AUTHOR=Bel Mokhtar Naima , Apostolopoulou Georgia , Koumoundouros George , Tzokas Kostas , Toskas Kosmas , Gourzioti Evgenia , Stathopoulou Panagiota , Tsiamis George TITLE=Bacterial community structures and dynamics associated with rotated positioning syndrome in gilthead sea bream (Sparus aurata) larviculture JOURNAL=Frontiers in Aquaculture VOLUME=Volume 2 - 2023 YEAR=2024 URL=https://www.frontiersin.org/journals/aquaculture/articles/10.3389/faquc.2023.1270932 DOI=10.3389/faquc.2023.1270932 ISSN=2813-5334 ABSTRACT=The availability of high-quality gilthead seabream (Sparus aurata) larvae in larviculture represents a major bottleneck to the aquaculture industry. This challenge can be compounded by losses resulting from the emergence of a clinical disorder’s symptomatology. In this study, the observed syndrome included a rotated positioning of the larval sagittal plane and in most cases leading eventually to death. As the microbiome plays a key role in animal health, we examined using amplicon sequencing of the 16S rDNA the bacterial communities associated with S. aurata larvae at different health conditions (healthy and symptomatic) during the early developmental stages along with the contribution of rearing water, organic matter and provided feed in the microbiota. Over the development of larvae, differences were observed in the bacterial composition between healthy and symptomatic larvae as well as between components of the larviculture system. A remarkable presence of members of the Psychrobacter genus was observed in symptomatic larvae with a significant increase at 18dph. The healthy larvae harbor different bacterial profile with a dominance of Vibrio and Bacillus genera during 3-8dph, various members of Alphaproteobacteria during 11-14dph and Marinifilum at 18dph. The rearing water showed a different bacterial profile compared to the other larviculture components, with a slight effect of healthy larvae at 3-8dph. The bacteriome of feeds provided during the rearing of larvae was found to be diverse. Chlorella was mainly dominated by members of Firmicutes, while Rotifer and Artemia were mainly dominated by members of Proteobacteria including different species of Psychrobacter. At 18dph, Artemia feed seems to affect the symptomatic larvae bacteriome, where it enhanced the presence of Psychrobacter spp. Interestingly, the comparative network analysis at 18dph indicated that the bacterial associations in symptomatic larvae were primarily driven by members of the Psychrobacter genus. While various phyla contributed to forming bacterial associations in healthy larvae with different frequencies. Finally, the Gammaproteobacteria/Alphaproteobacteria ratio was found to be related with the health condition of larvae. This study provides valuable information on the microbial diversity in both healthy and symptomatic larvae, which can be used as indicators for monitoring the health status of S. aurata larvae.