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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Neuroanat.</journal-id>
<journal-title>Frontiers in Neuroanatomy</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Neuroanat.</abbrev-journal-title>
<issn pub-type="epub">1662-5129</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fnana.2014.00059</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Neuroscience</subject>
<subj-group>
<subject>Original Research Article</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Combinatorial expression of <italic>Lef1, Lhx2, Lhx5, Lhx9, Lmo3, Lmo4</italic>, and <italic>Prox1</italic> helps to identify comparable subdivisions in the developing hippocampal formation of mouse and chicken</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Abell&#x000E1;n</surname> <given-names>Antonio</given-names></name>
</contrib>
<contrib contrib-type="author">
<name><surname>Desfilis</surname> <given-names>Ester</given-names></name>
<uri xlink:href="http://community.frontiersin.org/people/u/168789"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Medina</surname> <given-names>Loreta</given-names></name>
<xref ref-type="author-notes" rid="fn001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://community.frontiersin.org/people/u/180"/>
</contrib>
</contrib-group>
<aff><institution>Laboratory of Brain Development and Evolution, Department of Experimental Medicine, Institute of Biomedical Research of Lleida, University of Lleida</institution> <country>Lleida, Spain</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Agust&#x000ED;n Gonz&#x000E1;lez, Universida Complutense de Madrid, Spain</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Christoph Redies, University of Jena School of Medicine, Germany; Andras Csillag, Semmelweis University, Hungary</p></fn>
<fn fn-type="corresp" id="fn001"><p>&#x0002A;Correspondence: Loreta Medina, Laboratory of Brain Development and Evolution, Facultat de Medicina, Universitat de Lleida, Edifici Biomedicina I - IRBLleida, Avda. Alcalde Rovira Roure 80, Lleida 25198, Spain e-mail: <email>loreta.medina&#x00040;mex.udl.cat</email></p></fn>
<fn fn-type="other" id="fn002"><p>This article was submitted to the journal Frontiers in Neuroanatomy.</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>04</day>
<month>07</month>
<year>2014</year>
</pub-date>
<pub-date pub-type="collection">
<year>2014</year>
</pub-date>
<volume>8</volume>
<elocation-id>59</elocation-id>
<history>
<date date-type="received">
<day>20</day>
<month>04</month>
<year>2014</year>
</date>
<date date-type="accepted">
<day>12</day>
<month>06</month>
<year>2014</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2014 Abell&#x000E1;n, Desfilis and Medina.</copyright-statement>
<copyright-year>2014</copyright-year>
<license license-type="open-access" xlink:href="http://creativecommons.org/licenses/by/3.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract><p>We carried out a study of the expression patterns of seven developmental regulatory genes (<italic>Lef1, Lhx2, Lhx9, Lhx5, Lmo3, Lmo4</italic>, and <italic>Prox1</italic>), in combination with topological position, to identify the medial pallial derivatives, define its major subdivisions, and compare them between mouse and chicken. In both species, the medial pallium is defined as a pallial sector adjacent to the cortical hem and roof plate/choroid tela, showing moderate to strong ventricular zone expression of <italic>Lef1, Lhx2</italic>, and <italic>Lhx9</italic>, but not <italic>Lhx5</italic>. Based on this, the hippocampal formation (<italic>indusium griseum</italic>, dentate gyrus, Ammon&#x00027;s horn fields, and subiculum), the medial entorhinal cortex, and part of the amygdalo-hippocampal transition area of mouse appeared to derive from the medial pallium. In the chicken, based on the same position and gene expression profile, we propose that the hippocampus (including the V-shaped area), the parahippocampal area (including its caudolateral part), the entorhinal cortex, and the amygdalo-hippocampal transition area are medial pallial derivatives. Moreover, the combinatorial expression of <italic>Lef1, Prox1, Lmo4</italic>, and <italic>Lmo3</italic> allowed the identification of dentate gyrus/CA3-like, CA1/subicular-like, and medial entorhinal-like comparable sectors in mouse and chicken, and point to the existence of mostly conserved molecular networks involved in hippocampal complex development. Notably, while the mouse medial entorhinal cortex derives from the medial pallium (similarly to the hippocampal formation, both being involved in spatial navigation and spatial memory), the lateral entorhinal cortex (involved in processing non-spatial, contextual information) appears to derive from a distinct dorsolateral caudal pallial sector.</p></abstract>
<kwd-group>
<kwd>medial pallium</kwd>
<kwd>hippocampus</kwd>
<kwd>dentate gyrus</kwd>
<kwd>Ammon&#x00027;s horn fields</kwd>
<kwd>entorhinal cortex</kwd>
<kwd>dorsolateral caudal pallium</kwd>
<kwd>evolution</kwd>
</kwd-group>
<counts>
<fig-count count="12"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="131"/>
<page-count count="22"/>
<word-count count="15879"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="introduction" id="s1">
<title>Introduction</title>
<p>The hippocampal formation is a cortical structure of the telencephalic hemispheres that is essential for spatial navigation and memory formation (Bird and Burgess, <xref ref-type="bibr" rid="B22">2008</xref>). Interest in this region mainly comes from data in mammals showing that: (1) Damage to the hippocampal formation (as it occurs in Alzheimer&#x00027;s disease) produces a decline or have devastating effects in spatial navigation and memory (Bird and Burgess, <xref ref-type="bibr" rid="B22">2008</xref>; Lithfous et al., <xref ref-type="bibr" rid="B69">2013</xref>). (2) The hippocampal formation (in particular, the dentate gyrus) is one of the few brain regions showing adult neurogenesis (Alvarez-Buylla and Lim, <xref ref-type="bibr" rid="B10">2004</xref>; Gould, <xref ref-type="bibr" rid="B44">2007</xref>), which has been related to network plasticity, learning and memory formation, and the ability to adapt to novelty and complexity (Gould et al., <xref ref-type="bibr" rid="B45">1999</xref>; Leuner et al., <xref ref-type="bibr" rid="B66">2006</xref>; Kempermann, <xref ref-type="bibr" rid="B59">2008</xref>; Varela-Nallar and Inestrosa, <xref ref-type="bibr" rid="B120">2013</xref>; Vivar and van Praag, <xref ref-type="bibr" rid="B122">2013</xref>). (3) Dysfunction of the hippocampal formation and dysregulation of adult hippocampal neurogenesis are associated to several mental disorders and neurological diseases (Eisch et al., <xref ref-type="bibr" rid="B38">2008</xref>; DeCarolis and Eisch, <xref ref-type="bibr" rid="B35">2010</xref>; Jun et al., <xref ref-type="bibr" rid="B55">2012</xref>; Mendez-David et al., <xref ref-type="bibr" rid="B79">2013</xref>).</p>
<p>In mammals, the hippocampal formation (HF) comprises three cytoarchitectonically distinct subdivisions, which from lateral to medial are: the subiculum, the hippocampus proper (Ammon&#x00027;s horn fields or cornu ammonis, subdivided in CA1, CA2, and CA3 fields) and the dentate gyrus (reviewed in Witter and Amaral, <xref ref-type="bibr" rid="B127">2004</xref>; Witter, <xref ref-type="bibr" rid="B126">2012</xref>). It also includes a rostral continuation called <italic>indusium griseum</italic> (K&#x000FC;nzle, <xref ref-type="bibr" rid="B63">2004</xref>). Within the HF, each subdivision is unique regarding its histological, neurochemical and connectivity patterns (Witter and Amaral, <xref ref-type="bibr" rid="B127">2004</xref>; Witter, <xref ref-type="bibr" rid="B126">2012</xref>). The projections of the dentate gyrus and CA fields are mostly intrinsic and associational (within the ipsilateral and contralateral HF), while the subiculum (with a small contribution of CA1) is the major output hippocampal center, with projections to several cortical and subcortical regions, hypothalamus, and midline thalamus (Witter and Amaral, <xref ref-type="bibr" rid="B127">2004</xref>). The HF receives input from the medial septum, nucleus of the diagonal band, pallial amygdala, hypothalamus, midline thalamus, and several brainstem monoaminergic cell groups. Most importantly, the HF is reciprocally connected with the entorhinal cortex, which is part of the parahippocampal region (Witter and Amaral, <xref ref-type="bibr" rid="B127">2004</xref>). Due to the strong functional relationship between the HF and the parahippocampal region, both regions are often included as parts of the hippocampal functional complex, although they differ in other respects, such as position, cytoarchitecture, neurochemistry, and connections (Witter and Amaral, <xref ref-type="bibr" rid="B127">2004</xref>; Witter, <xref ref-type="bibr" rid="B126">2012</xref>). The entorhinal cortex is an essential actor for hippocampal functions, and is also extensively and reciprocally connected with the neocortex, pallial and subpallial-extended amygdala, and septum/diagonal band nuclei (Witter and Amaral, <xref ref-type="bibr" rid="B127">2004</xref>).</p>
<p>Classical studies described in detail the development of rat HF subdivisions from distinct progenitor sectors of the medial pallium (Altman and Bayer, <xref ref-type="bibr" rid="B7">1990a</xref>,<xref ref-type="bibr" rid="B8">b</xref>,<xref ref-type="bibr" rid="B9">c</xref>). More recently, the molecular control of HF development has started to be elucidated. Wnt and BMP signals from the cortical hem, roof plate and/or meninges are essential for HF development (Galceran et al., <xref ref-type="bibr" rid="B41">2000</xref>; Lee et al., <xref ref-type="bibr" rid="B65">2000</xref>; Machon et al., <xref ref-type="bibr" rid="B71">2007</xref>; Choe et al., <xref ref-type="bibr" rid="B31">2013</xref>), and these induce the expression in the medial pallium of several transcription factors important for different aspects of HF development, such as Lhx2 (Porter et al., <xref ref-type="bibr" rid="B92">1997</xref>; Bulchand et al., <xref ref-type="bibr" rid="B25">2001</xref>; Monuki et al., <xref ref-type="bibr" rid="B83">2001</xref>; Vyas et al., <xref ref-type="bibr" rid="B123">2003</xref>), Lef1 (lymphoid enhancer factor 1) and other TCF transcription factors (Galceran et al., <xref ref-type="bibr" rid="B41">2000</xref>; Choe et al., <xref ref-type="bibr" rid="B31">2013</xref>). In particular, Lef1 is crucial for the production of dentate gyrus granule cells, and Lef1 together with other TCFs are necessary for the development of the whole HF, which is not formed following subrogation of their function (Galceran et al., <xref ref-type="bibr" rid="B41">2000</xref>). Wnt and Lef1 induce the expression of another transcription factor specifically in the dentate gyrus, Prox1 (prospero-related homeobox 1 gene), which is involved in the differentiation of granule cells (Zhou et al., <xref ref-type="bibr" rid="B132">2004</xref>; Lavado et al., <xref ref-type="bibr" rid="B64">2010</xref>; Iwano et al., <xref ref-type="bibr" rid="B52">2012</xref>). Interestingly, some of the regulatory genes involved in the development of the HF, such as those encoding some molecules of the Wnt/&#x003B2; catenin pathway, some TCFs (mostly TCF4), and Prox1, continue to be expressed and are functional in the adult dentate gyrus (Shimogori et al., <xref ref-type="bibr" rid="B108">2004</xref>; Karalay et al., <xref ref-type="bibr" rid="B57">2011</xref>), and at least Wnt signaling and Prox1 play important roles in distinct aspects of adult neurogenesis, such as cell proliferation or the differentiation of new granule cells (Karalay et al., <xref ref-type="bibr" rid="B57">2011</xref>; Iwano et al., <xref ref-type="bibr" rid="B52">2012</xref>; Varela-Nallar and Inestrosa, <xref ref-type="bibr" rid="B120">2013</xref>). In addition to its role in granule cell specification, differentiation, and survival (reviewed by Karalay and Jessberger, <xref ref-type="bibr" rid="B58">2011</xref>), recent data in mouse showed that, from late embryonic stages, Prox1 is also expressed in subsets of neocortical and hippocampal interneurons, which derive from the caudolateral ganglionic eminence and the preoptic area of the subpallium (Rubin and Kessaris, <xref ref-type="bibr" rid="B105">2013</xref>). In spite of the abundance of data on HF development, very little is known on the genes that regulate the development of the entorhinal cortex in mammals.</p>
<p>A hippocampal formation, involved in spatial navigation and memory formation, has been identified in a topologically comparable pallial position in non-mammalian amniotes (sauropsids, i.e., birds and reptiles) and in several anamniotes (reviewed by Rodr&#x000ED;guez et al., <xref ref-type="bibr" rid="B103">2002</xref>; Reiner et al., <xref ref-type="bibr" rid="B100">2004</xref>). Comparative studies using an evolutionary developmental biology (evodevo) approach are turning extremely useful for understanding not only the origin but also many aspects of both the anatomical and functional organization of brain regions (Puelles and Medina, <xref ref-type="bibr" rid="B97">2002</xref>; Medina and Abell&#x000E1;n, <xref ref-type="bibr" rid="B76">2009</xref>; Medina et al., <xref ref-type="bibr" rid="B77">2011</xref>; Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B1">2013</xref>). However, very little is known on the regulatory genes involved in the development of the HF and entorhinal cortex in non-mammals. Herein, we carried out a comparative study of the combinatorial mRNA expression patterns of <italic>Lef1</italic>, several <italic>LIM</italic>-homeobox (<italic>Lhx2, Lhx5</italic>, and <italic>Lhx9</italic>) and <italic>LIM</italic>-only (<italic>Lmo3</italic> and <italic>Lmo4</italic>) genes, and <italic>Prox1</italic> in the developing medial pallium of mouse and chicken. Although the expression of all of these genes was previously studied in the developing dorsomedial pallium of mouse (Galceran et al., <xref ref-type="bibr" rid="B41">2000</xref>; Bulchand et al., <xref ref-type="bibr" rid="B25">2001</xref>, <xref ref-type="bibr" rid="B26">2003</xref>; Zhou et al., <xref ref-type="bibr" rid="B132">2004</xref>; Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>, <xref ref-type="bibr" rid="B4">2010</xref>; Lavado et al., <xref ref-type="bibr" rid="B64">2010</xref>), herein we analyzed in detail their combinatorial expression patterns in order to: (1) distinguish molecularly the whole ventricular sector of the medial pallium and the different structures it produces in mouse; (2) discern whether the entorhinal cortex develops from the medial pallium or from another embryonic pallial sector; and (3) compare these patterns in mouse with those of the orthologous genes in chicken, as a contribution to understand hippocampal evolution. Our data allowed the identification of dentate gyrus/CA3-like, CA1/subicular-like, and entorhinal-like comparable sectors in mouse and chicken, and point to the existence of mostly conserved molecular networks involved in hippocampal complex development.</p>
</sec>
<sec sec-type="materials and methods" id="s2">
<title>Materials and methods</title>
<p>Mouse embryos (Swiss) from embryonic day 11.5 (E11.5) until birth and chicken embryos from embryonic day 6 (E6, HH29) until 2 days after hatching (P2) were used in the present study. All animals were treated according to the regulations and laws of the European Union (86/609/EEC) and the Spanish Government (Royal Decree 1021/2005) for care and handling of animals in research. The protocols used were approved by the Committee for handling and care of research animals of the University of Lleida. The mouse embryos were obtained from pregnant females, and were processed and fixed as previously described (Garc&#x000ED;a-L&#x000F3;pez et al., <xref ref-type="bibr" rid="B42">2008</xref>). The chicken embryos were obtained from fertilized eggs bought in a farm, which were incubated in a forced-draft incubator until the desired embryonic stage. The chicken embryos were staged according to Hamburger and Hamilton (<xref ref-type="bibr" rid="B47">1951</xref>). Upon extraction, the brains of earlier embryos (E11.5&#x02013;E15.5 in mouse; 6&#x02013;11 days incubation in chicken: E6&#x02013;E11 or HH29-HH37) were dissected and fixed by immersion in 4% paraformaldehyde diluted in 0.1 M phosphate-buffered saline (pH 7.5; PBS) at 4&#x000B0;C during 24 h. Older embryos (E16.5&#x02013;E18.5 in mouse; from E12 or HH38 to pre-hatching in chicken) and P0&#x02013;P2 animals were first deeply anesthetized with sodium pentobarbital (Dolethal, 15 mg/kg), and perfused transcardially with NaCl saline solution (0.9% for mouse; 0.75% for chicken), followed by phosphate-buffered 4% paraformaldehyde (pH 7.5). The brains were then dissected and postfixed overnight at 4&#x000B0;C. After fixation, the brains were embedded in 4% agarose in PBS, sectioned at 80&#x02013;120 &#x003BC;m for <italic>in situ</italic> hybridization in the transversal or horizontal planes using a vibratome (Leica VT1000S), and were subsequently processed as floating sections.</p>
<sec>
<title><italic>In situ</italic> hybridization</title>
<p>Brain sections were processed for <italic>in situ</italic> hybridization following a variation of the standard procedure using digoxigenin-labeled riboprobes (Medina et al., <xref ref-type="bibr" rid="B78">2004</xref>; Garc&#x000ED;a-L&#x000F3;pez et al., <xref ref-type="bibr" rid="B42">2008</xref>; Abell&#x000E1;n and Medina, <xref ref-type="bibr" rid="B3">2009</xref>). The riboprobes were synthesized from cDNAs of different mouse or chicken genes.</p>
<p>The cDNAs from mouse genes were obtained from other laboratories:</p>
<list list-type="simple">
<list-item><p><italic>Lef1</italic> (Galceran et al., <xref ref-type="bibr" rid="B41">2000</xref>; bp 1&#x02013;729; Genbank accession no: NM_010703);</p></list-item>
<list-item><p><italic>Lhx2</italic> (plasmid obtained from S. R&#x000E9;taux&#x00027;s lab; R&#x000E9;taux et al., <xref ref-type="bibr" rid="B101">1999</xref>; bp 1&#x02013;1300; Genbank accession no: NM_010710.3);</p></list-item>
<list-item><p><italic>Lhx5</italic> (plasmid obtained from H. Westphal&#x00027;s lab; Zhao et al., <xref ref-type="bibr" rid="B131">1999</xref>; bp 1&#x02013;2226; Genbank accession no: U61155.1);</p></list-item>
<list-item><p><italic>Lhx9</italic> (plasmid obtained from S. R&#x000E9;taux&#x00027;s lab; R&#x000E9;taux et al., <xref ref-type="bibr" rid="B101">1999</xref>; bp 1&#x02013;1016 [full lenght]; Genbank accession no: AF134761);</p></list-item>
<list-item><p><italic>Lmo3</italic> (plasmid obtained from J.L.R. Rubenstein&#x00027;s lab; Bulchand et al., <xref ref-type="bibr" rid="B25">2001</xref>; bp 1&#x02013;2101 [full lenght]; Genbank accession no: NM_207222);</p></list-item>
<list-item><p><italic>Lmo4</italic> (plasmid obtained from J.L.R Rubenstein&#x00027;s lab; Bulchand et al., <xref ref-type="bibr" rid="B25">2001</xref>; bp 1&#x02013;498 [full lenght]; Genbank accession no: AF074600).</p></list-item>
</list>
<p>The cDNAs from chicken genes were purchased [cDNA ESTs purchased from ARK-genomics (Roslin Institute; Midlothian, UK) or Geneservice Limited (Cambridge, UK)], or obtained from other laboratories, as indicated below. The purchased clones were obtained from the BBSRC ChickEST Database (Boardman et al., <xref ref-type="bibr" rid="B23">2002</xref>), and have a corresponding Genbank accesssion number:</p>
<list list-type="simple">
<list-item><p><italic>cLef1</italic> (bp 1&#x02013;901; GenBank accession no: CR391621.1; purchased; BBSRC ChickEST Database: clone ChEST891i13);</p></list-item>
<list-item><p><italic>cLhx2</italic> (Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>; bp 208&#x02013;939; Genbank accession no: NM_204889);</p></list-item>
<list-item><p><italic>cLhx5</italic> (Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B4">2010</xref>; bp 49&#x02013;1042; Genbank accession no: XM_001234552);</p></list-item>
<list-item><p><italic>cLhx9</italic> (Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>; bp 596&#x02013;1502; Genbank accession no: NM_205426);</p></list-item>
<list-item><p><italic>cLmo3</italic> (Abell&#x000E1;n and Medina, <xref ref-type="bibr" rid="B3">2009</xref>; bp 1&#x02013;666; Genbank accession no: CR406209; purchased; BBSRC ChickEST Database: clone ChEST853b21);</p></list-item>
<list-item><p><italic>cLmo4</italic> (Abell&#x000E1;n and Medina, <xref ref-type="bibr" rid="B3">2009</xref>; purchased; bp 307&#x02013;1078; Genbank accession no: AF532926; purchased; BBSRC ChickEST Database: clone ChEST54p6);</p></list-item>
<list-item><p><italic>cProx1</italic> (bp 1&#x02013;841; GenBank accession no: BU214594; purchased; BBSRC ChickEST Database: clone ChEST49e24).</p></list-item>
<list-item><p><italic>cWnt8b</italic> (641 bp; Hollyday et al., <xref ref-type="bibr" rid="B50">1995</xref>; Garda et al., <xref ref-type="bibr" rid="B43">2002</xref>; Genbank accession no: NC_006093.3).</p></list-item>
</list>
<p>We used PCR to obtain the DNA template employed for synthesizing the riboprobe. We synthesized the antisense digoxigenin-labeled riboprobes using Roche Diagnostics&#x00027;s (Mannheim, Germany) protocols for the genes mentioned above. Before hybridization, the sections were abundantly washed in PBS containing 0.1% Tween-20 (PBT 1X), prehybridized in hybridization buffer (HB) for 2 h at 58&#x000B0;C, and then hybridized in HB containing the riboprobe overnight at 58&#x000B0;C (0.5&#x02013;1 &#x003BC;g/ml, depending on the probe and embryo size). The hybridization buffer contained 50% of deionized formamide, 1.3X standard saline citrate (SSC; pH 5), 5 mM ethylene-diamine-tetraacetic acid (EDTA; pH 8.0; Sigma-Aldrich, Steinheim, Germany), 1 mg/ml of yeast tRNA (Sigma-Aldrich), 0.2% Tween-20, 100 &#x003BC;g/ml of heparin (Sigma-Aldrich), completed with water (free of RNAase and DNAase; Sigma-Aldrich). Following hybridization, the sections were washed with a mix 1:1 of MABT 1X (1.2% maleic acid, 0.8% NaOH, 0.84% NaCl, and 0.1% Tween-20) and HB at 58&#x000B0;C during 20 min and washed abundantly at room temperature with MABT 1X (about 2 h). Following this, the sections were blocked with a solution containing blocking reagent (Roche), MABT 1X and sheep serum (Sigma) for 4 h at room temperature, then incubated in an antibody against digoxigenin (alkaline-phosphatase coupled anti-digoxigenin; diluted 1:3500; Roche Diagnostics) overnight at 4&#x000B0;C, later washed with MABT 1X and finally revealed with BM purple (Roche Diagnostics). Sections were then mounted on glycerol gelatine (Sigma).</p>
</sec>
<sec>
<title>Immunohistochemistry</title>
<p>Some series of chicken embryonic brain sections (E8&#x02013;E12) were processed for immunohistochemistry, following a procedure previously described (Abell&#x000E1;n and Medina, <xref ref-type="bibr" rid="B3">2009</xref>).</p>
<p>In order to detect radial glial fibers in chicken, we used a monoclonal antibody against chicken vimentin (H5 from Developmental Hybridoma Bank, Iowa, USA; Herman et al., <xref ref-type="bibr" rid="B48">1993</xref>). The specificity of this antibody has beed shown by the manufacturer using Western blot (labeling a band of roughly 52 kDa, corresponding to the protein vimentin).</p>
<p>The immunohistochemical procedure was as follows. After washing in PBS, the sections were incubated in the primary antibody, diluted 1:50 in PBS containing 0.3% Triton X-100, for 2 days at 4&#x000B0;C, under constant and gentle agitation. Then, the sections were washed and incubated in a secondary antiserum for 1 h at room temperature (biotinylated goat anti-mouse IgG; diluted 1:200; Vector, Burlingame, CA, USA). Following this, the sections were washed and incubated in the avidin-biotin complex (ABC kit; Vector; 0.003% dilution) for 1 h at room temperature. Finally, the immunolabeling was revealed by 0.05% diaminobenzidine (DAB; Sigma-Aldrich, Steinheim, Germany) in 0.05 M Tris buffer (pH 7.6), containing 0.03% H<sub>2</sub>O<sub>2</sub>.</p>
</sec>
<sec>
<title>Digital images and figures</title>
<p>Digital photographs were taken on a Leica microscope (DMR HC) equipped with a Zeiss Axiovision digital camera. Digital images were adjusted for brightness/contrast using Adobe PhotoShop and figures were mounted and labeled using Macromedia FreeHand 10.</p>
</sec>
<sec>
<title>Nomenclature</title>
<p>Finally, the nomenclature used in the present study for the chicken telencephalon generally followed that proposed by Reiner et al. (<xref ref-type="bibr" rid="B100">2004</xref>), except for developmental units, hippocampal subdivisons, and the entorhinal cortex, for which it followed Redies et al. (<xref ref-type="bibr" rid="B98">2001</xref>), Puelles et al. (<xref ref-type="bibr" rid="B96">2007</xref>), Abell&#x000E1;n et al. (<xref ref-type="bibr" rid="B2">2009</xref>). For the mouse embryonic brain we primarily followed Jacobowitz and Abbott (<xref ref-type="bibr" rid="B53">1997</xref>), and for the mature mouse hippocampal complex, we followed Paxinos and Franklin (<xref ref-type="bibr" rid="B90">2004</xref>) and Witter (<xref ref-type="bibr" rid="B126">2012</xref>).</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<p>Herein we present data on the expression of <italic>Lef1, Lhx2, Lhx9, Lmo3</italic>, and <italic>Lmo4</italic> in the mouse embryonic medial pallium (summarized in Table <xref ref-type="table" rid="T1">1</xref>, and shown in Figures <xref ref-type="fig" rid="F1">1</xref>&#x02013;<bold>5</bold>), and data on the expression of <italic>cLef1, cLhx2, cLhx9, cProx1, cLmo3</italic>, and <italic>cLmo4</italic> in the chicken embryonic medial pallium (summarized in Table <xref ref-type="table" rid="T2">2</xref>, and shown in <bold>Figures 6</bold>&#x02013;<bold>11</bold>). The figures are organized according to both the species and the age, showing first those for the mouse and then those for the chicken, and within each species showing first those of early embryonic stages, followed by intermediate stages and finally those for late stages. For comparative purposes we also included published data on <italic>Prox1</italic> in mouse in Table <xref ref-type="table" rid="T1">1</xref> (Zhou et al., <xref ref-type="bibr" rid="B132">2004</xref>; Lavado et al., <xref ref-type="bibr" rid="B64">2010</xref>, and the Allen Developing Mouse Brain Atlas). To assist in the distinction of the medial pallial ventricular sector from other pallial sectors, we also analyzed <italic>Lhx5</italic> at early developmental stages in mouse and chicken (Tables <xref ref-type="table" rid="T1">1</xref>, <xref ref-type="table" rid="T2">2</xref>). In addition to its expression in the pallium, and as noted previously (Oosterwegel et al., <xref ref-type="bibr" rid="B88">1993</xref>; Galceran et al., <xref ref-type="bibr" rid="B41">2000</xref>; Gupta et al., <xref ref-type="bibr" rid="B46">2012</xref>; Choe et al., <xref ref-type="bibr" rid="B31">2013</xref>), <italic>Lef1</italic> was also expressed in other forebrain regions such as the thalamus (Figures <xref ref-type="fig" rid="F1">1D,E</xref>), as well as in the mesoderm and <italic>pia mater</italic> (neural crest-derived part of the meninges) covering the forebrain during development (arrows in <bold>Figure 6B</bold>), in the developing choroid plexus, and in forebrain blood vessels (<bold>Figures 3</bold>, <bold>6A&#x02013;C</bold>).</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p><bold>Combinatorial expression of <italic>Lef1</italic> and other regulatory genes in the pallial progenitor zones and hippocampal complex primordia of developing mice</bold>.</p></caption>
<graphic xlink:href="fnana-08-00059-i0001.tif"/>
<table-wrap-foot>
<p><italic>&#x02212;, no expression; &#x0002B;, weak expression; &#x0002B;&#x0002B;, moderate expression; &#x0002B;&#x0002B;&#x0002B;, strong expression.</italic></p>
<p><italic>chp, choroid plexus; dgm, dentate gyrus migratory stream; m, mantle; o, outer or marginal zone; rp, roof plate; svz, subventricular zone; vz, ventricular zone. For other abbreviations see list.</italic></p>
<p><italic><sup>&#x0002A;</sup>Based on published data (Prox1: Zhou et al., <xref ref-type="bibr" rid="B132">2004</xref>; Lavado et al., <xref ref-type="bibr" rid="B64">2010</xref>; Lhx2: Allen Brain Atlas web site).</italic></p>
</table-wrap-foot>
</table-wrap>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p><bold>Expression of <italic>Lef1</italic> in mouse embryonic telencephalon at E13.5.</bold> Digital images of coronal sections of mouse embryonic telencephalon (E13.5), from rostral <bold>(A)</bold> to caudal <bold>(E)</bold> levels, hybridized for <italic>Lef1</italic>. Note the strong expression in the ventricular zone of the medial pallium and pallial septum. For abbreviations see list. Scale bar: <bold>(A)</bold> &#x0003D; 200 &#x003BC;m (applies to all).</p></caption>
<graphic xlink:href="fnana-08-00059-g0001.tif"/>
</fig>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p><bold>Combinatorial expression of <italic>Lef1</italic> and other regulatory genes in the pallial progenitor zones and hippocampal complex primordia of developing chicken</bold>.</p></caption>
<graphic xlink:href="fnana-08-00059-i0002.tif"/>
<table-wrap-foot>
<p><italic>&#x02212;, no expression; &#x0002B;, weak expression; &#x0002B;&#x0002B;, moderate expression; &#x0002B;&#x0002B;&#x0002B;, strong expression</italic>.</p>
<p><italic>chp, choroid plexus; iz, intermediate zone; m, mantle; m<sup>d</sup>, deep part of mantle; mes, mesoderm; rp, roof plate; svz, subventricular zone; vz, ventricular zone. For other abbreviations see list</italic>.</p>
<p><sup>&#x0002A;</sup><italic>APHcl is referred as dorsolateral corticoid area or CDL by the followers of the conclusions of the avian brain nomenclature forum (Reiner et al., <xref ref-type="bibr" rid="B100">2004</xref>; see also Atoji and Wild, <xref ref-type="bibr" rid="B13">2005</xref>). Herein we use APHcl as a preferred term to emphasize its relation to other APH subdivisions (see also Redies et al., <xref ref-type="bibr" rid="B98">2001</xref>; Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>)</italic>.</p>
<p><sup>&#x0002A;</sup><italic><sup>1</sup>DLP is referred as caudal dorsolateral pallium (CDL) in the atlas of the chick brain, by Puelles et al. (<xref ref-type="bibr" rid="B96">2007</xref>), and was previously included as part of the avian temporo-parieto-occipital area or TPO (see Discussion in Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>)</italic>.</p>
</table-wrap-foot>
</table-wrap>
<sec>
<title>Gene expression patterns with respect to major pallial subdivisions in mouse and chicken</title>
<p>The mRNA expression patterns of all genes analyzed were largely conserved between mouse and chicken, although some differences were also appreciated. During very early development (E11.5 in mouse; E6-E7 in chicken), <italic>Lef1</italic> was strongly and distinctly expressed in the ventricular zone (vz) of the medial pallium (MP) and the pallial septum (PSe) (chicken: <bold>Figures 6A,B</bold>), although it also showed generally weak expression in the vz of other pallial sectors. By E13.5 in mouse (Figures <xref ref-type="fig" rid="F1">1A,B,D,E</xref>) and E8 in chicken (<bold>Figures 6C</bold>, <bold>7A</bold>), <italic>Lef1</italic> became primarily restricted to the vz of the medial pallium and pallial septum (Tables <xref ref-type="table" rid="T1">1A</xref>, <xref ref-type="table" rid="T2">2A</xref>).</p>
<p>At E13.5&#x02013;E15.5 in mouse (Figures <xref ref-type="fig" rid="F1">1</xref>&#x02013;<bold>3</bold>) and E8-E9 in chicken (<bold>Figures 6</bold>, <bold>7</bold>), the medial pallial sector was characterized by strong or moderate vz expression of <italic>Lef1</italic> (Figures <xref ref-type="fig" rid="F1">1</xref>, <bold>3</bold>, <bold>6C</bold>, <bold>7A</bold>)<italic>, Lhx2</italic> (Figures <xref ref-type="fig" rid="F2">2A&#x02013;D</xref>, <bold>6D,E</bold>), and <italic>Lhx9</italic> (Figures <xref ref-type="fig" rid="F2">2E&#x02013;K</xref>, <bold>6F</bold>, <bold>7B,C</bold>), but not <italic>Lhx5</italic> (Figures <xref ref-type="fig" rid="F1">1C</xref>, <bold>6G</bold>). This feature allowed the distinction of the medial pallium from other progenitor pallial sectors, such as: the pallial septum (PSe), expressing <italic>Lef1</italic> (Figures <xref ref-type="fig" rid="F1">1A</xref>, <bold>6B</bold>), <italic>Lhx2</italic> (<bold>Figure 6E</bold>), <italic>Lhx9</italic> (<bold>Figure 6F</bold>), and also <italic>Lhx5</italic> (Figures <xref ref-type="fig" rid="F1">1C</xref>, <bold>6G</bold>) in the vz; the dorsal pallium (DP), expressing strongly <italic>Lhx2</italic> in the vz (Figures <xref ref-type="fig" rid="F2">2A&#x02013;D</xref>, <bold>6D</bold>), but not <italic>Lef1</italic> (except its medialmost, cingulate-related area; Figures <xref ref-type="fig" rid="F1">1A,B,D</xref>), <italic>Lhx9</italic> (Figures <xref ref-type="fig" rid="F2">2E&#x02013;G</xref>) or <italic>Lhx5</italic> (Figure <xref ref-type="fig" rid="F1">1C</xref>) (data on <italic>Lhx2, Lhx9</italic>, and <italic>Lhx5</italic> in chicken DP is published in Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>, <xref ref-type="bibr" rid="B4">2010</xref>); and the lateral (LP) and ventral (VP) pallia, showing generally weak expression of <italic>Lhx2</italic> in the vz (Figures <xref ref-type="fig" rid="F2">2A</xref>, <bold>6D,E</bold>), but no vz expression of <italic>Lef1</italic> (Figures <xref ref-type="fig" rid="F1">1A,B</xref>, <bold>6C</bold>) nor <italic>Lhx5</italic> (Figures <xref ref-type="fig" rid="F1">1C</xref>, <bold>6G</bold>) (summarized in Tables <xref ref-type="table" rid="T1">1</xref>, <xref ref-type="table" rid="T2">2</xref>; for the lateral pallial sector, we followed a recent redefinition done by Puelles, <xref ref-type="bibr" rid="B93">2014</xref>).</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p><bold>Expression of <italic>Lhx2</italic> and <italic>Lhx9</italic> in mouse embryonic telencephalon at early stages.</bold> Digital images of coronal sections of mouse embryonic telencephalon (<bold>A&#x02013;H</bold>: E12.5; <bold>I&#x02013;K</bold>: E13.5), from intermediate (left panels) to caudal (right panels) levels, hybridized for <italic>Lhx2</italic> <bold>(A&#x02013;D)</bold> or <italic>Lhx9</italic> <bold>(I&#x02013;K)</bold>. Note the strong expression in the ventricular zone of the medial pallium. As noted previously, <italic>Lhx9</italic> is also distinctly expressed in ventral pallial (VP) derivatives, such as part of the basal amygdalar complex (BC) and cortical amygdalar areas (Co, PMCo). Although weak transient expression is also present in part of the dorsal pallium (DP; R&#x000E9;taux et al., <xref ref-type="bibr" rid="B101">1999</xref>), this pallial sector is clearly distinguished from MP and VP based on its distinct position and combinatorial genetic profile (Puelles et al., <xref ref-type="bibr" rid="B95">2000</xref>; Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>). For abbreviations see list. Scale bar: <bold>(A)</bold> &#x0003D; 200 &#x003BC;m (applies to all).</p></caption>
<graphic xlink:href="fnana-08-00059-g0002.tif"/>
</fig>
<p>Based on the combinatorial gene expression patterns studied here and on published data (Puelles et al., <xref ref-type="bibr" rid="B95">2000</xref>, <xref ref-type="bibr" rid="B96">2007</xref>; Medina et al., <xref ref-type="bibr" rid="B78">2004</xref>; Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>; Puelles, <xref ref-type="bibr" rid="B93">2014</xref>), we tentatively distinguished two new pallial sectors, which we named the dorsolateral caudal pallium (DLP) and the ventrolateral caudal pallium (VLP) (Tables <xref ref-type="table" rid="T1">1</xref>, <xref ref-type="table" rid="T2">2</xref>). The DLP was previously described in chicken as a distinct subdivision belonging to either the lateral pallium (Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>) or ventral pallium (Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>), and has been called temporo-parieto-occipital area or pallium externum in some studies (for example, Veenman et al., <xref ref-type="bibr" rid="B121">1995</xref>; Atoji and Wild, <xref ref-type="bibr" rid="B13">2005</xref>). In contrast to the dorsal and lateral pallia, the DLP expressed <italic>Lhx9</italic> in the mantle throughout development (<bold>Figures 6F</bold>, <bold>10A,H,I</bold>) and, for this reason, was previously suggested to be part of the ventral pallium (Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>). However, in contrast to the ventral pallium, the DLP showed abundant vz/mantle expression of <italic>Emx1</italic> (chicken: named CDLx in Figure 10 n of Puelles et al., <xref ref-type="bibr" rid="B95">2000</xref>) and <italic>Lhx2</italic> (<bold>Figure 10B</bold>). In addition, in contrast to the medial pallium, the DLP did not express <italic>Lef1</italic> (<bold>Figure 6C</bold>, Table <xref ref-type="table" rid="T2">2</xref>). Herein, we tentatively identified a comparable pallial subdivision in the mouse, giving rise to the lateral entorhinal cortex (LEnt), with similar topological position and genetic profile [no expression of <italic>Lef1</italic> in vz. (Figures <xref ref-type="fig" rid="F1">1E</xref>, <xref ref-type="fig" rid="F3">3F,G</xref>), but expressing <italic>Lhx9</italic> in the mantle (Figure <xref ref-type="fig" rid="F2">2H</xref>) and <italic>Emx1</italic> in vz/mantle (see Allen Developing Mouse Brain Atlas); Table <xref ref-type="table" rid="T1">1</xref>]. On the other hand, the VLP [for the moment only identified in chicken, and giving rise to the arcopallium (A)] differed from the ventral pallium [giving rise to the nidopallium (N) and piriform cortex (Pir)] for its strong expression of <italic>Lhx9</italic> (<bold>Figures 7B,C</bold>, <bold>9E</bold>, <bold>10D,F,J</bold>; Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>), <italic>Lhx2</italic> (<bold>Figures 7D</bold>, <bold>10E</bold>), and <italic>Emx1</italic> (see Figure 10p in Puelles et al., <xref ref-type="bibr" rid="B95">2000</xref>) in both the ventricular zone and mantle (Table <xref ref-type="table" rid="T2">2</xref>).</p>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p><bold>Expression of <italic>Lef1</italic> in mouse embryonic telencephalon at E15.5.</bold> Digital images of coronal sections of mouse embryonic telencephalon (E15.5), from rostral <bold>(A)</bold> to caudal <bold>(G)</bold> levels, hybridized for <italic>Lef1</italic>. The medial pallial (MP) vz and derivatives show expression of <italic>Lef1</italic>. Note the lack of <italic>Lef1</italic> expression in the vz of the dorsolateral caudal pallium (DLP), giving rise to LEnt. For abbreviations see list. Scale bar: <bold>(A)</bold> &#x0003D; 200 &#x003BC;m (applies to all).</p></caption>
<graphic xlink:href="fnana-08-00059-g0003.tif"/>
</fig>
<p>In addition to the expression in the vz, most derivatives of the medial pallium of mouse and chicken also showed moderate to strong expression of <italic>Lef1</italic> and <italic>Lhx2</italic> at least during early and intermediate developmental stages, while some or many of them also expressed <italic>Lhx9</italic> (see details in next sections; Tables <xref ref-type="table" rid="T1">1</xref>, <xref ref-type="table" rid="T2">2</xref>). These features, linked to the molecular identity of the medial pallial vz, helped to identify and compare the medial pallial derivatives between mouse and chicken. The results on the combinatorial expression of <italic>Lef1</italic> and other developmental regulatory genes in the developing hippocampal complex (including hippocampal formation and entorhinal cortex) are explained in detail below, first for the mouse (Figures <xref ref-type="fig" rid="F1">1</xref>&#x02013;<bold>5</bold>) and then for the chicken (<bold>Figures 6</bold>&#x02013;<bold>11</bold>).</p>
</sec>
<sec>
<title>Combinatorial expression of <italic>Lef1, Lhx2, Lhx9, Lhx5, Lmo3</italic>, and <italic>Lmo4</italic> in the developing hippocampal complex of mouse</title>
<sec>
<title>E12.5&#x02013;E13.5</title>
<p>During early development, the medial pallial sector (MP) of mouse was distinguished by its moderate to strong expression of <italic>Lef1, Lhx2</italic>, and <italic>Lhx9</italic> in the vz and in postmitotic cells migrating into the mantle (Table <xref ref-type="table" rid="T1">1</xref>, Figures <xref ref-type="fig" rid="F1">1</xref>, <xref ref-type="fig" rid="F2">2</xref>). Outside the medial pallium, the only additional pallial sector expressing <italic>Lef1</italic> in the vz was the pallial septum (PSe) and the adjacent part of the dorsal pallium [DP; cingulate part of neocortical primordium (Cg)] (Table <xref ref-type="table" rid="T1">1A</xref>, Figure <xref ref-type="fig" rid="F1">1A</xref>). Based on the expression of <italic>Lef1</italic> (Figures <xref ref-type="fig" rid="F1">1B,D,E</xref>)<italic>, Lhx2</italic> (Figures <xref ref-type="fig" rid="F2">2A&#x02013;D</xref>), and <italic>Lhx9</italic> (Figures <xref ref-type="fig" rid="F2">2E&#x02013;K</xref>), the medial pallium appeared to include the progenitor zones of the <italic>indusium griseum</italic> (rostrally; IG neuroepithelium, ign), the dentate gyrus (DG neuroepithelium, dgn), the CA fields (CA neuropeithelium, can), the subiculum (S neuroepithelium, sn), at least part of the amygdalo-hippocampal transition area (AHi in Figure <xref ref-type="supplementary-material" rid="SM1">S1</xref>), and a medial and caudal part of the entorhinal cortex (corresponding to the primordium of the so-called medial entorhinal cortex; MEnt). In contrast, the lateral entorhinal cortex (LEnt) appeared to derive from a distinct pallial sector, the DLP, which vz did not express <italic>Lef1</italic> (Figure <xref ref-type="fig" rid="F1">1E</xref>) or <italic>Lhx9</italic> (Figure <xref ref-type="fig" rid="F2">2H</xref>). Nevertheless, the lateral entorhinal cortical plate showed moderate <italic>Lef1</italic> expression (Figure <xref ref-type="fig" rid="F1">1E</xref>), resembling the adjacent part of the neocortex cortical plate.</p>
</sec>
<sec>
<title>E15.5&#x02013;E16.5</title>
<p><italic>Lef1, Lhx2</italic>, and <italic>Lhx9</italic> continued to be expressed in the vz and mantle of the mouse medial pallium during intermediate development [Table <xref ref-type="table" rid="T1">1B</xref>, Figures <xref ref-type="fig" rid="F3">3</xref>, <xref ref-type="fig" rid="F4">4</xref>; data on <italic>Lhx2</italic> at E15.5 is available in the Allen Developing Mouse Brain Atlas and published elsewhere (Bulchand et al., <xref ref-type="bibr" rid="B26">2003</xref>); for comparative reasons, such data is included in Table <xref ref-type="table" rid="T1">1B</xref>]. The expression of <italic>Lef1</italic> was moderate to strong in all medial pallial-derived areas [<italic>indusium griseum</italic> (IG), dentate gyrus (DG), CA fields, subiculum (S), medial entorhinal cortex (MEnt); Figure <xref ref-type="fig" rid="F3">3</xref>], while <italic>Lhx9</italic> remained moderate to strong in most of them but started to be downregulated in the developing CA1 field and, especially, in the developing subiculum (Figures <xref ref-type="fig" rid="F4">4A&#x02013;C</xref>).</p>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p><bold>Expression of <italic>Lhx9, Lmo3</italic>, and <italic>Lmo4</italic> in mouse embryonic telencephalon at intermediate stages.</bold> Digital images of coronal sections of mouse embryonic telencephalon (E15.5 or E16.5), at intermediate <bold>(A&#x02013;E,H)</bold> or caudal <bold>(F,G,I&#x02013;K)</bold> levels, hybridized for <italic>Lhx9, Lmo3</italic>, or <italic>Lmo4</italic>. For abbreviations see list. Scale bar: <bold>(A)</bold> &#x0003D; 1 mm (applies to <bold>A,F,G,I&#x02013;K</bold>); <bold>(B)</bold> &#x0003D; 300 &#x003BC;m (applies to <bold>B&#x02013;E,H</bold>).</p></caption>
<graphic xlink:href="fnana-08-00059-g0004.tif"/>
</fig>
<p>During intermediate development, medial pallial derivatives also showed expression of <italic>Lmo4</italic> and <italic>Lmo3</italic>, with different patterns (Table <xref ref-type="table" rid="T1">1B</xref>, Figure <xref ref-type="fig" rid="F4">4</xref>). <italic>Lmo4</italic> showed moderate to strong expression in the developing CA fields, subiculum, and medial entorhinal cortex, while the developing <italic>indusium griseum</italic> and dentate gyrus only showed weak or weak to moderate <italic>Lmo4</italic> expression, respectively (Figures <xref ref-type="fig" rid="F4">4D&#x02013;G</xref>). On the other hand, <italic>Lmo3</italic> showed weak or moderate expression in the developing CA1, subiculum, and medial entorhinal cortex, but was not expressed in the developing CA3, dentate gyrus and <italic>indusium griseum</italic> (Figures <xref ref-type="fig" rid="F4">4H&#x02013;J</xref>).</p>
<p>At E15.5&#x02013;E16.5, while the medial entorhinal cortex (MEnt) showed gene expression patterns highly similar to those in other medial pallial derivatives, the lateral entorhinal cortex (LEnt, a DLP derivative) differed in the expression of <italic>Lef1</italic> (Figures <xref ref-type="fig" rid="F3">3F,G</xref>), <italic>Lhx9</italic> (Figure <xref ref-type="fig" rid="F4">4K</xref>), <italic>Lmo4</italic> (Figure <xref ref-type="fig" rid="F4">4G</xref>), and <italic>Lmo3</italic> (Figures <xref ref-type="fig" rid="F4">4I,J</xref>; see also Table <xref ref-type="table" rid="T1">1B</xref>). For example, in the DLP/LEnt, expression of <italic>Lef1</italic> (Figures <xref ref-type="fig" rid="F3">3F,G</xref>) and <italic>Lhx9</italic> (Figure <xref ref-type="fig" rid="F4">4K</xref>) was only weak or moderate, and restricted to the mantle. Moreover, in the LEnt, expression of <italic>Lmo4</italic> was only weak to moderate (Figure <xref ref-type="fig" rid="F4">4G</xref>), while <italic>Lmo3</italic> showed a bi-layered expression pattern (apparently superficial and deep to the lamina dissecans or layer IV), making it different from the MEnt (Figures <xref ref-type="fig" rid="F4">4I,J</xref>).</p>
</sec>
<sec>
<title>E17.5-P0</title>
<p>During prenatal stages, the expression of <italic>Lef1</italic> became weak in most of the medial pallium, and almost disappeared in the CA3 field, with the only exception of the dentate gyrus (DG), where it remained moderate to strong (Figures <xref ref-type="fig" rid="F5">5A&#x02013;D</xref>). In contrast, the lateral entorhinal cortex retained moderate expression of <italic>Lef1</italic>.</p>
<fig id="F5" position="float">
<label>Figure 5</label>
<caption><p><bold>Expression of <italic>Lef1, Lhx2, Lmo3</italic>, and <italic>Lmo4</italic> in mouse embryonic telencephalon at prenatal or neonatal ages.</bold> Digital images of coronal sections of prenatal or neonatal mouse telencephalon (E17.5, E18.5, or P0), at intermediate <bold>(A,B,F)</bold> or caudal <bold>(C&#x02013;E&#x02033;,G)</bold> levels, hybridized for <italic>Lef1, Lhx2, Lmo3</italic>, or <italic>Lmo4</italic>. For abbreviations see list. Scale bar: <bold>(A)</bold> &#x0003D; 200 &#x003BC;m (applies to <bold>A&#x02013;D,F,G</bold>). <bold>(E)</bold> &#x0003D; 1 mm (applies to <bold>E&#x02013;E&#x02033;</bold>).</p></caption>
<graphic xlink:href="fnana-08-00059-g0005.tif"/>
</fig>
<p>At perinatal stages, <italic>Lhx2</italic> (Figures <xref ref-type="fig" rid="F5">5E&#x02013;E</xref>&#x02033;)<italic>, Lmo3</italic> (Figure <xref ref-type="fig" rid="F5">5F</xref>), and <italic>Lmo4</italic> (Figure <xref ref-type="fig" rid="F5">5G</xref>) intensified their expression in the pallium, but retained the specific patterns observed before for the different pallial divisions and subdivisions (Figures <xref ref-type="fig" rid="F5">5E&#x02013;G</xref>). The expression of <italic>Lhx2</italic> was strong or very strong in most subdivisions of the medial pallium (including vz and mantle; Figures <xref ref-type="fig" rid="F5">5E&#x02013;E</xref>&#x02033;), except the <italic>indusium griseum</italic>, where the expression was moderate. <italic>Lmo3</italic> showed very strong expression in the principal cell layer of the subiculum (S) and CA1, and moderate expression in the <italic>indusium griseum</italic> (IG) and medial entorhinal cortex (MEnt), but its expression was very weak in CA3 and absent in the dentate gyrus (DG) (Figure <xref ref-type="fig" rid="F5">5F</xref>). <italic>Lmo4</italic> expression was moderate to strong in most medial pallial subdivisions (with the pyramidal cell layer of CA1 showing the strongest expression), except the <italic>indusium griseum</italic> and the dentate gyrus, which showed only weak expression (Figure <xref ref-type="fig" rid="F5">5G</xref>). On the other hand, <italic>Lhx9</italic> was moderate to strongly expressed in the <italic>indusium griseum</italic>, dentate gyrus, CA3 field, and medial entorhinal cortex, but appeared completely downregulated in the CA1 and subiculum at E18.5.</p>
<p>Regarding the lateral entorhinal cortex, at perinatal stages continued showing weak to moderate expression of <italic>Lhx2</italic> (Figures <xref ref-type="fig" rid="F5">5E,E</xref>&#x02032;), <italic>Lhx9</italic>, and <italic>Lmo3</italic> (Figure <xref ref-type="fig" rid="F5">5F</xref>), as during previous stages. In contrast, expression of <italic>Lmo4</italic> became strong at these stages (Figure <xref ref-type="fig" rid="F5">5G</xref>).</p>
</sec>
</sec>
<sec>
<title>Combinatorial expression of <italic>cLef1, cLhx2, cLhx9, cLhx5, cProx1, cLmo3</italic>, and <italic>cLmo4</italic> in the developing hippocampal complex of chicken</title>
<sec>
<title>E8</title>
<p>Similarly to the mouse, at E8 the medial pallial sector (MP) of chicken embryos could be distinguished by its moderate to strong expression of <italic>cLef1</italic> (Figures <xref ref-type="fig" rid="F6">6C</xref>, <xref ref-type="fig" rid="F7">7A</xref>)<italic>, cLhx2</italic> (Figures <xref ref-type="fig" rid="F6">6D,E</xref>, <xref ref-type="fig" rid="F7">7D</xref>), and <italic>cLhx9</italic> (Figures <xref ref-type="fig" rid="F6">6F</xref>, <xref ref-type="fig" rid="F7">7B,C</xref>) in the vz (Table <xref ref-type="table" rid="T2">2A</xref>). The rest of the pallium did not express <italic>cLef1</italic> in the vz at E8, and the different pallial subdivisions [dorsal (DP), dorsolateral-caudal (DLP), lateral (LP), ventral (VP), ventrolateral-caudal (VLP)] could additionally be distinguished by a region-specific combinatorial expression of <italic>cLhx2, cLhx9, cLmo3</italic>, and <italic>cLmo4</italic> in the vz, subventricular zone (svz, identified based on Charvet et al., <xref ref-type="bibr" rid="B29">2009</xref>), and/or mantle zones (Table <xref ref-type="table" rid="T2">2A</xref>).</p>
<fig id="F6" position="float">
<label>Figure 6</label>
<caption><p><bold>Expression of <italic>cLef1, cLhx2, cLhx9</italic>, and <italic>cLhx5</italic> in chicken embryonic telencephalon at early stages.</bold> Digital images of coronal sections of chicken embryonic telencephalon (E7.5 or E8), at rostral <bold>(A,D)</bold> or intermediate <bold>(B,C,E&#x02013;G)</bold> levels, hybridized for <italic>cLef1, cLhx2, cLhx9</italic>, or <italic>cLhx5</italic>. Note the moderate to strong expression of <italic>cLef1, cLhx2</italic>, and <italic>cLhx9</italic> in the ventricular zone of the medial pallium (MP) and pallial septum (PSe). The pallial septum also expresses <italic>cLhx5</italic>. From E8, the dorsolateral pallium (DLP) can be distinguished from MP because it does not express <italic>cLef1</italic>, but shows moderate to strong expression of <italic>cLhx9</italic> in the mantle. Note the expression of <italic>cLef1</italic> in the meninges (<italic>pia mater</italic>; arrows in <bold>B</bold>), in forebrain blood vessels, and in some cell aggregates around the lateral forebrain bundle (arrow in <bold>C</bold>). For abbreviations see list. Scale bar: <bold>(A)</bold> &#x0003D; 200 &#x003BC;m (applies to <bold>A,B</bold>); <bold>(C)</bold> &#x0003D; 400 &#x003BC;m; <bold>(D)</bold> &#x0003D; 500 &#x003BC;m (applies to <bold>D&#x02013;F</bold>); <bold>(G)</bold> &#x0003D; 500 &#x003BC;m.</p></caption>
<graphic xlink:href="fnana-08-00059-g0006.tif"/>
</fig>
<fig id="F7" position="float">
<label>Figure 7</label>
<caption><p><bold>Expression of <italic>cLef1, cLhx2, cLhx9, cLmo3</italic>, and <italic>cLmo4</italic> in the chicken embryonic telencephalon at early stages.</bold> Digital images of coronal sections of chicken embryonic telencephalon (E8), at intermediate <bold>(E,F)</bold> or caudal <bold>(A&#x02013;D,G,H)</bold> levels, hybridized for <italic>cLef1, cLhx2, cLhx9, cLmo3</italic>, or <italic>cLmo4</italic>. The medial pallium is characterized by strong expression of <italic>cLef1, cLhx2</italic>, and <italic>cLhx9</italic> in the ventricular zone, and strong expression of <italic>cLhx2</italic> and <italic>cLmo4</italic> in the mantle. For abbreviations see list. Scale bar: <bold>(A)</bold> &#x0003D; 400 &#x003BC;m; <bold>(B)</bold> &#x0003D; 500 &#x003BC;m (applies to <bold>B&#x02013;H</bold>).</p></caption>
<graphic xlink:href="fnana-08-00059-g0007.tif"/>
</fig>
<p>Based on the expression of <italic>cLef1</italic> (Figures <xref ref-type="fig" rid="F6">6C</xref>, <xref ref-type="fig" rid="F7">7A</xref>)<italic>, cLhx2</italic> (Figures <xref ref-type="fig" rid="F6">6D,E</xref>, <xref ref-type="fig" rid="F7">7E</xref>), and <italic>cLhx9</italic> (Figures <xref ref-type="fig" rid="F6">6F</xref>, <xref ref-type="fig" rid="F7">7B,C</xref>) at the vz, it appeared that the medial pallium in chicken included the progenitor zones of the hippocampus (including the V-shaped area) and the parahippocampal areas (APH), including its caudolateral part (APHcl), which is referred as dorsolateral corticoid area or CDL by some authors (see Discussion; Table <xref ref-type="table" rid="T2">2A</xref>). At caudal levels, the avian medial pallium also appeared to include the progenitor zone of the so-called entorhinal cortex (Ent) and the amygdalohippocampal area (AHi, at least its transition part, as defined by Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>) (Figures <xref ref-type="fig" rid="F7">7A,B</xref>). Regarding other genes, the chicken medial pallium also showed moderate to strong expression of <italic>cLmo4</italic> in the mantle (Figures <xref ref-type="fig" rid="F7">7E,H</xref>; Table <xref ref-type="table" rid="T2">2A</xref>), and expression of <italic>cLmo3</italic> in the intermediate zone (a mantle part near the vz, possibly containing migratory neuroblasts) in the APH, with an increasing gradient toward caudolateral levels (Figures <xref ref-type="fig" rid="F7">7F,G</xref>).</p>
</sec>
<sec>
<title>E10&#x02013;E14</title>
<p>During these stages, the medial pallium continued to show distinct expression of <italic>cLef1, cLhx2</italic>, and <italic>cLhx9</italic>, with patterns similar to those found previously (Figures <xref ref-type="fig" rid="F8">8</xref>&#x02013;<bold>10</bold>; Table <xref ref-type="table" rid="T2">2B</xref>). As in previous stages, at E10&#x02013;E14 <italic>cLef1</italic> was expressed in the vz of the medial pallium (MP), although only in part of it because it was downregulated in the vz of APHl, APHcl, and entorhinal cortex (Ent) (Figures <xref ref-type="fig" rid="F8">8C,D,G,G</xref>&#x02032;). In addition to the vz, the expression of <italic>cLef1</italic> now extended into the medial pallial mantle (Figures <xref ref-type="fig" rid="F8">8A&#x02013;D,G,G</xref>&#x02032;; Table <xref ref-type="table" rid="T2">2B</xref>). The expression of <italic>cLef1</italic> was moderate to strong in the hippocampus (V-shaped area, here named dentate gyrus or DG, as explained below) and the different APH subdivisions, except the APHcl and the Ent where <italic>cLef1</italic> expression was only weak (Figures <xref ref-type="fig" rid="F8">8A&#x02013;D,G,G</xref>&#x02032;; Table <xref ref-type="table" rid="T2">2B</xref>). The expression of <italic>cLef1</italic> allowed distinction of a novel subdivision, called by us the rostral APH (APHr), which showed very strong expression (Figures <xref ref-type="fig" rid="F8">8A&#x02013;D</xref>). The APHr may correspond or include the apical part of APH described in the chick brain atlas by Puelles et al. (<xref ref-type="bibr" rid="B96">2007</xref>). Comparison of <italic>cLef1</italic> with radial glial fiber disposition suggested that APHr vz occupied the rostralmost pole of APH as seen in frontal section (Figure <xref ref-type="fig" rid="F8">8C</xref>); a group of <italic>cLef1</italic>-expressing cells appeared to separate from this rostral location, suggesting that they migrated tangentially toward gradually more distant superficial, dorsomedial and caudal positions; we called this migrated part ectopic APHr or APHre (Figures <xref ref-type="fig" rid="F8">8B,D,G,I</xref>). At intermediate and caudal levels, this extension of APHr (APHre) occupied a small and distinct superficial area at the surface of APHm (Figures <xref ref-type="fig" rid="F8">8D,G</xref>; compare Figures <xref ref-type="fig" rid="F8">8G,I</xref>), which appeared to correspond to the parvocellular hippocampal area identified by Atoji and Wild in adult pigeons (<xref ref-type="bibr" rid="B12">2004</xref>). During intermediate developmental stages, <italic>cLef1</italic> started to be expressed in restricted parts of the mantle of both the dorsal pallium (hyperpallium, H) and the lateral pallium (mesopallium, M) (Figures <xref ref-type="fig" rid="F8">8A&#x02013;C</xref>; see also Figure <xref ref-type="supplementary-material" rid="SM1">S2</xref>).</p>
<fig id="F8" position="float">
<label>Figure 8</label>
<caption><p><bold>Expression of several genes and radial glial fibers in the chicken embryonic medial pallium at intermediate stages. (A&#x02013;H)</bold> Digital images of coronal sections of chicken embryonic telencephalon (E10&#x02013;E13), at rostral <bold>(A&#x02013;C)</bold>, intermediate <bold>(D&#x02013;F)</bold>, or caudal <bold>(G&#x02013;I)</bold> levels, hybridized for <italic>cLef1, cProx1</italic>, or <italic>cWnt8b</italic> (the latter is used to distinguish the roof plate and cortical hem) Note the strong expression of <italic>cLef1</italic> in the rostral APH, which extends caudally to a small area that occupies a superficial position above APHm. <italic>cProx1</italic> allows distinction of the dentate gyrus (DG). I: Detail of radial glial fibers in the APH (immunohistochemical staining using H5 antibody). Note that the caudal extension of APHr (ectopic APHr or APHre in <bold>G&#x02013;I</bold>) is avoided by fibers. For abbreviations see list. Scale bar: <bold>(A)</bold> &#x0003D; 200 &#x003BC;m (applies to <bold>A,B,D&#x02013;H</bold>); <bold>(C)</bold> &#x0003D; 1 mm, <bold>(I)</bold> &#x0003D; 200 &#x003BC;m.</p></caption>
<graphic xlink:href="fnana-08-00059-g0008.tif"/>
</fig>
<p><italic>cLhx2, cLhx9, cProx1, cLmo3</italic>, and <italic>cLmo4</italic> were also expressed in the mantle of the chicken medial pallium at E10&#x02013;E14, but showed differences between distinct subdivisions (Figures <xref ref-type="fig" rid="F8">8</xref>&#x02013;<bold>10</bold>; Table <xref ref-type="table" rid="T2">2B</xref>). In particular, <italic>cProx1</italic> was exclusively expressed in a large part of the so-called avian hippocampus, including a large part of the dorsal hippocampus or V-shaped area (dentate gyrus primordium and hippocampal sector 1 or Hi1 of Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>) and the so-called ventral hippocampus (Figures <xref ref-type="fig" rid="F8">8E,H</xref>; Table <xref ref-type="table" rid="T2">2B</xref>); this makes this chicken medial pallial subdivision comparable by position, embryonic origin, and molecular profile to the mouse dentate gyrus or DG, and we called it accordingly. On the other hand, <italic>cLmo4</italic> (Figures <xref ref-type="fig" rid="F9">9A&#x02013;C,H,K,N</xref>, <xref ref-type="fig" rid="F10">10G</xref>) and <italic>cLhx2</italic> (Figures <xref ref-type="fig" rid="F10">10B,C,E</xref>) were moderate to strongly expressed in the whole mantle of all subdivisions of the medial pallium, with the strongest signal levels observed in APHr, APHm, and APHi. In contrast, <italic>cLhx9</italic> and <italic>cLmo3</italic> expressions in the mantle were restricted to different subdivisions. Thus, <italic>cLhx9</italic> was expressed weakly in APHl and strongly in APHcl and entorhinal cortex (Figures <xref ref-type="fig" rid="F9">9D,E</xref>, <xref ref-type="fig" rid="F10">10D,F,H,I</xref>). <italic>cLmo3</italic> showed generally weak expression in DG, and the superficial layer of APHr, APHm, APHi, and APHl subdivisions (Figures <xref ref-type="fig" rid="F9">9F,G,I,J,L,M</xref>).</p>
<fig id="F9" position="float">
<label>Figure 9</label>
<caption><p><bold>Expression of several genes in the chicken embryonic telencephalon at intermediate stages.</bold> Digital images of coronal sections of chicken embryonic telencephalon (E12, E13), at rostral <bold>(A,F&#x02013;H)</bold>, intermediate <bold>(B&#x02013;D, I&#x02013;K)</bold> or caudal <bold>(E, L&#x02013;N)</bold> levels, hybridized for <italic>cLhx9, cLmo3</italic>, or <italic>cLmo4</italic>. Note the strong expression of <italic>cLmo4</italic> in medial pallial derivatives, which is remarkable in APHm and APHi. <italic>cLhx9</italic> is also expressed in the vz of the medial pallium, and at caudal levels the expression becomes stronger and is additionally present in the mantle. Moreover, <italic>cLhx9</italic> is expressed in derivatives of the ventral pallium (VP; in particular, the caudal nidopallium, <bold>N</bold>), and in both vz and derivatives of the ventrolateral caudal pallium (VLP, which gives rise to the arcopallium). For abbreviations see list. Scale bar: <bold>(A)</bold> &#x0003D; 1 mm (applies to <bold>A&#x02013;E</bold>); <bold>(F)</bold> &#x0003D; 1 mm (applies to <bold>F,I,L</bold>); <bold>(H)</bold> &#x0003D; 500 &#x003BC;m (applies to <bold>G,H,J,K,M,N</bold>).</p></caption>
<graphic xlink:href="fnana-08-00059-g0009.tif"/>
</fig>
<fig id="F10" position="float">
<label>Figure 10</label>
<caption><p><bold>Expression of several genes in the chicken embryonic telencephalon at intermediate stages. (A&#x02013;G)</bold> Digital images of coronal sections of chicken embryonic telencephalon (E14), at intermediate <bold>(A&#x02013;C)</bold> or caudal <bold>(D&#x02013;G)</bold> levels, hybridized for <italic>cLhx2, cLhx9</italic>, or <italic>cLmo4</italic>. <bold>(H&#x02013;J)</bold> Digital images of horizontal sections of chicken embryonic telencephalon (E14), from top <bold>(H)</bold> to bottom <bold>(J)</bold>, hybridized for <italic>cLhx9</italic>. Note the distinct genetic profile of DLP and VLP. For abbreviations see list. Scale bar: <bold>(A)</bold> &#x0003D; 1 mm (applies to all).</p></caption>
<graphic xlink:href="fnana-08-00059-g0010.tif"/>
</fig>
</sec>
<sec>
<title>E16&#x02013;E18 and hatchlings</title>
<p>While the expression of <italic>cLhx2</italic> remained moderate to strong in the vz and mantle of the whole medial pallium, <italic>cLef1</italic> and <italic>cLhx9</italic> were completely or almost completely downregulated in the medial pallial vz, and their expression became restricted to only parts of the mantle (Figure <xref ref-type="fig" rid="F11">11</xref>). <italic>cLhx9</italic> retained its expression in the mantle of APHl, APHcl, and entorhinal cortex (not shown here, but seen in Figures <xref ref-type="fig" rid="F5">5</xref>, <xref ref-type="fig" rid="F6">6</xref> in Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>). <italic>cLef1</italic> became downregulated in most medial pallial areas but retained a very strong expression in APHr and its ectopic extension (APHre), which was still visible at P2 (Figures <xref ref-type="fig" rid="F11">11H,I</xref>). On the other hand, <italic>cProx1</italic> retained its distinctive expression in DG at least until P2 (Figure <xref ref-type="fig" rid="F11">11J</xref>; Figure <xref ref-type="supplementary-material" rid="SM1">S2</xref>). Finally, the expression patterns of <italic>cLmo3</italic> and <italic>cLmo4</italic> in the chicken medial pallium during pre-hatching stages were similar to those seen before (E12&#x02013;E14). By E18, <italic>cLmo3</italic> expression was weak in DG and Ent, but moderate in parts of most APH subdivisions, except APHl, where it was strong (Figures <xref ref-type="fig" rid="F11">11A&#x02013;C</xref>). The expression pattern of <italic>cLmo3</italic> in DG and APH was still similar by P0. In APHi, <italic>cLmo3</italic> expression was located deep and superficial to the principal cell layer. However, in APHl and medial APHcl the expression was ample but left empty, free of expression, patches or islands of the cortical plate. By P0, <italic>cLmo3</italic> expression became moderate in the entorhinal cortex. On the other hand, at E16&#x02013;E18, the expression of <italic>cLmo4</italic> was moderate to very strong in all medial pallial subdivisions, being remarkable in parts of APH (Figures <xref ref-type="fig" rid="F11">11D&#x02013;F</xref>). By P0, <italic>cLmo4</italic> expression still was remarkably strong in APHm, APHi, and the ectopic part of APHr (Figure <xref ref-type="fig" rid="F11">11G</xref>). However, the expression became weak in DG.</p>
<fig id="F11" position="float">
<label>Figure 11</label>
<caption><p><bold>Expression of several genes in the chicken embryonic telencephalon at prehatching and early posthatching stages.</bold> Digital images of coronal sections of chicken telencephalon (E16, E18, P0, or P2), at intermediate <bold>(A,D,G,H)</bold> or caudal <bold>(B,C,E,F,I,J)</bold> levels, hybridized for <italic>cLmo3, cLmo4, cLef1</italic>, or <italic>cProx1</italic>. Note the expression of cProx1 in the dentate gyrus, which includes a large part of V-shaped area, but not its dorsal part (asterisk in <bold>J</bold>). This dorsal part of V-shaped area (hippocampal sector 2) is also free of <italic>cLmo3</italic> (asterisk in <bold>B,C</bold>) and may be comparable to CA3 of mammals. For abbreviations see list. Scale bar: <bold>(A)</bold> &#x0003D; 1 mm (applies to <bold>A&#x02013;I</bold>); <bold>(J)</bold> &#x0003D; 200 &#x003BC;m.</p></caption>
<graphic xlink:href="fnana-08-00059-g0011.tif"/>
</fig>
</sec>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<sec>
<title>Comparison of the hippocampal formation of mouse and chicken based on combinatorial gene expression patterns</title>
<p>In this study, we used the combinatorial expression patterns of seven developmental regulatory genes (<italic>Lef1, Lhx2, Lhx9, Lhx5, Lmo3, Lmo4</italic>, and <italic>Prox1</italic>), together with analysis of topological position and published data on these or other genes, to identify the medial pallial derivatives and define its major subdivisions in mouse and chicken, and to compare such subdivisions between both species. In both mouse and chicken, the medial pallium is defined as a pallial sector adjacent to the cortical hem (expressing <italic>cLhx5</italic> and <italic>cWn8b</italic>; Figures <xref ref-type="fig" rid="F6">6G</xref>, <xref ref-type="fig" rid="F8">8F</xref>) and roof plate/choroid tela (expressing <italic>cWnt8b</italic>, Figure <xref ref-type="fig" rid="F8">8F</xref>), showing moderate to strong vz expression of <italic>Lef1, Lhx2</italic>, and <italic>Lhx9</italic>, but not <italic>Lhx5</italic>, at least during early developmental stages. The topological position and the combination of genes at early developmental stages make the medial pallium different from other neighboring pallial sectors, such as the pallial septum (which additionally expresses <italic>Lhx5</italic>), the dorsal pallium (which does not express <italic>Lhx9</italic> in the vz, and is mostly devoid of <italic>Lef1</italic> except its medialmost, cingulate/retrosplenial areas), the dorsolateral caudal pallium (which does not express <italic>Lef1</italic> nor <italic>Lhx9</italic> in the vz), and the ventral/ventrolateral-caudal pallia (which do not express <italic>Lef1</italic> in the vz). Based on this gene combination, often also present in the mantle, we propose that the <italic>indusium griseum</italic>, the hippocampal formation (DG, CA fields, and subiculum), the medial entorhinal cortex, and part of the amygdalo-hippocampal transition area of mouse are medial pallial derivatives. It is likely that the presubiculum and parasubiculum also derive from the medial pallium (see these areas expressing <italic>Lhx2</italic> in Figure <xref ref-type="fig" rid="F5">5E</xref>&#x02033;), although our data were insufficient to clearly determine expression of <italic>Lef1</italic> in these areas. In the chicken, based on the same position and gene combination, we propose that the hippocampus (including the V-shaped area and the ventral hippocampus), the APH (including its caudolateral part, often called CDL; Reiner et al., <xref ref-type="bibr" rid="B100">2004</xref>; Atoji and Wild, <xref ref-type="bibr" rid="B13">2005</xref>), the entorhinal cortex, and the amygdalo-hippocampal transition area are medial pallial derivatives.</p>
<p>The genes <italic>Lhx2, Lhx9</italic>, and <italic>Lef1</italic> were previously described to be expressed in the developing hippocampal formation of mouse (<italic>Lhx2</italic>: Porter et al., <xref ref-type="bibr" rid="B92">1997</xref>; Bulchand et al., <xref ref-type="bibr" rid="B25">2001</xref>; Monuki et al., <xref ref-type="bibr" rid="B83">2001</xref>; Vyas et al., <xref ref-type="bibr" rid="B123">2003</xref>; <italic>Lhx9</italic>: R&#x000E9;taux et al., <xref ref-type="bibr" rid="B101">1999</xref>; Vyas et al., <xref ref-type="bibr" rid="B123">2003</xref>; Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>; <italic>Lef1</italic>: Galceran et al., <xref ref-type="bibr" rid="B41">2000</xref>; Choe et al., <xref ref-type="bibr" rid="B31">2013</xref>). Herein, we provide more details on their expression in other medial pallial derivatives, such as the <italic>indusium griseum</italic>, part of the amygdalo-hippocampal transition area and the medial entorhinal cortex. The common origin with other parts of the hippocampal formation may explain some of their similar features and connections (see discussion for the entorhinal cortex below).</p>
<p>The present study is the first one that uses the three genes in combination, in a comparative context and in a comprehensive way, for trying to identify the medial pallial derivatives in the chicken. There are previous, separate reports of expression of these genes in the developing medial pallium of chicken, but none of these showed enough detail (<italic>cLhx2</italic> and <italic>cLhx9</italic>: Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>; this study was centered in the ventral pallium; see also data of <italic>Lhx9</italic> in the zebra finch: Chen et al., <xref ref-type="bibr" rid="B30">2013</xref>) and/or signal quality (<italic>cLef1</italic>: Gupta et al., <xref ref-type="bibr" rid="B46">2012</xref>). Based on the combinatorial expression patterns presented here, the chicken medial pallium is larger than previously thought since it includes not only the hippocampus (including the V-shaped area and the ventral hippocampus) and medial parts of APH (our APHm, APHi, APHl; simply named APH in the proposal of the Avian Brain Nomenclature Forum; Reiner et al., <xref ref-type="bibr" rid="B100">2004</xref>), but also the caudolateral part of APH, the entorhinal cortex, and the amygdalo-hippocampal transition area. The caudolateral APH (APHcl, using the nomenclature of Redies et al., <xref ref-type="bibr" rid="B98">2001</xref>; Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>) is called the dorsolateral corticoid area by many authors (CDL; Reiner et al., <xref ref-type="bibr" rid="B100">2004</xref>; Atoji and Wild, <xref ref-type="bibr" rid="B13">2005</xref>). Its medial pallial origin possibly explains its three-layered cytoarchitecture similar to other APH areas (Redies et al., <xref ref-type="bibr" rid="B98">2001</xref>; Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>), and its extensive connections with other parts of the APH, as shown in pigeons (Atoji and Wild, <xref ref-type="bibr" rid="B13">2005</xref>). Based on its connections, Atoji and Wild (<xref ref-type="bibr" rid="B13">2005</xref>) proposed that the APHcl/CDL is comparable to the cingulate cortex of mammals, which primordium also expresses <italic>Lef1</italic> during development (present data). However, while the APHcl/CDL derives from the medial pallium (having vz expression of <italic>Lef1, Lhx2</italic>, and <italic>Lhx9</italic>), the cingulate cortex and other parts of the neocortex derive from the dorsal pallium (showing lack of expression of <italic>Lhx9</italic> at the vz), which disfavors the homology of these two structures. Our data support that APHcl/CDL is really a medial pallial derivative and, as such, part of the avian hippocampal complex; therefore, we recommend to call it simply APHcl and to abandon the term CDL, which is confusing because it is also employed by some authors to refer to the DLP (see, for example, Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>; Belgard et al., <xref ref-type="bibr" rid="B17">2013</xref>). In addition, we found a novel cell group, the APHr (maybe comparable to the apical APH of Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>), which could be distinguished by its intense expression of <italic>Lef1</italic> from E10 onwards. While <italic>Lef1</italic> started to be downregulated in most of the medial pallium, its expression was intensified in APHr during intermediate and late embryonic development, and was still seen defining this cell group after hatching (P2). As discussed later, an ectopic migrated part of APHr appears to reach intermediate and caudal hippocampal formation levels, where it appears to correspond to the so-called parvocellular region of Atoji and Wild (<xref ref-type="bibr" rid="B13">2005</xref>).</p>
<p>The present data agree with previous claims of homology of the avian hippocampus and APH with the hippocampal formation of mammals (reviews in Dubbeldam, <xref ref-type="bibr" rid="B36">1998</xref>; Reiner et al., <xref ref-type="bibr" rid="B100">2004</xref>; Striedter, <xref ref-type="bibr" rid="B112">2005</xref>; Atoji and Wild, <xref ref-type="bibr" rid="B14">2006</xref>; Papp et al., <xref ref-type="bibr" rid="B89">2007</xref>), which were based on identical topological position and embryological origin (Ariens-Kapper et al., <xref ref-type="bibr" rid="B11">1936</xref>; K&#x000E4;ll&#x000E9;n, <xref ref-type="bibr" rid="B56">1962</xref>; Redies et al., <xref ref-type="bibr" rid="B98">2001</xref>; Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>), and some similarities in cyto- and chemo-architecture (Erichsen et al., <xref ref-type="bibr" rid="B39">1991</xref>; Montagnese et al., <xref ref-type="bibr" rid="B81">1996</xref>; T&#x000F6;mb&#x000F6;l et al., <xref ref-type="bibr" rid="B118">2000</xref>; see also Herold et al., <xref ref-type="bibr" rid="B49">2014</xref>), connections (Benowitz and Karten, <xref ref-type="bibr" rid="B18">1976</xref>; Casini et al., <xref ref-type="bibr" rid="B28">1986</xref>; Sz&#x000E9;kely and Krebs, <xref ref-type="bibr" rid="B116">1996</xref>; Sz&#x000E9;kely, <xref ref-type="bibr" rid="B115">1999</xref>; Atoji et al., <xref ref-type="bibr" rid="B16">2002</xref>; Atoji and Wild, <xref ref-type="bibr" rid="B12">2004</xref>), and function (Bingman et al., <xref ref-type="bibr" rid="B19">1984</xref>, <xref ref-type="bibr" rid="B20">2003</xref>; Sherry et al., <xref ref-type="bibr" rid="B107">1992</xref>; Colombo and Broadbent, <xref ref-type="bibr" rid="B34">2000</xref>; Clayton et al., <xref ref-type="bibr" rid="B32">2003</xref>; Mayer et al., <xref ref-type="bibr" rid="B74">2013</xref>). Similarly to that of mammals, the avian hippocampal formation is involved in episodic and spatial memory, and contains location-specific and other types of cells involved in spatial navigation (Clayton et al., <xref ref-type="bibr" rid="B32">2003</xref>; Bingman and Sharp, <xref ref-type="bibr" rid="B21">2006</xref>). It also shows oscillatory activity similar to the theta rhythms (Siegel et al., <xref ref-type="bibr" rid="B109">2000</xref>), LTP and LTD synaptic plasticity involved in learning and memory, synaptic modification after training, and evidence of adult neurogenesis (reviewed by Papp et al., <xref ref-type="bibr" rid="B89">2007</xref>). Crucial for the argument of homology is that the hippocampal formation has also been identified in reptiles, and was likely present in the common ancestor of amniotes (reviewed by Rodr&#x000ED;guez et al., <xref ref-type="bibr" rid="B103">2002</xref>; Papp et al., <xref ref-type="bibr" rid="B89">2007</xref>; Medina and Abell&#x000E1;n, <xref ref-type="bibr" rid="B76">2009</xref>).</p>
<p>Our data also agree with more recent proposals of homology based on massive gene expression data in the adult pallium, which show a striking similarity of mouse and chicken medial pallial derivatives regarding their gene expression profile (for example, Belgard et al., <xref ref-type="bibr" rid="B17">2013</xref>). However, some recent studies have revealed that the hippocampal formation of different avian species also shows a genetic expression profile similar to that of the arcopallium during development (Chen et al., <xref ref-type="bibr" rid="B30">2013</xref>) and in the adult (Jarvis et al., <xref ref-type="bibr" rid="B54">2013</xref>). This particularly refers to the expression of the transcription factors Lhx9 and ER81. However, <italic>Lef1</italic>, which in mammals has been shown to be essential for the development of the hippocampal formation (see above), is expressed in the developing hippocampal formation of chicken (E8&#x02013;E9), but not in the arcopallium. After E10, <italic>Lef1</italic> also starts to be expressed in parts of the mantle of the chicken dorsal pallium (hyperpallium) and lateral pallium (mesopallium). It is important to remember that most developmental regulatory genes are expressed in more than one region; for example, this is so for <italic>Emx1, Emx2, Pax6, Lhx2, Lhx9</italic>, and <italic>ER81</italic>, expressed in several pallial subdivisions, but some also in the subpallium and outside the telencephalon, and even outside the nervous system (Puelles et al., <xref ref-type="bibr" rid="B95">2000</xref>; Abell&#x000E1;n and Medina, <xref ref-type="bibr" rid="B3">2009</xref>; Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>; Tzchori et al., <xref ref-type="bibr" rid="B119">2009</xref>; Chen et al., <xref ref-type="bibr" rid="B30">2013</xref>; present data). Their function is region, time, and context dependent. This also applies to Lef1, which is expressed in the brain and other tissues, in complex patterns that change throughout embryonic development and postnatally (present data; Oosterwegel et al., <xref ref-type="bibr" rid="B88">1993</xref>; Nagalski et al., <xref ref-type="bibr" rid="B84">2013</xref>), having roles that are context-dependent (Mao and Byers, <xref ref-type="bibr" rid="B72">2011</xref>). The context relies on the molecular networks present in the tissue, which change between regions and with time. The molecular network present in the tissue at any time is essential for understanding both the interactions between transcription factors or other regulatory proteins and their region- and time-specific function. For this reason, we pay special attention to both the topological position (Nieuwenhuys, <xref ref-type="bibr" rid="B85">1998</xref>, <xref ref-type="bibr" rid="B86">2009</xref>; Striedter, <xref ref-type="bibr" rid="B112">2005</xref>) and the combinatorial expression patterns of regulatory genes seen during early development (see also discussion in Puelles and Medina, <xref ref-type="bibr" rid="B97">2002</xref>; Puelles and Ferran, <xref ref-type="bibr" rid="B94">2012</xref>; Medina et al., <xref ref-type="bibr" rid="B76a">2013</xref>). Studies using knockout mice have shown that Lef1 is one of the key actors involved at early stages in the development of the hippocampal formation, but this transcription factor acts in combination with other regulatory proteins, such as Wnt and BMP proteins, produced at the cortical hem and/or roof plate (Galceran et al., <xref ref-type="bibr" rid="B41">2000</xref>; Choe et al., <xref ref-type="bibr" rid="B31">2013</xref>). How Lef1 interacts with Lhx2 (also essential for hippocampal development; Bulchand et al., <xref ref-type="bibr" rid="B25">2001</xref>; Vyas et al., <xref ref-type="bibr" rid="B123">2003</xref>), Lhx9, and ER81 during medial pallial development is unknown. The role of Lef1 in the development of other brain regions outside the medial pallium (such as the hyperpallium/dorsal pallium or the thalamus) is also unknown. Due to its far lateroventral position, the arcopallium appears to be out of the effect of roof plate/cortical hem BMP/Wnt signals (if existent, such effect is likely very weak; see also Medina and Abell&#x000E1;n, <xref ref-type="bibr" rid="B76">2009</xref>; Aboitiz and Zamorano, <xref ref-type="bibr" rid="B5">2013</xref>). A partially different network of transcription factors (without the implication of Lef1) is important for arcopallial development (such as Lhx9, ER81, and other), although the hierarchy, interactions and functions of the different factors within the network are still unknown.</p>
</sec>
<sec>
<title>Hippocampal formation subdivisions in mouse and chicken</title>
<p>The combinatorial expression of <italic>Lef1, Lhx2, Lhx9, Prox1, Lmo4</italic>, and <italic>Lmo3</italic> was useful for defining some molecular features of the major subdivisions of the hippocampal formation, and for comparative purposes. Below we discuss the evidence suggesting the comparison of specific chicken subdivisions with the mammallian DG/CA3 and the CA1/subiculum (Figure <xref ref-type="fig" rid="F12">12</xref>).</p>
<fig id="F12" position="float">
<label>Figure 12</label>
<caption><p><bold>Comparison of chicken and mouse medial pallial subdivisions.</bold> Schematic drawings of frontal sections through the telencephalon of a chicken (at E16) and a mouse (at E18.5), at rostral intermediate, or caudal levels, showing the major subdivisions of the medial pallium. A color code is used to compare these subdivisions between species. In these schemes, dorsal is to the top and medial is to the left. In the chicken, the rostralmost part is represented by the APHr. The asterisk points to an ectopic part of chicken APHr (possibly a group tangentially migrated cells), observed at the surface of APHm at intermediate and caudal levels of the medial pallium. The rostralmost part of mouse is not represented here, but appears to include the indusium griseum. For abbreviations see list. See text for more details.</p></caption>
<graphic xlink:href="fnana-08-00059-g0012.tif"/>
</fig>
<sec>
<title>Dentate gyrus and CA3</title>
<p>The mouse DG, occupying the medialmost topological position within the medial pallium, typically showed moderate to strong expression of <italic>Lef1, Lhx2, Lhx9</italic>, and <italic>Prox1</italic>. Of these, <italic>Lef1</italic> and <italic>Prox1</italic> have been shown to be of crucial importance. Lack of Lef1 function in mouse leads to agenesis of the DG (Galceran et al., <xref ref-type="bibr" rid="B41">2000</xref>), while conditional inactivation of Prox1 in mouse showed that this transcription factor is essential for specification and maturation of DG granule cells, and maintenance of their cell identity throughout life (Lavado et al., <xref ref-type="bibr" rid="B64">2010</xref>; Karalay et al., <xref ref-type="bibr" rid="B57">2011</xref>; Iwano et al., <xref ref-type="bibr" rid="B52">2012</xref>). In the DG of adult mice, <italic>Prox1</italic> is also involved in intermediate progenitor maintenance and maturation of new granule cells (Lavado et al., <xref ref-type="bibr" rid="B64">2010</xref>; Karalay et al., <xref ref-type="bibr" rid="B57">2011</xref>).</p>
<p>In contrasts, there is much controversy on the location or existence of a DG in birds and reptiles. Based on different data, there are diverse opinions on possible areas homologous to DG in birds: V-shaped area or part of it, vs. part of APH (for example, Montagnese et al., <xref ref-type="bibr" rid="B81">1996</xref>; Sz&#x000E9;kely, <xref ref-type="bibr" rid="B115">1999</xref>; Atoji et al., <xref ref-type="bibr" rid="B16">2002</xref>; Atoji and Wild, <xref ref-type="bibr" rid="B12">2004</xref>; Su&#x000E1;rez et al., <xref ref-type="bibr" rid="B113">2006</xref>; Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>; Herold et al., <xref ref-type="bibr" rid="B49">2014</xref>). Moreover, some authors claim that DG may be a novel acquisition of mammals (Papp et al., <xref ref-type="bibr" rid="B89">2007</xref>), which would imply that there is no homolog in birds. However, our data on <italic>Lef1</italic> and <italic>Prox1</italic> strongly suggest that a large part of the so-called avian hippocampus, including its dorsal (the part of V-shaped area encompassing the dentate gyrus primordium and hippocampal sector 1 of Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>) and ventral parts (Atoji et al., <xref ref-type="bibr" rid="B16">2002</xref>), could be homologous to mammalian DG, if confirmed its presence in reptiles. Gupta et al. (<xref ref-type="bibr" rid="B46">2012</xref>) reached a similar conclusion based on <italic>Prox1</italic> in V-shaped area during early/intermediate development (E8&#x02013;E14), although these authors included the whole V-shaped area and did not mention the ventral hippocampus. Our data show that the dorsalmost part of V-shaped area (hippocampal sector 2 or Hi2 of Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>; Table <xref ref-type="table" rid="T2">2B</xref>) does not express <italic>Prox1</italic> at E10&#x02013;E12 or later (Figures <xref ref-type="fig" rid="F8">8H</xref>, <xref ref-type="fig" rid="F11">11J</xref>), raising doubts on the homology of this dorsal part. Gupta et al. (<xref ref-type="bibr" rid="B46">2012</xref>) showed that chicken DG cells are born between E6 (the majority) and E10 from the vz deep to the V-shaped area, and start to express Prox1 4 days later (from E8 on). Our data show that <italic>Prox1</italic> continues to be expressed in chicken DG after hatching (at least until P2), but <italic>Lef1</italic> is downregulated, similarly to the findings in mouse (Nagalski et al., <xref ref-type="bibr" rid="B84">2013</xref>).</p>
<p>Regarding CA3, in mouse this area shares some features with DG, such as lack of <italic>Lmo3</italic> expression (see Table <xref ref-type="table" rid="T1">1B</xref>), but it does not express <italic>Prox1</italic>. In chicken, the dorsal part of V-shaped area, with no expression of <italic>Prox1</italic>, does not express <italic>Lmo3</italic> either, and may be comparable to CA3 (asterisks in Figures <xref ref-type="fig" rid="F11">11B,C</xref>). Curiously, following postmitotic inactivation of <italic>Prox1</italic> in mouse, immature neurons of DG lose their granule cell identity and differentiate into CA3 pyramidal neurons (Iwano et al., <xref ref-type="bibr" rid="B52">2012</xref>). This means that DG immature neurons have the potential of becoming either granule cells or CA3 pyramidal cells. Moreover, recent data have shown that, in rats, CA3 field includes a subpopulation of granule cells, which contain calbindin and Prox1 as those of DG (Szabadics et al., <xref ref-type="bibr" rid="B114">2010</xref>). These interesting observations have implications for understanding hippocampal evolution, since perhaps both DG and CA3 evolved from a common field, which splits into two separate fields either by downregulation of <italic>Prox1</italic> in one part (the CA3) or by novel expression of <italic>Prox1</italic> in one of the parts (the DG). To know what was the ancestral situation in amniotes, it is mandatory to study <italic>Lef1</italic> and <italic>Prox1</italic> in different reptiles, including lizards and other Squamates, which are currently considered a sister group of Archosauria (birds, crocodiles and perhaps turtles) and, as such, excellent models for understanding the basal condition in sauropsids (Zardoya and Meyer, <xref ref-type="bibr" rid="B129">1998</xref>; Meyer and Zardoya, <xref ref-type="bibr" rid="B80">2003</xref>; Fong et al., <xref ref-type="bibr" rid="B40">2012</xref>). Comparison of the chicken, crocodile, and lizard hippocampal formation (Nissl images in Papp et al., <xref ref-type="bibr" rid="B89">2007</xref>, for lizard and crocodile; Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>, for chicken) points to the striking topological and cytoarchitectonic similarity of the chicken ventral hippocampus and the lizard/crocodile medial cortex, and the chicken V-shaped area (especially its dorsal part) to the lizard/crocodile dorsomedial cortex. Although some authors have suggested that the reptilian medial cortex is comparable to mammalian DG and the reptilian dorsomedial cortex is comparable to CA3 (Mart&#x000ED;nez-Guijarro et al., <xref ref-type="bibr" rid="B73">1990</xref>), other authors suggested that the reptilian medial cortex is comparable to the mammalian <italic>indusium griseum</italic> (K&#x000FC;nzle, <xref ref-type="bibr" rid="B63">2004</xref>), or that both reptilian cortices maybe like mammalian CA3 (Papp et al., <xref ref-type="bibr" rid="B89">2007</xref>). The possible common origin of DG and CA3 may explain why the connections of the avian V-shaped area and the reptilian medial/dorsomedial cortices are a mixture of those of mammalian DG and CA3 [reciprocal connections with the septum, and both ipsi- and contralateral (commissural) projections to other parts of the hippocampal formation; birds: (Casini et al., <xref ref-type="bibr" rid="B28">1986</xref>; Atoji and Wild, <xref ref-type="bibr" rid="B12">2004</xref>; Montagnese et al., <xref ref-type="bibr" rid="B82">2004</xref>); for mammals see (Witter and Amaral, <xref ref-type="bibr" rid="B127">2004</xref>); reptiles: (Lopez-Garcia and Martinez-Guijarro, <xref ref-type="bibr" rid="B70">1988</xref>; Olucha et al., <xref ref-type="bibr" rid="B87">1988</xref>; Mart&#x000ED;nez-Guijarro et al., <xref ref-type="bibr" rid="B73">1990</xref>; Hoogland and Vermeulen-VanderZee, <xref ref-type="bibr" rid="B51">1993</xref>)]. In any case, it is clear that the avian hippocampal formation has undergone partial divergence during the hundreds of millions of years of separate evolution (Striedter, <xref ref-type="bibr" rid="B112">2005</xref>), which explains why some of the hippocampal subdivisions and features found in extant birds do not really fit well with any of those found in reptiles or mammals (see also Papp et al., <xref ref-type="bibr" rid="B89">2007</xref>; Herold et al., <xref ref-type="bibr" rid="B49">2014</xref>).</p>
<p>In addition to its role in DG granule cell specification, differentiation, and survival (reviewed by Karalay and Jessberger, <xref ref-type="bibr" rid="B58">2011</xref>), recent data in mouse showed that, from late embryonic stages, <italic>Prox1</italic> is also expressed in subsets of neocortical and hippocampal interneurons, which derive from the caudolateral ganglionic eminence and the preoptic area of the subpallium (Rubin and Kessaris, <xref ref-type="bibr" rid="B105">2013</xref>). However, our data in chicken did not allow to discriminate the presence of <italic>Prox1</italic>-expressing interneurons.</p>
</sec>
<sec>
<title>CA1 and subiculum</title>
<p>During early (chicken) and/or intermediate (mouse and chicken) development, in addition to <italic>Lef1</italic> and <italic>Lhx2</italic>, most medial pallial derivatives also show moderate to strong expression of <italic>Lmo4</italic>, while some of them (including CA1 and subiculum) also show <italic>Lmo3</italic> expression in an area- and layer-specific way. In the mouse, the strongest expression of <italic>Lmo4</italic> occurs in the CA1, while the strongest expression of <italic>Lmo3</italic> is seen in the subiculum. In the chicken, the strongest <italic>Lmo4</italic> expression is seen in APHm and APHi [roughly corresponding to the dorsomedial APH sector (DM) of Atoji and Wild, <xref ref-type="bibr" rid="B12">2004</xref>], while the strongest <italic>Lmo3</italic> expression is seen in APHl [corresponding to the dorsolateral APH sector (DL) of Atoji and Wild, <xref ref-type="bibr" rid="B12">2004</xref>; for comparison see Su&#x000E1;rez et al., <xref ref-type="bibr" rid="B113">2006</xref>]. These subdivisions show associational connections with other hippocampal areas, as well as descending projections to the septum, the nucleus accumbens, the pallial amygdala, the extended amygdala, and the hypothalamus, including the mammillary region (Atoji et al., <xref ref-type="bibr" rid="B16">2002</xref>, <xref ref-type="bibr" rid="B11a">2006</xref>; Atoji and Wild, <xref ref-type="bibr" rid="B12">2004</xref>, <xref ref-type="bibr" rid="B13">2005</xref>). Importantly, the APHm,i,l (DM and DL fields) are extensively and reciprocally connected with the DG/CA3 area (V-shaped area) (Atoji et al., <xref ref-type="bibr" rid="B16">2002</xref>), thus establishing the basis for the recurrent, associational architecture typical of the hippocampal formation in mammals, and needed for memory acquisition (Papp et al., <xref ref-type="bibr" rid="B89">2007</xref>). Based on their topological position, embryonic origin, genetic profile, and connectivity patterns, these APH subdivisions together appear comparable to the CA1/subiculum of mammals (see also Atoji and Wild, <xref ref-type="bibr" rid="B12">2004</xref>; Su&#x000E1;rez et al., <xref ref-type="bibr" rid="B113">2006</xref>).</p>
</sec>
</sec>
<sec>
<title>Radial vs. tangential cell migrations within the medial pallium: the cases of the APHr and DG</title>
<p>Data in chicken and in different mammalian species show that the majority of the neurons of the hippocampal formation migrate radially (following radial glial fibers) from the medial pallium neuroepithelium (mammals: Eckenhoff and Rakic, <xref ref-type="bibr" rid="B37">1984</xref>; Rickmann et al., <xref ref-type="bibr" rid="B102">1987</xref>; Altman and Bayer, <xref ref-type="bibr" rid="B7">1990a</xref>,<xref ref-type="bibr" rid="B8">b</xref>; Li and Pleasure, <xref ref-type="bibr" rid="B68">2005</xref>; chicken, Gupta et al., <xref ref-type="bibr" rid="B46">2012</xref>). The exception to this rule is the case of the GABAergic interneurons that populate the hippocampal formation, which migrate from the subpallium (Pleasure et al., <xref ref-type="bibr" rid="B91">2000</xref>; Cobos et al., <xref ref-type="bibr" rid="B33">2001</xref>). In addition, in chicken a part of the cells of APHr (the ectopic APHr or APHre) appears to migrate tangentially within the medial pallium to occupy more caudal, dorsomedial, and superficial positions (present results). Based on <italic>Lef1</italic> expression and radial glial fiber disposition, the APHr vz appears to be located at very rostral APH levels (maybe corresponding to the apical APH of Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>), where <italic>Lef1</italic> occupies the whole mantle (Figure <xref ref-type="fig" rid="F8">8C</xref>; Figure <xref ref-type="supplementary-material" rid="SM1">S2A</xref>). A band of <italic>Lef1</italic>-expressing cells (the APHre) appears to extend from this origin, and progressively occupies more superficial, dorsolateral and caudal positions. At intermediate and caudal levels, the <italic>Lef1</italic> expression domain related to APHre lies at the surface of APHm (Figures <xref ref-type="fig" rid="F8">8D</xref>, <xref ref-type="fig" rid="F9">9J</xref>, <xref ref-type="fig" rid="F11">11G</xref>) and appears to correspond to the so-called parvocellular region of the hippocampal formation (Atoji and Wild, <xref ref-type="bibr" rid="B13">2005</xref>). Thus, this observation suggests that the neurons of the parvocellular region arrive at their final destination by tangential migration. Supporting this proposal, this region is avoided by radial glial fibers that produce the underlying APHm (Figure <xref ref-type="fig" rid="F8">8I</xref>). The relation of APHr/APHre to other hippocampal subdivisions of chicken or other amniotes and the function of this cell group remain unknown.</p>
<p>In mammals, the DG granule neurons follow a special type of radial migration due to deformation of the radial glial fibers at the medialmost pallial edge, during the pallial growth that occurs in later developmental stages (Eckenhoff and Rakic, <xref ref-type="bibr" rid="B37">1984</xref>; Rickmann et al., <xref ref-type="bibr" rid="B102">1987</xref>; Li and Pleasure, <xref ref-type="bibr" rid="B68">2005</xref>; note that some authors do not consider this migration to be radial: Altman and Bayer, <xref ref-type="bibr" rid="B7">1990a</xref>). Such deformation of the radial glial fibers is not visible in the medial pallium of chicken (Gupta et al., <xref ref-type="bibr" rid="B46">2012</xref>; present results of radial glial fibers), possibly because it does not grow as much as in mammals.</p>
</sec>
<sec>
<title>Entorhinal cortex: two divisions, two embryonic origins</title>
<p>Our data in mouse suggest that the two major divisions described in the entorhinal cortex of different mammals originate in separate pallial domains, the MEnt (caudomedially located) from the medial pallium, and the LEnt (rostrolaterally located) from the dorsolateral caudal pallium (Figure <xref ref-type="fig" rid="F12">12</xref>). In particular, based on the combinatorial expression of <italic>Lef1, Lhx2, Lhx9</italic>, and <italic>Lmo4</italic>, the MEnt appears to derive from the same embryonic domain that produces the hippocampal formation. This may explain some of the distinct features found in MEnt (but not LEnt) (Sewards and Sewards, <xref ref-type="bibr" rid="B106">2003</xref>), such as the presence of cells involved in processing spatial cues (grid cells, head-direction cells, and border cells, which respond to specific position, direction and orientation, and are able to precisely map the spatial environment), and its implication in transmitting information on the spatial context of an experience to the hippocampal formation (Leutgeb et al., <xref ref-type="bibr" rid="B67">2005</xref>; Knierim et al., <xref ref-type="bibr" rid="B60">2013</xref>; Zhang et al., <xref ref-type="bibr" rid="B130">2013</xref>). Moreover, lesion experiments have shown that MEnt (but not LEnt) is involved in spatial learning (Sewards and Sewards, <xref ref-type="bibr" rid="B106">2003</xref>). In contrast, LEnt transmits non-spatial information to the hippocampal formation, related to the content of an experience, and is involved in non-spatial learning and memory retrieval (Knierim et al., <xref ref-type="bibr" rid="B60">2013</xref>; Stouffer and Klein, <xref ref-type="bibr" rid="B111">2013</xref>; Tanninen et al., <xref ref-type="bibr" rid="B117">2013</xref>). While the MEnt receives input from the CA1, subiculum, presubiculum/parasubiculum (all of which also contain place or grid cells; Boccara et al., <xref ref-type="bibr" rid="B24">2010</xref>), and from visual neocortical areas related to the dorsal visual stream (the &#x0201C;where&#x0201D; pathway) involved in processing spatial visual information on object location (Wang et al., <xref ref-type="bibr" rid="B124">2011</xref>), the LEnt receives input from visual areas of the temporo-occipital neocortex and/or perirhinal cortex (including area 35) related to the ventral visual stream (the &#x0201C;what&#x0201D; pathway), involved in object identification and recognition (Sewards and Sewards, <xref ref-type="bibr" rid="B106">2003</xref>; Canto et al., <xref ref-type="bibr" rid="B27">2008</xref>; Wang et al., <xref ref-type="bibr" rid="B124">2011</xref>). In both rodents and cats, both the LEnt and MEnt receive direct olfactory bulb input, although the LEnt is the preferential target (Room et al., <xref ref-type="bibr" rid="B104">1984</xref>; Witter and Amaral, <xref ref-type="bibr" rid="B127">2004</xref>). In rodents, LEnt shows important reciprocal connections with the pallial amygdala and possibly provides the amygdala with complex &#x0201C;contextual&#x0201D; information relevant for behavior (McDonald and Mascagni, <xref ref-type="bibr" rid="B75">1997</xref>), but the involvement of MEnt in such connections is very modest (Sewards and Sewards, <xref ref-type="bibr" rid="B106">2003</xref>). Both MEnt and LEnt receive weak auditory input from the temporal neocortex, and are reciprocally connected with areas of the cingulate, retrosplenial, and frontal neocortex (Sewards and Sewards, <xref ref-type="bibr" rid="B106">2003</xref>; Witter and Amaral, <xref ref-type="bibr" rid="B127">2004</xref>).</p>
<p>Are these two entorhinal cortex divisions present in birds? Current data suggest that the so-called entorhinal cortex of birds (Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>; Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>; present work) may be comparable to mammalian MEnt (Figure <xref ref-type="fig" rid="F12">12</xref>). This cortical area, located laterally to the APHcl/CDL, receives olfactory input (Reiner and Karten, <xref ref-type="bibr" rid="B99">1985</xref>; Atoji and Wild, <xref ref-type="bibr" rid="B15">2014</xref>), and has often been considered a caudal continuation of the piriform cortex (for example, Atoji and Wild, <xref ref-type="bibr" rid="B15">2014</xref>). However, in both mouse and chicken, the piriform cortex shows a genetic profile different from that of this avian cortical field: the piriform cortex is characterized by strong expression of <italic>Lmo3, Lmo4</italic>, and <italic>Cdh10</italic>, very weak expression of <italic>Lhx9</italic>, and no expression of <italic>Lhx2</italic> and <italic>Lef1</italic>; in contrast, the avian entorhinal cortex shows moderate to strong expression of <italic>Lmo4, Lhx9, Lhx2</italic>, and <italic>Lef1</italic>, while its cortical plate is nearly free of <italic>Lmo3</italic> and <italic>Cdh10</italic> (Vyas et al., <xref ref-type="bibr" rid="B123">2003</xref>; Abell&#x000E1;n et al., <xref ref-type="bibr" rid="B2">2009</xref>; present data). Also, while the piriform cortex is at the surface of the nidopallium and derives from the ventral pallium (Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>), the so-called avian entorhinal cortex is adjacent to the APH and lateral horn of the lateral ventricle, and appears to derive from the medial pallium (based on position and expression of <italic>Lef1</italic> during early development). Based on its embryonic origin, the so-called avian entorhinal cortex may be comparable to mammalian MEnt. As noted above, MEnt also receives a minor direct input from the olfactory bulb at least in some mammals (Room et al., <xref ref-type="bibr" rid="B104">1984</xref>; Witter and Amaral, <xref ref-type="bibr" rid="B127">2004</xref>).</p>
<p>In addition, the avian APHcl/CDL may also be comparable to mammalian MEnt (Figure <xref ref-type="fig" rid="F12">12</xref>). In pigeon, the APHcl/CDL is reciprocally and extensively connected with the various areas of the hippocampal formation, i.e., DG/CA3 area, APHm, APHi, and APHl (V-shaped area, DM and DL in Atoji and Wild, <xref ref-type="bibr" rid="B13">2005</xref>). Moreover, large lesions involving the CDL produce visuospatial deficits suggesting a similar role to that of mammalian MEnt, although this needs confirmation by smaller lesions or specific inactivation of APHcl/CDL (discussion in Atoji and Wild, <xref ref-type="bibr" rid="B13">2005</xref>). The observed deficits are consistent with the inputs to APHcl/CDL from the visual hyperpallium (Figure 5 of Atoji and Wild, <xref ref-type="bibr" rid="B13">2005</xref>), which has been involved in the &#x0201C;where&#x0201D; analysis of the information (Watanabe et al., <xref ref-type="bibr" rid="B125">2011</xref>). Moreover, the lateral part of APHcl/CDL also receives direct input from the olfactory bulb (Reiner and Karten, <xref ref-type="bibr" rid="B99">1985</xref>; Atoji and Wild, <xref ref-type="bibr" rid="B15">2014</xref>), and for this reason it has been compared to the entorhinal cortex of mammals (Redies et al., <xref ref-type="bibr" rid="B98">2001</xref>; Su&#x000E1;rez et al., <xref ref-type="bibr" rid="B113">2006</xref>). Curiously, both the avian APHcl/CDL and the mammalian MEnt include cell aggregates or patches showing neurochemical features different from the surrounding area (birds: Redies et al., <xref ref-type="bibr" rid="B98">2001</xref>; Kovjanic and Redies, <xref ref-type="bibr" rid="B61">2003</xref>; Su&#x000E1;rez et al., <xref ref-type="bibr" rid="B113">2006</xref>; mammals: Witter and Amaral, <xref ref-type="bibr" rid="B127">2004</xref>). These patches were also evident in our chicken material at P0 as areas of the cortical plate free of <italic>cLmo3</italic> expression. They appear to be formed by cells having the same embryonic birth date and expressing the same types of cell adhesion-mediating cadherins (Redies et al., <xref ref-type="bibr" rid="B98">2001</xref>; Kovjanic and Redies, <xref ref-type="bibr" rid="B61">2003</xref>; discussed by Su&#x000E1;rez et al., <xref ref-type="bibr" rid="B113">2006</xref>). The connections and functional significance of these patches remain unknown.</p>
<p>On the other hand, it is uncertain whether the avian field called dorsolateral caudal pallium (DLP) is or is not comparable to the dorsolateral caudal pallial field that produces LEnt in mammals, even if they occupy similar topological positions and share some similar molecular features (for example, in general weak or moderate expression of <italic>Lhx2, Lhx9, Lmo3</italic>, and <italic>Lmo4</italic>; present data; Figure <xref ref-type="fig" rid="F12">12</xref>). The avian DLP is relatively large, and has a cortical-like area at its surface that extends ventrally (Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>; called caudodorsolateral pallium or CDL by these authors), but apparently does not receive any direct olfactory input (Atoji and Wild, <xref ref-type="bibr" rid="B15">2014</xref>; called temporo-occipito-mesencephalic area or TPO by these authors). This general field receives different types of information from several pallial areas, including the entopallial belt (involved in the what analysis of the information, Watanabe et al., <xref ref-type="bibr" rid="B125">2011</xref>) and the mesopallium (Figure 9 of Atoji and Wild, <xref ref-type="bibr" rid="B13">2005</xref>), and it projects to the avian pallial amygdala (in particular, the caudolateral nidopallium and the arcopallium) and the basal ganglia (Veenman et al., <xref ref-type="bibr" rid="B121">1995</xref>; Kr&#x000F6;ner and G&#x000FC;nt&#x000FC;rk&#x000FC;n, <xref ref-type="bibr" rid="B62">1999</xref>). It is also connected reciprocally with the hippocampal formation, but less so than the APHcl/CDL (Atoji and Wild, <xref ref-type="bibr" rid="B13">2005</xref>). It would be interesting to investigate whether there is a structure comparable to avian DLP in reptiles, which would contribute to understand its homology across amniotes. For this purpose, it is necessary to have a molecular marker (or a clear combination of them) specific of this pallial sector.</p>
</sec>
<sec>
<title>Conflict of interest statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p></sec>
</sec>
</body>
<back>
<ack>
<p>The authors thank Dr. Luis Puelles (Univ. of Murcia, Spain) and the reviewers for their useful comments on the manuscript. Supported by a grant to Loreta Medina from the Spanish Ministry of Economy and Competitivity (MINECO) and Fondo Europeo de Desarrollo Regional (FEDER): grant no. BFU2012-33029.</p>
</ack>
<sec sec-type="supplementary-material" id="s5">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="http://www.frontiersin.org/journal/10.3389/fnana.2014.00059/abstract">http://www.frontiersin.org/journal/10.3389/fnana.2014.00059/abstract</ext-link></p>
<p>We provide two supplementary figures with additional details in the expression of Lef1 and Prox1 in the mouse and chicken forebrain.</p>
<supplementary-material xlink:href="DataSheet1.PDF" id="SM1" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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<glossary>
<def-list>
<title>Abbreviations</title>
<def-item><term>A</term>
<def><p>arcopallium (part of pallial amygdala; VLP derivative) (chicken)</p></def></def-item>
<def-item><term>ac</term>
<def><p>anterior commissure</p></def></def-item>
<def-item><term>Amyg</term>
<def><p>amygdala</p></def></def-item>
<def-item><term>AHi</term>
<def><p>amygdalo-hippocampal transition area</p></def></def-item>
<def-item><term>AHitr</term>
<def><p>amygdalo-hippocampal transition area (chicken)</p></def></def-item>
<def-item><term>APH</term>
<def><p>parahippocampal area (chicken)</p></def></def-item>
<def-item><term>APHcl</term>
<def><p>caudolateral APH (same as CDL)</p></def></def-item>
<def-item><term>APHi</term>
<def><p>intermediate APH</p></def></def-item>
<def-item><term>APHl</term>
<def><p>lateral APH</p></def></def-item>
<def-item><term>APHm</term>
<def><p>medial APH</p></def></def-item>
<def-item><term>APHr</term>
<def><p>rostral APH</p></def></def-item>
<def-item><term>APHre</term>
<def><p>ectopic part of APHr</p></def></def-item>
<def-item><term>APir</term>
<def><p>amygdalo-piriform transition area</p></def></def-item>
<def-item><term>BC</term>
<def><p>basal amygdalar complex (part of pallial amygdala)</p></def></def-item>
<def-item><term>CA</term>
<def><p>Ammon&#x00027;s horn fields (CA1, CA2, CA3)</p></def></def-item>
<def-item><term>can</term>
<def><p>CA neuroepithelium</p></def></def-item>
<def-item><term>cc</term>
<def><p>corpus callosum</p></def></def-item>
<def-item><term>CDL</term>
<def><p>corticoid dorsolateral area (same as APHcl) (chicken)</p></def></def-item>
<def-item><term>chp</term>
<def><p>choroid plexus</p></def></def-item>
<def-item><term>Cg</term>
<def><p>cingulate neocortex</p></def></def-item>
<def-item><term>cMEnt</term>
<def><p>caudal part of MEnt</p></def></def-item>
<def-item><term>CPu</term>
<def><p>caudoputamen</p></def></def-item>
<def-item><term>CR</term>
<def><p>Cajal-Retzius cells</p></def></def-item>
<def-item><term>cxh</term>
<def><p>cortical hem</p></def></def-item>
<def-item><term>DG</term>
<def><p>dentate gyrus</p></def></def-item>
<def-item><term>dgm</term>
<def><p>dentate gyrus migratory cells</p></def></def-item>
<def-item><term>dgn</term>
<def><p>DG neuroepitleium</p></def></def-item>
<def-item><term>DLP</term>
<def><p>dorsolateral caudal pallium</p></def></def-item>
<def-item><term>DLPco</term>
<def><p>dorsolateral caudal pallium, core nucleus (chicken)</p></def></def-item>
<def-item><term>DMH</term>
<def><p>dorsomedial hypothalamus</p></def></def-item>
<def-item><term>DP</term>
<def><p>dorsal pallium</p></def></def-item>
<def-item><term>EMT</term>
<def><p>prethalamic eminence</p></def></def-item>
<def-item><term>Ent</term>
<def><p>entorhinal cortex</p></def></def-item>
<def-item><term>GP</term>
<def><p>globus pallidus</p></def></def-item>
<def-item><term>H</term>
<def><p>hyperpallium (DP derivative) (chicken)</p></def></def-item>
<def-item><term>Hb</term>
<def><p>habenula</p></def></def-item>
<def-item><term>Hi2</term>
<def><p>hippocampal area 2 (dorsal part of V-shaped area; defined by Puelles et al., <xref ref-type="bibr" rid="B96">2007</xref>)</p></def></def-item>
<def-item><term>ic</term>
<def><p>internal capsule</p></def></def-item>
<def-item><term>IG</term>
<def><p><italic>indusium griseum</italic></p></def></def-item>
<def-item><term>Ins</term>
<def><p>insular cortex</p></def></def-item>
<def-item><term>iz</term>
<def><p>intermediate zone (deepest part of the mantle, containing migratory cells)</p></def></def-item>
<def-item><term>LEnt</term>
<def><p>lateral entorhinal cortex</p></def></def-item>
<def-item><term>lfb</term>
<def><p>lateral forebrain bundle</p></def></def-item>
<def-item><term>LGE</term>
<def><p>lateral ganglionic eminence</p></def></def-item>
<def-item><term>LP</term>
<def><p>lateral pallium</p></def></def-item>
<def-item><term>LS</term>
<def><p>lateral septum</p></def></def-item>
<def-item><term>LSt</term>
<def><p>lateral striatum (chicken)</p></def></def-item>
<def-item><term>m</term>
<def><p>mantle</p></def></def-item>
<def-item><term>m<sup>d</sup></term>
<def><p>deep part of the mantle</p></def></def-item>
<def-item><term>M</term>
<def><p>mesopallium (LP derivative) (chicken)</p></def></def-item>
<def-item><term>Me</term>
<def><p>medial amygdala</p></def></def-item>
<def-item><term>mes</term>
<def><p>mesoderm</p></def></def-item>
<def-item><term>MEnt</term>
<def><p>medial entorhinal cortex</p></def></def-item>
<def-item><term>MGE</term>
<def><p>medial ganglionic eminence</p></def></def-item>
<def-item><term>MP</term>
<def><p>medial pallium</p></def></def-item>
<def-item><term>N</term>
<def><p>nidopallium (VP derivative) (chicken)</p></def></def-item>
<def-item><term>NCL</term>
<def><p>caudolateral nidopallium</p></def></def-item>
<def-item><term>NCx</term>
<def><p>neocortex</p></def></def-item>
<def-item><term>o</term>
<def><p>outer or marginal zone</p></def></def-item>
<def-item><term>OB</term>
<def><p>olfactory bulb</p></def></def-item>
<def-item><term>Olf</term>
<def><p>olfactory areas</p></def></def-item>
<def-item><term>Pir</term>
<def><p>piriform cortex</p></def></def-item>
<def-item><term>PMCo</term>
<def><p>posteromedial cortical amygdalar area (part of pallial amygdala)</p></def></def-item>
<def-item><term>PO</term>
<def><p>preoptic area</p></def></def-item>
<def-item><term>PSe</term>
<def><p>pallial septum</p></def></def-item>
<def-item><term>RB</term>
<def><p>retrobulbar area</p></def></def-item>
<def-item><term>rp</term>
<def><p>roof plate</p></def></def-item>
<def-item><term>RS</term>
<def><p>retrosplenial neocortex</p></def></def-item>
<def-item><term>S</term>
<def><p>subiculum</p></def></def-item>
<def-item><term>Se</term>
<def><p>septum</p></def></def-item>
<def-item><term>sn</term>
<def><p>subiculum neuroepithelium</p></def></def-item>
<def-item><term>Sp</term>
<def><p>subpallium</p></def></def-item>
<def-item><term>St</term>
<def><p>striatum</p></def></def-item>
<def-item><term>svz</term>
<def><p>subventricular zone</p></def></def-item>
<def-item><term>tch</term>
<def><p>choroid tela</p></def></def-item>
<def-item><term>Te</term>
<def><p>temporal neocortex</p></def></def-item>
<def-item><term>Th</term>
<def><p>thalamus</p></def></def-item>
<def-item><term>v</term>
<def><p>ventricle</p></def></def-item>
<def-item><term>V</term>
<def><p>V-shaped area (chicken)</p></def></def-item>
<def-item><term>VLP</term>
<def><p>ventrolateral caudal pallium</p></def></def-item>
<def-item><term>VP</term>
<def><p>ventral pallium</p></def></def-item>
<def-item><term>vz</term>
<def><p>ventricular zone.</p></def></def-item>
</def-list>
</glossary>
</back>
</article>
