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<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Microbiol.</journal-id>
<journal-title>Frontiers in Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Microbiol.</abbrev-journal-title>
<issn pub-type="epub">1664-302X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmicb.2017.01344</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Microbiology</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Detection and Characterization of <italic>Staphylococcus aureus</italic> and Methicillin-Resistant <italic>S. aureus</italic> in Foods Confiscated in EU Borders</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Rodr&#x00ED;guez-L&#x00E1;zaro</surname> <given-names>David</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn001"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/114703/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Oniciuc</surname> <given-names>Elena-Alexandra</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/307403/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Garc&#x00ED;a</surname> <given-names>Patricia G.</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/453462/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Gallego</surname> <given-names>David</given-names></name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/451553/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Fern&#x00E1;ndez-Natal</surname> <given-names>Isabel</given-names></name>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
<xref ref-type="aff" rid="aff6"><sup>6</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/451685/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Dominguez-Gil</surname> <given-names>Marta</given-names></name>
<xref ref-type="aff" rid="aff7"><sup>7</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Eiros-Bouza</surname> <given-names>Jos&#x00E9; M.</given-names></name>
<xref ref-type="aff" rid="aff7"><sup>7</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/405286/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Wagner</surname> <given-names>Martin</given-names></name>
<xref ref-type="aff" rid="aff8"><sup>8</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/254858/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Nicolau</surname> <given-names>Anca I.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/269090/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Hern&#x00E1;ndez</surname> <given-names>Marta</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<xref ref-type="aff" rid="aff9"><sup>9</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/379990/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Microbiology Division, Department of Biotechnology and Food Science, Faculty of Science, University of Burgos</institution> <country>Burgos, Spain</country></aff>
<aff id="aff2"><sup>2</sup><institution>Faculty of Food Science and Engineering, Dunarea de Jos University of Galati</institution> <country>Galati, Romania</country></aff>
<aff id="aff3"><sup>3</sup><institution>Laboratory of Molecular Biology and Microbiology, Instituto Tecnol&#x00F3;gico Agrario de Castilla y Le&#x00F3;n</institution> <country>Valladolid, Spain</country></aff>
<aff id="aff4"><sup>4</sup><institution>Dependencia de Sanidad de Vizcaya, Delegaci&#x00F3;n del Gobierno en el Pa&#x00ED;s Vasco</institution> <country>Bilbao, Spain</country></aff>
<aff id="aff5"><sup>5</sup><institution>Department of Clinical Microbiology, Complejo Asistencial Universitario de Le&#x00F3;n</institution> <country>Le&#x00F3;n, Spain</country></aff>
<aff id="aff6"><sup>6</sup><institution>Institute of Biomedicine, University of Le&#x00F3;n</institution> <country>Le&#x00F3;n, Spain</country></aff>
<aff id="aff7"><sup>7</sup><institution>Department of Clinical Microbiology, University Hospital Rio Hortega</institution> <country>Valladolid, Spain</country></aff>
<aff id="aff8"><sup>8</sup><institution>Institute for Milk Hygiene, Milk Technology and Food Science, University of Veterinary Medicine Vienna</institution> <country>Vienna, Austria</country></aff>
<aff id="aff9"><sup>9</sup><institution>Departamento de Ingenier&#x00ED;a Agr&#x00ED;cola y Forestal, Tecnolog&#x00ED;a de los Alimentos, Escuela T&#x00E9;cnica Superior de Ingenier&#x00ED;as Agrarias, Universidad de Valladolid</institution> <country>Palencia, Spain</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: <italic>Paula Teixeira, Universidade Cat&#x00F3;lica Portuguesa, Portugal</italic></p></fn>
<fn fn-type="edited-by"><p>Reviewed by: <italic>Vincenzina Fusco, Consiglio Nazionale delle Ricerche (CNR), Italy; Jorge Pinto Ferreira, Safoso, Switzerland</italic></p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x002A;Correspondence: <italic>David Rodr&#x00ED;guez-L&#x00E1;zaro, <email>rodlazda@gmail.com</email>; <email>drlazaro@ubu.es</email></italic></p></fn>
<fn fn-type="other" id="fn002"><p>This article was submitted to Food Microbiology, a section of the journal Frontiers in Microbiology</p></fn></author-notes>
<pub-date pub-type="epub">
<day>21</day>
<month>07</month>
<year>2017</year>
</pub-date>
<pub-date pub-type="collection">
<year>2017</year>
</pub-date>
<volume>8</volume>
<elocation-id>1344</elocation-id>
<history>
<date date-type="received">
<day>15</day>
<month>06</month>
<year>2017</year>
</date>
<date date-type="accepted">
<day>03</day>
<month>07</month>
<year>2017</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2017 Rodr&#x00ED;guez-L&#x00E1;zaro, Oniciuc, Garc&#x00ED;a, Gallego, Fern&#x00E1;ndez-Natal, Dominguez-Gil, Eiros-Bouza, Wagner, Nicolau and Hern&#x00E1;ndez.</copyright-statement>
<copyright-year>2017</copyright-year>
<copyright-holder>Rodr&#x00ED;guez-L&#x00E1;zaro, Oniciuc, Garc&#x00ED;a, Gallego, Fern&#x00E1;ndez-Natal, Dominguez-Gil, Eiros-Bouza, Wagner, Nicolau and Hern&#x00E1;ndez</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>The aim of the study was to evaluate the potential role of the illegal entry of food in UE in the Methicillin-resistant <italic>S. aureus</italic> (MRSA) spread. We studied the prevalence and characteristics of <italic>Staphylococcus aureus</italic> and MRSA isolated from foods of animal origin confiscated from passengers on flights from 45 non-EU countries from 2012 to 2015 by the Border Authorities at Bilbao International Airport (Spain) and Vienna International Airport (Austria), as well as foods from open markets close to EU land borders. Of 868 food samples tested (diverse meat samples including antelope, duck, guinea pig, pork, rodents, turkey, dairy products, and eggs), 136 (15.7%) were positive for <italic>S. aureus</italic> and 26 (3.0%) for MRSA. All MRSA strains were <italic>mec</italic>A-positive. The prevalence of <italic>S. aureus</italic>-positive dairy samples among food confiscated at Bilbao International Airport was 64.6%, and this airport also had the highest value (11.8%) for MRSA-positive samples. The predominant sequence type was ST5 (30.8%), followed by ST8, ST1649, ST1, and other lineages were found to a lesser extent (ST7, ST22, ST72, ST97, and ST398). Six isolates tested positive for <italic>luk</italic>-PVL genes (SCC<italic>mec</italic> IV subtypes IVc and IVe). Enterotoxin profiling revealed that 19 MRSA strains were enterotoxigenic, harboring one or more <italic>se</italic> genes. The MRSA isolates positive for <italic>luk</italic>-PVL genes were not enterotoxigenic, and none of the isolates tested positive for enterotoxin E. We found 14 resistance profiles, and more than 69% of the MRSA isolates were resistant to three or more types of antimicrobial agents. This finding reveals both the wide diversity of the antimicrobial resistance found in the strains and the capacity to resist not only to beta-lactam drugs. One MRSA strain showed unusual characteristics: it was oxacillin-susceptible, harbored SCC<italic>mec</italic> V, and was positive for <italic>sed, seg</italic>, and <italic>sej</italic> but negative for PVL virulence factors. This study shows the presence of enterotoxigenic HA-, CA-, and LA-MRSA in foods illegally entering the EU, and highlights illegal importation of food as route of enterotoxigenic MRSA spread. Uncontrolled entry of food stuffs into the EU can be a relevant neglected route of MRSA dissemination.</p>
</abstract>
<kwd-group>
<kwd>MRSA</kwd>
<kwd>food contamination</kwd>
<kwd>typing</kwd>
<kwd>illegal import</kwd>
<kwd>food safety</kwd>
<kwd>EU</kwd>
</kwd-group>
<contract-num rid="cn001">PROMISE project (project n. 265877)</contract-num>
<contract-num rid="cn002">AGL2016-74882-C3-3</contract-num>
<contract-sponsor id="cn001">Seventh Framework Programme<named-content content-type="fundref-id">10.13039/100011102</named-content></contract-sponsor>
<contract-sponsor id="cn002">Ministerio de Econom&#x00ED;a y Competitividad<named-content content-type="fundref-id">10.13039/501100003329</named-content></contract-sponsor>
<counts>
<fig-count count="5"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="56"/>
<page-count count="10"/>
<word-count count="0"/>
</counts>
</article-meta>
</front>
<body>
<sec><title>Introduction</title>
<p><italic>Staphylococcus aureus</italic> is a well-known opportunistic foodborne pathogen, and is involved in numerous nosocomial and community-associated (CA) outbreaks worldwide (<xref ref-type="bibr" rid="B39">Paterson et al., 2014</xref>). The widespread use of antibiotics, and particularly inappropriate use or overuse, has facilitated the emergence of pathogens resistant to antibiotics, such as methicillin-resistant <italic>S. aureus</italic> (MRSA). In addition to human clinical applications, antibiotics are also used in veterinary medicine and animal feeding, contributing to the substantial appearance of antibiotic-resistant strains (<xref ref-type="bibr" rid="B49">Valsangiacomo et al., 2000</xref>; <xref ref-type="bibr" rid="B17">Grema et al., 2015</xref>). The first reported nosocomial episode involving MRSA was in 1960, and MRSA has become an emergent pathogen (<xref ref-type="bibr" rid="B8">Bonten and Weinstein, 2016</xref>; <xref ref-type="bibr" rid="B36">Oniciuc et al., 2017</xref>), affecting patients in hospitals and people in community settings such as nursing homes and nurseries (<xref ref-type="bibr" rid="B27">Lo et al., 2007</xref>; <xref ref-type="bibr" rid="B32">Murphy et al., 2012</xref>; <xref ref-type="bibr" rid="B7">Blumental et al., 2013</xref>). MRSA has been found in livestock, linked to a jump from humans to animals (<xref ref-type="bibr" rid="B52">Voss et al., 2005</xref>; <xref ref-type="bibr" rid="B41">Price et al., 2012</xref>). The prevalence of livestock-associated (LA)-MRSA in farm animals is increasing and the resulting food products may become contaminated. This may be an important ecological niche, favoring the evolution of LA-MRSA (<xref ref-type="bibr" rid="B56">Yan et al., 2014</xref>; <xref ref-type="bibr" rid="B50">Verhegghe et al., 2016</xref>), and the apparently increasing prevalence can lead to human outbreaks (<xref ref-type="bibr" rid="B18">Gr&#x00F8;ntvedt et al., 2016</xref>).</p>
<p>Lineages other than LA-MRSA are found in food intended for human consumption. Contaminated food of animal origin may contribute to the prevalence of CA-MRSA (<xref ref-type="bibr" rid="B34">Ogata et al., 2012</xref>; <xref ref-type="bibr" rid="B44">Rodr&#x00ED;guez-L&#x00E1;zaro et al., 2015</xref>) or hospital-acquired (HA)-MRSA (<xref ref-type="bibr" rid="B42">Pu et al., 2009</xref>; <xref ref-type="bibr" rid="B54">Weese et al., 2010</xref>). We demonstrated the presence of CA-MRSA in foods confiscated from passengers on international flights, mostly from Central and South America (<xref ref-type="bibr" rid="B44">Rodr&#x00ED;guez-L&#x00E1;zaro et al., 2015</xref>). This has food safety implications: contamination with the CA-MRSA lineages isolated may have been due to incorrect food handling, and not zoonotic transmission.</p>
<p>Staphylococcal enterotoxins (SEs, <italic>se</italic> genes) have been detected in many foodstuff causing staphylococcal food poisoning, toxic shock, and allergic and autoimmune reactions (<xref ref-type="bibr" rid="B16">Gonano et al., 2009</xref>). Staphylococcal enterotoxins are classified into 23 different SEs and SE-like toxins (SELs) including the five major serological types SEA, SEB, SEC, SED, and SEE (<xref ref-type="bibr" rid="B20">Hennekinne et al., 2012</xref>; <xref ref-type="bibr" rid="B9">Carfora et al., 2015</xref>; <xref ref-type="bibr" rid="B37">Ono et al., 2015</xref>). However, little is known about the prevalence of MRSA in foods involved in international trade, or about their enterotoxin production. The role, if any, of foods illegally transported between different parts of the globe in MRSA epidemiology is unknown. We investigated whether the uncontrolled entry of foods into Europe through international flight passengers or from open markets at European Union (EU) borders is a potential route of transmission of enterotoxigenic antibiotic-resistant strains, particularly MRSA. Our study reveals the entry of MRSA by this route, and that the lineages involved showed enterotoxigenicity. Uncontrolled entry of foodstuffs into the EU can be a relevant neglected route of MRSA dissemination.</p>
</sec>
<sec id="s1" sec-type="materials|methods">
<title>Materials and Methods</title>
<sec><title>Food Sample Collection</title>
<p>This study was part of the EU-funded project PROMISE<sup><xref ref-type="fn" rid="fn01">1</xref></sup> &#x201C;<italic>Protection of consumers by microbial risk mitigation through combating segregation of expertise.</italic>&#x201D; One of the PROMISE&#x2019;s goals was to evaluate neglected risks for transmission of foodborne pathogens through exogenous routes of transmission (i.e., from non-UE countries) evaluating several UE international airports and borders (<xref ref-type="bibr" rid="B53">Wagner et al., 2015</xref>). A total of 868 animal-derived food items collected from August 2012 to July 2015 were tested for the presence of <italic>S. aureus</italic> and MRSA. The foods were confiscated from the luggage of passengers on flights from non-EU countries by the Border Authorities at Bilbao International Airport (Spain) (263 food products) and Vienna International Airport (Austria) (595 food products), or were collected from foods illegally introduced and sold in an open market closed to an EU border (the southeast part of Romania, on the border with Republic of Moldavia; Giurgiule&#x015F;ti- Gala&#x0163;i) (10 food products). Open markets at the Romanian borders are authorized to sell fresh vegetables, but not food of animal origin. Crossing the Romanian EU border with food is allowed just for low amounts of foods on distances that do not overpass 50 km (Romanian law 10/2010), but very often these foods are illegally sold in those open markets.</p>
<p>Food samples included 408 (47%) meat samples of diverse origin (including antelope, beef, chicken, duck, guinea pig, pork, rodents, and turkey), 447 (51.5%) milk and dairy products, 7 eggs (0.8%), and 6 fish and fish products (0.7%). The geographical origin of the food samples collected at the airports was wide: Africa (C&#x00F4;te d&#x2019;Ivoire, Egypt, Ethiopia, Niger, South Africa, and Tunisia), America (Argentina, Bolivia, Brazil, Colombia, Cuba, Dominican Republic, Ecuador, Honduras, Mexico, Nicaragua, Panama, Paraguay, and Peru), Asia (Azerbaijan, China, India, Iran, Israel, Jordan, Kazakhstan, North Korea, Mongolia, Philippines, Qatar, South Korea, Thailand, Turkey, United Arab Emirates, and Vietnam), and non-EU Europe (Albania, Armenia, Bosnia and Herzegovina, Republic of Kosovo, Former Republic of Macedonia, Moldova, Republic of Serbia, Montenegro, Russia, and Ukraine).</p>
</sec>
<sec><title>Detection and Isolation of <italic>S. aureus</italic></title>
<p><italic>Staphylococcus aureus</italic> was counted by the ISO 6888-2 method (<xref ref-type="bibr" rid="B22">ISO, 1999</xref>). Real-time PCR was used to confirm <italic>S. aureus</italic> isolates as previously described (<xref ref-type="bibr" rid="B48">Trn&#x010D;&#x00ED;kov&#x00E1; et al., 2008</xref>). Positive colonies with the correct morphology on Baird Parker agar plates were taken for further typing tests (MRSA biotype, antibiotic resistance, and genetic characterization).</p>
</sec>
<sec><title>Screening for the Presence of MRSA</title>
<p><italic>Staphylococcus aureus</italic> isolates were tested for <italic>mec</italic>A and <italic>mec</italic>C by multiplex PCR as previously described (<xref ref-type="bibr" rid="B46">Stegger et al., 2012</xref>).</p>
</sec>
<sec><title>Antibiotic Susceptibility Testing</title>
<p>Susceptibility to antimicrobials was determined by a microdilution method, applying the recommendations and minimum inhibitory concentration (MIC) breakpoints of the European Committee on Antimicrobial Susceptibility Testing (EUCAST) guidelines 2015 (<xref ref-type="bibr" rid="B15">EUCAST, 2015</xref>). Susceptibility to 20 antimicrobial agents was tested: penicillin (PEN), oxacillin (OXA), amoxicillin/clavulanate (AMC), daptomycin (DAP), erythromycin (ERY), clindamycin (CLI), teicoplanin (TEC), vancomycin (VAN), ciprofloxacin (CIP), levofloxacin (LVX), amikacin (AMK), gentamicin (GEN), tobramycin (TOB), mupirocin (MUP), rifampicin (RIF), tetracycline (TET), fusidic acid (FUS), fosfomycin (FOF), linezolid (LZD) and trimethoprim sulfamethoxazole (SXT).</p>
</sec>
<sec><title>Characterization of the Genetic Background</title>
<p>All MRSA isolates were subjected to Pulsed Field Gel Electrophoresis (PFGE) (<xref ref-type="bibr" rid="B29">McDougal et al., 2003</xref>), Multi Locus Sequence Typing (MLST) (<xref ref-type="bibr" rid="B14">Enright et al., 2000</xref>) and typing and subtyping of the SCCmec (staphylococcal cassette chromosome <italic>mec</italic>) element (<xref ref-type="bibr" rid="B25">Kondo et al., 2007</xref>; <xref ref-type="bibr" rid="B31">Milheiri&#x00E7;o et al., 2007</xref>). PFGE patterns were analyzed with Bionumerics software v6.6 (Applied-Maths NV, Sint-Martens-Latem, Belgium), and dendrograms were constructed using the Dice similarity coefficient and the unweighted pair group mathematical average (UPGMA) clustering algorithm with 1% tolerance and optimization values. The allelic profiles obtained by MLST were assigned by comparison with the <italic>S. aureus</italic> MLST database hosted at <xref ref-type="bibr" rid="B45">Saureus.mlst.net (2016)</xref>. Information about MRSA strains was submitted to that database. Bionumerics software v6.6 was used for allelic profile-based comparisons applying a minimum spanning tree (MST) to define the relationships among MRSA strains at the micro evolutionary level. A sequence type (ST) number was attributed to each distinct combination of alleles at the seven genes (<xref ref-type="bibr" rid="B43">Ragon et al., 2008</xref>).</p>
</sec>
<sec><title>Detection of Panton-Valentine Leukocidin Virulence Factors</title>
<p>All MRSA strains were tested for the PVL genes (<italic>lukS</italic>-PV and <italic>lukF</italic>-PV) by conventional PCR as described (<xref ref-type="bibr" rid="B26">Lina et al., 1999</xref>). Reference strain ATCC 49775 was used as a positive control.</p>
</sec>
<sec><title>Enterotoxin Profiling</title>
<p>Methicillin-resistant <italic>S. aureus</italic> isolates were tested by a multiplex PCR targeting <italic>sea, seb, sec, sed, see, seg, seh, sei, sej</italic> genes as described by <xref ref-type="bibr" rid="B16">Gonano et al. (2009)</xref>.</p>
</sec>
</sec>
<sec><title>Results</title>
<sec><title>MRSA in Food Samples Confiscated by Border Authorities</title>
<p>Microbiological tests revealed <italic>S. aureus</italic> in 15.7% of confiscated food items and MRSA in 3.0% (26/868) (<bold>Figures <xref ref-type="fig" rid="F1">1</xref>, <xref ref-type="fig" rid="F2">2</xref></bold>). The highest prevalence of <italic>S. aureus</italic> we observed was 64.6% in dairy samples confiscated at Bilbao Airport, and the highest value for MRSA-positive samples was 11.8% (<bold>Figure <xref ref-type="fig" rid="F2">2</xref></bold>). The mean <italic>S. aureus</italic> count overall was 2.9 &#x00D7; 10<sup>6</sup> CFU/g, with a minimum value of 1.0 &#x00D7; 10<sup>1</sup> CFU/g in raw pork meat confiscated at Bilbao Airport from a passenger flying from Moscow, and a maximum value of 2.45 &#x00D7; 10<sup>8</sup> CFU/g in cheese confiscated at Vienna Airport from a passenger flying from Turkey (<bold>Figure <xref ref-type="fig" rid="F3">3</xref></bold>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption><p>Heat mapof the origin and distribution of <italic>Staphylococcus aureus</italic>-positive food samples.</p></caption>
<graphic xlink:href="fmicb-08-01344-g001.tif"/>
</fig>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption><p>Prevalence (%) of <italic>S. aureus</italic> in food samples. Columns with stripes represent <italic>S. aureus</italic>-positive isolates and solid columns represent methicillin-resistant <italic>S. aureus</italic> (MRSA)-positive samples.</p></caption>
<graphic xlink:href="fmicb-08-01344-g002.tif"/>
</fig>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption><p><italic>Staphylococcus aureus</italic> counts (log<sub>10</sub>CFU/g) <italic>per</italic> food category, type and origin. The number of food samples analyzed <italic>per</italic> food type are displayed above each column. Lines passing through the columns represent: (- -) the maximum (M) acceptable value in the microbiological criteria for raw milk intended for processing and in powdered milk; and ( &#x2013; ) the M acceptable value for cheeses made from raw milk, according to <xref ref-type="bibr" rid="B1">Anonymous (2005)</xref>. The International Commission on Microbiological Specifications for Foods (ICMSF) recommends an M acceptable value of 10<sup>3</sup> CFU/g for cooked meat and poultry products (<xref ref-type="bibr" rid="B21">ICMSF, 2011</xref>).</p></caption>
<graphic xlink:href="fmicb-08-01344-g003.tif"/>
</fig>
<p>The MRSA strains were isolated from 21 milk and dairy products (cow, sheep or goat milk and cheese, either fresh, brined or with spices), and five meat and meat products (raw and cooked meat). The MRSA-positive foods confiscated at Bilbao Airport were from flights from Nigeria (1), Egypt (2), Republic of Honduras (1), China (1), Nicaragua (5), Bolivia (4), Ecuador (1), Peru (2), Columbia (1), and Republic of Serbia (1). Those at Vienna Airport, were from flights from Egypt (3) and Turkey (2). Two MRSA-positive food samples were from the Republic of Moldova and were confiscated at the Romanian border.</p>
</sec>
<sec><title>Antibiotic Profile of the MRSA Isolates</title>
<p>Antibiotic susceptibility testing identified 14 resistance profiles (<bold>Table <xref ref-type="table" rid="T1">1</xref></bold>). Sixteen of the 49 MRSA strains were multiresistant.</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>Antibiotic resistance profiles of methicillin-resistant <italic>S. aureus</italic> (MRSA) strains isolated from food confiscated from passengers of non-EU-flights or at a land border, 2012&#x2013;2015.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">Resistance profile</th>
<th valign="top" align="left">Antibiotics<sup>a</sup></th>
<th valign="top" align="center">Number of strains</th>
<th valign="top" align="center">Percentage (%)</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">RP0</td>
<td valign="top" align="left">&#x03B2;-lactams</td>
<td valign="top" align="center">6</td>
<td valign="top" align="center">22.2</td>
</tr>
<tr>
<td valign="top" align="left">RP1</td>
<td valign="top" align="left">PEN, TET, ERY</td>
<td valign="top" align="center">5</td>
<td valign="top" align="center">18.5</td>
</tr>
<tr>
<td valign="top" align="left">RP2</td>
<td valign="top" align="left">PEN, ERY</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">11.1</td>
</tr>
<tr>
<td valign="top" align="left">RP3</td>
<td valign="top" align="left">PEN, FUS, TET, TOB, GEN</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">7.4</td>
</tr>
<tr>
<td valign="top" align="left">RP4</td>
<td valign="top" align="left">PEN, TET, TOB</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">7.4</td>
</tr>
<tr>
<td valign="top" align="left">RP5</td>
<td valign="top" align="left">PEN, TET, SXT</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">3.7</td>
</tr>
<tr>
<td valign="top" align="left">RP6</td>
<td valign="top" align="left">PEN, TET, FUS</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">3.7</td>
</tr>
<tr>
<td valign="top" align="left">RP7</td>
<td valign="top" align="left">PEN, FOF</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">3.7</td>
</tr>
<tr>
<td valign="top" align="left">RP8</td>
<td valign="top" align="left">PEN, LVX</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">3.7</td>
</tr>
<tr>
<td valign="top" align="left">RP9</td>
<td valign="top" align="left">PEN, LVX, SXT</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">3.7</td>
</tr>
<tr>
<td valign="top" align="left">RP10</td>
<td valign="top" align="left">PEN, LVX, FOF, RIF</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">3.7</td>
</tr>
<tr>
<td valign="top" align="left">RP11</td>
<td valign="top" align="left">PEN, TET, ERY, CLI</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">3.7</td>
</tr>
<tr>
<td valign="top" align="left">RP12</td>
<td valign="top" align="left">[PEN]<sup>b</sup>, TET, ERY, [OXA]<sup>b</sup></td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">3.7</td>
</tr>
<tr>
<td valign="top" align="left">RP13</td>
<td valign="top" align="left">PEN, TET, CIP, LVX, ERY, CLI</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">3.7</td></tr>
</tbody></table>
<table-wrap-foot>
<attrib><italic>PEN, penicillin; FOF, fosfomycin; TET, tetracycline; SXT, trimethoprim sulfamethoxazole; FUS, fusidic acid; ERY, erythromycin; LVX, levofloxacin; TOB, tobramycin; RIF, rifampicin; GEN, gentamicin; CLI, clindamycin; CIP, ciprofloxacin; MUP, mupirocin. <sup>a</sup>The minimum inhibitory concentration (MIC) break points used were those in the <xref ref-type="bibr" rid="B15">EUCAST (2015)</xref> guidelines. <sup>b</sup>Parentheses indicates susceptibility.</italic></attrib>
</table-wrap-foot>
</table-wrap>
</sec>
<sec><title>Genetic Characterization of MRSA Isolates</title>
<p>All the MRSA isolates harbored the <italic>mec</italic>A gene and none harbored the <italic>mec</italic>C gene. More than 75% of the isolates were SCC<italic>mec</italic> type IV: 48.9% were IVc and IVe, 22.4% IVa, and 4.1% IVh, and 24.5% were SCC<italic>mec</italic> type V. SCC<italic>mec</italic> typing of three isolates was not possible: the multiplex PCR-2, which types the <italic>mec</italic>A complex class, amplified a 804 bp DNA fragment, consistent with type C, but the multiplex PCR-1 targeting the <italic>ccr</italic> gene complex did not give an amplification product. Similarly, for another isolate the multiplex PCR-1 amplified a 937 bp DNA fragment consistent with <italic>ccr</italic> type 2 (A2B2), but the multiplex PCR-2 did not give an amplification product. In addition, six isolates tested positive for <italic>luk</italic>-PVL genes (all of them were SCC<italic>mec</italic> IV subtypes IVc and IVe).</p>
<p>Most of the MRSA isolates were positive for the enterotoxin genes A, B, C, D, G, H, I, J, but none were positive for enterotoxin E. Nineteen of the 26 MRSA strains (73%) tested positive for one or more <italic>se</italic> genes (<bold>Table <xref ref-type="table" rid="T2">2</xref></bold>); four strains (15.4%) harbored only one kind of <italic>se</italic> gene, and 15 strains (57.6%) more than one type of <italic>se</italic> gene (six strains carried <italic>seg/sei</italic> genes). None of the MRSA isolates positive for <italic>luk</italic>-PVL genes were enterotoxigenic.</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p>Enterotoxin profiles of MRSA strains.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">Type of <italic>se</italic> gene</th>
<th valign="top" align="center">Milk and dairy products</th>
<th valign="top" align="center">Meat and meat products</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><italic>se</italic>-negative</td>
<td valign="top" align="center">5 (19.2)<sup>a</sup></td>
<td valign="top" align="center">2 (7.7)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>se</italic>-positive</td>
<td valign="top" align="center">16 (61.6)</td>
<td valign="top" align="center">3 (11.5)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>sea</italic></td>
<td valign="top" align="center">1 (3.85)</td>
<td valign="top" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="top" align="left"><italic>seg</italic></td>
<td valign="top" align="center">1 (3.85)</td>
<td valign="top" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="top" align="left"><italic>seh</italic></td>
<td valign="top" align="center">2 (7.7)</td>
<td valign="top" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="top" align="left"><italic>sea/seb</italic></td>
<td valign="top" align="center">3 (11.5)</td>
<td valign="top" align="center">1 (3.8)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>sea/seh</italic></td>
<td valign="top" align="center">1 (3.85)</td>
<td valign="top" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="top" align="left"><italic>seg/sei</italic></td>
<td valign="top" align="center">4 (15.4)</td>
<td valign="top" align="center">2 (7.7)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>sec/seg/sei</italic></td>
<td valign="top" align="center">1 (3.85)</td>
<td valign="top" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="top" align="left"><italic>sed/seg/sej</italic></td>
<td valign="top" align="center">1 (3.85)</td>
<td valign="top" align="center">&#x2013;</td>
</tr>
<tr>
<td valign="top" align="left"><italic>sed/seg/sei/sej</italic></td>
<td valign="top" align="center">2 (7.7)</td>
<td valign="top" align="center">&#x2013;</td></tr>
</tbody></table>
<table-wrap-foot>
<attrib><italic><sup>a</sup>Number and percentages in parenthesis of MRSA strains positive for enterotoxin-producing genes.</italic></attrib>
</table-wrap-foot>
</table-wrap>
<p>Pulsed Field Gel Electrophoresis patterns and ST types were determined. <italic>Sma</italic>I-PFGE provided a fingerprint pattern consisting of 13&#x2013;17 DNA fragments of 20&#x2013;670 Kbp, approximately (<bold>Figure <xref ref-type="fig" rid="F4">4</xref></bold>). Two isolates were not typeable by <italic>Sma</italic>I-PFGE suggesting they may be ST398, a lineage with an unusual resistance to digestion by <italic>Sma</italic>I (<xref ref-type="bibr" rid="B11">Chung et al., 2000</xref>). MLST identified nine ST, with eight MRSA strains (30.8%) being ST5. These eight ST5 isolates were of related genotypes: three showed the same fingerprint pattern, harboring SCC<italic>mec</italic> type V, and five, SCC<italic>mec</italic> type IV. The eight strains were isolated from food samples not confiscated on the same date, or at the same airport; they were cheese (<italic>n</italic> = 7) from Nicaragua, Columbia, Egypt, and Turkey and fresh beef meat (<italic>n</italic> = 1) from Egypt.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption><p>Genetic relationships among the <italic>Sma</italic>I Pulsed Field Gel Electrophoresis (PFGE) profiles of the 26 MRSA isolates. MRSA isolates were obtained from the 136 for <italic>S. aureus</italic>-positive food samples, confiscated from people traveling into the European Union (EU), from August 2012 to July 2015. The dendrogram was generated from Dice similarity coefficients with the unweighted pair group mathematical average (UPGMA) clustering algorithm with 1% in the tolerance and optimization values. The scale indicates similarity values.</p></caption>
<graphic xlink:href="fmicb-08-01344-g004.tif"/>
</fig>
<p>The other MRSA strains were ST1649, ST8, ST1, ST22, ST72, ST97, and ST398 (<bold>Figure <xref ref-type="fig" rid="F5">5</xref></bold>). ST1649 (15.4%) and ST8 (15.4%) were the most prevalent (15.4% each), and the three ST8 carried PVL genes. ST1, ST22, ST72, and ST97 were found in different hard and semi-hard cheeses. ST398 is a livestock clone and was found in fresh meat confiscated from a passenger traveling from the Republic of Serbia to Bilbao Airport.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption><p>Multi Locus Sequence Typing (MLST) of 26 MRSA strains isolated from food illegally imported into the EU. The isolated were clustered according to seven housekeeping genes using a minimum spanning tree (MST). A different randomized color was attributed to each sequence type (ST). MRSA strains belonging to the same ST are displayed surrounded by dotted boxes. Information referring to sample type/country of origin/confiscation point/date of confiscation: DD.MM.YYYY/resistance profile is given in brackets for each MRSA strain, following the strain code. Abbreviations used: AT, Austria; ES, Spain; RO, Romania.</p></caption>
<graphic xlink:href="fmicb-08-01344-g005.tif"/>
</fig>
<p>An oxacillin-susceptible <italic>mec</italic>A-positive <italic>S. aureus</italic> (OS-MRSA) strain was isolated from cheese confiscated from a passenger flying from Turkey. To our knowledge, this is the first time that an OS-MRSA has been isolated from processed food, and the first time that an OS-MRSA has been isolated from food in Europe. This might indicate that OS-MRSA may be circulating in Europe and may enter the EU via the illegal import of food.</p>
</sec>
</sec>
<sec><title>Discussion</title>
<p>We document <italic>S. aureus</italic> and MRSA in food confiscated to international flight travelers in UE airports or illegally sold foods in open markets at EU borders. Approximately one in six of the foods tested (136 of 868; 15.7%) were positive for <italic>S. aureus</italic>, and 3.0 % were positive for MRSA (26 of 868). The confiscated foods in which <italic>S. aureus</italic> counts exceeded international microbiological recommendations and EU regulations (<xref ref-type="bibr" rid="B1">Anonymous, 2005</xref>) were of very diverse geographical origins, including South and Central America, Europe, Africa, and Asia (<bold>Figures <xref ref-type="fig" rid="F1">1</xref>, <xref ref-type="fig" rid="F2">2</xref></bold>). This is a serious public health concern because <italic>S. aureus</italic> can produce enterotoxins that can be present in food products. Our results agree with previous reports of the prevalence of <italic>S. aureus</italic> contamination (13&#x2013;60%) of food products of animal origin (<xref ref-type="bibr" rid="B13">Crago et al., 2012</xref>; <xref ref-type="bibr" rid="B44">Rodr&#x00ED;guez-L&#x00E1;zaro et al., 2015</xref>; <xref ref-type="bibr" rid="B47">Sun et al., 2015</xref>; <xref ref-type="bibr" rid="B12">Ciolacu et al., 2016</xref>). Various confiscated cheeses, including soft, semi hard, or hard had counts of up to 3.17 log<sub>10</sub> above the limit established by <xref ref-type="bibr" rid="B1">Anonymous (2005)</xref>. The high <italic>S. aureus</italic> counts may be in part the consequence of improper storage and poor hygiene according to the nature of surfaces and number of people handling the food (<xref ref-type="bibr" rid="B10">Chen et al., 2001</xref>). There may also be two way bacterial transfer between clothes and food preparation surfaces (<xref ref-type="bibr" rid="B6">Bloomfield et al., 2011</xref>). Twenty-six of the <italic>S. aureus</italic> strains isolated were MRSA (3.0%) of which 19 were enterotoxigenic. Under inappropriate food transportation conditions, heat-stable enterotoxins could emerge leading to gastroenteritis outbreaks. Many of the MRSA strains were positive for one or more <italic>se</italic> genes, consistent with previous studies (<xref ref-type="bibr" rid="B40">Pereira et al., 2009</xref>; <xref ref-type="bibr" rid="B9">Carfora et al., 2015</xref>). Contaminated milk and dairy products are major vectors of enterotoxins but, the link between the source of food contamination and transfer of antibiotic resistance determinants remains unclear; there are few reports describing the presence and possible origin of MRSA in foods (<xref ref-type="bibr" rid="B38">Ortega et al., 2010</xref>). However, there has been one case of community-acquired foodborne illness caused by SEC-producing MRSA (<xref ref-type="bibr" rid="B23">Jones et al., 2002</xref>) in the United States, and production of SE types SEB, SEC, SED, and SEE in two MRSA strains of milk origin from Minnesota farms (<xref ref-type="bibr" rid="B19">Haran et al., 2012</xref>).</p>
<p>Little is known about the prevalence of MRSA in food (<xref ref-type="bibr" rid="B36">Oniciuc et al., 2017</xref>), and particularly on in foods entering the EU. Our research group has performed several studies in airports and at borders (<xref ref-type="bibr" rid="B35">Oniciuc et al., 2015</xref>; <xref ref-type="bibr" rid="B44">Rodr&#x00ED;guez-L&#x00E1;zaro et al., 2015</xref>) and found <italic>S. aureus</italic> and MRSA prevalence values of 8&#x2013;33.9% and 0.5&#x2013;3.1%, respectively. The values we report here are similar: 15.7 and 3.0% for <italic>S. aureus</italic> and MRSA, respectively. The number, the type of food sample, the geographical origin and the sampling place (Vienna International Airport was included in this study) are larger than in previous studies, but no significant differences in the overall percentages were observed. Nevertheless, 19 of 263 food items (7.2%) were MRSA positive at Bilbao Airport but only 7 of 595 (0.8%) at Vienna Airport. This significant difference could be a consequence of the geographical origins of the flights: most of the MRSA-positive foods at the Bilbao Airport were from Central and South America (14 of 19; 73.7%).</p>
<p>The MRSA lineages found included ST5, ST8, ST1649, ST1 and other lineages represented in a lesser extent (ST7, ST22, ST72, ST97, and ST398) (<bold>Figure <xref ref-type="fig" rid="F5">5</xref></bold>). The ST most frequently isolated was ST5 (30.8%). This ST is believed to be the result of a species jump followed by adaption to the new host (<xref ref-type="bibr" rid="B28">Lowder et al., 2009</xref>). ST5 has mostly been found among poultry isolates (<xref ref-type="bibr" rid="B28">Lowder et al., 2009</xref>), but in our study was mostly isolated from dairy products. The ST5 lineage is a major component of hospital- and community-associated MRSA and MSSA worldwide (<xref ref-type="bibr" rid="B30">Miko et al., 2013</xref>). Other MRSA strains identified in our study were ST8-MRSA-IV/V and ST1649-MRSA-IV, which are successful of CA-MRSA clones. The presence of PVL genes and different antimicrobial susceptibility patterns in ST8-MRSA are causes of concern; it is not clear whether human handlers played any role in the preliminary post slaughter process.</p>
<p>The LA-MRSA ST398 is widespread in Europe (<xref ref-type="bibr" rid="B36">Oniciuc et al., 2017</xref>). It emerged rapidly in the Netherlands and now accounts for 20% of all human MRSA cases and for 42% of newly detected MRSA, indicating that animals are important reservoirs for human MRSA infection (<xref ref-type="bibr" rid="B24">Kadariya et al., 2014</xref>). There have already been outbreaks due to LA-MRSA ST398 (<xref ref-type="bibr" rid="B55">Wulf et al., 2008</xref>; <xref ref-type="bibr" rid="B51">Verkade et al., 2012</xref>). However, LA-MRSA ST398 was found only in one dairy product from Egypt in our study; this isolate harbors the <italic>luk</italic>-PVL genes but not enterotoxin-producing genes, in accordance with previous studies (<xref ref-type="bibr" rid="B4">Argud&#x00ED;n et al., 2011</xref>). We isolated one OS-MRSA strain from a cheese from Turkey at Vienna airport: this MRSA variant is important because it may be misidentified as MSSA (<xref ref-type="bibr" rid="B5">Ariza-Miguel et al., 2015</xref>), such that &#x03B2;-lactam antibiotics may be used for treatment resulting in the potential development of highly resistant MRSA.</p>
<p>Many of our MRSA isolates were resistant to three or more antimicrobial agents (<bold>Table <xref ref-type="table" rid="T1">1</xref></bold>). This relatively high prevalence of these strains and their antimicrobial resistance profiles reveals the potential public health problems associated with illegal import of food in passenger luggage. Multiresistant strains are being distributed worldwide by air travel, and indeed undoubtedly by the various other forms travel across borders. United States custom officers ask all passengers from outside the United States to fill a form about contact with animals (Category A referring to zoonotic disease transmissible through animal contact) and any animal-origin food product potentially infected with zoonotic agents (Category B) (<xref ref-type="bibr" rid="B33">Noordhuizen et al., 2013</xref>). The EU forbids the importation of personal foodstuff of animal origin including meat, milk, and derived foodstuffs, from non-EU-countries (other than the Faeroe Islands, Greenland, and Iceland) (<xref ref-type="bibr" rid="B3">Anonymous, 2009</xref>). The EU has issued several regulations for the import of animals and food products of animal origin, but these regulations generally refer to commercial trade and bulk food products (<xref ref-type="bibr" rid="B2">Anonymous, 2007</xref>, <xref ref-type="bibr" rid="B3">2009</xref>). This disregard of the risk associated with illegally transported foodstuffs combined with insufficient border controls could lead to foodborne outbreaks (<xref ref-type="bibr" rid="B33">Noordhuizen et al., 2013</xref>). The prevalence of MRSA in food depends on, among other factors, origin and country of provenance (<xref ref-type="bibr" rid="B44">Rodr&#x00ED;guez-L&#x00E1;zaro et al., 2015</xref>; <xref ref-type="bibr" rid="B35">Oniciuc et al., 2015</xref>). Foodborne outbreaks of MRSA infection have been reported (<xref ref-type="bibr" rid="B23">Jones et al., 2002</xref>), confirming that food serves as a transmission pathway for MRSA (<xref ref-type="bibr" rid="B36">Oniciuc et al., 2017</xref>).</p>
</sec>
<sec><title>Conclusion</title>
<p>This study shows the presence of enterotoxigenic HA-, CA-, and LA-MRSA in foods confiscated from passengers on flights entering the EU and in food illegally introduced and sold at EU borders. There is therefore a risk of foodborne transmission of MRSA, and illegal entry of food is a possible route for enterotoxigenic MRSA transmission and spread. Efficient control measures (such as the increase of the <italic>in situ</italic> examination and testing for the presence of uncontrolled entry of foods at EU borders) are required to avoid transmission of antimicrobial-resistant strains to humans by the consumption of such foods. Travelers should be made aware of the dangers, to promote acceptation of prohibition of food transport and thereby reduce the risk of spreading of foodborne pathogens.</p>
</sec>
<sec><title>Author Contributions</title>
<p>DR-L designed, supervised the experiments, analyzed the results, revised the first draft, and prepare the last draft of the manuscript. E-AO performed part of the experiments, analyst the data and prepare the first draft of the manuscript. PG, IF-N, DG, and MD-G performed part of the experiments. JE-B performed part of the experiments and revised the different version of the manuscript. MW and AIN collaborated in the design of the experiment and revised the different version of the manuscript. MH collaborated in the design of the experiment, in the supervision of the experiments, and in the analysis of the results and revised the different versions of the manuscript.</p>
</sec>
<sec><title>Conflict of Interest Statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</body>
<back>
<ack>
<p>This work was supported by the 7th EU Framework Programme PROMISE project (project n. 265877) and the Project AGL2016-74882-C3-3 of the Ministry of Economy and Competitiveness, Government of Spain. E-AO was the beneficiary of COST Action FA1202 (STSM-FA1202-011015-063402) and FEMS (FEMS-RG-2015-0053) grants. We thank Dr. Jaime Ariza-Miguel for technical assistance.</p>
</ack>
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