example of how the behavior of the solid and fluid components is linked and, thus, the coupling of porous and viscous contributions. For larger <italic>&#x3b1;</italic> values the viscous (see <xref ref-type="fig" rid="F10">Figure&#x20;10</xref>, bottom left) and porous (see <xref ref-type="fig" rid="F10">Figure&#x20;10</xref>, bottom right) dissipation rates are slightly higher at the end of loading. However, the viscous dissipation reduces faster for <italic>&#x3b1;</italic>&#x20;&#x3d; &#x2212;13 than for lower nonlinearities, while we observe the opposite trend for the porous dissipation. We note that the finite element results in <xref ref-type="fig" rid="F9">Figures 9</xref>, <xref ref-type="fig" rid="F10">10</xref> also demonstrate that all values are inhomogeneously distributed in the vertical cross-section of the sample due to the loading conditions not being purely uniaxial.</p>
<fig id="F9" position="float">
<label>FIGURE 9</label>
<caption>
<p>Compression relaxation test up to 15% strain. Finite element results for <italic>K</italic>
<sub>0</sub> &#x3d; 10<sup>&#x2212;10</sup>&#xa0;mm<sup>2</sup>, <inline-formula id="inf54">
<mml:math id="m72">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>0.32</mml:mn>
<mml:mspace width="0.17em"/>
<mml:mtext>kPa</mml:mtext>
</mml:math>
</inline-formula>, <italic>&#x3bc;</italic>
<sub>1</sub> &#x3d; 8.4&#x20;kPa, <italic>&#x3b7;</italic> &#x3d; 14&#xa0;kPa &#x22c5;s and different nonlinear Ogden parameters <italic>&#x3b1;</italic> &#x3d; {&#x2212;5, &#x2212;8, &#x2212;13}. Results are shown for the selected vertical plane <bold>(top right)</bold> at the end of loading (<italic>t</italic>&#x20;&#x3d; 6&#x20;s), for the subsequent time step (<italic>t</italic>&#x20;&#x3d;&#x20;6.5&#x20;s) and at <italic>t</italic>&#x20;&#x3d; 30.5&#x20;s. Vertical component of the total Cauchy stress <bold>(top left)</bold>, vertical component of the &#x2018;extra&#x2019; Cauchy stress (bottom left), and fluid pore pressure (bottom right), all given in Pa. Additional results provided in <xref ref-type="fig" rid="F10">Figure&#x20;10</xref>. Corresponding videos with the full simulation results are available in Supplementary Material.</p>
</caption>
<graphic xlink:href="fmech-07-708350-g009.tif"/>
</fig>
<fig id="F10" position="float">
<label>FIGURE 10</label>
<caption>
<p>Additional finite element results corresponding to the simulation described in <xref ref-type="fig" rid="F9">Figure&#x20;9</xref>. Solid volume fraction <bold>(top left)</bold>, seepage velocity (top right), viscous dissipation rate <bold>(bottom left)</bold> and porous dissipation rate <bold>(bottom right)</bold>. Dissipation rates are given in nJ/s. The depicted arrows representing the seepage velocity are sized proportional to its magnitude, given in mm/s, scaled by the factor indicated to the left of each row. Corresponding videos with the full simulation results are available in Supplementary Material.</p>
</caption>
<graphic xlink:href="fmech-07-708350-g010.tif"/>
</fig>
<p>Since the nonlinearity parameter has an exponential character, its influence becomes more pronounced for larger deformations. Therefore, the indentation results (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> C6), which are associated with smaller strains than the compression and tension experiments, are only marginally affected by changes in <italic>&#x3b1;</italic>. Interestingly, the effective modulus is lowest for the intermediate <italic>&#x3b1;</italic>, and increases for higher or smaller values. This shows that the relation between <italic>&#x3b1;</italic> and the indentation modulus is not linear.</p>
</sec>
<sec id="s3-4">
<title>3.4 The Effect of the Viscosity</title>
<p>
<xref ref-type="fig" rid="F7">Figure&#x20;7</xref>, fourth column, shows the effect of the viscosity <italic>&#x3b7;</italic> on cyclic compression&#x2013;tension, compression stress relaxation, and indentation experiments. Increasing the viscosity leads to a significant increase in the maximum nominal stress during both compression and especially tension (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> D1, D2, and D5). Interestingly, increasing the viscosity leads to a less nonlinear and less compression&#x2013;tension asymmetric response (see <xref ref-type="fig" rid="F8">Figure&#x20;8</xref>, bottom left). In addition, the fluid contribution to the total nominal stress increases notably. The effect of the viscosity on the fluid nominal stress can also be seen in the corresponding stress-stretch curves in <xref ref-type="fig" rid="F8">Figure&#x20;8</xref>, bottom right. Depending on <italic>&#x3b7;</italic>, the amount of stretch at which the maximum fluid stress is reached shifts. In addition, both viscous and porous dissipation increase significantly for increasing viscosity (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> D3 and D4). As expected, also the stress relaxed after 5&#xa0;min during stress relaxation experiments increases with increasing <italic>&#x3b7;</italic> (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> D5). Finally, the viscosity largely affects the effective modulus from indentation simulations (see <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> D6)&#x2014;more than any other material parameter.</p>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>4 Discussion</title>
<p>In this work, we have used a poro-viscoelastic computational model for brain tissue behavior to systematically analyze the viscous and porous contributions to the quasi-static response recorded during common biomechanical testing setups, i.e.,&#x20;large-strain compression and tension as well as indentation experiments. Through systematic parameter studies, we have demonstrated the effects of the initial intrinsic permeability, shear moduli, nonlinearity, and viscosity on the test-setup-dependent recorded mechanical response and associated read-outs. Our analyses allow us to evaluate and explain differences in the reported data on human brain tissue mechanics that stem from poro-viscoelastic effects in combination with different drainage and loading conditions that differ greatly depending on the experimental procedure.</p>
<sec id="s4-1">
<title>4.1 The Poro-Viscoelastic Nature of Brain Tissue Explains Discrepancies Between Indentation and Compression Experiments</title>
<p>Common biomechanical testing techniques to quantify the quasi-static, continuum scale, region-dependent mechanics of brain tissue include indentation experiments (<xref ref-type="bibr" rid="B52">Van Dommelen et&#x20;al., 2010</xref>; <xref ref-type="bibr" rid="B14">Chen et&#x20;al., 2015</xref>; <xref ref-type="bibr" rid="B5">Budday et&#x20;al., 2015a</xref>; <xref ref-type="bibr" rid="B37">MacManus et&#x20;al., 2017</xref>, <xref ref-type="bibr" rid="B36">2018</xref>) and large-strain measurements under multiple loading modes, i.e.,&#x20;compression (<xref ref-type="bibr" rid="B22">Galford and McElhaney, 1970</xref>; <xref ref-type="bibr" rid="B41">Miller and Chinzei, 1997</xref>), tension (<xref ref-type="bibr" rid="B42">Miller and Chinzei, 2002</xref>), shear (<xref ref-type="bibr" rid="B17">Donnelly and Medige, 1997</xref>; <xref ref-type="bibr" rid="B46">Prange and Margulies, 2002</xref>; <xref ref-type="bibr" rid="B13">Chatelin et&#x20;al., 2012</xref>), or combinations thereof (<xref ref-type="bibr" rid="B30">Jin et&#x20;al., 2013</xref>; <xref ref-type="bibr" rid="B7">Budday et&#x20;al., 2017a</xref>). Strikingly, while white matter tissue shows a &#x201c;stiffer&#x201d; response than gray matter during indentation measurements, we observe the opposite trend during large-strain compression, tension, and shear. To confirm this trend, we have tested one and the same human brain tissue specimens with both indentation and large-strain compression&#x2013;tension experiments, as illustrated in <xref ref-type="fig" rid="F1">Figure&#x20;1</xref>. While the effective modulus from indentation is higher for white matter (see <xref ref-type="fig" rid="F1">Figures 1G,H</xref>), the maximum stresses reached during cyclic compression&#x2013;tension and compression relaxation are higher for gray matter tissue (see <xref ref-type="fig" rid="F1">Figures&#x20;1I,J</xref>).</p>
<p>In this study, we have made an effort to trace this observation to the poro-viscoelastic nature of brain tissue&#x2014;and the differences in the permeability, shear moduli, nonlinearity, and viscosity in different regions&#x2014;through systematic numerical simulations. Our results show the tight coupling between the properties of the viscoelastic solid and the fluid behavior; the porous dissipation is highest for intermediate permeabilities and largely depends on the shear moduli, nonlinearity, and viscosity of the solid. Naturally, these complex and nonlinear dependencies cannot be captured by a single effective modulus determined from indentation experiments at relatively low strains or maximum stresses during large-strain loading. Such values may change depending on the loading and boundary conditions and do not necessarily represent the actual stiffness of the material. Since the nonlinearity parameter <italic>&#x3b1;</italic> has an exponential character, for instance, its influence becomes more pronounced for larger deformations during compression and tension experiments than during indentation measurements. Therefore, certain material properties may affect the maximum stresses during large-strain compression differently than the effective modulus from indentation. Our results demonstrate that increasing <inline-formula id="inf55">
<mml:math id="m73">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula> from 3.2 to 8.4&#xa0;kPa leads to an increase in maximum compressive and tensile stresses, while&#x2014;for the same sets of parameters&#x2014;it leads to a decrease in the effective modulus from indentation. We observe a similar but less pronounced effect when increasing the nonlinearity from <italic>&#x3b1;</italic> &#x3d; &#x2212;5 to <italic>&#x3b1;</italic> &#x3d; &#x2212;8. These computationally-observed phenomena can explain the experimental results in <xref ref-type="fig" rid="F1">Figure&#x20;1</xref>, which might seem contradictory at first sight. Interestingly, our previous results indeed suggest that the non-equilibrium shear modulus is higher for cortical gray matter than for white matter (<xref ref-type="bibr" rid="B8">Budday et&#x20;al., 2017b</xref>; <xref ref-type="bibr" rid="B11">Budday and Steinmann, 2018</xref>) in agreement with the results in <xref ref-type="fig" rid="F7">Figure&#x20;7B</xref>. In summary, the different trends for compression and indentation experiments can, on the one hand, be attributed to the complex coupling between porous and viscous effects and the material nonlinearity. On the other hand, these trends can result from different methods used to analyze experimental data. Here, we determined the effective modulus from the averaged contact stiffness over the region between 50 and 100% of the maximum indentation force (as introduced in <xref ref-type="sec" rid="s2-3">Section 2.3</xref>), similar to previous approaches in the literature (<xref ref-type="bibr" rid="B44">Oliver and Pharr, 2004</xref>; <xref ref-type="bibr" rid="B5">Budday et&#x20;al., 2015a</xref>). This ensures to minimize the influence of adhesion (<xref ref-type="bibr" rid="B26">Gupta et&#x20;al., 2007</xref>), but can significantly affect the results for highly nonlinear materials. <xref ref-type="fig" rid="F11">Figure&#x20;11</xref> illustrates that the numerically-predicted indentation curve changes with varying non-equilibrium shear modulus and that it might make a difference to use a different portion of the curve to determine the effective modulus.</p>
<fig id="F11" position="float">
<label>FIGURE 11</label>
<caption>
<p>Indentation test with an indentation depth of 50&#xa0;<italic>&#x3bc;</italic>m. Total reaction force versus indentation depth for <italic>K</italic>
<sub>0</sub> &#x3d; 10<sup>&#x2212;10</sup>&#xa0;mm<sup>2</sup>, <inline-formula id="inf56">
<mml:math id="m74">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:mn>0.32</mml:mn>
<mml:mspace width="0.17em"/>
<mml:mtext>kPa</mml:mtext>
</mml:math>
</inline-formula>, <italic>&#x3b1;</italic>&#x20;&#x3d; &#x2212;8, <italic>&#x3b7;</italic> &#x3d; 14&#xa0;kPa &#x22c5;s and different <inline-formula id="inf57">
<mml:math id="m75">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
<mml:mo>&#x3d;</mml:mo>
<mml:mrow>
<mml:mo stretchy="false">{</mml:mo>
<mml:mrow>
<mml:mn>1.2</mml:mn>
<mml:mo>,</mml:mo>
<mml:mn>3.2</mml:mn>
<mml:mo>,</mml:mo>
<mml:mn>8.4</mml:mn>
</mml:mrow>
<mml:mo stretchy="false">}</mml:mo>
</mml:mrow>
<mml:mspace width="0.17em"/>
<mml:mtext>kPa</mml:mtext>
</mml:math>
</inline-formula>. The effective modulus shown in <xref ref-type="fig" rid="F7">Figure&#x20;7</xref> B6, corresponds to the slope of the fitted lines shown here in&#x20;red.</p>
</caption>
<graphic xlink:href="fmech-07-708350-g011.tif"/>
</fig>
<p>These considerations emphasize that when testing ultrasoft and biphasic materials such as brain tissue, one needs to be particularly careful when post-processing recorded experimental data. Our simulations further show that the fluid flow within and across the boundaries of the sample is key to the overall response of the tissue (as measured by traditional methods). Therefore, also experimental setups should be carefully designed in the future to avoid unwanted effects and measure the particular property relevant for a certain application. In this respect, finite element modeling provides a useful tool to explore the complex behavior under different loading conditions and better understand the role of individual material properties, such as permeability, stiffness, nonlinearity, and viscosity, on the measured response, as discussed in detail in the following.</p>
</sec>
<sec id="s4-2">
<title>4.2 The Role of the Intrinsic Permeability on the Tissue Response</title>
<p>Although the initial intrinsic permeability <italic>K</italic>
<sub>0</sub> barely affects the total nominal stress and effective modulus (see <xref ref-type="fig" rid="F3">Figures 3</xref>, <xref ref-type="fig" rid="F7">7</xref>), the individual fluid and solid contributions change noticeably. The permeability regulates how &#x201c;fast&#x201d; the fluid flow reacts to loading. In addition, our results demonstrate that there are significant local variations in the fluid flow within the sample for the different testing setups investigated here (e.g., see <xref ref-type="fig" rid="F5">Figures 5</xref>, <xref ref-type="fig" rid="F6">6</xref>). We consistently observe that the amount of fluid &#x201c;trapped&#x201d; in the viscoelastic solid network is proportional to the contribution of the fluid part to the biphasic tissue response: Lower intrinsic permeabilities result in a larger fluid contribution to the total nominal stresses (see rows 1,2 and 5 in <xref ref-type="fig" rid="F7">Figure&#x20;7</xref>). From a physical perspective, one can explain these trends considering that lower intrinsic permeabilities result in smaller relative movement between solid and fluid phases and, hence, less overall fluid flowing out of the loaded sample. Therefore, the incompressible fluid is &#x201c;trapped&#x201d; inside the sample and notably contributes to the stress response. For higher permeabilities, in contrast, there is a smaller proportion of fluid component in the biphasic material, so that the solid part must take on a larger part of the&#x20;load.</p>
<p>Interestingly, our simulations further show that variations in the intrinsic permeability can result in extreme differences in the temporal course of the response, as observed in <xref ref-type="fig" rid="F5">Figures 5</xref>, <xref ref-type="fig" rid="F6">6</xref>. Here, we see for both compression relaxation and indentation loading that abrupt changes in loading rate, e.g., from loading to the holding period, can completely reverse the fluid flow and increase its magnitude (<italic>K</italic>
<sub>0</sub> &#x3d; 10<sup>&#x2212;8</sup>&#xa0;mm<sup>2</sup>) or only reduce the magnitude without changing the flow direction (<italic>K</italic>
<sub>0</sub> &#x3d; 10<sup>&#x2212;10</sup>&#xa0;mm<sup>2</sup> and <italic>K</italic>
<sub>0</sub> &#x3d; 10<sup>&#x2212;12</sup>&#xa0;mm<sup>2</sup>). As the fluid flow has a direct impact on the global material response, reliably and accurately assessing the permeability of tissue samples in experiments is key to thoroughly understand how brain tissue deforms under different loading scenarios. This becomes an imperative under &#x2018;&#x201c;real-life&#x201d; loading conditions that are not homogeneous, where we see complex local interactions of the biphasic tissue deformation, seepage velocity and resulting fluid flow directions.</p>
<p>Our results demonstrate that for the testing setups considered here, unconfined large-strain compression and tension as well as indentation experiments, the fluid flow within the sample and across the boundary is not well controlled. Therefore, it may be important to redesign experimental setups in the future in order to avoid unwanted effects of the fluid flow on the measured response, especially when comparing different regions of brain tissue where there seem to be local differences in permeability. This becomes even more relevant as we observed that the fluid flow also depends on the viscoelastic properties (as discussed in detail in the next section) and such coupling effects can lead to additional effects during experiments that are rather related to different boundary conditions than the actual material properties.</p>
</sec>
<sec id="s4-3">
<title>4.3 Coupling Between Viscous and Porous Effects</title>
<p>The thorough exploration of the poro-viscoelastic parameters in our computational model confirms that the viscous and porous responses to loading are highly interrelated. Typically, we associate the fluid constituent behavior to the porous response, while the solid component is linked to the viscous one. Yet, changes in a single parameter, either linked to the viscoelastic solid (<inline-formula id="inf58">
<mml:math id="m76">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, <inline-formula id="inf59">
<mml:math id="m77">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, <italic>&#x3b1;</italic>, <italic>&#x3b7;</italic>) or the pore fluid (<italic>K</italic>
<sub>0</sub>) have considerable effects on both porous and viscous features of the tissue behavior (see rows 3 and 4 in <xref ref-type="fig" rid="F7">Figure&#x20;7</xref>). For all loading cases studied here, the fluid response depends on the stiffness and nonlinearity of the viscoelastic solid in addition to the initial intrinsic permeability. While the latter is evidently the main determinant in the fluid part of the biphasic response, (<xref ref-type="fig" rid="F5">Figures 5</xref>, <xref ref-type="fig" rid="F6">6</xref>), interestingly, also different combinations of the solid parameters <inline-formula id="inf60">
<mml:math id="m78">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mi>&#x221e;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, <inline-formula id="inf61">
<mml:math id="m79">
<mml:msubsup>
<mml:mrow>
<mml:mi>&#x3bc;</mml:mi>
</mml:mrow>
<mml:mrow>
<mml:mn>1</mml:mn>
</mml:mrow>
<mml:mrow>
<mml:mn>0</mml:mn>
</mml:mrow>
</mml:msubsup>
</mml:math>
</inline-formula>, <italic>&#x3b1;</italic>, and <italic>&#x3b7;</italic> have a noticeable effect (see fluid nominal stress in <xref ref-type="fig" rid="F8">Figure&#x20;8</xref>, pore pressure in <xref ref-type="fig" rid="F9">Figure&#x20;9</xref> and seepage velocity in <xref ref-type="fig" rid="F10">Figure&#x20;10</xref>). These observations agree well with our previous findings (<xref ref-type="bibr" rid="B49">Reiter et&#x20;al., 2021</xref>), showing that cells inside brain tissue still keep moving in the direction of loading during the holding period of compression relaxation experiments&#x2014;only with decreasing velocity. This further supports the idea that the porous and viscous contributions to the response of brain tissue are strongly coupled, i.e.,&#x20;the moving fluid might exert a drag force on cell bodies and thereby displace&#x20;them.</p>
<p>Porous dissipation results, surprisingly, are not directly proportional to the initial intrinsic permeability (see <xref ref-type="fig" rid="F4">Figure&#x20;4</xref> center and <xref ref-type="fig" rid="F7">Figure&#x20;7</xref>, row 4), but rather peak for intermediate values of <italic>K</italic>
<sub>0</sub>. This hints at complex interactions between the deforming viscoelastic solid and the fluid flow behavior under loading. From a numerical perspective, and considering the definitions (11) and (12), the unexpected response can be attributed to the coupling between the pressure and displacement variables. Solid deformation and stresses are affected by a hydrostatic component due to the fluid constituent exerting pressure on the solid. At the same time, seepage velocity incorporates the effect of the deformations in the changing intrinsic permeability value to account for the &#x201c;closing&#x201d; of the pores under loading. However, for different values of the solid parameters and loading conditions, we observe important variations in local pressure distributions and, hence, in the gradients of pressure, which determine seepage velocity together with the intrinsic permeability. Consequently, from a computational perspective, the pressure variable is the key&#x2014;and its effects are nuanced as we have repeatedly observed in our simulations.</p>
<p>Our results indicate that the viscoelastic solid influences the porous response to a much larger extent than the fluid constituent affects the viscous response. While the solid nominal stress shows a slight dependence on the intrinsic permeability (<xref ref-type="fig" rid="F3">Figure&#x20;3</xref> center), the accumulated viscous dissipation remains unaltered by the change in <italic>K</italic>
<sub>0</sub> (see <xref ref-type="fig" rid="F4">Figure&#x20;4</xref>, left, and <xref ref-type="fig" rid="F7">Figure&#x20;7</xref>, row 3). These observations are highly relevant when aiming to design experimental procedures and protocols to reliably determine poro- and viscoelastic material parameters for brain tissue. We could previously show that a combination of cylic and stress relaxation experiments under multiple loading modes are well suited to calibrate viscoelastic material parameters (<xref ref-type="bibr" rid="B8">Budday et&#x20;al., 2017b</xref>; <xref ref-type="bibr" rid="B11">Budday and Steinmann, 2018</xref>). By considering multiple loading modes simultaneously, one can avoid that the optimization problem is ill-posed. To reliably calibrate poro-viscoelastic models for brain tissue, however, experimental designs need to be adopted to test the unique property of interest. Ideally, experimental setups are optimized under close consideration of the modeling framework and with the help of computational simulations. This has the advantage that the effects we have observed in the current study can be taken into account.</p>
</sec>
<sec id="s4-4">
<title>4.4 Perspectives and Future Directions</title>
<p>In this study, we have performed computational parameter studies to systematically understand the individual viscous and porous contributions to brain tissue behavior under different biomechanical testing conditions, but have not aimed at calibrating material parameters through an inverse parameter identification scheme. The reason for that is that current experimental setups and data available in the literature are not sufficient to reliably determine the model parameters. For the setups investigated here, for instance, which have previously been successfully used to calibrate viscoelastic material parameters (<xref ref-type="bibr" rid="B8">Budday et&#x20;al., 2017b</xref>; <xref ref-type="bibr" rid="B11">Budday and Steinmann, 2018</xref>), porous and viscous effects are strongly coupled. This makes it difficult to uniquely identify poro-viscoelastic parameter sets. Also, previously reported viscoelastic parameters are not readily transferable. As an example, the first Lam&#xe9; parameter in our poro-viscoelastic model is not equivalent to the first Lam&#xe9; parameter in a single-phase viscoelastic material because ours only represents the solid component behavior, while the latter implicitly incorporates the whole tissue behavior, including the fluid contribution to the material bulk behavior. Therefore, in the future we plan to design new experimental setups and protocols, e.g., to determine the intrinsic permeability of brain tissue, under close consideration of the continuum mechanics modeling framework and systematic predictions from finite element simulations. The latter are a valuable tool to evaluate the sensitivity of certain parameters towards specific loading conditions and, like this, optimize experiments. This will eventually allow us to develop more realistic simulations for personalized medicine.</p>
<p>We note that we only focused on quasi-static experiments in the current work, which are relevant for applications on intermediate time scales, such as the well-known phenomenon of brain shift: When the skull is open during a neurosurgery, brain tissue immediately undergoes large deformations and &#x201c;shifts&#x201d; compared to the situation on preoperative images. This is a major issue in neuronavigation (<xref ref-type="bibr" rid="B23">Gerard et&#x20;al., 2017</xref>). In the future, the model can also be adopted to study effects during further experimental setups, for instance magnetic resonance elastography (MRE) and ultrasound elastography (USE), where the brain is loaded under small strains at high frequencies. Importantly, these techniques allow for <italic>in vivo</italic> measurements. Therefore, it will be interesting to investigate, on the one hand, the capability of the model to capture the tissue behavior in this small-strain high-frequency regime, and, on the other hand, to evaluate the suitability of <italic>in vivo</italic> measurements for the calibration of biphasic, large-strain mechanical models as the one presented here. Expanding our numerical inquires to additional experimental setups will also provide a more comprehensive set of data to analyze the general sensitivity of the model parameters.</p>
<p>From a purely modeling perspective, it would be interesting to challenge certain assumptions made in the current form of the formulation. In particular, an alternative to Darcy&#x2019;s law for the fluid behavior would likely have a significant impact on the results, especially the effect of the intrinsic permeability. For example, one could introduce a direct solid-dependence in the definition of the volume-weighted seepage velocity (11) to model stress-assisted diffusion. Regarding the well-known regional differences in brain tissue, these could be numerically investigated in several ways, e.g., with a non-isotropic permeability tensor and/or viscous evolution equation that better reflect the local microstructure of the tissue. In addition, adhesion effects could be introduced. Finally, for certain applications, it may be necessary to incorporate the effects of gravity as well as an osmotic pressure to predict swelling in the brain. The computational approach presented in this study provides a robust numerical framework on which to build increasingly sophisticated models tailored to specific applications.</p>
</sec>
</sec>
</body>
<back>
<sec id="s5">
<title>Data Availability Statement</title>
<p>The raw data supporting the conclusions of this article will be made available by the authors, without undue reservation.</p>
</sec>
<sec id="s6">
<title>Ethics Statement</title>
<p>The studies involving human participants were reviewed and approved by Ethics Committee of Friedrich-Alexander-University Erlangen-N&#xfc;rnberg, Germany, with approval number 405&#x20;18 B. The patients/participants provided their written informed consent to participate in this&#x20;study.</p>
</sec>
<sec id="s7">
<title>Author Contributions</title>
<p>EC and SB conceptualized the study. PS, GAH, EC, and SB developed the model. EC implemented the initial computational code. AG implemented the numerical setups and performed the simulations. AG analyzed the computational data and prepared the figures with the help of EC. FP provided human brain tissue. NR performed the mechanical experiments and analyzed the corresponding data. AG, EC, and SB wrote the first draft. GAH, PS, EC and SB acquired funding. SB supervised the project. All authors have discussed the results, reviewed and edited the final manuscript.</p>
</sec>
<sec id="s8">
<title>Funding</title>
<p>We gratefully acknowledge the funding by the Deutsche Forschungsgemeinschaft (DFG, German Research Foundation) through the grants BU 3728/1-1 to SB, BU 3728/3-1&#x2014;STE 544/70-1 to SB, PS and GH, as well as PA 738/15-1 to FP. This project has received funding from the European Union&#x2019;s Horizon 2020 research and innovation programme under the Marie Sklodowska-Curie grant agreement No 841047 to&#x20;EC.</p>
</sec>
<sec sec-type="COI-statement" id="s9">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<ack>
<p>We cordially thank Sarah Nistler for her valuable help&#x20;in&#x20;performing the indentation experiments as well&#x20;as&#x20;Lars Br&#xe4;uer and Lisa Stache for preparing the human&#x20;brain.</p>
</ack>
<sec id="s11">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmech.2021.708350/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmech.2021.708350/full&#x23;supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="Video9.mp4" id="SM1" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video3.mp4" id="SM2" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Presentation1.pdf" id="SM3" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="DataSheet1.zip" id="SM4" mimetype="application/zip" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video8.mp4" id="SM5" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video14.mp4" id="SM6" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video11.mp4" id="SM7" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video15.mp4" id="SM8" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video4.mp4" id="SM9" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video7.mp4" id="SM10" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video10.mp4" id="SM11" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video2.mp4" id="SM12" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video5.mp4" id="SM13" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video1.mp4" id="SM14" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video13.mp4" id="SM15" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video6.mp4" id="SM16" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
<supplementary-material xlink:href="Video12.mp4" id="SM17" mimetype="application/mp4" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Angeli</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Stylianopoulos</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Biphasic Modeling of Brain Tumor Biomechanics and Response to Radiation Treatment</article-title>. <source>J.&#x20;Biomech.</source> <volume>49</volume>, <fpage>1524</fpage>&#x2013;<lpage>1531</lpage>. <pub-id pub-id-type="doi">10.1016/j.jbiomech.2016.03.029</pub-id> </citation>
</ref>
<ref id="B2">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Arndt</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Bangerth</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Blais</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Clevenger</surname>
<given-names>T. C.</given-names>
</name>
<name>
<surname>Fehling</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Grayver</surname>
<given-names>A. V.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>The deal.II Library, Version 9.2</article-title>. <source>J.&#x20;Numer. Maths. 0</source> <volume>28</volume> (<issue>3</issue>), <fpage>131</fpage>&#x2013;<lpage>146</lpage>. <pub-id pub-id-type="doi">10.1515/jnma-2020-0043</pub-id> </citation>
</ref>
<ref id="B3">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Barnes</surname>
<given-names>J.&#x20;M.</given-names>
</name>
<name>
<surname>Przybyla</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Weaver</surname>
<given-names>V. M.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Tissue Mechanics Regulate Brain Development, Homeostasis and Disease</article-title>. <source>J.&#x20;Cell. Sci.</source> <volume>130</volume>, <fpage>71</fpage>&#x2013;<lpage>82</lpage>. <pub-id pub-id-type="doi">10.1242/jcs.191742</pub-id> </citation>
</ref>
<ref id="B4">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bilston</surname>
<given-names>L. E.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Phan-Thien</surname>
<given-names>N.</given-names>
</name>
</person-group> (<year>2001</year>). <article-title>Large Strain Behaviour of Brain Tissue in Shear: Some Experimental Data and Differential Constitutive Model</article-title>. <source>Biorheology</source> <volume>38</volume>, <fpage>335</fpage>&#x2013;<lpage>345</lpage>. </citation>
</ref>
<ref id="B5">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Budday</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Nay</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>de Rooij</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Steinmann</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Wyrobek</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Ovaert</surname>
<given-names>T. C.</given-names>
</name>
<etal/>
</person-group> (<year>2015a</year>). <article-title>Mechanical Properties of gray and white Matter Brain Tissue by Indentation</article-title>. <source>J.&#x20;Mech. Behav. Biomed. Mater.</source> <volume>46</volume>, <fpage>318</fpage>&#x2013;<lpage>330</lpage>. <pub-id pub-id-type="doi">10.1016/j.jmbbm.2015.02.024</pub-id> </citation>
</ref>
<ref id="B6">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Budday</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Ovaert</surname>
<given-names>T. C.</given-names>
</name>
<name>
<surname>Holzapfel</surname>
<given-names>G. A.</given-names>
</name>
<name>
<surname>Steinmann</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Kuhl</surname>
<given-names>E.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Fifty Shades of Brain: A Review on the Mechanical Testing and Modeling of Brain Tissue</article-title>. <source>Arch. Comput. Methods Eng.</source> <volume>27</volume>, <fpage>1187</fpage>&#x2013;<lpage>1230</lpage>. <pub-id pub-id-type="doi">10.1007/s11831-019-09352-w</pub-id> </citation>
</ref>
<ref id="B7">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Budday</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Sommer</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Birkl</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Langkammer</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Haybaeck</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Kohnert</surname>
<given-names>J.</given-names>
</name>
<etal/>
</person-group> (<year>2017a</year>). <article-title>Mechanical Characterization of Human Brain Tissue</article-title>. <source>Acta Biomater.</source> <volume>48</volume>, <fpage>319</fpage>&#x2013;<lpage>340</lpage>. <pub-id pub-id-type="doi">10.1016/j.actbio.2016.10.036</pub-id> </citation>
</ref>
<ref id="B8">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Budday</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Sommer</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Haybaeck</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Steinmann</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Holzapfel</surname>
<given-names>G. A.</given-names>
</name>
<name>
<surname>Kuhl</surname>
<given-names>E.</given-names>
</name>
</person-group> (<year>2017b</year>). <article-title>Rheological Characterization of Human Brain Tissue</article-title>. <source>Acta Biomater.</source> <volume>60</volume>, <fpage>315</fpage>&#x2013;<lpage>329</lpage>. <pub-id pub-id-type="doi">10.1016/j.actbio.2017.06.024</pub-id> </citation>
</ref>
<ref id="B9">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Budday</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Sommer</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Steinmann</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Holzapfel</surname>
<given-names>G. A.</given-names>
</name>
<name>
<surname>Kuhl</surname>
<given-names>E.</given-names>
</name>
</person-group> (<year>2017c</year>). <article-title>Viscoelastic Parameter Identification of Human Brain Tissue</article-title>. <source>J.&#x20;Mech. Behav. Biomed. Mater.</source> <volume>74</volume>, <fpage>463</fpage>&#x2013;<lpage>476</lpage>. <pub-id pub-id-type="doi">10.1016/j.jmbbm.2017.07.014</pub-id> </citation>
</ref>
<ref id="B10">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Budday</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Steinmann</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Kuhl</surname>
<given-names>E.</given-names>
</name>
</person-group> (<year>2015b</year>). <article-title>Physical Biology of Human Brain Development</article-title>. <source>Front. Cell. Neurosci.</source> <volume>9</volume>, <fpage>257</fpage>. <pub-id pub-id-type="doi">10.3389/fncel.2015.00257</pub-id> </citation>
</ref>
<ref id="B11">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Budday</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Steinmann</surname>
<given-names>P.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>On the Influence of Inhomogeneous Stiffness and Growth on Mechanical Instabilities in the Developing Brain</article-title>. <source>Int. J.&#x20;Sol. Structures</source> <volume>132-133</volume>, <fpage>31</fpage>&#x2013;<lpage>41</lpage>. <pub-id pub-id-type="doi">10.1016/j.ijsolstr.2017.08.010</pub-id> </citation>
</ref>
<ref id="B12">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chatelin</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Constantinesco</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Willinger</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>Fifty Years of Brain Tissue Mechanical Testing: from <italic>In Vitro</italic> to <italic>In Vivo</italic> Investigations</article-title>. <source>Biorheology</source> <volume>47</volume>, <fpage>255</fpage>&#x2013;<lpage>276</lpage>. <pub-id pub-id-type="doi">10.3233/bir-2010-0576</pub-id> </citation>
</ref>
<ref id="B13">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chatelin</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Vappou</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Roth</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Raul</surname>
<given-names>J.-S.</given-names>
</name>
<name>
<surname>Willinger</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Towards Child versus Adult Brain Mechanical Properties</article-title>. <source>J.&#x20;Mech. Behav. Biomed. Mater.</source> <volume>6</volume>, <fpage>166</fpage>&#x2013;<lpage>173</lpage>. <pub-id pub-id-type="doi">10.1016/j.jmbbm.2011.09.013</pub-id> </citation>
</ref>
<ref id="B14">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chen</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Zhou</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Yue</surname>
<given-names>H.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Mechanical Properties of Porcine Brain Tissue in the Coronal Plane: Interregional Variations of the corona Radiata</article-title>. <source>Ann. Biomed. Eng.</source> <volume>43</volume>, <fpage>2903</fpage>&#x2013;<lpage>2910</lpage>. <pub-id pub-id-type="doi">10.1007/s10439-015-1350-3</pub-id> </citation>
</ref>
<ref id="B15">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cheng</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Bilston</surname>
<given-names>L. E.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>Unconfined Compression of white Matter</article-title>. <source>J.&#x20;Biomech.</source> <volume>40</volume>, <fpage>117</fpage>&#x2013;<lpage>124</lpage>. <pub-id pub-id-type="doi">10.1016/j.jbiomech.2005.11.004</pub-id> </citation>
</ref>
<ref id="B16">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Comellas</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Budday</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Pelteret</surname>
<given-names>J.-P.</given-names>
</name>
<name>
<surname>Holzapfel</surname>
<given-names>G. A.</given-names>
</name>
<name>
<surname>Steinmann</surname>
<given-names>P.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Modeling the Porous and Viscous Responses of Human Brain Tissue Behavior</article-title>. <source>Comput. Methods Appl. Mech. Eng.</source> <volume>369</volume>, <fpage>113128</fpage>. <pub-id pub-id-type="doi">10.1016/j.cma.2020.113128</pub-id> </citation>
</ref>
<ref id="B17">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Donnelly</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Medige</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>1997</year>). <article-title>Shear Properties of Human Brain Tissue</article-title>. <source>J.&#x20;Biomech. Eng.</source> <volume>119</volume>, <fpage>423</fpage>&#x2013;<lpage>432</lpage>. <pub-id pub-id-type="doi">10.1115/1.2798289</pub-id> </citation>
</ref>
<ref id="B18">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ehlers</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Eipper</surname>
<given-names>G.</given-names>
</name>
</person-group> (<year>1999</year>). <article-title>Finite Elastic Deformations in Liquid-Saturated and Empty Porous Solids</article-title>. <source>Transp. Porous Media</source> <volume>34</volume>, <fpage>179</fpage>&#x2013;<lpage>191</lpage>. <pub-id pub-id-type="doi">10.1023/A:1006565509095</pub-id> </citation>
</ref>
<ref id="B19">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ehlers</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Wagner</surname>
<given-names>A.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Multi-component Modelling of Human Brain Tissue: a Contribution to the Constitutive and Computational Description of Deformation, Flow and Diffusion Processes with Application to the Invasive Drug-Delivery Problem</article-title>. <source>Comput. Methods Biomech. Biomed. Engin.</source> <volume>18</volume>, <fpage>861</fpage>&#x2013;<lpage>879</lpage>. <pub-id pub-id-type="doi">10.1080/10255842.2013.853754</pub-id> </citation>
</ref>
<ref id="B20">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fletcher</surname>
<given-names>T. L.</given-names>
</name>
<name>
<surname>Wirthl</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Kolias</surname>
<given-names>A. G.</given-names>
</name>
<name>
<surname>Adams</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Hutchinson</surname>
<given-names>P. J.&#x20;A.</given-names>
</name>
<name>
<surname>Sutcliffe</surname>
<given-names>M. P. F.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Modelling of Brain Deformation after Decompressive Craniectomy</article-title>. <source>Ann. Biomed. Eng.</source> <volume>44</volume>, <fpage>3495</fpage>&#x2013;<lpage>3509</lpage>. <pub-id pub-id-type="doi">10.1007/s10439-016-1666-710.1007/s10439-016-1666-7</pub-id> </citation>
</ref>
<ref id="B21">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Franceschini</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Bigoni</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Regitnig</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Holzapfel</surname>
<given-names>G. A.</given-names>
</name>
</person-group> (<year>2006</year>). <article-title>Brain Tissue Deforms Similarly to Filled Elastomers and Follows Consolidation Theory</article-title>. <source>J.&#x20;Mech. Phys. Sol.</source> <volume>54</volume>, <fpage>2592</fpage>&#x2013;<lpage>2620</lpage>. <pub-id pub-id-type="doi">10.1016/j.jmps.2006.05.004</pub-id> </citation>
</ref>
<ref id="B22">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Galford</surname>
<given-names>J.&#x20;E.</given-names>
</name>
<name>
<surname>McElhaney</surname>
<given-names>J.&#x20;H.</given-names>
</name>
</person-group> (<year>1970</year>). <article-title>A Viscoelastic Study of Scalp, Brain, and Dura</article-title>. <source>J.&#x20;Biomech.</source> <volume>3</volume>, <fpage>211</fpage>&#x2013;<lpage>221</lpage>. <pub-id pub-id-type="doi">10.1016/0021-9290(70)90007-2</pub-id> </citation>
</ref>
<ref id="B23">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gerard</surname>
<given-names>I. J.</given-names>
</name>
<name>
<surname>Kersten-Oertel</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Petrecca</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Sirhan</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Hall</surname>
<given-names>J.&#x20;A.</given-names>
</name>
<name>
<surname>Collins</surname>
<given-names>D. L.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Brain Shift in Neuronavigation of Brain Tumors: A Review</article-title>. <source>Med. Image Anal.</source> <volume>35</volume>, <fpage>403</fpage>&#x2013;<lpage>420</lpage>. <pub-id pub-id-type="doi">10.1016/j.media.2016.08.007</pub-id> </citation>
</ref>
<ref id="B24">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gerischer</surname>
<given-names>L. M.</given-names>
</name>
<name>
<surname>Fehlner</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>K&#xf6;be</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Prehn</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Antonenko</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Grittner</surname>
<given-names>U.</given-names>
</name>
<etal/>
</person-group> (<year>2018</year>). <article-title>Combining Viscoelasticity, Diffusivity and Volume of the hippocampus for the Diagnosis of Alzheimer&#x2019;s Disease Based on Magnetic Resonance Imaging</article-title>. <source>NeuroImage: Clin.</source> <volume>18</volume>, <fpage>485</fpage>&#x2013;<lpage>493</lpage>. <pub-id pub-id-type="doi">10.1016/j.nicl.2017.12.023</pub-id> </citation>
</ref>
<ref id="B25">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Goriely</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Geers</surname>
<given-names>M. G.</given-names>
</name>
<name>
<surname>Holzapfel</surname>
<given-names>G. A.</given-names>
</name>
<name>
<surname>Jayamohan</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>J&#xe9;rusalem</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Sivaloganathan</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2015</year>). <article-title>Mechanics of the Brain: Perspectives, Challenges, and Opportunities</article-title>. <source>Biomech. Model. Mechanobiol.</source> <volume>14</volume>, <fpage>931</fpage>&#x2013;<lpage>965</lpage>. <pub-id pub-id-type="doi">10.1007/s10237-015-0662-4</pub-id> </citation>
</ref>
<ref id="B26">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gupta</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Carrillo</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Pruitt</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Puttlitz</surname>
<given-names>C.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>Adhesive Forces Significantly Affect Elastic Modulus Determination of Soft Polymeric Materials in Nanoindentation</article-title>. <source>Mater. Lett.</source> <volume>61</volume>, <fpage>448</fpage>&#x2013;<lpage>451</lpage>. <pub-id pub-id-type="doi">10.1016/j.matlet.2006.04.078</pub-id> </citation>
</ref>
<ref id="B27">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hasan</surname>
<given-names>M. M.</given-names>
</name>
<name>
<surname>Drapaca</surname>
<given-names>C. S.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>A Poroelastic-Viscoelastic Limit for Modeling Brain Biomechanics</article-title>. <source>Mater. Res. Soc. Symp. Proc.</source> <volume>1753</volume>, <fpage>53</fpage>&#x2013;<lpage>59</lpage>. <pub-id pub-id-type="doi">10.1557/opl.2015.111</pub-id> </citation>
</ref>
<ref id="B28">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hemphill</surname>
<given-names>M. A.</given-names>
</name>
<name>
<surname>Dauth</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Yu</surname>
<given-names>C. J.</given-names>
</name>
<name>
<surname>Dabiri</surname>
<given-names>B. E.</given-names>
</name>
<name>
<surname>Parker</surname>
<given-names>K. K.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Traumatic Brain Injury and the Neuronal Microenvironment: A Potential Role for Neuropathological Mechanotransduction</article-title>. <source>Neuron</source> <volume>85</volume>, <fpage>1177</fpage>&#x2013;<lpage>1192</lpage>. <pub-id pub-id-type="doi">10.1016/j.neuron.2015.02.041</pub-id> </citation>
</ref>
<ref id="B29">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hosseini-Farid</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Ramzanpour</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>McLean</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Ziejewski</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Karami</surname>
<given-names>G.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>A Poro-Hyper-Viscoelastic Rate-dependent Constitutive Modeling for the Analysis of Brain Tissues</article-title>. <source>J.&#x20;Mech. Behav. Biomed. Mater.</source> <volume>102</volume>, <fpage>103475</fpage>. <pub-id pub-id-type="doi">10.1016/J.JMBBM.2019.103475</pub-id> </citation>
</ref>
<ref id="B30">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jin</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Zhu</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Mao</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Shen</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Yang</surname>
<given-names>K. H.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>A Comprehensive Experimental Study on Material Properties of Human Brain Tissue</article-title>. <source>J.&#x20;Biomech.</source> <volume>46</volume>, <fpage>2795</fpage>&#x2013;<lpage>2801</lpage>. <pub-id pub-id-type="doi">10.1016/j.jbiomech.2013.09.001</pub-id> </citation>
</ref>
<ref id="B31">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Keating</surname>
<given-names>C. E.</given-names>
</name>
<name>
<surname>Cullen</surname>
<given-names>D. K.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Mechanosensation in Traumatic Brain Injury</article-title>. <source>Neurobiol. Dis.</source> <volume>148</volume>, <fpage>105210</fpage>. <pub-id pub-id-type="doi">10.1016/j.nbd.2020.105210</pub-id> </citation>
</ref>
<ref id="B32">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kim</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Min</surname>
<given-names>B.-K.</given-names>
</name>
<name>
<surname>Park</surname>
<given-names>D.-H.</given-names>
</name>
<name>
<surname>Hawi</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Kim</surname>
<given-names>B.-J.</given-names>
</name>
<name>
<surname>Czosnyka</surname>
<given-names>Z.</given-names>
</name>
<etal/>
</person-group> (<year>2015</year>). <article-title>Porohyperelastic Anatomical Models for Hydrocephalus and Idiopathic Intracranial Hypertension</article-title>. <source>J.&#x20;Neurosurg.</source> <volume>122</volume>, <fpage>1</fpage>&#x2013;<lpage>11</lpage>. <pub-id pub-id-type="doi">10.3171/2014.12.JNS14516</pub-id> </citation>
</ref>
<ref id="B33">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Koser</surname>
<given-names>D. E.</given-names>
</name>
<name>
<surname>Thompson</surname>
<given-names>A. J.</given-names>
</name>
<name>
<surname>Foster</surname>
<given-names>S. K.</given-names>
</name>
<name>
<surname>Dwivedy</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Pillai</surname>
<given-names>E. K.</given-names>
</name>
<name>
<surname>Sheridan</surname>
<given-names>G. K.</given-names>
</name>
<etal/>
</person-group> (<year>2016</year>). <article-title>Mechanosensing Is Critical for Axon Growth in the Developing Brain</article-title>. <source>Nat. Neurosci.</source> <volume>19</volume>, <fpage>1592</fpage>&#x2013;<lpage>1598</lpage>. <pub-id pub-id-type="doi">10.1038/nn.4394</pub-id> </citation>
</ref>
<ref id="B34">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Linka</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Reiter</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>W&#xfc;rges</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Schicht</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Br&#xe4;uer</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Cyron</surname>
<given-names>C. J.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Unraveling the Local Relation between Tissue Composition and Human Brain Mechanics through Machine Learning</article-title>. <source>Front. Bioeng. Biotechnol. Submitted</source> <volume>9</volume>, <fpage>704738</fpage>. <pub-id pub-id-type="doi">10.3389/fbioe.2021.704738</pub-id> </citation>
</ref>
<ref id="B35">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lytton</surname>
<given-names>W. W.</given-names>
</name>
<name>
<surname>Arle</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Bobashev</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Ji</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Klassen</surname>
<given-names>T. L.</given-names>
</name>
<name>
<surname>Marmarelis</surname>
<given-names>V. Z.</given-names>
</name>
<etal/>
</person-group> (<year>2017</year>). <article-title>Multiscale Modeling in the Clinic: Diseases of the Brain and Nervous System</article-title>. <source>Brain Inform.</source> <volume>4</volume>, <fpage>219</fpage>&#x2013;<lpage>230</lpage>. <pub-id pub-id-type="doi">10.1007/s40708-017-0067-5</pub-id> </citation>
</ref>
<ref id="B36">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>MacManus</surname>
<given-names>D. B.</given-names>
</name>
<name>
<surname>Murphy</surname>
<given-names>J.&#x20;G.</given-names>
</name>
<name>
<surname>Gilchrist</surname>
<given-names>M. D.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Mechanical Characterisation of Brain Tissue up to 35% Strain at 1, 10, and 100/s Using a Custom-Built Micro-indentation Apparatus</article-title>. <source>J.&#x20;Mech. Behav. Biomed. Mater.</source> <volume>87</volume>, <fpage>256</fpage>&#x2013;<lpage>266</lpage>. <pub-id pub-id-type="doi">10.1016/j.jmbbm.2018.07.025</pub-id> </citation>
</ref>
<ref id="B37">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>MacManus</surname>
<given-names>D. B.</given-names>
</name>
<name>
<surname>Pierrat</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Murphy</surname>
<given-names>J.&#x20;G.</given-names>
</name>
<name>
<surname>Gilchrist</surname>
<given-names>M. D.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Region and Species Dependent Mechanical Properties of Adolescent and Young Adult Brain Tissue</article-title>. <source>Sci. Rep.</source> <volume>7</volume>, <fpage>13729</fpage>. <pub-id pub-id-type="doi">10.1038/s41598-017-13727-z</pub-id> </citation>
</ref>
<ref id="B38">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Meaney</surname>
<given-names>D. F.</given-names>
</name>
<name>
<surname>Morrison</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Bass</surname>
<given-names>C. D.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>The Mechanics of Traumatic Brain Injury: a Review of what We Know and what We Need to Know for Reducing its Societal burden</article-title>. <source>J.&#x20;Biomech. Eng.</source> <volume>136</volume>, <fpage>021008</fpage>. <pub-id pub-id-type="doi">10.1115/1.4026364</pub-id> </citation>
</ref>
<ref id="B39">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mehrabian</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Abousleiman</surname>
<given-names>Y.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>General Solutions to Poroviscoelastic Model of Hydrocephalic Human Brain Tissue</article-title>. <source>J.&#x20;Theor. Biol.</source> <volume>291</volume>, <fpage>105</fpage>&#x2013;<lpage>118</lpage>. <pub-id pub-id-type="doi">10.1016/j.jtbi.2011.09.011</pub-id> </citation>
</ref>
<ref id="B40">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mehrabian</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Abousleiman</surname>
<given-names>Y. N.</given-names>
</name>
<name>
<surname>Mapstone</surname>
<given-names>T. B.</given-names>
</name>
<name>
<surname>El-Amm</surname>
<given-names>C. A.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Dual-porosity Poroviscoelasticity and Quantitative Hydromechanical Characterization of the Brain Tissue with Experimental Hydrocephalus Data</article-title>. <source>J.&#x20;Theor. Biol.</source> <volume>384</volume>, <fpage>19</fpage>&#x2013;<lpage>32</lpage>. <pub-id pub-id-type="doi">10.1016/j.jtbi.2015.08.001</pub-id> </citation>
</ref>
<ref id="B41">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Miller</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Chinzei</surname>
<given-names>K.</given-names>
</name>
</person-group> (<year>1997</year>). <article-title>Constitutive Modelling of Brain Tissue: experiment and Theory</article-title>. <source>J.&#x20;Biomech.</source> <volume>30</volume>, <fpage>1115</fpage>&#x2013;<lpage>1121</lpage>. <pub-id pub-id-type="doi">10.1016/s0021-9290(97)00092-4</pub-id> </citation>
</ref>
<ref id="B42">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Miller</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Chinzei</surname>
<given-names>K.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Mechanical Properties of Brain Tissue in Tension</article-title>. <source>J.&#x20;Biomech.</source> <volume>35</volume>, <fpage>483</fpage>&#x2013;<lpage>490</lpage>. <pub-id pub-id-type="doi">10.1016/s0021-9290(01)00234-2</pub-id> </citation>
</ref>
<ref id="B43">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Murphy</surname>
<given-names>M. C.</given-names>
</name>
<name>
<surname>Jones</surname>
<given-names>D. T.</given-names>
</name>
<name>
<surname>Jack</surname>
<given-names>C. R.</given-names>
<suffix>Jr</suffix>
</name>
<name>
<surname>Glaser</surname>
<given-names>K. J.</given-names>
</name>
<name>
<surname>Senjem</surname>
<given-names>M. L.</given-names>
</name>
<name>
<surname>Manduca</surname>
<given-names>A.</given-names>
</name>
<etal/>
</person-group> (<year>2016</year>). <article-title>Regional Brain Stiffness Changes across the Alzheimer&#x2019;s Disease Spectrum</article-title>. <source>NeuroImage: Clin.</source> <volume>10</volume>, <fpage>283</fpage>&#x2013;<lpage>290</lpage>. <pub-id pub-id-type="doi">10.1016/j.nicl.2015.12.007</pub-id> </citation>
</ref>
<ref id="B44">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Oliver</surname>
<given-names>W. C.</given-names>
</name>
<name>
<surname>Pharr</surname>
<given-names>G. M.</given-names>
</name>
</person-group> (<year>2004</year>). <article-title>Measurement of Hardness and Elastic Modulus by Instrumented Indentation: Advances in Understanding and Refinements to Methodology</article-title>. <source>J.&#x20;Mater. Res.</source> <volume>19</volume>, <fpage>3</fpage>&#x2013;<lpage>20</lpage>. <pub-id pub-id-type="doi">10.1557/jmr.2004.19.1.3</pub-id> </citation>
</ref>
<ref id="B45">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Park</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Lonsberry</surname>
<given-names>G. E.</given-names>
</name>
<name>
<surname>Gearing</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Levey</surname>
<given-names>A. I.</given-names>
</name>
<name>
<surname>Desai</surname>
<given-names>J.&#x20;P.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Viscoelastic Properties of Human Autopsy Brain Tissues as Biomarkers for Alzheimer&#x2019;s Diseases</article-title>. <source>IEEE Trans. Biomed. Eng.</source> <volume>66</volume>, <fpage>1705</fpage>&#x2013;<lpage>1713</lpage>. <pub-id pub-id-type="doi">10.1109/TBME.2018.2878555</pub-id> </citation>
</ref>
<ref id="B46">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Prange</surname>
<given-names>M. T.</given-names>
</name>
<name>
<surname>Margulies</surname>
<given-names>S. S.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Regional, Directional, and Age-dependent Properties of the Brain Undergoing Large Deformation</article-title>. <source>J.&#x20;Biomech. Eng.</source> <volume>124</volume>, <fpage>244</fpage>&#x2013;<lpage>252</lpage>. <pub-id pub-id-type="doi">10.1115/1.1449907</pub-id> </citation>
</ref>
<ref id="B47">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Prevost</surname>
<given-names>T. P.</given-names>
</name>
<name>
<surname>Balakrishnan</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Suresh</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Socrate</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Biomechanics of Brain Tissue</article-title>. <source>Acta Biomater.</source> <volume>7</volume>, <fpage>83</fpage>&#x2013;<lpage>95</lpage>. <pub-id pub-id-type="doi">10.1016/j.actbio.2010.06.035</pub-id> </citation>
</ref>
<ref id="B48">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rashid</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Destrade</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Gilchrist</surname>
<given-names>M. D.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Temperature Effects on Brain Tissue in Compression</article-title>. <source>J.&#x20;Mech. Behav. Biomed. Mater.</source> <volume>14</volume>, <fpage>113</fpage>&#x2013;<lpage>118</lpage>. <pub-id pub-id-type="doi">10.1016/j.jmbbm.2012.04.005</pub-id> </citation>
</ref>
<ref id="B49">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Reiter</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Roy</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Paulsen</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Budday</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Insights into the Microstructural Origin of Brain Viscoelasticity</article-title>. <source>J.&#x20;Elasticity</source>. <pub-id pub-id-type="doi">10.1007/s10659-021-09814-y</pub-id> </citation>
</ref>
<ref id="B50">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Terzano</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Spagnoli</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Dini</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Forte</surname>
<given-names>A. E.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Fluid-solid Interaction in the Rate-dependent Failure of Brain Tissue and Biomimicking Gels</article-title>. <source>J.&#x20;Mech. Behav. Biomed. Mater.</source>, <fpage>104530</fpage>. <pub-id pub-id-type="doi">10.1016/j.jmbbm.2021.104530</pub-id> </citation>
</ref>
<ref id="B51">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Thompson</surname>
<given-names>A. J.</given-names>
</name>
<name>
<surname>Pillai</surname>
<given-names>E. K.</given-names>
</name>
<name>
<surname>Dimov</surname>
<given-names>I. B.</given-names>
</name>
<name>
<surname>Foster</surname>
<given-names>S. K.</given-names>
</name>
<name>
<surname>Holt</surname>
<given-names>C. E.</given-names>
</name>
<name>
<surname>Franze</surname>
<given-names>K.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Rapid Changes in Tissue Mechanics Regulate Cell Behaviour in the Developing Embryonic Brain</article-title>. <source>eLife</source> <volume>8</volume>, <fpage>e39356</fpage>. <pub-id pub-id-type="doi">10.7554/eLife.39356</pub-id> </citation>
</ref>
<ref id="B52">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Van Dommelen</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Van der Sande</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Hrapko</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Peters</surname>
<given-names>G.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>Mechanical Properties of Brain Tissue by Indentation: Interregional Variation</article-title>. <source>J.&#x20;Mech. Behav. Biomed. Mater.</source> <volume>3</volume>, <fpage>158</fpage>&#x2013;<lpage>166</lpage>. <pub-id pub-id-type="doi">10.1016/j.jmbbm.2009.09.001</pub-id> </citation>
</ref>
<ref id="B53">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Weickenmeier</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Butler</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Young</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Goriely</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kuhl</surname>
<given-names>E.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>The Mechanics of Decompressive Craniectomy: Personalized Simulations</article-title>. <source>Comp. Methods Appl. Mech. Eng.</source> <volume>314</volume>, <fpage>180</fpage>&#x2013;<lpage>195</lpage>. <pub-id pub-id-type="doi">10.1016/j.cma.2016.08.011</pub-id> </citation>
</ref>
<ref id="B54">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Whittall</surname>
<given-names>K. P.</given-names>
</name>
<name>
<surname>Mackay</surname>
<given-names>A. L.</given-names>
</name>
<name>
<surname>Graeb</surname>
<given-names>D. A.</given-names>
</name>
<name>
<surname>Nugent</surname>
<given-names>R. A.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>D. K.</given-names>
</name>
<name>
<surname>Paty</surname>
<given-names>D. W.</given-names>
</name>
</person-group> (<year>1997</year>). <article-title>
<italic>In Vivo</italic> measurement of T2 Distributions and Water Contents in normal Human Brain</article-title>. <source>Magn. Reson. Med.</source> <volume>37</volume>, <fpage>34</fpage>&#x2013;<lpage>43</lpage>. <pub-id pub-id-type="doi">10.1002/mrm.1910370107</pub-id> </citation>
</ref>
</ref-list>
</back>
</article>