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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Anim. Sci.</journal-id>
<journal-title>Frontiers in Animal Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Anim. Sci.</abbrev-journal-title>
<issn pub-type="epub">2673-6225</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fanim.2021.755842</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Animal Science</subject>
<subj-group>
<subject>Perspective</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Early Phenotype Programming in Birds by Temperature and Nutrition: A Mini-Review</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Andrieux</surname> <given-names>Charlotte</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x02020;</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Petit</surname> <given-names>Ang&#x000E9;lique</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x02020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1486708/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Collin</surname> <given-names>Anne</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Houssier</surname> <given-names>Marianne</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/766948/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>M&#x000E9;tayer-Coustard</surname> <given-names>Sonia</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1174095/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Panserat</surname> <given-names>St&#x000E9;phane</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/565187/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Pitel</surname> <given-names>Fr&#x000E9;d&#x000E9;rique</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1317475/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Coustham</surname> <given-names>Vincent</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x0002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/779556/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>INRAE, Universit&#x000E9; de Pau et des Pays de l&#x00027;Adour, E2S UPPA, NUMEA</institution>, <addr-line>Saint-P&#x000E9;e-sur-Nivelle</addr-line>, <country>France</country></aff>
<aff id="aff2"><sup>2</sup><institution>INRAE, Universit&#x000E9; de Tours</institution>, <addr-line>BOA, Nouzilly</addr-line>, <country>France</country></aff>
<aff id="aff3"><sup>3</sup><institution>INRAE, Universit&#x000E9; de Toulouse, ENVT, GenPhySE</institution>, <addr-line>Castanet-Tolosan</addr-line>, <country>France</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Pascale Chavatte-Palmer, INRA UMR 1198 Biologie du D&#x000E9;veloppement et Reproduction, France</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Dana L. M. Campbell, Commonwealth Scientific and Industrial Research Organisation (CSIRO), Australia; Christi Swaggerty, United States Department of Agriculture (USDA), United States</p></fn>
<corresp id="c001">&#x0002A;Correspondence: Vincent Coustham  <email>vincent.coustham&#x00040;inrae.fr</email></corresp>
<fn fn-type="other" id="fn001"><p>This article was submitted to Animal Physiology and Management, a section of the journal Frontiers in Animal Science</p></fn>
<fn fn-type="equal" id="fn002"><p>&#x02020;These authors have contributed equally to this work</p></fn></author-notes>
<pub-date pub-type="epub">
<day>04</day>
<month>01</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>2</volume>
<elocation-id>755842</elocation-id>
<history>
<date date-type="received">
<day>09</day>
<month>08</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>14</day>
<month>12</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2022 Andrieux, Petit, Collin, Houssier, M&#x000E9;tayer-Coustard, Panserat, Pitel and Coustham.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Andrieux, Petit, Collin, Houssier, M&#x000E9;tayer-Coustard, Panserat, Pitel and Coustham</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license> 
</permissions>
<abstract><p>Early development is a critical period during which environmental influences can have a significant impact on the health, welfare, robustness and performance of livestock. In oviparous vertebrates, such as birds, embryonic development takes place entirely in the egg. This allows the effects of environmental cues to be studied directly on the developing embryo. Interestingly, beneficial effects have been identified in several studies, leading to innovative procedures to improve the phenotype of the animals in the long term. In this review, we discuss the effects of early temperature and dietary programming strategies that both show promising results, as well as their potential transgenerational effects. The timing, duration and intensity of these procedures are critical to ensure that they produce beneficial effects without affecting animal survival or final product quality. For example, cyclic increases in egg incubation temperature have been shown to improve temperature tolerance and promote muscular growth in chickens or fatty liver production in mule ducks. <italic>In ovo</italic> feeding has also been successfully used to enhance digestive tract maturation, optimize chick development and growth, and thus obtain higher quality chicks. In addition, changes in the nutritional availability of methyl donors, for example, was shown to influence offspring phenotype. The molecular mechanisms behind early phenotype programming are still under investigation and are probably epigenetic in nature as shown by recent work in chickens.</p></abstract>
<kwd-group>
<kwd>programming</kwd>
<kwd>bird</kwd>
<kwd>temperature</kwd>
<kwd>nutrition</kwd>
<kwd><italic>in ovo</italic></kwd>
<kwd>embryo</kwd>
</kwd-group>
<counts>
<fig-count count="0"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="107"/>
<page-count count="8"/>
<word-count count="7568"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>Early development is a critical period during which the environment influences the health, welfare, robustness and performance of livestock (Ho et al., <xref ref-type="bibr" rid="B37">2011</xref>; Reed and Clark, <xref ref-type="bibr" rid="B79">2011</xref>). Long-term effects of the early environment, i.e., during embryogenesis or the first days of life, have been demonstrated in cattle (Reynolds and Vonnahme, <xref ref-type="bibr" rid="B82">2017</xref>), sheep (Reynolds et al., <xref ref-type="bibr" rid="B81">2010</xref>), pigs (Feeney et al., <xref ref-type="bibr" rid="B32">2014</xref>), fish (Panserat et al., <xref ref-type="bibr" rid="B73">2019</xref>), and birds (Feeney et al., <xref ref-type="bibr" rid="B32">2014</xref>; Loyau et al., <xref ref-type="bibr" rid="B56">2015</xref>) among others. The oviparous vertebrate model differs from the others due to an embryonic development outside of the dam. Therefore, the embryo can be easily manipulated, opening up new opportunities for phenotypic programming to improve poultry production.</p>
<p>Embryonic incubation conditions have been studied since the mid-20th century to find optimal incubation parameters for poultry production. The concept of programming has emerged more recently with the demonstration of beneficial effects of different stimuli such as temperature (Loyau et al., <xref ref-type="bibr" rid="B56">2015</xref>), nutrition (Uni et al., <xref ref-type="bibr" rid="B95">2005</xref>; Cherian, <xref ref-type="bibr" rid="B18">2011</xref>) or changes in maternal diet (Hynd et al., <xref ref-type="bibr" rid="B39">2016</xref>; Ba&#x000E9;za et al., <xref ref-type="bibr" rid="B10">2017</xref>). The purpose of this review is to provide a concise description of the advancement of this concept in four poultry species (broiler chickens, quails, ducks and turkeys) with a particular interest on two main embryonic programming strategies, nutrition and temperature.</p>
</sec>
<sec id="s2">
<title>Nutritional Programming Strategies</title>
<sec>
<title>The Maternal Nutrition as a Lever to Program the Progeny&#x00027;s Phenotype</title>
<p>Several maternal nutritional strategies have been developed to modulate egg nutrient content to obtain higher quality chicks in terms of robustness, growth and body composition. The links between hen nutrition and management, egg composition and subsequent animal behavior, performance, and disease susceptibility are well-established (Aigueperse et al., <xref ref-type="bibr" rid="B1">2013</xref>). The breeder hen&#x00027;s diet can modulate the levels of other essential nutrients, which in turn can impact the fitness of hatched chicks and their phenotype later in life (for reviews, see R&#x000FC;hl, <xref ref-type="bibr" rid="B84">2007</xref>; Morisson et al., <xref ref-type="bibr" rid="B63">2017</xref>).</p>
<p>Fatty acids are essential for embryonic development, bird growth, the development of the central nervous system and the immune system (Noble et al., <xref ref-type="bibr" rid="B67">1984</xref>; Ding and Lilburn, <xref ref-type="bibr" rid="B27">1996</xref>; Wang et al., <xref ref-type="bibr" rid="B101">2004</xref>; Cherian, <xref ref-type="bibr" rid="B19">2015</xref>; Koppenol et al., <xref ref-type="bibr" rid="B47">2015</xref>; Thanabalan and Kiarie, <xref ref-type="bibr" rid="B93">2021</xref>). The balance of fatty acids (FA) can be modulated via the hen&#x00027;s diet. Ducklings from ducks fed with a FA &#x003C9;3-enriched diet have a higher live weight at hatch (D0), D28 and D56 and a lower feed conversion ratio for the growing period (Ba&#x000E9;za et al., <xref ref-type="bibr" rid="B10">2017</xref>). Reduced hyperactivity and stress responsiveness in ducklings were also observed. Supplementation with FA &#x003C9;3 LC also reduced the frequency and severity of pecking in ducklings.</p>
<p>In low protein feeding programs, not only are egg-laying rate and egg weight altered, but also the amount of leptin in the yolk sac and the expression of a number of genes in the yolk sac, hypothalamus, or muscle of the offspring (Rao et al., <xref ref-type="bibr" rid="B78">2009</xref>). The chicks have lower hatch weight but faster post-hatch growth. More recently, it has been shown that feeding broiler breeders reduced protein diets has a negative impact on reproductive performance but improved offspring performance (Lesuisse et al., <xref ref-type="bibr" rid="B50">2017</xref>), even in subsequent generations (Lesuisse et al., <xref ref-type="bibr" rid="B50">2017</xref>, <xref ref-type="bibr" rid="B51">2018</xref>). Studies testing different levels of digestible lysine (Ciacciariello and Tyler, <xref ref-type="bibr" rid="B21">2013</xref>) or arginine (Fernandes et al., <xref ref-type="bibr" rid="B33">2014</xref>) in hen diets have shown positive effects on offspring such as performance improvement, carcass yield, abdominal fat content, and bone quality for arginine supplementation.</p>
<p>Mineral and vitamin supplementations have often been studied to solve defects of mineralization of the skeleton and legs problems. Vitamins can be enriched in the egg through the hen&#x00027;s diet. Vitamin A is produced by the hen from the carotenoids in the feed. They have antioxidant properties, which are essential for the embryo. Indeed, in the last stage of incubation, fatty acid oxidation increases, as does the production of free radicals and oxidative stress. These processes mainly cause damage to the embryos (Surai et al., <xref ref-type="bibr" rid="B91">2016</xref>). Vitamin D3 regulates the flow of calcium through the chorioallantoic membrane. A vitamin D-deficient diet leads to decreased Ca<sup>&#x0002B;&#x0002B;</sup> transport across the chorioallantoic membrane and decreased Ca<sup>&#x0002B;&#x0002B;</sup> accumulation in the embryo, as well as increased late embryonic mortality (malposition, beak unable to break through the shell). Minerals such as iodine, selenium, magnesium, zinc, copper, iron or manganese can also be enriched in eggs (Jiakui and Xiaolong, <xref ref-type="bibr" rid="B43">2004</xref>; Chinrasri et al., <xref ref-type="bibr" rid="B20">2013</xref>; Favero et al., <xref ref-type="bibr" rid="B31">2013</xref>; Saunders-Blades and Korver, <xref ref-type="bibr" rid="B86">2015</xref>; Torres and Korver, <xref ref-type="bibr" rid="B94">2018</xref>; Xie et al., <xref ref-type="bibr" rid="B104">2019</xref>).</p>
<p>Overall, maternal feeding approaches optimize the hen&#x00027;s diet through supplementation or restriction of a wide variety of nutrients. However, it is often difficult to assess whether the effects of maternal diet on offspring are direct or not.</p>
</sec>
<sec>
<title><italic>In ovo</italic> Nutrition Programming Strategies</title>
<p><italic>In ovo</italic> feeding is a more direct way to influence offspring phenotype. Several studies have reported the use of <italic>in ovo</italic> nutrient supplementation to reduce the hatch window and improve health, post-hatch immune status, hatchability, hatched chick weight, growth performance, and meat quality (Uni and Ferket, <xref ref-type="bibr" rid="B96">2004</xref>; Wei et al., <xref ref-type="bibr" rid="B102">2011</xref>; Kadam et al., <xref ref-type="bibr" rid="B44">2013</xref>; Roto et al., <xref ref-type="bibr" rid="B83">2016</xref>; Gao et al., <xref ref-type="bibr" rid="B34">2017</xref>; Peebles, <xref ref-type="bibr" rid="B74">2018</xref>; Taha-Abdelaziz et al., <xref ref-type="bibr" rid="B92">2018</xref>; Jha et al., <xref ref-type="bibr" rid="B42">2019</xref>; Kalantar et al., <xref ref-type="bibr" rid="B45">2019</xref>; Ayansola et al., <xref ref-type="bibr" rid="B9">2021</xref>). New <italic>in ovo</italic> strategies also aim to address new challenges such as finding alternatives to antibiotic use through probiotic injections (Oladokun and Adewole, <xref ref-type="bibr" rid="B70">2020</xref>). Therefore, <italic>in ovo</italic> stimulation of chicken microflora offers a better approach in establishing intestinal microflora (Alagawany et al., <xref ref-type="bibr" rid="B3">2021</xref>).</p>
<p>At hatching, chicks switch from a yolk FA-based diet to a complete diet. Injection of carbohydrates and amino acids (AA) during embryonic development allows chicks to adapt to their post-hatch diet. Carbohydrates are widely studied because their concentration within the egg is less than one percent of total nutrients (Campos et al., <xref ref-type="bibr" rid="B17">2011</xref>). To limit the utilization of FA and proteolysis of muscle proteins for energy purposes, injections of carbohydrates alone or combined with other nutrients of interest have been performed <italic>in ovo</italic> to increase glycogen storage and modulate energy status of chicks (Retes et al., <xref ref-type="bibr" rid="B80">2017</xref>). Results depended on the type of sugar injected, injection site, embryo developmental stage, and genetics. Smirnov et al. (<xref ref-type="bibr" rid="B90">2006</xref>) showed an effect of carbohydrate injection on intestinal epithelium development with a 27% increase in villus area at hatching.</p>
<p>Amino acid administration improves hatching weight (Ohta et al., <xref ref-type="bibr" rid="B69">2001</xref>) which persists up to 56 days of age in some studies (Al-Murrani, <xref ref-type="bibr" rid="B5">1982</xref>). <italic>In ovo</italic> injection of AA such as arginine, considered an essential amino acid in birds, has been used to improve post-hatch growth performance via regulation of protein synthesis through the mTOR pathway (Yu et al., <xref ref-type="bibr" rid="B107">2018</xref>). Arginine also stimulated myogenin gene expression in cultured chicken tissues (Li et al., <xref ref-type="bibr" rid="B54">2016b</xref>). Moreover, <italic>in ovo</italic> injection of sulfur AA (methionine plus cysteine) resulted in improved embryonic development, IGF-I and TLR4 gene expression, antioxidant status and jejunum histomorphometry of newly hatched broiler chicks exposed to heat stress during incubation (Elnesr et al., <xref ref-type="bibr" rid="B29">2019</xref>; Elwan et al., <xref ref-type="bibr" rid="B30">2019</xref>).</p>
<p><italic>In ovo</italic> injection of AA, FA, vitamins, and trace elements on early post-hatch growth may also impact the development of lymphoid organs (thymus, bursa, and spleen) and immune parameters in broilers (Bakyaraj et al., <xref ref-type="bibr" rid="B11">2012</xref>). <italic>In ovo</italic> vitamin and mineral administration significantly augmented the hatchability percentage and body weight of chicks post hatching (Alagawany et al., <xref ref-type="bibr" rid="B4">2020</xref>; Hassan et al., <xref ref-type="bibr" rid="B36">2021</xref>). The efficacy of vitamins C, E, D3, and folic acid on embryonic health and development has been reported in the literature (Peebles, <xref ref-type="bibr" rid="B74">2018</xref>). The use of the yolk by the embryo for energy purposes results in oxidative processes, leading to the degradation of polyunsaturated fatty acids in cell membranes. Vitamins, such as vitamin E or C, protect the embryo by limiting the negative effects of free radicals (Surai et al., <xref ref-type="bibr" rid="B91">2016</xref>; Ara&#x000FA;jo et al., <xref ref-type="bibr" rid="B8">2018</xref>; Peebles, <xref ref-type="bibr" rid="B74">2018</xref>). Results may depend on doses, ages, and injection sites.</p>
<p>Determining the mechanisms by which egg nutrients regulate cellular metabolism, signaling, gene expression and function is critical to improving nutrient utilization, poultry production efficiency and animal robustness. In birds, most studies only report phenotypic results of <italic>in ovo</italic> injections. Only a few recent studies are beginning to decipher the mechanisms involved in these phenotypic changes. Epigenetic changes may be involved, especially when methyl group donors, such as methionine, are injected (Anderson et al., <xref ref-type="bibr" rid="B7">2012</xref>; Donohoe and Bultman, <xref ref-type="bibr" rid="B28">2012</xref>; Veron et al., <xref ref-type="bibr" rid="B97">2018</xref>). Thus, manipulation of sulfur AA content can induce changes in cellular function that may have implications for the development, long-term growth, and health of the animal. The early utilization of nutrients like AA can influence disease resistance and embryo survival (Saeed et al., <xref ref-type="bibr" rid="B85">2019</xref>). Folate supplementation improved growth performance, immune function, and folate metabolism of broilers through epigenetic regulation of immune genes by altering chromatin conformation and epigenetic marks such as histone methylation (Li et al., <xref ref-type="bibr" rid="B52">2016a</xref>). Injection of betaine (a component of the methionine cycle), also considered an effective antioxidant agent and methyl donor, affects hepatic cholesterol metabolism through epigenetic gene regulation in newly hatched chicks (Hu et al., <xref ref-type="bibr" rid="B38">2015</xref>).</p>
</sec>
</sec>
<sec id="s3">
<title>Temperature Programming Strategies</title>
<sec>
<title>Temperature Increases During Egg Incubation</title>
<p>Thermal manipulation (TM) during embryogenesis has been studied for over three decades. TM involves altering egg incubation temperature to improve post-hatch physiological responses of birds (Iqbal et al., <xref ref-type="bibr" rid="B40">1990</xref>). In particular, fine-tuning egg incubation temperature has been used to develop strategies to help chickens better withstand heat later in life (Loyau et al., <xref ref-type="bibr" rid="B56">2015</xref>). TM has since been studied in several other avian species, including turkeys for thermoregulation and muscle growth (Maltby et al., <xref ref-type="bibr" rid="B60">2004</xref>; Piestun et al., <xref ref-type="bibr" rid="B77">2015</xref>), ducks for the lipid metabolism and liver (Wang et al., <xref ref-type="bibr" rid="B100">2014</xref>; Massimino et al., <xref ref-type="bibr" rid="B61">2019</xref>), and quail for growth, physiological and metabolic parameters (Vitorino Carvalho et al., <xref ref-type="bibr" rid="B99">2020</xref>).</p>
<p>Cyclic increases in incubation temperature, mimicking naturally fluctuating conditions, have been found to improve thermal tolerance while minimizing hatching defects (Piestun et al., <xref ref-type="bibr" rid="B76">2008</xref>; Loyau et al., <xref ref-type="bibr" rid="B56">2015</xref>). Because of the interference between the thermoregulatory system and other body functions, TM has also been shown to alter a broader range of phenotypes. For instance, TM has been shown to affect growth in broiler chickens and quails (Loyau et al., <xref ref-type="bibr" rid="B57">2013</xref>; Vitorino Carvalho et al., <xref ref-type="bibr" rid="B99">2020</xref>), muscle development in broiler chickens (Collin et al., <xref ref-type="bibr" rid="B22">2007</xref>; Piestun et al., <xref ref-type="bibr" rid="B75">2009</xref>), skin vascularization in broiler chickens (Morita et al., <xref ref-type="bibr" rid="B64">2016</xref>) and immunity in Pekin ducks (Shanmugasundaram et al., <xref ref-type="bibr" rid="B87">2018</xref>). In Pekin ducks, TM positively impacted muscle fiber diameter and regulatory pathways of muscle development (Liu et al., <xref ref-type="bibr" rid="B55">2015</xref>; Li et al., <xref ref-type="bibr" rid="B53">2017</xref>). Interestingly, TM increased liver weight (Liu et al., <xref ref-type="bibr" rid="B55">2015</xref>) and lipogenesis gene activity in Pekin ducks (Wang et al., <xref ref-type="bibr" rid="B100">2014</xref>). Three different TM conditions were shown to result in increased fatty liver weight, lipid amount, and droplets size after the overfeeding period in mule ducks (Massimino et al., <xref ref-type="bibr" rid="B61">2019</xref>).</p>
<p>Several factors must be considered when implementing a thermal incubation strategy, the most important being the timing and the cyclicality of the treatment and the level of temperature increase (Loyau et al., <xref ref-type="bibr" rid="B56">2015</xref>). For example, early days of embryogenesis and continuous temperature increases should be avoided, as they are associated with hatching defects (Massimino et al., <xref ref-type="bibr" rid="B61">2019</xref>; Vitorino Carvalho et al., <xref ref-type="bibr" rid="B99">2020</xref>). Breeding age and genetics contribute to the effectiveness of TM (Yal&#x000E7;in et al., <xref ref-type="bibr" rid="B105">2005</xref>). Increasing the relative humidity in the incubator is another important parameter to prevent dehydration during temperature elevation (Loyau et al., <xref ref-type="bibr" rid="B56">2015</xref>). Therefore, incubation parameters must be finely tuned to tip the balance toward positive rather than negative effects. This may explain why this seemingly straightforward procedure is not yet widely used in hatcheries.</p>
<p>One way to refine practices is to understand the mechanisms underlying the effects of TM. With advances in next-generation sequencing, genome-wide gene expression and epigenetic data have shed the light on some central and peripheral molecular effects of TM. In 35-day-old chickens and quails, TM has been shown to have a limited effect on gene expression in muscle and hypothalamus under normal rearing conditions (Loyau et al., <xref ref-type="bibr" rid="B59">2016</xref>; Vitorino Carvalho et al., <xref ref-type="bibr" rid="B98">2021</xref>). However, when animals were subjected to heat exposure at the same age, a much stronger gene expression response was found in the TM group compared to the control group. This may be explained by the involvement of epigenetic marks that are imprinted during the embryonic heat exposure and may trigger a differential response when the animals are again exposed to heat. This hypothesis is supported by the identification of several hundred differential peaks of histone marks altered by TM in the hypothalamus of 35-day-old chickens (David et al., <xref ref-type="bibr" rid="B25">2019</xref>). In ducks, TM has been shown to affect the gene expression level of methylation enzymes (Yan et al., <xref ref-type="bibr" rid="B106">2015</xref>), suggesting that incubation temperature may influence DNA methylation in ducks during early development. In addition, several studies have shown the involvement of heat shock proteins (HSP) and factors (HSF) that protect cells from deleterious effects of stress such as misfolding and apoptosis (Costa et al., <xref ref-type="bibr" rid="B24">2020</xref>). Interestingly, a recent study showed that TM altered the basal expression of HSP108, HSP90, HSF-1 and HSF-2 during late embryogenesis and the first week of life, but also the mRNA expression dynamics of these HSPs and HSFs during heat stress (Al-Zghoul and El-Bahr, <xref ref-type="bibr" rid="B6">2019</xref>). HSPs were also identified as differentially expressed in genome-wide studies (Loyau et al., <xref ref-type="bibr" rid="B59">2016</xref>; Vitorino Carvalho et al., <xref ref-type="bibr" rid="B98">2021</xref>) but did not appear to be altered at the epigenetic level (David et al., <xref ref-type="bibr" rid="B25">2019</xref>), suggesting that other mechanisms may be involved in TM lifelong memory.</p>
</sec>
<sec>
<title>Temperature Decreases During the Egg Incubation</title>
<p>Exposure of eggs to low incubation temperatures has several impacts on chick physiology, but also on long-term health and welfare traits. The young broiler chick is particularly sensitive to cold after hatching (Collin et al., <xref ref-type="bibr" rid="B23">2003</xref>), and later in life, fast-growing broilers placed in a cold environment may develop an accumulation of fluid in the peritoneal cavity called ascites (Decuypere et al., <xref ref-type="bibr" rid="B26">2000</xref>). While continuous incubation of eggs at low temperatures below 36&#x000B0;C results in degraded hatchability and increased pre-hatch incubation time (K&#x000FC;hn et al., <xref ref-type="bibr" rid="B48">1982</xref>; Black and Burggren, <xref ref-type="bibr" rid="B13">2004a</xref>,<xref ref-type="bibr" rid="B14">b</xref>), fine decreases in incubation temperatures have been proposed to stimulate subsequent cold tolerance in birds (Nichelmann and Tzschentke, <xref ref-type="bibr" rid="B66">2002</xref>; Shinder et al., <xref ref-type="bibr" rid="B88">2009</xref>; Ak&#x0015F;it et al., <xref ref-type="bibr" rid="B2">2013</xref>). Exposure to cold at the end of incubation did not alter hatchability but resulted in an increase in internal temperature at 3 days of age compared to control broilers chicks. This improved performance with a 5&#x02013;10% increase in body weight at 14 and 35 days of age in standard temperature rearing (Shinder et al., <xref ref-type="bibr" rid="B89">2011</xref>) and a 4% increase in female weight at 40 days of age, whereas no such change was observed in males (Nyuiadzi et al., <xref ref-type="bibr" rid="B68">2020</xref>). The authors demonstrated beneficial effects of embryonic thermal programming on broiler health, with 19 and 26% reductions in mortality and incidence of ascites, respectively, compared to control chickens under ascites-inducing conditions. Less intense but cyclic cold embryonic thermal programming decreased mortality and ascites incidence during growth of chicks from old breeders (Shinder et al., <xref ref-type="bibr" rid="B89">2011</xref>). Such treatment induced an increase in body weight but a degradation in feed efficiency and a better cold tolerance of broilers when subsequently subjected to cold (Ak&#x0015F;it et al., <xref ref-type="bibr" rid="B2">2013</xref>). Loyau et al. (<xref ref-type="bibr" rid="B58">2014</xref>) reported that at hatching, the same embryonic cold exposure conditions resulted in a 9-fold increase in catalase activity in the liver of treated chicks compared to controls. This suggests that cyclic embryonic cold exposure stimulated antioxidant defenses in chicks, presumably in response to a transient increase in cold-induced tissue oxidation risk during incubation (Mujahid and Furuse, <xref ref-type="bibr" rid="B65">2009</xref>).</p>
<p>These medium- to long-term effects of short cold exposures during incubation have been shown to trigger heat production through modifications in thermoregulatory mechanisms via a change in neuronal receptors sensitivity in the hypothalamus (Nichelmann and Tzschentke, <xref ref-type="bibr" rid="B66">2002</xref>), and an increase in plasma triiodothyronine T3 concentration (Kamanli et al., <xref ref-type="bibr" rid="B46">2015</xref>). Finally, the impacts of cold exposure during incubation on subsequent chick behavior were reported by Bertin et al. (<xref ref-type="bibr" rid="B12">2018</xref>). The authors analyzed the effect of acute decreases in temperature during days 12&#x02013;19 of incubation on the expression of fear-related behaviors in broilers. At hatching, this treatment affected neurodevelopmental plasticity in the brain with higher expression of corticotropin-releasing factor in nuclei of the amygdala, altering the chicks&#x00027; social behavior, novelty perception, and increasing their fear behavior. However, cold exposures during incubation under these conditions impaired the health and welfare of chickens reared in postnatal cold (Nyuiadzi et al., <xref ref-type="bibr" rid="B68">2020</xref>).</p>
</sec>
</sec>
<sec id="s4">
<title>Transgenerational Programming</title>
<p>A growing number of studies have suggested that environmental exposures may be transmitted beyond exposed generations via &#x0201C;transgenerational epigenetic inheritance&#x0201D; (Jablonka and Raz, <xref ref-type="bibr" rid="B41">2009</xref>). Non-genetic transgenerational inheritance has recently been shown to occur in birds (Brun et al., <xref ref-type="bibr" rid="B15">2015</xref>; Leroux et al., <xref ref-type="bibr" rid="B49">2017</xref>). For instance, Brun et al. (<xref ref-type="bibr" rid="B15">2015</xref>) showed that the Muscovy duck diet is capable of affecting traits related to growth and lipid metabolism in the grand-offspring, via the sire. In quail, <italic>in ovo</italic> injection of genistein, a phytoestrogen, impacted reproductive and behavioral traits after 3 generations without further injection (Leroux et al., <xref ref-type="bibr" rid="B49">2017</xref>). In a 3-generation study in broilers, a reduced balanced protein diet induced transgenerational effects, including feather condition, polydipsia and frustration-related behavior (Buyse et al., <xref ref-type="bibr" rid="B16">2020</xref>).</p>
<p>While these examples illustrate the existence of non-genetic inheritance of embryonic exposure in birds, the magnitude of these effects remains to be assessed in most cases. Although &#x0201C;epigenetic heritability&#x0201D; has been estimated at very low values for several egg quality traits in meat-type quails (Paiva et al., <xref ref-type="bibr" rid="B72">2018b</xref>), an epigenetic heritability of 0.10 for the weight at 7 days of age has been reported (Paiva et al., <xref ref-type="bibr" rid="B71">2018a</xref>). Concurrently, very little is known about the molecular mechanisms involved, especially in poultry (Guerrero-Bosagna et al., <xref ref-type="bibr" rid="B35">2018</xref>). These may include alterations in sperm miRNAs and lncRNAs (Wu et al., <xref ref-type="bibr" rid="B103">2019</xref>), or putative RNA modifications, DNA methylation, and retained histones (Matsushima et al., <xref ref-type="bibr" rid="B62">2019</xref>).</p>
</sec>
<sec id="s5">
<title>Conclusions and Perspectives</title>
<p>To face future challenges, including fluctuations due to climate change and changing farming systems, breeders are under pressure to increase performance and productivity, but also to ensure resilience and reduce resource use and environmental impact. In this context, epigenetic programming is an underestimated lever, as maternal or embryonic nutritional and thermal programming offers promising prospects to improve poultry performance and welfare. Programming the environment of animals (e.g., optimizing the way they are housed and fed) can indeed promote non-genetic factors that may be passed on the subsequent generations. This aspect is particularly important in the poultry industry where, generally, production farms are located all over the world, including in warm climate regions, while breeding farms are concentrated in a few temperate locations. Identifying environmental changes in ancestors that affect offspring traits through the transmission of epigenetic marks would therefore allow breeders to produce commercial animals better adapted to local production environments. In order to implement such fine-tuned practices in the field, additional research is needed in this challenging area to account for the potential variability of breeders and the response of their offspring.</p>
</sec>
<sec sec-type="data-availability" id="s6">
<title>Data Availability Statement</title>
<p>The original contributions presented in the study are included in the article/supplementary material, further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="s7">
<title>Ethics Statement</title>
<p>Ethical review and approval was not required for the animal study because this review cites approved studies.</p>
</sec>
<sec id="s8">
<title>Author Contributions</title>
<p>All authors contributed to the writing of the review.</p>
</sec>
<sec sec-type="funding-information" id="s9">
<title>Funding</title>
<p>CA was funded by the Comit&#x000E9; D&#x000E9;partemental des Landes (CD40), France. AP was funded by the University of Tours, France. Some results on which this review is based on were part of studies funded by INRAE (Department Animal Physiology and Livestock Systems, Eval_Adapt project) and carried out within the UMT framework Integrative Biology Research and Development (BIRD) associating ITAVI and INRAE, by the French Agence Nationale de la Recherche (ANR), Programs ANR-09-JCJC-0015-01 THERMOCHICK, ANR-09-GENM-004 EPIBIRD and ANR-15-CE02-0009-01 QuailHeatE, and by the Comit&#x000E9; Interprofessionnel des Palmip&#x000E8;des &#x000E0; Foie Gras (CIFOG).</p>
</sec>
<sec sec-type="COI-statement" id="conf1">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s10">
<title>Publisher&#x00027;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec> 
</body>
<back>
<ack><p>The authors thank Mireille Morisson (UMR GenPhySE, Toulouse, France) for initial discussions on the review.</p>
</ack>
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