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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Public Health</journal-id>
<journal-title>Frontiers in Public Health</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Public Health</abbrev-journal-title>
<issn pub-type="epub">2296-2565</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fpubh.2021.736532</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Public Health</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Characterization of National Immunization Programs in the Context of Public Health Emergencies: A Case Study of 13 Countries in the WHO Africa Region</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Chepkurui</surname> <given-names>Viola</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1384206/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Amponsah-Dacosta</surname> <given-names>Edina</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1199022/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Haddison</surname> <given-names>Eposi Christiana</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1321935/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Kagina</surname> <given-names>Benjamin Mugo</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/567151/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Faculty of Health Science, School of Public Health and Family Medicine, University of Cape Town</institution>, <addr-line>Cape Town</addr-line>, <country>South Africa</country></aff>
<aff id="aff2"><sup>2</sup><institution>Vaccines for Africa Initiative, School of Public Health and Family Medicine, University of Cape Town</institution>, <addr-line>Cape Town</addr-line>, <country>South Africa</country></aff>
<aff id="aff3"><sup>3</sup><institution>Saa Health District, Centre Regional Delegation of Public Health</institution>, <addr-line>Saa</addr-line>, <country>Cameroon</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Satinder Aneja, Sharda University, India</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Jyoti Joshi, Amity University, India; Allison Mari Dering-Anderson, University of Nebraska Medical Center, United States; Dinesh Paul, National Institute of Health and Family Welfare, India</p></fn>
<corresp id="c001">&#x0002A;Correspondence: Viola Chepkurui <email>violachepkurui2&#x00040;gmail.com</email></corresp>
<fn fn-type="other" id="fn001"><p>This article was submitted to Children and Health, a section of the journal Frontiers in Public Health</p></fn></author-notes>
<pub-date pub-type="epub">
<day>28</day>
<month>09</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>9</volume>
<elocation-id>736532</elocation-id>
<history>
<date date-type="received">
<day>05</day>
<month>07</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>07</day>
<month>09</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2021 Chepkurui, Amponsah-Dacosta, Haddison and Kagina.</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Chepkurui, Amponsah-Dacosta, Haddison and Kagina</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license> 
</permissions>
<abstract><p>Multiple public health emergencies (PHEs) experienced annually in the World Health Organisation (WHO) Africa region affect the provision of health services, including immunization. However, there is limited information on the performance of national immunization programs (NIPs) in WHO Africa countries that experience PHEs. This study assessed PHEs (armed conflicts, disasters, and disease outbreaks) and the performance of NIPs using global and regional immunization targets outlined for the Decade of Vaccines. Thirteen beneficiary countries of PHE mitigation funds from the African Public Health Emergency Fund were used as case studies. Data on PHEs and immunization indicators between 2010 and 2019 in selected countries were extracted from different PHE databases and the WHO/UNICEF immunization database, respectively. The data were stratified by country and summarized using descriptive statistics. Mann-Whitney <italic>U</italic> test was done to determine the association between the frequency of PHEs and the performance of NIPs. There were 175 disease outbreaks, 288 armed conflicts, and 318 disasters in the examined countries between 2010 and 2019. The Democratic Republic of Congo had the highest total PHE count (<italic>n</italic> = 208), while Liberia had the lowest (<italic>n</italic> = 20). Only three of the 13 countries had a median coverage value for the third dose of the combined Diphtheria, Tetanus, and Pertussis vaccine (DTP3) that had attained the target for &#x02265;90% immunization coverage. Higher counts of armed conflict and total PHEs were associated with not meeting immunization targets for national DTP3 coverage of &#x02265;90% and Maternal and Neonatal Tetanus elimination, <italic>p</italic> &#x0003C; 0.01. It was clear that in the WHO Africa region, PHEs are prevalent, irrespective of a country&#x02019;s level of immunization maturity, and have the potential to derail the progress of NIPs in the absence of effective interventions. As we transition toward the Immunization Agenda 2030, we recommend that the WHO Africa region prioritizes interventions to mitigate the impacts of PHEs on NIPs.</p></abstract>
<kwd-group>
<kwd>public health emergencies</kwd>
<kwd>national immunization programs</kwd>
<kwd>decade of vaccines</kwd>
<kwd>WHO Africa Region</kwd>
<kwd>African countries</kwd>
</kwd-group>
<counts>
<fig-count count="4"/>
<table-count count="4"/>
<equation-count count="0"/>
<ref-count count="50"/>
<page-count count="12"/>
<word-count count="7858"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>Public Health Emergencies (PHEs) are recognized as a major threat to global public health security (<xref ref-type="bibr" rid="B1">1</xref>). Many countries experience different types of PHEs including infectious disease outbreaks, natural disasters<xref ref-type="fn" rid="fn0001"><sup>1</sup></xref> (e.g., floods), and human-induced hazards (e.g., armed conflicts) (<xref ref-type="bibr" rid="B2">2</xref>). In the WHO Africa region, more than 100 PHEs are reported annually (<xref ref-type="bibr" rid="B3">3</xref>). A PHE is described as a situation that threatens the health, safety, and well-being of a large number of people and which often necessitates substantial multi-sectoral assistance (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B4">4</xref>). For instance, the recent unprecedented occurrence of the Coronavirus Disease (COVID-19) pandemic, which is classified as a PHE of international concern (<xref ref-type="bibr" rid="B5">5</xref>), has highlighted more than ever that PHEs do transcend international boundaries and have negative impacts on various facets of society including public health (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B3">3</xref>). The impact PHEs have on public health cannot be understated, given they cause widespread disruption to both the broader health system and provision of health services (<xref ref-type="bibr" rid="B6">6</xref>&#x02013;<xref ref-type="bibr" rid="B8">8</xref>) including immunization (<xref ref-type="bibr" rid="B9">9</xref>, <xref ref-type="bibr" rid="B10">10</xref>).</p>
<p>The disruption to national immunization programs (NIPs) experienced in countries with PHEs has been associated with suboptimal immunization coverage rates (<xref ref-type="bibr" rid="B6">6</xref>, <xref ref-type="bibr" rid="B11">11</xref>, <xref ref-type="bibr" rid="B12">12</xref>). The plummeting coverage witnessed during PHEs is facilitated by reduced access to immunization services, destroyed and disrupted vaccine logistic systems, depleted and diverted financial and human resources for immunization, and reduced trust toward immunization (<xref ref-type="bibr" rid="B6">6</xref>, <xref ref-type="bibr" rid="B11">11</xref>, <xref ref-type="bibr" rid="B12">12</xref>). Many of these factors have eminently featured during the COVID-19 pandemic (<xref ref-type="bibr" rid="B13">13</xref>&#x02013;<xref ref-type="bibr" rid="B15">15</xref>). The sub-optimal immunization coverage rates, also, create large pockets of unimmunized and under-immunized children and adults thereby lowering herd immunity (<xref ref-type="bibr" rid="B16">16</xref>, <xref ref-type="bibr" rid="B17">17</xref>). The compromised herd immunity acts together with other PHE co-existing factors like poor sanitation and overcrowding to provide ideal conditions for outbreaks of Vaccine-Preventable Diseases (VPDs) (<xref ref-type="bibr" rid="B18">18</xref>&#x02013;<xref ref-type="bibr" rid="B20">20</xref>). Due to such frailties, countries affected by PHEs are reported to lag in meeting global and regional immunization targets aimed at control, elimination, and eradication of VPDs (<xref ref-type="bibr" rid="B21">21</xref>, <xref ref-type="bibr" rid="B22">22</xref>).</p>
<p>The Global Vaccine Action Plan (GVAP) was developed in 2011 to actualize the vision of the Decade of Vaccines (DoV) for having a world where individuals and communities will be able to enjoy lives free from VPDs by 2020 (<xref ref-type="bibr" rid="B23">23</xref>). The Regional Strategic Plan for Immunization (RSPI) is a WHO Africa region contextualized immunization framework adopted from the GVAP with goals for attainment by 2020 (<xref ref-type="bibr" rid="B24">24</xref>). Although through the two immunization frameworks the WHO Africa region has achieved substantive gain in immunization e.g., the successful eradication of wild poliovirus disease (<xref ref-type="bibr" rid="B25">25</xref>), many targets remain unmet, owing to among other factors the prevalence of PHEs (<xref ref-type="bibr" rid="B26">26</xref>). During the DoV there has been growing concern on the possible role PHEs play in delaying achievement for set immunization targets (<xref ref-type="bibr" rid="B22">22</xref>, <xref ref-type="bibr" rid="B26">26</xref>). According to reports by the WHO, Strategic Advisory Groups of Experts in immunization (SAGE), PHEs are recognized as one of the major shifts during the decade and a key driver of inequity in immunization access between and within countries in the region (<xref ref-type="bibr" rid="B22">22</xref>). With the end in sight of the DoV in 2020, there is need to take stock of immunization performance in countries experiencing PHEs. The evidence generated would advance the understanding that is critical in strengthening NIPs in the context of PHEs.</p>
<p>In as much PHEs have been recognized to have repercussions on NIPs, inadequate focus has been given on synthesizing evidence in PHE-affected settings in the WHO Africa region. Few studies have attempted to describe immunization in countries affected by PHEs, however, a majority are restricted to single types of PHEs, especially armed conflict and single immunization indicators (<xref ref-type="bibr" rid="B6">6</xref>, <xref ref-type="bibr" rid="B11">11</xref>, <xref ref-type="bibr" rid="B27">27</xref>). To the best of our knowledge, this will be the first study that aims to characterize NIPs in the WHO Africa region experiencing PHEs, using three different types of PHEs (i.e., armed conflicts, disease outbreaks, and disasters) and the DoV immunization targets to account for the performance of NIPs. Also, being a precursor descriptive study, NIP performance in countries affected by PHEs will be singularly analyzed without controlling for other third variables that may have influenced NIP performance. As such, the general scope of the study is limited in inferring a cause-effect relationship between PHEs and NIPs performance.</p>
</sec>
<sec sec-type="materials and methods" id="s2">
<title>Materials and Methods</title>
<sec>
<title>Study Design</title>
<p>A retrospective case study using secondary data on immunization indicators and PHEs.</p>
</sec>
<sec>
<title>Study Population</title>
<p>Countries in the WHO Africa region that have received funding from the African Public Health Emergency Fund (APHEF) between 2012 and 2019 were used as case studies (<xref ref-type="bibr" rid="B28">28</xref>). It is important to note that the performance of NIPs in the selected countries is contingent on various factors, including the baseline start date for the different NIPs, the socio-economic contexts, national health budgets, political will, and leadership. Furthermore, the annual contributions made to the APHEF by WHO Africa countries and the basis for receiving funds during PHEs are determined by a defined set of country characteristics including income status, debt burden, equity, and level of poverty (<xref ref-type="bibr" rid="B28">28</xref>).</p>
</sec>
<sec>
<title>Data Sources</title>
<p>The study utilized retrospective secondary data from different sources available as of July 2020 and reported from 2010 to 2019 (<xref ref-type="fig" rid="F1">Figure 1</xref>). The specified period is based on the DoV implementation timeline. Also, the APHEF, which was used to select the study population was instituted in 2012 (<xref ref-type="bibr" rid="B28">28</xref>) and is synchronous in timing with that of the DoV.</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p>A conceptual framework of initiatives used to inform the choice of the study variables.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpubh-09-736532-g0001.tif"/>
</fig>
<p>Data on immunization indicators outlined in the DoV were obtained through country reports made to the World Health Organisation (WHO) and the United Nations Children&#x00027;s Fund (UNICEF) using the Joint Reporting Form (JRF) (<xref ref-type="bibr" rid="B29">29</xref>).</p>
<p>The APHEF had supported three types of PHEs namely armed conflict, disasters, and disease outbreaks (<xref ref-type="bibr" rid="B28">28</xref>). Data was collated from different electronic databases reporting on these three types of PHEs. The databases used were:</p>
<list list-type="simple">
<list-item><p>a) The Emergency Events Database (EM-DAT) from the Centre for Research on the Epidemiology of Disasters that reports on natural and technological disasters, for the study these two disaster subtypes were collectively referred to as disasters (<xref ref-type="bibr" rid="B30">30</xref>).</p></list-item>
<list-item><p>b) The Uppsala Conflict Data Program (UCDP), a database that curates data on various types of armed conflicts namely state conflicts, one-sided violence conflicts, and non-state conflicts (<xref ref-type="bibr" rid="B31">31</xref>).</p></list-item>
<list-item><p>c) The WHO Emergency Preparedness and Response an integrated global alert and response system that reports on occurrences of disease outbreaks (<xref ref-type="bibr" rid="B32">32</xref>), which was corroborated with data from the Program for Monitoring Emerging Diseases Mail (PROMED- Mail) (<xref ref-type="bibr" rid="B33">33</xref>).</p></list-item>
</list>
</sec>
<sec>
<title>The Determinant Variables</title>
<p>The counts of the three types of PHE namely disasters, armed conflicts, and disease outbreaks, and the total PHE count (the cumulative total count of the three PHE types) were used as the main determinant variables.</p>
</sec>
<sec>
<title>Outcome Variables</title>
<p>The following selected immunization indicators implemented for the DoV (<xref ref-type="fig" rid="F1">Figure 1</xref>) were used as the study outcome variables:</p>
<list list-type="simple">
<list-item><p>a) The combined Diphtheria, Tetanus, and Pertussis vaccine (DTP) coverage rates which were used as proxies to gauge the strength and reach of routine immunization programs (<xref ref-type="bibr" rid="B23">23</xref>) including:</p>
<list list-type="simple">
<list-item><p>i) Having &#x02265;90% national coverage for the third dose of the DTP (DTP3)</p></list-item>
<list-item><p>ii) Drop-out rate between the first dose of the DTP (DTP1) and DTP3</p></list-item>
</list>
</list-item> 
<list-item><p>b) Introduction of new and underutilized vaccines (<xref ref-type="bibr" rid="B23">23</xref>); three vaccines were considered for the study and used as proxies, they included two childhood vaccines- the Rotavirus vaccine and the Pneumococcal Conjugate Vaccine (PCV), and one adolescent vaccine-the Human Papillomavirus (HPV) vaccine.</p></list-item>
<list-item><p>c) The attainment status for the elimination of Maternal and Neonatal Tetanus (MNT) which is one of the targeted VPDs for regional and global elimination (<xref ref-type="bibr" rid="B23">23</xref>).</p></list-item>
<list-item><p>d) The establishment of national immunization technical advisory group (NITAG); which was used to gauge immunization prioritization and country ownership for NIPs. Data for this variable was obtained for both the existence and functionality of a NITAG. The functionality of a NITAG is pegged on an existing country NITAG meeting 6 minimum criteria as outlined by the WHO including the (A) administrative basis for the advisory group (B) formal written terms of reference (C) at least five different areas of expertise represented among NITAG core members (D) at least one meeting per year (E) circulation of the agenda documents at least 1 week before meetings, and (F) the mandatory disclosure of any conflict of interest (<xref ref-type="bibr" rid="B34">34</xref>). Each of the 6 outlined criteria needs to be satisfied for a country&#x00027;s NITAG to be merited as functional.</p></list-item>
<list-item><p>e) Immunization maturity grid which is a six-component tool used to rate immunization systems and identify gaps in the performance of NIPs. The six components used to rate the immunization maturity grid include (A) programme management and financing (B) immunization service delivery and new vaccine introduction (C) disease surveillance and VPD outbreak management (D) data management and analytics (E) vaccine quality, safety, and regulation and (F) community engagement (<xref ref-type="bibr" rid="B35">35</xref>).</p></list-item>
</list>
</sec>
<sec>
<title>Data Synthesis and Analysis</title>
<p>To establish any underlying trends in the total PHE count for each of the study countries, the study duration was stratified into three-time points in 2010 at the beginning of the study, in 2014 after 5 years, and in 2019- 10 years and the end of the study.</p>
<p>The three types of PHEs were stratified by country using stacked bar plots in each of the study years to establish both the overall prevalence for each of the three types of PHEs and identify the individual country-specific prevalence for a given PHE.</p>
<p>All the statistical analysis and visualization of study data were done using the R software version 4.0.2 (R Core Team, 2020). The selected DoV immunization indicators were stratified by country and summarized using descriptive statistics such as the mean [Standard Deviation (SD)] and/or the median [Interquartile range (IQR)] for numerical continuous variables depending on their normality distribution, and counts and proportions, used for categorical variables. The results were presented in a table. We also used, a line graph to establish the temporal trends in the national and regional DTP3 coverage indicator.</p>
<p>Two groups were created for the target immunization indicators outlined in the DoV. The two groups were based on the number of years from 2010 to 2019 that each of the selected countries had either met a specific target or had failed to meet the target. Labels used for the two target groups were &#x0201C;target met&#x0201D;- Yes, and &#x0201C;target not met&#x0201D;- No. The distribution of the three types of PHEs and the total PHE counts were compared across the two groups using the Mann-Whitney U group-comparison test, as the data had a non-normal distribution. Statistical significance for the tests was defined at <italic>p</italic> &#x0003C; 0.05.</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<sec>
<title>Countries Benefiting From the APHEF</title>
<p>As of 2017, the APHEF had supported 13 countries within the WHO Africa region. The 13 countries were Angola, Burundi, Cameroon, the Central African Republic, the Democratic Republic of Congo, Ethiopia, Guinea, Liberia, Malawi, Niger, Sierra Leone, South Sudan, and Zimbabwe.</p>
</sec>
<sec>
<title>PHEs Reported Between 2010 and 2019</title>
<p>Between 2010 and 2019 PHEs were present in each of the study population countries and varied in count across the countries (<xref ref-type="fig" rid="F2">Figure 2</xref>).</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>Distribution of total PHE counts by country from 2010 to 2019.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpubh-09-736532-g0002.tif"/>
</fig>
<p>The highest total PHE count was recorded in the Democratic Republic of Congo (<italic>n</italic> = 208), while the lowest total PHE count was recorded in Liberia (<italic>n</italic> = 20) (<xref ref-type="fig" rid="F2">Figure 2</xref>). Despite being the youngest country in the WHO Africa region, South Sudan (gained independence in 2011), had the second-highest total PHE count at (<italic>n</italic> = 99).</p>
<sec>
<title>Total PHE Counts Across Three Time Periods</title>
<p>A snapshot of the total PHE count in the 13 countries in 2010, 2014, and 2019 showed the individual country trends at the beginning of the study period in 2010, after 5 years, and at 10 years in 2019. The PHE counts fluctuated across the study periods. While eight countries witnessed a decrease in the PHE count in 2014 compared to 2010, nine countries in 2019 recorded an increase in the PHE count compared to 2014 (<xref ref-type="table" rid="T1">Table 1</xref>).</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>Total PHE counts stratified by year in 2010, 2014, and 2019.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left"><bold>Country</bold></th>
<th valign="top" align="center"><bold>2010</bold></th>
<th valign="top" align="center"><bold>2014</bold></th>
<th valign="top" align="center"><bold>2019</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Angola</td>
<td valign="top" align="center">5</td>
<td valign="top" align="center" style="background-color:#add146">1</td>
<td valign="top" align="center" style="background-color:#fecd08">4</td>
</tr>
<tr>
<td valign="top" align="left">Burundi</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center" style="background-color:#add146">2</td>
<td valign="top" align="center" style="background-color:#fecd08">6</td>
</tr>
<tr>
<td valign="top" align="left">Cameroon</td>
<td valign="top" align="center">7</td>
<td valign="top" align="center" style="background-color:#add146">4</td>
<td valign="top" align="center" style="background-color:#fecd08">6</td>
</tr>
<tr>
<td valign="top" align="left">The Central African Republic</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center" style="background-color:#fecd08">10</td>
<td valign="top" align="center" style="background-color:#add146">9</td>
</tr>
<tr>
<td valign="top" align="left">Democratic Republic of Congo</td>
<td valign="top" align="center">20</td>
<td valign="top" align="center" style="background-color:#fecd08">22</td>
<td valign="top" align="center" style="background-color:#fecd08">36</td>
</tr>
<tr>
<td valign="top" align="left">Ethiopia</td>
<td valign="top" align="center">5</td>
<td valign="top" align="center" style="background-color:#add146">2</td>
<td valign="top" align="center" style="background-color:#fecd08">11</td>
</tr>
<tr>
<td valign="top" align="left">Guinea</td>
<td valign="top" align="center">4</td>
<td valign="top" align="center" style="background-color:#97b0d9">4</td>
<td valign="top" align="center" style="background-color:#add146">2</td>
</tr>
<tr>
<td valign="top" align="left">Liberia</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center" style="background-color:#add146">1</td>
<td valign="top" align="center" style="background-color:#97b0d9">1</td>
</tr>
<tr>
<td valign="top" align="left">Malawi</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center" style="background-color:#add146">0</td>
<td valign="top" align="center" style="background-color:#fecd08">3</td>
</tr>
<tr>
<td valign="top" align="left">Niger</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center" style="background-color:#97b0d9">3</td>
<td valign="top" align="center" style="background-color:#fecd08">7</td>
</tr>
<tr>
<td valign="top" align="left">Sierra Leone</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center" style="background-color:#add146">2</td>
<td valign="top" align="center" style="background-color:#97b0d9">2</td>
</tr>
<tr>
<td valign="top" align="left">South Sudan<xref ref-type="table-fn" rid="TN1"><sup>a</sup></xref></td>
<td valign="top" align="center" style="background-color:#b3b2b3"/>
<td valign="top" align="center">8</td>
<td valign="top" align="center" style="background-color:#fecd08">13</td>
</tr>
<tr>
<td valign="top" align="left">Zimbabwe</td>
<td valign="top" align="center">6</td>
<td valign="top" align="center" style="background-color:#add146">5</td>
<td valign="top" align="center" style="background-color:#add146">2</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic><inline-graphic xlink:href="fpubh-09-736532-i0001.tif"/>Increase in PHE count</italic>.</p>
<p><italic><inline-graphic xlink:href="fpubh-09-736532-i0002.tif"/>Decrease in PHE count</italic>.</p>
<p><italic><inline-graphic xlink:href="fpubh-09-736532-i0003.tif"/>PHE count constant</italic>.</p>
<p><italic><inline-graphic xlink:href="fpubh-09-736532-i0004.tif"/>No data</italic>.</p>
<fn id="TN1"><label>a</label><p><italic>South Sudan gained independence in 2011. As such data for 2010 is unavailable</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec>
<title>Types of PHEs</title>
<p>Three types of PHEs namely armed conflicts, disasters, and disease outbreaks were extracted from databases and summarized (<xref ref-type="fig" rid="F3">Figure 3</xref>). In the 13 countries and from 2010 to 2019, a total count of <italic>n</italic> = 175, <italic>n</italic> = 288, and <italic>n</italic> = 318 for disease outbreaks, armed conflicts, and disasters was recorded, respectively.</p>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p>Three types of PHEs recorded in 13 WHO Africa region countries between 2010 and 2019.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpubh-09-736532-g0003.tif"/>
</fig>
<p>A summary of the annual distribution of the three types of PHEs occurring in each country during the study period is shown (<xref ref-type="fig" rid="F3">Figure 3</xref>).</p>
<p>Overall, counts of armed conflicts (<italic>n</italic> = 89), disasters (<italic>n</italic> = 91), and disease outbreaks (<italic>n</italic> = 28) were highest in the Democratic Republic of Congo (<xref ref-type="fig" rid="F3">Figure 3</xref>). In general, and with exception of the Democratic Republic of Congo, armed conflicts and disease outbreaks were majorly prevalent in all other countries for the entire study period (<xref ref-type="fig" rid="F3">Figure 3</xref>).</p>
</sec>
</sec>
<sec>
<title>Performance of NIPs in the Period of PHEs</title>
<p>The target immunization indicators for the DoV were used to assess the performance of NIPs in the study countries from 2010 to 2019.</p>
<sec>
<title>National DTP3 Coverage</title>
<p>The DTP3 coverage was used as a proxy indicator for the performance of NIPs in meeting national and regional immunization coverage targets.</p>
<p>The recorded trend in the annual national DTP3 coverage estimates in each of the 13 countries points to fluctuating patterns during the entire study period (<xref ref-type="fig" rid="F4">Figure 4</xref>).</p>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p>Annual DTP3 coverage trends between 2010 and 2019 for the 13 countries and the WHO Africa region.</p></caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fpubh-09-736532-g0004.tif"/>
</fig>
<p>Only three (Burundi, Malawi, and Zimbabwe) of the 13 countries had a median national DTP3 coverage value that had met the &#x02265;90% immunization coverage DoV target (<xref ref-type="table" rid="T2">Table 2</xref>). In addition to this, Burundi&#x00027;s annual DTP3 coverage rates were found to supersede the &#x02265;90% immunization coverage target during the entire study period (<xref ref-type="fig" rid="F4">Figure 4</xref>).</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p>Descriptive summary of NIP related immunization indicators between 2010 and 2019 stratified by country.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th/>
<th valign="top" align="center"><bold>Angola</bold></th>
<th valign="top" align="center"><bold>Burundi</bold></th>
<th valign="top" align="center"><bold>Cameroon</bold></th>
<th valign="top" align="center"><bold>CAR<xref ref-type="table-fn" rid="TN2"><sup>a</sup></xref></bold></th>
<th valign="top" align="center"><bold>DRC<xref ref-type="table-fn" rid="TN3"><sup>b</sup></xref></bold></th>
<th valign="top" align="center"><bold>Ethiopia</bold></th>
<th valign="top" align="center"><bold>Guinea</bold></th>
<th valign="top" align="center"><bold>Liberia</bold></th>
<th valign="top" align="center"><bold>Malawi</bold></th>
<th valign="top" align="center"><bold>Niger</bold></th>
<th valign="top" align="center"><bold>Sierra Leone</bold></th>
<th valign="top" align="center"><bold>South Sudan<xref ref-type="table-fn" rid="TN2"><sup>c</sup></xref></bold></th>
<th valign="top" align="center"><bold>Zimbabwe</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td/>
<td valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="13"><bold>Number of years data was obtained</bold></td>
</tr> 
<tr>
<td valign="top" align="left"><bold>Immunization indicators</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>9</bold></td>
<td valign="top" align="center"><italic><bold>n &#x0003D;</bold></italic> <bold>10</bold></td>
</tr>
<tr>
<td valign="top" align="left" style="border-top: thin solid #000000;"><bold>DTP3 national coverage %:</bold></td>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>
<td style="border-top: thin solid #000000;"/>		
</tr>
<tr>
<td valign="top" align="left">Median</td>
<td valign="top" align="center">55.50</td>
<td valign="top" align="center">94.50</td>
<td valign="top" align="center">80.00</td>
<td valign="top" align="center">47.00</td>
<td valign="top" align="center">61.50</td>
<td valign="top" align="center">64.50</td>
<td valign="top" align="center">47.00</td>
<td valign="top" align="center">80.00</td>
<td valign="top" align="center">91.50</td>
<td valign="top" align="center">79.50</td>
<td valign="top" align="center">89.50</td>
<td valign="top" align="center">49.00</td>
<td valign="top" align="center">90.00</td>
</tr>
<tr>
<td valign="top" align="left">[IQR]</td>
<td valign="top" align="center">[5.25]</td>
<td valign="top" align="center">[2.75]</td>
<td valign="top" align="center">[9.50]</td>
<td valign="top" align="center">[0.00]</td>
<td valign="top" align="center">[11.00]</td>
<td valign="top" align="center">[6.25]</td>
<td valign="top" align="center">[8.25]</td>
<td valign="top" align="center">[8.25]</td>
<td valign="top" align="center">[6.25]</td>
<td valign="top" align="center">[7.50]</td>
<td valign="top" align="center">[5.75]</td>
<td valign="top" align="center">[6.00]</td>
<td valign="top" align="center">[3.50]</td>
</tr>
<tr>
<td valign="top" align="left"><bold>Percentage drop-out rate between DTP1 and DTP3:</bold></td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>					 
</tr>
<tr>
<td valign="top" align="left">Median</td>
<td valign="top" align="center">15.00</td>
<td valign="top" align="center">3.00</td>
<td valign="top" align="center">8.00</td>
<td valign="top" align="center">24.00</td>
<td valign="top" align="center">6.00</td>
<td valign="top" align="center">5.00</td>
<td valign="top" align="center">6.00</td>
<td valign="top" align="center">8.50</td>
<td valign="top" align="center">4.50</td>
<td valign="top" align="center">7.50</td>
<td valign="top" align="center">5.50</td>
<td valign="top" align="center">17.00</td>
<td valign="top" align="center">4.50</td>
</tr>
<tr>
<td valign="top" align="left">[IQR]</td>
<td valign="top" align="center">[1.75]</td>
<td valign="top" align="center">[0.75]</td>
<td valign="top" align="center">[0.75]</td>
<td valign="top" align="center">[9.50]</td>
<td valign="top" align="center">[3.50]</td>
<td valign="top" align="center">[2.50]</td>
<td valign="top" align="center">[9.00]</td>
<td valign="top" align="center">[4.50]</td>
<td valign="top" align="center">[2.50]</td>
<td valign="top" align="center">[5.50]</td>
<td valign="top" align="center">[3.25]</td>
<td valign="top" align="center">[14.00]</td>
<td valign="top" align="center">[1.75]</td>
</tr>
<tr>
<td valign="top" align="left">Total number of new and underutilized vaccines introduced as of 2019 (Rotavirus, PCV and HPV vaccines)</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">0</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">3</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">0</td>
<td valign="top" align="center">3</td>
</tr>
<tr>
<td valign="top" align="left">Number of years a country has had an existing NITAG:</td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">Years (%)</td>
<td valign="top" align="center">6 (60)</td>
<td valign="top" align="center">1(10)</td>
<td valign="top" align="center">5 (50)</td>
<td valign="top" align="center">1(10)</td>
<td valign="top" align="center">4 (40)</td>
<td valign="top" align="center">7 (70)</td>
<td valign="top" align="center">2 (20)</td>
<td valign="top" align="center">0 (0)</td>
<td valign="top" align="center">5 (50)</td>
<td valign="top" align="center">8 (80)</td>
<td valign="top" align="center">4 (40)</td>
<td valign="top" align="center">7 (77.80)</td>
<td valign="top" align="center">10 (100)</td>
</tr>
<tr>
<td valign="top" align="left">Number of years a country has had a functional NITAG:</td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">Years (%)</td>
<td valign="top" align="center">0 (0)</td>
<td valign="top" align="center">0 (0)</td>
<td valign="top" align="center">2 (20)</td>
<td valign="top" align="center">0 (0)</td>
<td valign="top" align="center">2 (20)</td>
<td valign="top" align="center">4 (40)</td>
<td valign="top" align="center">1 (10)</td>
<td valign="top" align="center">0 (0)</td>
<td valign="top" align="center">3 (30)</td>
<td valign="top" align="center">2 (20)</td>
<td valign="top" align="center">3 (30)</td>
<td valign="top" align="center">3 (33.30)</td>
<td valign="top" align="center">4 (40)</td>
</tr>
<tr>
<td valign="top" align="left">Has country eliminated MNT</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
</tr>
<tr>
<td valign="top" align="left">Number of years a country has been MNT free within the study period</td>
<td valign="top" align="center">0</td>
<td valign="top" align="center">10</td>
<td valign="top" align="center">8</td>
<td valign="top" align="center">0</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">0</td>
<td valign="top" align="center">9</td>
<td valign="top" align="center">10</td>
<td valign="top" align="center">0</td>
<td valign="top" align="center">7</td>
<td valign="top" align="center">0</td>
<td valign="top" align="center">10</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="TN2"><label>a</label><p><italic>CAR Central African Republic</italic>.</p></fn>
<fn id="TN3"><label>b</label><p><italic>DRC Democratic Republic of Congo</italic>.</p></fn>
<fn id="TN4"><label>c</label><p><italic>South Sudan gained independence in 2011 hence data obtained were for 9 years</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
<p>The WHO Africa region DTP3 coverage between 2010 and 2019 stagnated at around the average 72% mark (<xref ref-type="fig" rid="F4">Figure 4</xref>). Six countries, (the Central African Republic, the Democratic Republic of Congo, South Sudan, Guinea, Angola, and Ethiopia) had national DTP3 coverage rates below the regional DTP3 stagnation point in the entire study period (<xref ref-type="fig" rid="F4">Figure 4</xref>). While four countries maintained a coverage rate above that of the region including Burundi, Malawi, Zimbabwe, and Sierra Leone. The remaining three countries (Liberia, Cameroon, and Niger) had fluctuating immunization coverage rates.</p>
<p>Two countries were recorded to have major dips, followed by major increases in their national DTP3 vaccine coverage in some of the study years; they were the Central African Republic and Liberia, these dips occurred in 2013 and 2014, respectively (<xref ref-type="fig" rid="F4">Figure 4</xref>).</p>
</sec>
<sec>
<title>Percentage Drop-Out Rates Between DTP1 and DTP3</title>
<p>To gauge accessibility and utilization of immunization services we used drop-out rates between DTP1 and DTP3. Three countries (The Central African Republic, South Sudan, and Angola) had drop-out rates above 10%. The highest drop-out rate in the 10-year study period was recorded in the Central African Republic, with a median [IQR] of 24.00 [9.50] (<xref ref-type="table" rid="T2">Table 2</xref>).</p>
</sec>
<sec>
<title>Introduction of New and Underutilized Vaccines</title>
<p>To gauge the progress of countries in the introduction of new vaccines in their NIPs three vaccines: The Rotavirus, PCV, and the HPV vaccines were considered. The PCV and the Rotavirus vaccine were first introduced in the WHO Africa region between the years 2008 and 2009, while the HPV vaccine was first introduced in 2014. Among the thirteen countries, eleven countries had introduced PCV, while seven countries had introduced the Rotavirus vaccine to their immunization schedule between 2010 and 2014. Only four countries had introduced the HPV vaccine in the second half of the study period (2015&#x02013;2019). The HPV vaccine is the newest to be introduced in the NIPs of countries in the WHO Africa region.</p>
<p>Ethiopia, Liberia, Malawi, and Zimbabwe had introduced all three vaccines by 2019. While Guinea and South Sudan were yet to introduce any of the three vaccines in their NIPs by 2019 (<xref ref-type="table" rid="T2">Table 2</xref>).</p>
</sec>
<sec>
<title>Elimination of MNT</title>
<p>To monitor the performance of countries in meeting global and regional elimination targets for key VPDs the elimination of MNT was considered. As of 2019, 8 of the 13 countries had attained MNT elimination. Countries yet to eliminate MNT by 2019 were Angola, the Central African Republic, Guinea, Niger, and South Sudan (<xref ref-type="table" rid="T2">Table 2</xref>).</p>
</sec>
<sec>
<title>Establishment of NITAGs</title>
<p>To gauge progress toward country ownership of NIPs and immunization prioritization, the establishment of NITAGs in the study countries was examined during the entire study period.</p>
<p>Except for Zimbabwe, none of the countries had an existing NITAG for the entire 10-year study period. Niger, South Sudan, Ethiopia, and Angola had existing NITAGs for over half of the study period. The remaining countries had existing NITAGs for less than half of the study period, apart from Liberia which had no existing NITAG for the 10-year study period (<xref ref-type="table" rid="T2">Table 2</xref>).</p>
<p>All 13 study countries had functional NITAGs for less than half of the study period (<xref ref-type="table" rid="T2">Table 2</xref>).</p>
</sec>
<sec>
<title>Immunization Maturity Grid</title>
<p>The immunization maturity grid is a six-component tool developed by the WHO aimed at attaining control, elimination, and eradication of key VPDs in the African continent. As of 2018, the NIPs of the 13 countries were classified into four maturity levels as shown in <xref ref-type="table" rid="T3">Table 3</xref>.</p>
<table-wrap position="float" id="T3">
<label>Table 3</label>
<caption><p>Classification of countries according to their immunization maturity grid.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left"><bold>Immunization maturity grid</bold></th>
<th valign="top" align="left"><bold>Countries in the maturity grid</bold></th>
<th valign="top" align="left"><bold>Rating criteria<xref ref-type="table-fn" rid="TN5"><sup>a</sup></xref></bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Level 1</td>
<td valign="top" align="left">The Central African Republic, South Sudan, Sierra Leone, and Liberia</td>
<td valign="top" align="left">Countries with very weak immunization systems</td>
</tr>
<tr>
<td valign="top" align="left">Level 2</td>
<td valign="top" align="left">Guinea, Angola, and the Democratic Republic of Congo</td>
<td valign="top" align="left">Countries with significant deficiencies in immunization service delivery</td>
</tr>
<tr>
<td valign="top" align="left">Level 3</td>
<td valign="top" align="left">Cameroon, Niger, Ethiopia, and Malawi</td>
<td valign="top" align="left">Countries with targeted areas for improvement in their immunization programs</td>
</tr>
<tr>
<td valign="top" align="left">Level 4</td>
<td valign="top" align="left">Burundi and Zimbabwe</td>
<td valign="top" align="left">Countries with strong and robust immunization systems</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="TN5"><label>a</label><p><italic>Adopted from the Business case for WHO immunization activities on the African continent 2018 (<xref ref-type="bibr" rid="B35">35</xref>)</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
</sec>
</sec>
<sec>
<title>The Association Between PHEs and NIP Performance</title>
<p>We compared the distribution in count for the three types of PHEs and the total PHEs across the two groups created from the DoV immunization targets.</p>
<p>In the 13 countries from 2010 to 2019, higher armed conflict counts were associated with not meeting the immunization targets for national DTP3 coverage of &#x02265;90% and MNT elimination, <italic>p</italic> &#x0003C; 0.01 (<xref ref-type="table" rid="T4">Table 4</xref>).</p>
<table-wrap position="float" id="T4">
<label>Table 4</label>
<caption><p>A Comparison of PHE count across two target groups of immunization indicators outlined in the DoV.</p></caption>
<table frame="hsides" rules="groups">
<thead>
<tr>
<th/>
<th valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="3"><bold>Target for &#x02265;90% national DTP3 coverage</bold></th>
<th valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="3"><bold>Target for MNT elimination</bold></th>
<th valign="top" align="left" style="border-bottom: thin solid #000000;" colspan="3"><bold>Target to have a functional NITAG</bold></th>
<th valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="3"><bold>Target to introduce at least one new or underutilized vaccine<xref ref-type="table-fn" rid="TN8"><sup>b</sup></xref></bold></th>
</tr>
<tr>
<th/>
<th valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="1"><bold>Target not met</bold></th>
<th valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="1"><bold>Target met</bold></th>
<th valign="top" align="left"><italic><bold>p-</bold></italic><break/><italic><bold>value</bold></italic></th>
<th valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="1"><bold>Target not met</bold></th>
<th valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="1"><bold>Target met</bold></th>
<th valign="top" align="left"><italic><bold>p-</bold></italic><break/><italic><bold>value</bold></italic></th>
<th valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="1"><bold>Target not met</bold></th>
<th valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="1"><bold>Target met</bold></th>
<th valign="top" align="left"><italic><bold>p-</bold></italic><break/><italic><bold>value</bold></italic></th>
<th valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="1"><bold>Target not met</bold></th>
<th valign="top" align="center" style="border-bottom: thin solid #000000;" colspan="1"><bold>Target met</bold></th>
<th valign="top" align="left"><italic><bold>p-</bold></italic><break/><italic><bold>value</bold></italic></th>
</tr>
<tr>
<th/>
<th valign="top" align="center"><italic><bold>n</bold></italic><bold><xref ref-type="table-fn" rid="TN7"><sup>a</sup></xref> &#x0003D;102</bold></th>
<th valign="top" align="center"><italic><bold>n</bold></italic><bold><xref ref-type="table-fn" rid="TN7"><sup>a</sup></xref> &#x0003D;27</bold></th>
<th/>
<th valign="top" align="center"><italic><bold>n</bold></italic><bold><xref ref-type="table-fn" rid="TN7"><sup>a</sup></xref> &#x0003D; 71</bold></th>
<th valign="top" align="center"><italic><bold>n</bold></italic><bold><xref ref-type="table-fn" rid="TN7"><sup>a</sup></xref> &#x0003D; 58</bold></th>
<th/>
<th valign="top" align="center"><italic><bold>n</bold></italic><bold><xref ref-type="table-fn" rid="TN7"><sup>a</sup></xref> &#x0003D; 105</bold></th>
<th valign="top" align="center"><italic><bold>n</bold></italic><bold><xref ref-type="table-fn" rid="TN7"><sup>a</sup></xref> &#x0003D; 24</bold></th>
<th/>
<th valign="top" align="center"><italic><bold>n</bold></italic><bold><xref ref-type="table-fn" rid="TN7"><sup>a</sup></xref> &#x0003D; 103</bold></th>
<th valign="top" align="center"><italic><bold>n</bold></italic><bold><xref ref-type="table-fn" rid="TN7"><sup>a</sup></xref> &#x0003D; 24</bold></th>
<th/>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><bold>PHE type</bold></td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>					 
</tr>
<tr>
<td valign="top" align="left"><bold>Armed conflict</bold></td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>					 
</tr>
<tr>
<td valign="top" align="left">Median</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">0</td>
<td valign="top" align="left">&#x0003C;0.01<xref ref-type="table-fn" rid="TN6"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">0</td>
<td valign="top" align="left">&#x0003C;0.01<xref ref-type="table-fn" rid="TN6"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="center">0</td>
<td valign="top" align="center">0.5</td>
<td valign="top" align="left">0.40</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">0</td>
<td valign="top" align="left">0.05</td>
</tr>
<tr>
<td valign="top" align="left">[IQR]</td>
<td valign="top" align="center">[5]</td>
<td valign="top" align="center">[0]</td>
<td/>
<td valign="top" align="center">[5.5]</td>
<td valign="top" align="center">[1]</td>
<td/>
<td valign="top" align="center">[3]</td>
<td valign="top" align="center">[5]</td>
<td/>
<td valign="top" align="center">[3]</td>
<td valign="top" align="center">[1]</td>
<td/>
</tr>
<tr>
<td valign="top" align="left">Disaster</td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>					 
</tr>
<tr>
<td valign="top" align="left">Median</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">2</td>
<td valign="top" align="left">0.90</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">1</td>
<td valign="top" align="left">0.03<xref ref-type="table-fn" rid="TN6"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">2</td>
<td valign="top" align="left">0.30</td>
<td valign="top" align="center">2</td>
<td valign="top" align="center">2</td>
<td valign="top" align="left">0.60</td>
</tr>
<tr>
<td valign="top" align="left">[IQR]</td>
<td valign="top" align="center">[2]</td>
<td valign="top" align="center">[2]</td>
<td/>
<td valign="top" align="center">[2.5]</td>
<td valign="top" align="center">[2]</td>
<td/>
<td valign="top" align="center">[2]</td>
<td valign="top" align="center">[1]</td>
<td/>
<td valign="top" align="center">[2]</td>
<td valign="top" align="center">[2]</td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><bold>Disease outbreak</bold></td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>					 
</tr>
<tr>
<td valign="top" align="left">Median</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">1</td>
<td valign="top" align="left">0.10</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">1</td>
<td valign="top" align="left">0.90</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">2</td>
<td valign="top" align="left">0.40</td>
<td valign="top" align="center">1</td>
<td valign="top" align="center">1</td>
<td valign="top" align="left">0.60</td>
</tr>
<tr>
<td valign="top" align="left">[IQR]</td>
<td valign="top" align="center">[2]</td>
<td valign="top" align="center">[1.5]</td>
<td/>
<td valign="top" align="center">[2]</td>
<td valign="top" align="center">[2]</td>
<td/>
<td valign="top" align="center">[2]</td>
<td valign="top" align="center">[3]</td>
<td/>
<td valign="top" align="center">[2]</td>
<td valign="top" align="center">[1]</td>
<td/>
</tr>
<tr>
<td valign="top" align="left"><bold>Total PHEs<xref ref-type="table-fn" rid="TN9"><sup>c</sup></xref></bold></td>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
<td/>
</tr>
<tr>
<td valign="top" align="left">Median</td>
<td valign="top" align="center">5</td>
<td valign="top" align="center">3</td>
<td valign="top" align="left">&#x0003C;0.01<xref ref-type="table-fn" rid="TN6"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="center">5</td>
<td valign="top" align="center">3</td>
<td valign="top" align="left">&#x0003C;0.01<xref ref-type="table-fn" rid="TN6"><sup>&#x0002A;</sup></xref></td>
<td valign="top" align="center">4</td>
<td valign="top" align="center">5</td>
<td valign="top" align="left">0.10</td>
<td valign="top" align="center">5</td>
<td valign="top" align="center">5</td>
<td valign="top" align="left">0.06</td>
</tr>
<tr>
<td valign="top" align="left">[IQR]</td>
<td valign="top" align="center">[6]</td>
<td valign="top" align="center">[2]</td>
<td/>
<td valign="top" align="center">[7]</td>
<td valign="top" align="center">[3]</td>
<td/>
<td valign="top" align="center">[5]</td>
<td valign="top" align="center">[6.5]</td>
<td/>
<td valign="top" align="center">[3]</td>
<td valign="top" align="center">[3]</td>
<td/>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn id="TN6"><label>&#x0002A;</label><p><italic>p-value significant</italic>.</p></fn>
<fn id="TN7"><label>a</label><p><italic>Between 2010 and 2019 each of the 13 countries contributed 10 years, except for South Sudan (gained independence in 2011), which contributed 9 years, hence, the total number of years for all the 13 countries was 129</italic>.</p></fn>
<fn id="TN8"><label>b</label><p><italic>For this target 2 years had no data as two countries had already introduced all the three new vaccines examined in the study in their preceding years</italic>.</p></fn>
<fn id="TN9"><label>c</label><p><italic>This variable is a function of the total count of the armed conflict, disaster, and disease outbreak variable</italic>.</p></fn>
</table-wrap-foot>
</table-wrap>
<p>Higher disaster counts were also, associated with not meeting the target for MNT elimination, <italic>p</italic> = 0.03 (<xref ref-type="table" rid="T4">Table 4</xref>).</p>
<p>Higher total PHE counts were associated with not meeting immunization targets for national DTP3 coverage of &#x02265;90% and not attaining MNT elimination, <italic>p</italic> &#x0003C; 0.01 (<xref ref-type="table" rid="T4">Table 4</xref>).</p>
<p>Higher counts of armed conflicts, disasters, disease outbreaks, and total PHEs were not associated with meeting the DoV immunization targets for introducing new vaccines and the presence of functional NITAGs, <italic>p</italic> &#x0003E; 0.05 (<xref ref-type="table" rid="T4">Table 4</xref>).</p>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<p>The primary intent of the study was to characterize the NIPs of countries within the WHO Africa region experiencing PHEs using immunization targets outlined for the DoV as proxy indicators. We found that PHEs were endemic during the entire study period and the performance of NIPs in the PHE-endemic countries was variable, although mostly suboptimal. Additionally, higher total PHE and armed conflict counts were associated with not achieving the immunization targets for &#x02265;90% national DTP3 coverage and MNT elimination. Higher disaster counts were also associated with not eliminating MNT.</p>
<p>The endemicity of PHEs observed during the study period, agrees with other reports on the recurrent and diverse nature of PHEs experienced in the WHO Africa region (<xref ref-type="bibr" rid="B3">3</xref>, <xref ref-type="bibr" rid="B36">36</xref>). While armed conflict and disasters were found to have the highest cumulative count in our study, contrary, trends were observed in the WHO Africa region, with a majority of reported PHEs being that of disease outbreaks (<xref ref-type="bibr" rid="B3">3</xref>, <xref ref-type="bibr" rid="B36">36</xref>, <xref ref-type="bibr" rid="B37">37</xref>). The discrepancy can be explained by findings from other studies done in similar settings, where disease outbreaks were noted to occasionally go unrecorded as they occur as a twin PHE, in the context of armed conflicts and disasters (<xref ref-type="bibr" rid="B2">2</xref>, <xref ref-type="bibr" rid="B38">38</xref>).</p>
<p>Regardless of the immunization maturity level, the overall performance of NIPs in the PHE endemic countries was variable but predominantly suboptimal. The fluctuating and the low national DTP3 coverage rates below the WHO Africa region DTP3 coverage stagnation point are synonymous with DTP3 coverage reports in other NIPs in the region during PHEs (<xref ref-type="bibr" rid="B11">11</xref>, <xref ref-type="bibr" rid="B21">21</xref>). As outlined by Grundy et al. in their study, other WHO Africa region countries like Nigeria and Somalia that have experienced constant civil unrest and were yet to benefit from the APHEF were reported to similarly have sub-optimal DTP3 coverage rates (<xref ref-type="bibr" rid="B6">6</xref>). Similarly, the high DTP vaccine drop-out; classified as &#x02265;10% (<xref ref-type="bibr" rid="B24">24</xref>), recorded in some of the NIPs, concur with findings from a study by Mugali et al. (<xref ref-type="bibr" rid="B39">39</xref>) in Afghanistan where high DTP drop-out rates were associated with conflict and insecurity.</p>
<p>The introduction of the PCV and the Rotavirus vaccines into the NIPs of the study countries was high compared to the HPV vaccine. These findings are comparable to those in the region as 86, 76, and 8% of GAVI eligible countries had introduced the PCV, Rotavirus, and the HPV vaccines, respectively, by 2017 (<xref ref-type="bibr" rid="B40">40</xref>). Delay in HPV vaccine introduction has been attributed elsewhere to the poor adoption of life-course immunization, vaccine supply constraints, and pricing issues (<xref ref-type="bibr" rid="B16">16</xref>, <xref ref-type="bibr" rid="B22">22</xref>) which stand exacerbated by PHEs (<xref ref-type="bibr" rid="B6">6</xref>). The outlier countries yet to introduce any of the three selected vaccines are potential key pointers to the contributing role PHEs play in delaying vaccine introductions into NIPs as raised by Grundy et al. in their study (<xref ref-type="bibr" rid="B6">6</xref>).</p>
<p>Despite the positive progress in NITAG establishment in the WHO Africa region (<xref ref-type="bibr" rid="B41">41</xref>), a non-consistent pattern in their existence and functionality simultaneously existed. Such inconsistent trends have been attributed in previous reports to the lack of political commitment and country ownerships of NIPs and the low NITAG financial investments, in general, and during PHEs (<xref ref-type="bibr" rid="B34">34</xref>, <xref ref-type="bibr" rid="B41">41</xref>).</p>
<p>The elimination target for MNT was not met in countries with high counts of PHEs like South Sudan, the Central African Republic, Niger, Guinea, and Angola. The enlisted five countries constitute nearly 50% of the remaining global MNT elimination priority countries (<xref ref-type="bibr" rid="B42">42</xref>) and have similar trends with other MNT priority countries like Afghanistan and Yemen, where the presence of protracted PHEs has been blamed on delaying elimination (<xref ref-type="bibr" rid="B43">43</xref>).</p>
<p>Having higher armed conflict and total PHE counts were associated with not attaining the target for &#x02265;90% national DTP3 coverage. These findings are comparable to those from studies conducted in similar contexts where armed conflicts were reported to be associated with poor immunization coverage outcomes (<xref ref-type="bibr" rid="B6">6</xref>, <xref ref-type="bibr" rid="B11">11</xref>, <xref ref-type="bibr" rid="B27">27</xref>). Conversely, while the Democratic Republic of Congo had the highest PHE count, its national DTP3 coverage was not the poorest. As described elsewhere, this finding in the Democratic Republic of Congo could be partly attributed to the humanitarian aid in the country (<xref ref-type="bibr" rid="B44">44</xref>). In addition, there have been recent specific plans developed by the government of the Democratic Republic of Congo in collaboration with technical and financial partners such as WHO and GAVI, The Vaccine Alliance to strengthen the NIPs in the country (<xref ref-type="bibr" rid="B45">45</xref>).</p>
<p>The findings further show that periods of higher counts of armed conflicts, disasters, and total PHEs were also associated with not eliminating MNT. Elimination of MNT in the WHO Africa region has been evasive to some extent, with most of the countries prioritized for MNT elimination being affected by PHEs (<xref ref-type="bibr" rid="B46">46</xref>, <xref ref-type="bibr" rid="B47">47</xref>). In other PHE endemic contexts, where MNT elimination remains unattained, low tetanus vaccine coverage among women of reproductive age, unhygienic birth practices, delayed treatment, and inadequate MNT surveillance have been cited to delay progress (<xref ref-type="bibr" rid="B46">46</xref>, <xref ref-type="bibr" rid="B48">48</xref>).</p>
<p>Higher counts of all the three types of PHEs and the total PHEs were not associated with meeting the immunization targets of having functional NITAGs or the introduction of new vaccines. The lack of consistency in the existence and functionality of NITAGs is not uncommon as observed in other PHE-prone contexts in the region (<xref ref-type="bibr" rid="B41">41</xref>). On the other hand, during PHEs, whereas the functionality of NITAGs may be compromised, the WHO recommends humanitarian immunization teams to utilize the unique expertise and local knowledge of existing NITAG members (<xref ref-type="bibr" rid="B17">17</xref>). For the target to introduce new vaccines, a possible caveat may exist in interpreting association, as within the scope of this study, only three vaccines were selected out of a pool of new vaccines. Conversely, we equally recognize that despite PHE endemicity, most of the case study countries had performed relatively well in this target which is also credited as one of the WHO Africa region DoV successes owing to political commitment and strong immunization investments (<xref ref-type="bibr" rid="B22">22</xref>). Arguably, such progressive performance noted in this DoV target, can offer a lesson; that the link between PHEs and immunization performance may not be always absolute.</p>
<p>In summation, it is imperative to note that central to the attainment of the discussed DoV targets and &#x0201C;health for all&#x0201D; as embodied under Sustainable Development Goal 3 (SDG 3) is the presence of peace and stability in a country which is a critical pillar to SDG 16 namely &#x0201C;peace justice and strong institutions&#x0201D; (<xref ref-type="bibr" rid="B49">49</xref>, <xref ref-type="bibr" rid="B50">50</xref>). This will reciprocally ensure that every individual regardless of their background will have access to vaccines (<xref ref-type="bibr" rid="B50">50</xref>).</p>
<p>Our results should be interpreted in light of certain caveats. First, our study was limited to three broad types of PHEs, that may not be exhaustively representative of all types of PHE experienced in the study countries. Furthermore, it would have been useful to provide information on the duration of each of the PHEs assessed per country. However, owing to the retrospective and longitudinal design of this study, as well as the incomplete and inconsistent reporting of PHE data, the severity, and the duration of the PHEs, could not be analyzed within the scope of this study. It should be noted that PHEs often overlap in the real-world context, and it may be challenging to identify how a single PHE may have impacted the performance of immunization programs. Additionally, we may be unable to determine how previous PHEs experienced before the start of the study period in 2010 may have affected the NIPs in the selected countries.</p>
<p>Secondly, we used country-generated reports from the WHO/UNICEF JRF to abstract data on DoV immunization indicators. It is, possible that potential inaccuracies in the country data may have influenced the outcome of our study. However, this could not be avoided within the scope of this study. Data quality issues from country reports have been constantly highlighted as one of the major concerns by the WHO, SAGE in their annual DoV immunization reports (<xref ref-type="bibr" rid="B22">22</xref>, <xref ref-type="bibr" rid="B26">26</xref>). Similarly, since our study used immunization indicators outlined for the DOV between 2010 and 2020 to assess NIP performance, analyzing pre-PHE years immunization data was beyond the scope of our study owing to differences in immunization goals between the pre-PHE period and the PHE period. Additionally, data on NIP immunization maturity was first availed in 2018 in the WHO Africa region (<xref ref-type="bibr" rid="B35">35</xref>), as such the study is unable to account for NIP maturity data for the period preceding 2018.</p>
<p>Lastly, while associations between the occurrence of PHEs and the performance of immunization programs were highlighted we cannot rule out with certainty the influence of other third variables on immunization program performance. It is also, worth noting several confounders may have affected the performance of NIPs in addition to PHEs which we were unable to account for, owing to the limited scope of the study in inferring a cause-effect relationship between PHEs and NIP performance. Similarly, it was not possible to account for emergency responses aimed at providing immunization services during PHEs. As such, our estimated results may represent a lower bound for the true effect of PHEs on immunization.</p>
<p>Future research investigations should address these limitations to broaden the scope of evidence on the interactions that exist between PHEs and immunization performance. We propose that future studies should further explore (1) how other types and grades of PHEs and the duration of PHEs may variably impact immunization performance, (2) immunization performance at the sub-national level using immunization data from localized communities where PHEs are recorded to occur, (3) how other third variables including NIP performance confounders may act together with PHEs to influence immunization performance, and (4) the analysis of PHEs and immunization performance in other WHO regions in comparison with the findings from the WHO Africa region.</p>
</sec>
<sec sec-type="conclusions" id="s5">
<title>Conclusion</title>
<p>PHEs are endemically present in the WHO Africa region and form part of the eco-system in which NIPs exist. With the goal of extending immunization to all individuals, countries experiencing PHEs within the WHO Africa region may be excluded from reaping the full benefits of immunization owing to unmet targets. Immunization performance in countries where PHEs are endemic are largely suboptimal and not at par with envisioned immunization targets for the DoV. As we transition to the Immunization Agenda 2030, PHEs like the COVID-19 pandemic, armed conflicts, and disasters are a major threat to NIPs. Therefore, priority should be given to developing evidence-based interventions to mitigate the impacts of PHEs on NIPs. Such interventions may include the commitment by governments in the WHO Africa region to strengthen the resilience of NIPs against PHE challenges by investing in PHE prevention and mitigation initiatives like the APHEF. Characterizing the performance of NIPs in PHE contexts is undoubtedly elemental in bridging the gap to equitable access to immunization for all populations, irrespective of where they live, thus enabling the collective achievement in shared goals like the DoV, SDG 3 and 16, and the Immunization Agenda 2030, thereby, enhancing regional health outcomes.</p>
</sec>
<sec sec-type="data-availability" id="s6">
<title>Data Availability Statement</title>
<p>The original contributions presented in the study are included in the article/supplementary material, further inquiries can be directed to the corresponding authors.</p>
</sec>
<sec id="s7">
<title>Author Contributions</title>
<p>BK conceived of the presented idea, provided critical feedback, and helped shape the manuscript. VC extracted and analyzed the data and wrote the manuscript. EA-D and ECH contributed to the development of the methods and coherence of the manuscript. All authors read, edited, and approved the final manuscript.</p>
</sec>
<sec sec-type="COI-statement" id="conf1">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s8">
<title>Publisher&#x00027;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec> 
</body>
<back>
<ack><p>This manuscript formed part of a thesis submitted to the University of Cape Town, Faculty of Health Sciences.</p>
</ack>
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<fn id="fn0001"><p><sup>1</sup>Disaster- Is described as an event that results in serious disruption of the functioning of a community or a society causing widespread human, material, economic or environmental losses which exceed the ability of the affected community or society to cope using its own resources. Available from: <ext-link ext-link-type="uri" xlink:href="https://www.emdat.be/Glossary">https://www.emdat.be/Glossary</ext-link>.</p></fn>
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