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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Cell. Infect. Microbiol.</journal-id>
<journal-title>Frontiers in Cellular and Infection Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Cell. Infect. Microbiol.</abbrev-journal-title>
<issn pub-type="epub">2235-2988</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fcimb.2021.761983</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Cellular and Infection Microbiology</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>The Role of Ku70 as a Cytosolic DNA Sensor in Innate Immunity and Beyond</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Sui</surname>
<given-names>Hongyan</given-names>
</name>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1447421"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Hao</surname>
<given-names>Ming</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/1493054"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Chang</surname>
<given-names>Weizhong</given-names>
</name>
<uri xlink:href="https://loop.frontiersin.org/people/1433907"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Imamichi</surname>
<given-names>Tomozumi</given-names>
</name>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/278678"/>
</contrib>
</contrib-group>
<aff id="aff1">
<institution>Laboratory of Human Retrovirology and Immunoinformatics, Frederick National Laboratory for Cancer Research</institution>, <addr-line>Frederick, MD</addr-line>, <country>United States</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Petro Starokadomskyy, University of Texas Southwestern Medical Center, United States</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Tengchuan Jin, University of Science and Technology of China, China; Marina Gottikh, Lomonosov Moscow State University, Russia</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Hongyan Sui, <email xlink:href="mailto:suih@mail.nih.gov">suih@mail.nih.gov</email>; Tomozumi Imamichi, <email xlink:href="mailto:timamichi@mail.nih.gov">timamichi@mail.nih.gov</email>
</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Microbes and Innate Immunity, a section of the journal Frontiers in Cellular and Infection Microbiology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>21</day>
<month>10</month>
<year>2021</year>
</pub-date>
<pub-date pub-type="collection">
<year>2021</year>
</pub-date>
<volume>11</volume>
<elocation-id>761983</elocation-id>
<history>
<date date-type="received">
<day>20</day>
<month>08</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>06</day>
<month>10</month>
<year>2021</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2021 Sui, Hao, Chang and Imamichi</copyright-statement>
<copyright-year>2021</copyright-year>
<copyright-holder>Sui, Hao, Chang and Imamichi</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>Human Ku70 is a well-known endogenous nuclear protein involved in the non-homologous end joining pathway to repair double-stranded breaks in DNA. However, Ku70 has been studied in multiple contexts and grown into a multifunctional protein. In addition to the extensive functional study of Ku70 in DNA repair process, many studies have emphasized the role of Ku70 in various other cellular processes, including apoptosis, aging, and HIV replication. In this review, we focus on discussing the role of Ku70 in inducing interferons and proinflammatory cytokines as a cytosolic DNA sensor. We explored the unique structure of Ku70 binding with DNA; illustrated, with evidence, how Ku70, as a nuclear protein, responds to extracellular DNA stimulation; and summarized the mechanisms of the Ku70-involved innate immune response pathway. Finally, we discussed several new strategies to modulate Ku70-mediated innate immune response and highlighted some potential physiological insights based on the role of Ku70 in innate immunity.</p>
</abstract>
<kwd-group>
<kwd>Ku70</kwd>
<kwd>Ku heterodimer</kwd>
<kwd>cytosolic DNA sensing</kwd>
<kwd>innate immunity</kwd>
<kwd>interferons</kwd>
<kwd>HIV replication</kwd>
</kwd-group>
<counts>
<fig-count count="4"/>
<table-count count="1"/>
<equation-count count="0"/>
<ref-count count="217"/>
<page-count count="18"/>
<word-count count="9672"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>Innate immunity includes diverse areas of host defense response to pathogen invasion, such as bacterial or viral infection. In this system, pattern recognition receptors (PRRs) expressed in host cells recognize the conserved pathogen-associated molecular patterns (PAMPs) which are derived from microbes and then mediate innate immune responses (<xref ref-type="bibr" rid="B119">Medzhitov and Janeway, 1997</xref>; <xref ref-type="bibr" rid="B120">Medzhitov and Janeway, 2000</xref>; <xref ref-type="bibr" rid="B4">Akira et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B140">Pichlmair and Reis e Sousa, 2007</xref>; <xref ref-type="bibr" rid="B125">Mogensen, 2009</xref>; <xref ref-type="bibr" rid="B179">Takeuchi and Akira, 2009</xref>; <xref ref-type="bibr" rid="B207">Yoneyama and Fujita, 2010</xref>). Detection of pathogenic cytosolic nucleic acids: double-stranded (ds) or single-stranded (ss) DNA and RNA is essential to initiate innate immunity. PRR families include the retinoic acid-inducible gene I (RIG-I)-like receptors, toll-like receptors (TLRs), and a diverse member of cytosolic DNA sensors (<xref ref-type="bibr" rid="B24">Bowie and Haga, 2005</xref>; <xref ref-type="bibr" rid="B88">Kaisho and Akira, 2006</xref>; <xref ref-type="bibr" rid="B205">Yoneyama and Fujita, 2008</xref>; <xref ref-type="bibr" rid="B18">Beutler, 2009</xref>; <xref ref-type="bibr" rid="B89">Kawai and Akira, 2009</xref>; <xref ref-type="bibr" rid="B206">Yoneyama and Fujita, 2009</xref>; <xref ref-type="bibr" rid="B14">Barber, 2011</xref>; <xref ref-type="bibr" rid="B90">Keating et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B182">Thompson et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B134">Paludan and Bowie, 2013</xref>; <xref ref-type="bibr" rid="B48">Dempsey and Bowie, 2015</xref>). Once PAMPs are sensed by PRRs, the recognition subsequently mediates intracellular signaling pathways and activates transcription factors, interferon (IFN) regulatory factors (IRFs) or nuclear factor &#x3ba;B (NF-&#x3ba;B), which in turn leads to the increased production of antiviral interferons and proinflammatory cytokines (<xref ref-type="bibr" rid="B105">Lee and Kim, 2007</xref>; <xref ref-type="bibr" rid="B125">Mogensen, 2009</xref>).</p>
<p>DNA is a potent trigger of innate immune responses in host cells (<xref ref-type="bibr" rid="B161">Sharma and Fitzgerald, 2011</xref>). Many studies have emphasized the importance of cytosolic DNA sensing in the innate immune response against invading pathogens. The DNA-mediated innate immune response includes diverse signaling pathways leading to the production of IFN-&#x3b1;, IFN-&#x3b2;, interleukin (IL)-1&#x3b2;, or IL-18 (<xref ref-type="bibr" rid="B35">Christensen and Paludan, 2016</xref>). For instance, the DNA-dependent activator of IFN-regulatory factors (DAI) (<xref ref-type="bibr" rid="B178">Takaoka, 2007</xref>) is the first identified DNA sensor to recognize dsDNA and activate the STING-TBK1-IRF3 signaling pathway. After that, gamma-interferon-inducible protein (IFI16) (<xref ref-type="bibr" rid="B188">Unterholzner et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B128">Monroe et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B183">Thompson et&#xa0;al., 2014</xref>) and DEAD-box helicase 41 (DDX41) (<xref ref-type="bibr" rid="B215">Zhang et&#xa0;al., 2011c</xref>) were found as cytosolic DNA sensors in diverse cellular processes to recognize DNA. Leucine-rich repeat flightless-interacting protein 1 (LRRFIP1), another discovered cytosolic DNA sensor, binds dsDNA and activates &#x3b2;-catenin to induce downstream signaling (<xref ref-type="bibr" rid="B204">Yang et&#xa0;al., 2010</xref>). DEAH box protein 9 (DHX9) and DHX36 bind with dsDNA in dendritic cells and activate NF-&#x3ba;B through myeloid differentiation primary response 88 (MyD88) (<xref ref-type="bibr" rid="B94">Kim et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B212">Zhang et&#xa0;al., 2011b</xref>). More recently, cyclic GMP-AMP Synthase (cGAS) has been identified as a cytosolic DNA sensor (<xref ref-type="bibr" rid="B67">Gao et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B174">Sun et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B30">Cai et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B214">Zhang et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B201">Xia et&#xa0;al., 2016</xref>). Once cGAS detects dsDNA, it undergoes a conformational change to open the catalytic pocket followed by synthesis of cGAMP from ATP and GTP: a potent activator of the STING-TBK1-IRF3 signaling pathway. In addition to the induction pathway of IFNs, Absent in melanoma 2 (AIM2) has been found to associate with cytosolic DNA and activate inflammasomes by recruiting apoptosis-associated speck-like protein (ASC) and pro-caspase-1, and then produce mature forms of IL-1&#x3b2; and IL-18 (<xref ref-type="bibr" rid="B28">Burckstuummer, 2009</xref>; <xref ref-type="bibr" rid="B63">Fernandes-Alnemri et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B79">Hornung, 2009</xref>).</p>
<p>The DNA-mediated innate immune response is not restricted to the induction of type I IFNs and proinflammatory cytokines: cytosolic DNA also induces type III IFNs. Type III IFNs are new members of the IFN family (<xref ref-type="bibr" rid="B9">Ank et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B8">Ank and Paludan, 2009</xref>; <xref ref-type="bibr" rid="B51">Donnelly and Kotenko, 2010</xref>; <xref ref-type="bibr" rid="B102">Kotenko, 2011</xref>; <xref ref-type="bibr" rid="B177">Syedbasha and Egli, 2017</xref>). Type III IFNs are also called IFN-&#x3bb;s, which include IFN-&#x3bb;1, IFN-&#x3bb;2, IFN-&#x3bb;3 (also known as IL-29, IL-28A, and IL-28B, respectively) and IFN-&#x3bb;4 (<xref ref-type="bibr" rid="B9">Ank et&#xa0;al., 2006</xref>; <xref ref-type="bibr" rid="B189">Uz&#xe9; and Monneron, 2007</xref>; <xref ref-type="bibr" rid="B8">Ank and Paludan, 2009</xref>; <xref ref-type="bibr" rid="B102">Kotenko, 2011</xref>; <xref ref-type="bibr" rid="B22">Booth and George, 2013</xref>; <xref ref-type="bibr" rid="B112">Lu et&#xa0;al., 2015</xref>). Compared with type I IFNs, they use a different heterodimeric receptor complex (IFN-&#x3bb;R1/IL-10R2) to get into the cells (<xref ref-type="bibr" rid="B8">Ank and Paludan, 2009</xref>; <xref ref-type="bibr" rid="B102">Kotenko, 2011</xref>). Similar to type I IFNs, stimulation by virus infection or TLR agonist induces type III IFNs (<xref ref-type="bibr" rid="B103">Kotenko et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B36">Coccia et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B165">Spann et&#xa0;al., 2004</xref>). Of note, Donnelly et&#xa0;al. found that the gene encoding the mouse ortholog of human IFNL1 contains a stop codon in the region of exon 1 and lacks the entire exon 2. Therefore, the gene Ifnl1 in mice does not encode a functional IFN-&#x3bb;1 protein (<xref ref-type="bibr" rid="B51">Donnelly and Kotenko, 2010</xref>).</p>
<p>Ku70 and Ku80, proteins with molecular weight (MW) of 70 KDa and 80 KDa, respectively, are the essential components in the non-homologous end-joining (NHEJ) pathway. They are first identified in humans (<xref ref-type="bibr" rid="B122">Mimori et&#xa0;al., 1981</xref>). Ku70 is encoded by the X-ray repair cross-complementing protein (<italic>XRCC</italic>) 6 gene located on chromosome 22, and Ku80 is encoded by the <italic>XRCC5</italic> gene on chromosome 2. Hetero dimerization of Ku70 and Ku80 is essential for the stability of each protein. The lacking of one subunit leads to dramatically decreased intracellular level of the other subunit, suggesting that most Ku70 and Ku80 exist as a heterodimer (<xref ref-type="bibr" rid="B132">Nussenzweig et&#xa0;al., 1996</xref>; <xref ref-type="bibr" rid="B76">Gu et&#xa0;al., 1997</xref>). Such functional homologs have been identified in some prokaryotic lineages and almost all eukaryotes, including vertebrates, insects, and fungi (<xref ref-type="bibr" rid="B53">Dynan and Yoo, 1998</xref>; <xref ref-type="bibr" rid="B11">Aravind and Koonin, 2001</xref>; <xref ref-type="bibr" rid="B23">Bowater and Doherty, 2006</xref>). The Ku70/Ku80 heterodimer (so-called Ku) and a catalytic kinase subunit (DNA-PKcs) are often referred to as the subunit of the DNA-dependent protein kinase (DNA-PK) complex, which assembles in response to DNA double-strand breaks to repair the damaged DNA <italic>via</italic> NHEJ pathway (<xref ref-type="bibr" rid="B61">Fell and Schild-Poulter, 2015</xref>). The region between residues 439&#x2013;592 at Ku80 C-terminus interacts with DNA-PKcs (<xref ref-type="bibr" rid="B68">Gell and Jackson, 1999</xref>; <xref ref-type="bibr" rid="B164">Singleton et&#xa0;al., 1999</xref>; <xref ref-type="bibr" rid="B46">Davis et&#xa0;al., 2013</xref>) and promotes the autophosphorylation of DNA-PKcs at DNA double-stranded breaks.</p>
<p>Ku70 and Ku80 are predominantly observed in the nucleus (<xref ref-type="bibr" rid="B97">Koike, 2002</xref>). Following translation of each protein in the cytosol, the Ku subunits can translocate from the cytoplasm into the nucleus together (<xref ref-type="bibr" rid="B97">Koike, 2002</xref>), or independently (<xref ref-type="bibr" rid="B98">Koike et&#xa0;al., 1999a</xref>), since each subunit possesses its own nuclear localization signal (NLS) (<xref ref-type="bibr" rid="B100">Koike et&#xa0;al., 2000</xref>). However, further functional studies have reported that Ku70 is not only involved in nuclear activities like DNA repair, transcription, and replication but is also involved in multiple cytosolic activities. Bax, a cytoplasmic protein, has been discovered to interact with Ku70, and this Ku70-Bax binding is indicated to inhibit Bax-mediated apoptosis (<xref ref-type="bibr" rid="B37">Cohen et&#xa0;al., 2004</xref>). In addition, many studies have implicated that cytosolic Ku has been shown to serve as a PRR that recognizes viral DNA in human cells and then induces type I and type III interferons or proinflammatory cytokines (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>; <xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B109">Li et&#xa0;al., 2016b</xref>; <xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B195">Wang et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B29">Burleigh et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B194">Wang et&#xa0;al., 2021</xref>). This article summarized and discussed the Ku70-mediated innate immune response in detail and then highlighted potential strategies to modulate the innate immune cascades. The homology modeling for Ku70 and Ku80 is illustrated in <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>, the diverse functions of Ku70 are listed in <xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>. The studies for Ku70 related to innate immunity are summarized in <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref> and illustrated in <xref ref-type="fig" rid="f3">
<bold>Figure&#xa0;3</bold>
</xref>. Beyond the role of Ku70 in innate immunity, roles of Ku70 in viral life cycle of Human Immune deficiency virus (HIV) (<xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>) and in bacterial pathogen invasion are reviewed and discussed.</p>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>Schematic of Ku70/80 heterodimer domains and ribbon diagrams. <bold>(A)</bold> Domains in Ku70 and Ku80. In Ku70, the vWA domain is colored in orange, the DNA-binding domain is colored in firebrick, the SAP domain is colored in pink, the nuclear localization sequence (NLS: 539&#x2013;556) is colored in yellow, and other parts are colored in light pink. In Ku80, the vWA domain is colored in purple, the DNA-binding domain is colored in blue, the c-terminal domain of Ku80 is colored in green, the NLS (561-569) of Ku80 is colored in black, and other parts are colored in light grey. <bold>(B)</bold> Unbound Ku70/Ku80 heterodimer with a view of Ku70 NLS (yellow) in the front (left panel). The range in the Ku70 model is from 35&#x2013;609 amino acids, where the first 34 residues in the N-terminal domain (NTD) are truncated. The range in the Ku80 model is from 6&#x2013;541 amino acids, where the first 5 residues in the NTD and residues 542&#x2013;732 in the C-terminal domain (CTD) are truncated. The CTD domain of Ku80 is colored in green, and the corresponding NLS (561&#x2013;569) is colored in black (right panel). <bold>(C)</bold> The structure model of the Ku70/Ku80 heterodimer bound with DNA. The left and the right panel demonstrate the side and top view, respectively, and bound DNA is colored in dark grey.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fcimb-11-761983-g001.tif"/>
</fig>
<fig id="f2" position="float">
<label>Figure&#xa0;2</label>
<caption>
<p>The overview of functions of Ku70/80 heterodimer in various cellular contexts. Ku70/80&#x2019;s involvement in multiple cellular activities with indicated cellular localization and critical mediators. This illustration was created by using BioRender. The figure was adapted from the 2021 review by Abbasi et al. (<xref ref-type="bibr" rid="B1">Abbasi et&#xa0;al., 2021</xref>).</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fcimb-11-761983-g002.tif"/>
</fig>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>List of studies about Ku70-involved innate immune response.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="left">Sensor proteins</th>
<th valign="top" align="left">The source of nucleotides</th>
<th valign="top" align="left">Host cells</th>
<th valign="top" align="left">Signaling pathway</th>
<th valign="top" align="left">Induced cytokines</th>
<th valign="top" align="left">
<italic>In vivo</italic>
</th>
<th valign="top" align="left">References</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Ku70</td>
<td valign="top" align="left">Plasmid DNA, bacterial DNA. HSV-2G, HSV-1</td>
<td valign="top" align="left">HEK, RD, THP-1, macrophages</td>
<td valign="top" align="left">STING-TBK1-IRF3, IRF1, and IRF7 pathway</td>
<td valign="top" align="left">IFN-&#x3bb;1</td>
<td valign="top" align="left">N/A</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>;<break/> <xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>;<break/>
<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">DNA-PK</td>
<td valign="top" align="left">VACV, E. coli, ISD, HSV-1, MVA</td>
<td valign="top" align="left">Fibroblasts, MEF</td>
<td valign="top" align="left">STING-TBK1-IRF3</td>
<td valign="top" align="left">IFN-&#x3b2;, CXCL10, IL-6</td>
<td valign="top" align="left">Mice</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>;<break/>
<xref ref-type="bibr" rid="B137">Peters et&#xa0;al., 2013</xref>;<break/>
<xref ref-type="bibr" rid="B156">Scutts et&#xa0;al., 2018</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Ku70</td>
<td valign="top" align="left">pAAV-HBV plasmid, HBV</td>
<td valign="top" align="left">Liver-derived cells: Sk-Hep-1, Hep G2, Huh7, primary HSECs</td>
<td valign="top" align="left">DNA-PKcs and PARP1-IRF1</td>
<td valign="top" align="left">CCL3, CCL5</td>
<td valign="top" align="left">HBV-infected human patients</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B109">Li et&#xa0;al., 2016b</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Ku70</td>
<td valign="top" align="left">HTLV-1 RTI ssDNA90</td>
<td valign="top" align="left">HeLa cells, PMA-THP-1</td>
<td valign="top" align="left">STING-TBK1-IRF3</td>
<td valign="top" align="left">IFN-&#x3b2;, IFN-&#x3bb;, and TNF-&#x3b1;</td>
<td valign="top" align="left">N/A</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B195">Wang et&#xa0;al., 2017</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">DNA-PK</td>
<td valign="top" align="left">CT DNA</td>
<td valign="top" align="left">Human U937 cells,<break/>primary human hepatocytes, human fibroblasts</td>
<td valign="top" align="left">HSPA8-IRF3 (STING-independent sensing pathway)</td>
<td valign="top" align="left">IFN-&#x3b2;</td>
<td valign="top" align="left">N/A</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B29">Burleigh et&#xa0;al., 2020</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Ku70/Ku80</td>
<td valign="top" align="left">ISD</td>
<td valign="top" align="left">Jurkat T cells, aged CD4+ T cells</td>
<td valign="top" align="left">ZAK-AKT-mTOR</td>
<td valign="top" align="left">IL-2, IFN-&#x3b3;, T-cell proliferation</td>
<td valign="top" align="left">Mice</td>
<td valign="top" align="left"> (<xref ref-type="bibr" rid="B194">Wang et&#xa0;al., 2021</xref>)</td>
</tr>
</tbody>
</table>
</table-wrap>
<fig id="f3" position="float">
<label>Figure&#xa0;3</label>
<caption>
<p>The involvement of Ku70 as a cytosolic DNA sensor to activate the innate immune response. Ku70 is identified as a cytosolic DNA sensor that induces type III IFNs through a STING-TBK1-IRF3, IRF1, and IRF7 signaling pathway. In this signaling pathway, cytoplasmic translocation of Ku70 is an initial and essential step (black arrows) (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>; <xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>); Ku70 and Ku80, together with DNA-PKcs (DNA-PK), are also involved in a STING-dependent (<xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>) (solid arrow) and STING-independent (<xref ref-type="bibr" rid="B29">Burleigh et&#xa0;al., 2020</xref>) (dashed arrow) pathway to induce type I IFNs (red arrows). Ku70 is reported to sense HTLV-1 transcription intermediate product ssDNA90 and interacts with STING to induce IFNs and inflammatory cytokines, thereby modulating HTLV-1 replication (<xref ref-type="bibr" rid="B195">Wang et&#xa0;al., 2017</xref>) (brown arrows). The Ku70/80 heterodimer recognizes HBV-infection-derived DNA, then activates DNA-PKcs and PARP1 to induce CCL3 and CCL5 inflammatory cytokines (<xref ref-type="bibr" rid="B109">Li et&#xa0;al., 2016b</xref>) (green arrows). DNA-PK (the complex of DNA-PKcs, Ku70, and Ku80) senses aging-related cytoplasmic DNA in CD4+ T cells. This DNA sensing then induces T-cell proliferation and activation, as well as autoimmunity through the ZAK-AKT-mTOR pathway (<xref ref-type="bibr" rid="B194">Wang et&#xa0;al., 2021</xref>) (blue arrows). This illustration was created by using BioRender.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fcimb-11-761983-g003.tif"/>
</fig>
<fig id="f4" position="float">
<label>Figure&#xa0;4</label>
<caption>
<p>Ku70 is an indispensable host cellular factor in the early and late stages of the HIV-1 replication cycle. The interaction of IN with Ku70 during HIV reverse transcription prevents IN from degradation by the K48-linked Ub proteasome pathway. The interaction between Ku70 and IN decreases the modification level of IN by Ub in the cells. During the integration step, the initial binding of Ku70 and HIV-1 IN facilitates the recruitment of other members of the DNA-PK complex to the post-integration site. Then Ku70 serves as a member of DNA-PK and participates in the DNA gaps repair process through the NHEJ pathway, thereby completing the integration of viral DNA into the cell genome and enabling the HIV-1 viral replication. Ku70 is also packaged into HIV particles as early as its assembly stage and becomes part of HIV virions, and this process is mediated by HIV IN.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fcimb-11-761983-g004.tif"/>
</fig>
</sec>
<sec id="s2">
<title>Structure and Diverse Functions of Ku70 and Ku80</title>
<p>Ku70 forms a heterodimer with Ku80. Homology modeling for human Ku70 and Ku80, the proteins alone, and the complex with an oligo DNA substrate are shown in <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>. The entire structure of Ku70/Ku80 was not crystallized (<xref ref-type="bibr" rid="B192">Walker et&#xa0;al., 2001</xref>) due to the difficult experimental conditions of solving regions such as the Ku70 NLS. The homology modeling technique was used here to predict such missing segments. The hetero-oligomeric modeling pipeline implemented in SWISS-MODEL (<xref ref-type="bibr" rid="B19">Biasini et&#xa0;al., 2014</xref>) was used to predict the Ku70/Ku80 dimer structure. The target sequences of Ku70 (XRCC6, UniProt: P12956) and Ku80 (XRCC5, UniProt: P13010) were used as the input, and the crystal structure (PDB ID: 1JEQ (<xref ref-type="bibr" rid="B192">Walker et&#xa0;al., 2001</xref>)) was retrieved as the template for the final modeling. The target modeling segments show high sequence identities with their respective templates when aligned with those templates (95% for Ku70 and 97% for Ku80). Finally, the Ku70 structure was modeled, including 575 amino acids with the first 34 amino acids truncated, while the Ku80 structure with amino acids 6&#x2013;541 was modeled. To create the C-terminal domain of the Ku80 model, we used the PDB ID of 6ZHE (<xref ref-type="bibr" rid="B31">Chaplin et&#xa0;al., 2021</xref>) as the template due to its relative completeness in this domain (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1B</bold>
</xref>). For incorporating the DNA coordinate into the Ku70/Ku80 model (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1C</bold>
</xref>), the PDB structure of 1JEY (<xref ref-type="bibr" rid="B192">Walker et&#xa0;al., 2001</xref>) was used as the anchor for fitting the model. Both the Ku70 and Ku80 protein possess a three-domain topology, including an N-terminal vWA (von Willebrand factor A) domain, a DNA-binding domain, and a C-terminal arm (<xref ref-type="bibr" rid="B192">Walker et&#xa0;al., 2001</xref>) (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1A</bold>
</xref>). The homology modeling of Ku heterodimer suggested a quasi-symmetric basket-like molecule with a narrow-preformed ring, which facilitates the binding of DNA to Ku (<xref ref-type="bibr" rid="B192">Walker et&#xa0;al., 2001</xref>) (<xref ref-type="fig" rid="f1">
<bold>Figures&#xa0;1B, C</bold>
</xref>).</p>
<p>The N-terminal vWA domains of Ku70 or Ku80 are composed of a six-stranded &#x3b2;-sheet in a Rossman fold (<xref ref-type="bibr" rid="B192">Walker et&#xa0;al., 2001</xref>). Disrupting the vWA domains in yeast Ku70/80 has been found to impair the function of Ku in DNA repair and telomere regulation (<xref ref-type="bibr" rid="B143">Ribes-Zamora et&#xa0;al., 2007</xref>). Although the amino edge of the vWA domain locates close to the DNA-binding groove, the vWA domain is not required for DNA binding. However, the Ku vWA domains may facilitate protein-protein interactions. For instance, the vWA domain of Ku80 has been found to interact with APLF, an NHEJ repair protein important for recruiting other repair factors (<xref ref-type="bibr" rid="B75">Grundy et&#xa0;al., 2013</xref>). So, the N-terminal vWA domains have minimal contribution to heterodimerization or DNA binding but are potentially involved in protein-protein interactions.</p>
<p>Meanwhile, the middle domain consists of a seven-stranded anti-parallel &#x3b2;-barrel and plays an essential role in Ku DNA binding and heterodimerization (<xref ref-type="bibr" rid="B192">Walker et&#xa0;al., 2001</xref>). Heterodimerization leads to a positively charged DNA-binding ring that fits sterically around the minor and major DNA grooves. Ku threads inwards on DNA like a nut threaded onto a bolt, with Ku70 positioned close and Ku80 far away to the DNA end (<xref ref-type="bibr" rid="B209">Yoo et&#xa0;al., 1999</xref>; <xref ref-type="bibr" rid="B50">Doherty and Jackson, 2001</xref>; <xref ref-type="bibr" rid="B1">Abbasi et&#xa0;al., 2021</xref>). Ku binds to dsDNA ends, 5&#x2032; and 3&#x2032; overhangs, or blunt ends with a higher binding affinity (Kd&#x2009;=&#x2009;10<sup>&#x2013;9</sup> M). And it has a much lower binding affinity with circular DNA or the ends of single-stranded DNA (ss DNA) (<xref ref-type="bibr" rid="B61">Fell and Schild-Poulter, 2015</xref>).</p>
<p>C terminal regions of Ku contain a flexible linker and a globular structural domain (<xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>). The C-terminal region of Ku70 contains a SAP (SAF-A/B, Acinus, and PIAS) domain encoded by residues 559&#x2013;609 (<xref ref-type="bibr" rid="B192">Walker et&#xa0;al., 2001</xref>). Studies on other SAP domain proteins have implicated that SAP domains can bind DNA (<xref ref-type="bibr" rid="B71">G&#xf6;hring et&#xa0;al., 1997</xref>; <xref ref-type="bibr" rid="B176">Suzuki et&#xa0;al., 2009</xref>). Using a pair of even shorter versions of Ku70, the Ku70_251-438 and Ku70_439-609 truncated mutants, Anisenko et&#xa0;al. have determined that the dsDNA is bound within the C-terminal part of the protein containing SAP domain (<xref ref-type="bibr" rid="B7">Anisenko et&#xa0;al., 2017b</xref>). While DNA binding to Ku, the SAP domain undergoes displacement, making itself close to the DNA-binding region of the Ku heterodimer (<xref ref-type="bibr" rid="B145">Rivera-Calzada et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B114">Makowski et&#xa0;al., 2016</xref>). Even the exact function of Ku70-SAP has not been completely investigated yet, the helical C-terminal arms of Ku contribute to heterodimerization and stabilize the interaction of Ku to DNA (<xref ref-type="bibr" rid="B192">Walker et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B91">Keijzers, 2018</xref>).</p>
<p>Notably, Ku70 and Ku80 per se possess an NLS in the molecule (as shown in <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref> with Ku70 NLS in yellow and Ku80 NLS in black). The various NLS are classified into two types based on the pattern of molecular sequences: (1) a single cluster of basic amino acids, such as the NLS of the SV40 T-antigen, and (2) a bipartite type in which two basic amino acid regions are separated by a stretch of approximately 10 non-basic amino acids (<xref ref-type="bibr" rid="B74">G&#xf6;rlich and Mattaj, 1996</xref>). The Ku70 NLS belongs to type 2, and the sequence of Ku70 NLS is highly conserved among human, mouse, rat, hamster, and chicken (<xref ref-type="bibr" rid="B99">Koike et&#xa0;al., 1999b</xref>). While importing into the nucleus of the cells, the Ku70 NLS is recognized by the nuclear targeting complex, PTAC58, and PTAC97 (<xref ref-type="bibr" rid="B99">Koike et&#xa0;al., 1999b</xref>). Given that Ku70 is an NLS-possessing protein, it has been found predominately in the nucleus of unstimulated cells, such as HeLa, HEK (human embryonic kidney cells), and rhabdomyosarcoma (RD) cells (<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>).</p>
<p>Consistent with the illustrated structure, many studies have suggested that Ku possesses unusual DNA-binding properties, binding potently to the ends of dsDNA molecules in a sequence-independent manner. The unusual end-binding properties are required for various nuclear processes, such as NHEJ DNA repair (<xref ref-type="bibr" rid="B40">Critchlow and Jackson, 1998</xref>; <xref ref-type="bibr" rid="B49">Dobbs et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B141">Radhakrishnan et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B121">Menon and Povirk, 2016</xref>; <xref ref-type="bibr" rid="B155">Scully et&#xa0;al., 2019</xref>), V(D)J recombination of immunoglobin (<xref ref-type="bibr" rid="B85">Jackson and Jeggo, 1995</xref>; <xref ref-type="bibr" rid="B65">Fugmann et&#xa0;al., 2000</xref>; <xref ref-type="bibr" rid="B16">Bassing et&#xa0;al., 2002</xref>), telomerase maintenance (<xref ref-type="bibr" rid="B17">Bertuch and Lundblad, 2003</xref>; <xref ref-type="bibr" rid="B83">Indiviglio and Bertuch, 2009</xref>; <xref ref-type="bibr" rid="B200">Wood et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B162">Shay and Wright, 2019</xref>; <xref ref-type="bibr" rid="B171">Sui et&#xa0;al., 2020</xref>), transcription (<xref ref-type="bibr" rid="B110">Li et&#xa0;al., 1995</xref>; <xref ref-type="bibr" rid="B70">Giffin et&#xa0;al., 1996</xref>; <xref ref-type="bibr" rid="B133">Ono et&#xa0;al., 1996</xref>; <xref ref-type="bibr" rid="B69">Giffin et&#xa0;al., 1997</xref>; <xref ref-type="bibr" rid="B53">Dynan and Yoo, 1998</xref>; <xref ref-type="bibr" rid="B124">Mo and Dynan, 2002</xref>; <xref ref-type="bibr" rid="B27">Bunch et&#xa0;al., 2015</xref>), DNA damage response (<xref ref-type="bibr" rid="B193">Wang et&#xa0;al., 2000</xref>; <xref ref-type="bibr" rid="B217">Zhou and Elledge, 2000</xref>; <xref ref-type="bibr" rid="B147">Rouse and Jackson, 2002</xref>; <xref ref-type="bibr" rid="B78">Harper and Elledge, 2007</xref>; <xref ref-type="bibr" rid="B84">Jackson and Bartek, 2009</xref>; <xref ref-type="bibr" rid="B60">Fell and Schild-Poulter, 2012</xref>; <xref ref-type="bibr" rid="B131">Nowsheen and Yang, 2012</xref>; <xref ref-type="bibr" rid="B20">Blackford and Jackson, 2017</xref>), RNA biology (<xref ref-type="bibr" rid="B208">Yoo and Dynan, 1998</xref>; <xref ref-type="bibr" rid="B138">Peterson et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B166">Stellwagen et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B184">Ting et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B139">Pfingsten et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B104">Lamaa et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B211">Zhang et&#xa0;al., 2016b</xref>; <xref ref-type="bibr" rid="B52">Dutertre and Vagner, 2017</xref>; <xref ref-type="bibr" rid="B160">Shao et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B181">Thapar et&#xa0;al., 2020</xref>), and DNA replication (<xref ref-type="bibr" rid="B15">Barnes and Rio, 1997</xref>; <xref ref-type="bibr" rid="B159">Shao et&#xa0;al., 1999</xref>; <xref ref-type="bibr" rid="B130">Novac et&#xa0;al., 2001</xref>; <xref ref-type="bibr" rid="B39">Cosgrove et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B117">Matheos et&#xa0;al., 2002</xref>; <xref ref-type="bibr" rid="B153">Schild-Poulter et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B135">Park et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B142">Rampakakis et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B123">Miyoshi et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B64">Foster et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B2">Abdelbaqi et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B149">S&#xe1;nchez and Russell, 2015</xref>; <xref ref-type="bibr" rid="B180">Teixeira-Silva et&#xa0;al., 2017</xref>). Such unusual DNA-binding properties also facilitate Ku70&#x2019;s activities in the cytoplasm of the cells. Those activities include participating in Bax-mediated apoptosis (<xref ref-type="bibr" rid="B37">Cohen et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B72">Gomez et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B118">Mazumder et&#xa0;al., 2007</xref>; <xref ref-type="bibr" rid="B93">Kim et&#xa0;al., 2014</xref>) and serving as a cytosolic DNA sensor to activate the DNA-mediated innate immune response. An overview of Ku70/80 heterodimer functions in the various cellular processes is illustrated in <xref ref-type="fig" rid="f2">
<bold>Figure&#xa0;2</bold>
</xref>. In the following paragraphs, we will discuss roles of Ku70 in innate immunity, aging-related cytoplasmic DNA sensing, HIV replication and bacterial invasion in detail.</p>
</sec>
<sec id="s3">
<title>Ku70 is Identified as a Novel Cytosolic DNA Sensor That Mediates Innate Immune Responses</title>
<p>Our lab previously reported, for the first time, that Ku70 is a novel DNA sensor to induce expression of IFN-&#x3bb;1 rather than that of type-I IFNs (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>). Plasmid DNA transfection or DNA virus infection-mediated IFN-&#x3bb;1 induction was detected in HEK cells, RD cells, monocyte-derived macrophages, immature dendric cells, and&#x2014;with a much lesser level&#x2014;HeLa cells (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>). These results indicated that the Ku70-mediated IFN-&#x3bb;1 induction is consistently presented in multiple cell types.</p>
<p>Different forms of DNA transfection (e.g., single-stranded DNA, fragmented human genomic DNA, and bacterial DNA) and infection of DNA virus induce IFN-&#x3bb;1 (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>); IFN-&#x3bb;1 mRNA was induced by both supercoiled or linearized forms of DNA plasmids. However, the linearized plasmid DNA significantly enhanced activation. This result was consistently supported by the property of Ku, which detects the end structure of DNA. Zhang et al. confirmed that over 500 bp of DNA triggers IFN-&#x3bb;1 induction with the dependency of DNA length. By contrast, the production of IFN-&#x3bb;1 was not detected with the transfection of DNA that was only 50 bp in length (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>). One study demonstrated that titration of Ku to a fixed amount of linear dsDNA fragments produced ladders of shifted bands, which are proportional to the length of DNA. This data implicated that many Ku heterodimers bind to multiple sites on one dsDNA in a sequence-independent pattern (<xref ref-type="bibr" rid="B21">Blier et&#xa0;al., 1993</xref>). Based on those Ku properties, it was apparent that Ku70 induces activation of IFN-&#x3bb;1 and that Ku70 recognizes intracellular DNA by DNA transfection or infection with a DNA virus, such as herpes simplex virus (HSV) type 1 (HSV-1) or type 2 (HSV-2), without any restriction in structure or sequence (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>).</p>
<p>In addition to the fact that Ku70 senses DNA to induce type III IFNs, subsequent other studies indicated that Ku70 perse, or Ku70 in Ku70/Ku80 heterodimer, or Ku70 in the DNA-PK complex involves in the induction of type I IFNs and other inflammatory cytokines directly or indirectly. For example, Ku70 has also been reported to detect human T-lymphotropic virus type 1 (HTLV-1) reverse intermediate product ssDNA90 and induce IFN-&#x3b1;, IFN-&#x3b2;, IFN-&#x3bb;, and RANTES (<xref ref-type="bibr" rid="B195">Wang et&#xa0;al., 2017</xref>). Additionally, the Ku70/Ku80 heterodimer senses the <italic>in vitro</italic> adenovirus-delivered hepatitis B virus (HBV) DNA and induces CCL3 and CCL5, thereby implicating that Ku70 modulates HBV replication (<xref ref-type="bibr" rid="B109">Li et&#xa0;al., 2016b</xref>). More interestingly, a recent study suggested that the Ku70/80 complex senses cytoplasmic DNA in aged CD4<sup>+</sup> T cells and that this detection potentiated T-cell activation and aging-related autoimmune responses (<xref ref-type="bibr" rid="B194">Wang et&#xa0;al., 2021</xref>). Furthermore, Ferguson et al. reported that DNA-PK, a heterotrimeric protein complex composed of Ku70, Ku80, and DNA-PKcs, is able to activate downstream STING-TBK1-IRF3 signaling pathway when it recognizes foreign DNA (<xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>). It has been further demonstrated that DNA-PK co-localizes with vaccinia virus (VACV) DNA during VACV infection. Virus infection-mediated IFN response is aborted when the components of DNA-PK were knocked-out (<xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>).</p>
<p>Ku70, Ku protein, or DNA-PK have been implicated in having a role in sensing a variety of DNA or DNA viruses without restrictions. More importantly, many other DNA sensors, such as cGAS, require binding of double-stranded DNA to activate the sensor protein: a conformation change, thereby activating downstream signaling (<xref ref-type="bibr" rid="B30">Cai et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B48">Dempsey and Bowie, 2015</xref>; <xref ref-type="bibr" rid="B201">Xia et&#xa0;al., 2016</xref>). However, the Ku protein or DNA-PK complex does not have such conformational restriction; therefore, the Ku/DNA-PK-mediated innate immune response may become a perfect complementary pathway in the host defense system when other DNA-sensing pathways are impaired.</p>
</sec>
<sec id="s4">
<title>The Downstream Signaling Pathway of Ku70</title>
<p>Many studies have indicated that Ku70, as a cytosolic DNA sensor, binds with DNA and mediates the downstream signaling pathway. However, &#x201c;What is the adapter at the downstream signaling of Ku70?&#x201d; was the next question. In Ku70-mediated type III IFN response, an investigation was initiated from the observation of IFN-&#x3bb;1 induction in HEK and 293T (SV40-T antigen transformed HEK cell line) cells with GFP-encoding DNA plasmid transfection. With a similar green fluorescence signal observed between HEK 293 cells and 293T cells, DNA-induced IFN-&#x3bb;1 induction was detected in HEK 293 cells but not in 293T cells. By comparing the expression level among different signal mediators associated with the cytosolic sensor, we found that the stimulator of interferon genes (STING) is not endogenously expressed in 293T cells. The gain-of-function and loss-of-function study confirmed the hypothesis that STING is the downstream adaptor of Ku70 to activate the IFN-&#x3bb;1 signaling pathway. The co-immunoprecipitation assay further illustrated that Ku70 interacts with STING in the cytoplasm and forms a complex upon DNA stimulation (<xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>). At this point, the activating pathway is quite similar to the DNA-PK-mediated STING-dependent pathway. DNA-PK was reported as a DNA cytosolic sensor to induce IFN-&#x3b1; or IFN-&#x3b2; (<xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>). However, the interaction between DNA-PK and the downstream STING is in a transient pattern. After binding at three hours after DNA stimulation, STING dissociates from the complex, and this dissociation activates downstream signaling (<xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>). STING is also the downstream target of Ku70 in sensing HTLV-1 intermediate product ssDNA90 and, therefore, induces type I interferons and inflammatory cytokines through phosphorylation of IRF3 (<xref ref-type="bibr" rid="B195">Wang et&#xa0;al., 2017</xref>).</p>
<p>In addition to STING as the downstream adaptor of Ku70 or DNA-PK, other proteins, namely DNA-PKcs and PARP1, are also reported as the adaptor proteins to Ku70/80 in sensing HBV DNA (<xref ref-type="bibr" rid="B109">Li et&#xa0;al., 2016b</xref>). While sensing aging-related DNA cytoplasmic accumulation, DNA-PK interacts with ZAK, AKT, and mTOR, inducing T-cell proliferation and aging-related autoimmunity (<xref ref-type="bibr" rid="B194">Wang et&#xa0;al., 2021</xref>). Another study recently claimed that DNA-PK is a potent sensor that activates the innate immune response with STING-independent signaling pathway. However, this pathway only exists in human cells and is not present in mouse cells (<xref ref-type="bibr" rid="B29">Burleigh et&#xa0;al., 2020</xref>). In this pathway, HSPA8/HSC70 is the adaptor protein for inducible phosphorylation and then activates downstream innate immune signaling (<xref ref-type="bibr" rid="B29">Burleigh et&#xa0;al., 2020</xref>). All those different Ku70-involved mechanisms determine the diverse patterns of innate immune response in a cell-type-dependent pattern. The coexistence of various molecular mechanisms is always an interesting topic in the research field of innate immunity.</p>
<p>Compared with the induction of type I IFNs, the kinetics of Ku70-mediated IFN-&#x3bb;1 induction indicates a delayed induction profile. The IFN-&#x3bb;1 mRNA expression is initiated at about 12 hours after DNA transfection. A profound protein level of IFN-&#x3bb;1 can be detected at 48 hours after DNA transfection (<xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>). As we know, cGAS- or IFI16-mediated innate immune response is usually induced as an earlier event after stimulation: for example, at six hours after stimulation (<xref ref-type="bibr" rid="B188">Unterholzner et&#xa0;al., 2010</xref>; <xref ref-type="bibr" rid="B174">Sun et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B30">Cai et&#xa0;al., 2014</xref>). The activation of downstream of cGAS or IFI16 is the STING-TBK1-IRF3 signaling pathway. IRF3 is endogenously expressed in most cells. The activation of IRF3 is detected at three hours after stimulation, indicating that IRF3 facilitates the induction as a faster and earlier event. By contrast, Ku70-mediated IFN-&#x3bb;1 induction relies on activating the STING-TBK1-IRF3, IRF1, and IRF7 axis (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>; <xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>). IRF3 is activated first to produce a profound expression of IRF1 and IRF7, since IRF1 and IRF7 are not endogenously expressed in the cells. Once IRF1 and IRF7 are produced, IFN-&#x3bb;1 and then can be significantly induced. In summary, similar to other DNA sensor-mediated innate immune responses, the kinetics of Ku70 involved innate immune response depends on the specific signaling pathway by which interferon or inflammatory cytokines are produced.</p>
</sec>
<sec id="s5">
<title>The Cytoplasmic Translocation of Ku70 Is The Initial Step For Ku70 as a Cytosolic DNA Sensor</title>
<p>Ku70 was initially characterized as a DNA repair protein; its primary function serves in the nucleus. However, more and more studies have identified Ku70 as a cytosolic DNA sensor that mediates innate immune response. The downstream adaptor STING and another protein, HSPA8, were all found in the cells&#x2019; cytoplasm (<xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B29">Burleigh et&#xa0;al., 2020</xref>). So how can a nuclear protein sense cytosolic DNA and thereby initiate a downstream signaling pathway? This question led to identify the molecular mechanism at an earlier time point. In the case of Ku70-mediated IFN-&#x3bb;1 induction by DNA transfection, Ku70 was observed predominately located in the cytoplasm of the cells, thereby facilitating the interaction between STING and Ku70 (<xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>). So, it was speculated that upon DNA stimulation, Ku70 translocates from the nucleus to the cytoplasm of the cells. And this process is closely correlated with the induction of IFN-&#x3bb;1.</p>
<p>The subsequent study using confocal microscopy confirmed that the cytoplasmic translocation of Ku70 is observed in the cells in which IFN-&#x3bb;1 is induced by DNA transfection, such as HEK and RD cells. And consistently, such cytoplasmic translocation of Ku70 is not observed in HeLa cells, and similarly, DNA transfection does not induce IFN-&#x3bb;1 induction in HeLa cells (<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>). In addition to DNA plasmid transfection, HSV-1, a DNA virus infection, also triggered the cytoplasmic translocation in HEK cells with a virus-strain-dependent manner. Ku70 cytoplasmic translocation and IFN-&#x3bb;1 induction only in HEK cells infected with the HSV-1 McKrae strain. Those results further emphasized that the cytoplasmic translocation of Ku70 is a required step for Ku70-mediated IFN-&#x3bb;1 induction (<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>). A quantification analysis with Western blot using cytosolic fractions was adapted to characterize the accumulation kinetics of cytoplasmic Ku70. The data demonstrated that the cytoplasmic translocation of Ku70 was started right after DNA stimulation and obtained the highest level at six hours after transfection, and then the accumulation of cytoplasmic Ku70 returned to a similar level as that in unstimulated cells (<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>). These data testified two points. First, the cytoplasmic translocation of Ku70 is a kinetics process. Ku70 translocates freely from the nucleus to the cytoplasm or from the cytoplasm back to the nucleus. How DNA transfection triggers the translocation remains unclear, but we hypothesized it is due to a change in a dynamic balance between the accumulation level of Ku70 in the nuclear and the cytoplasm. When cytosolic Ku70 recognizes and associates with cytoplasmic DNA, such interaction may interrupt the equilibrium between the cytosolic and the nuclear Ku70 and then drive the translocation of Ku70 from the nucleus to the cytoplasm. Second, the kinetic study further demonstrated that the translocation of Ku70 from the nucleus to the cytoplasm is an initial and essential step in the DNA-mediated IFN-&#x3bb;1 innate immune response. Compared with the time course of IFN-&#x3bb;1 induction, the translocation of Ku70 occurred one hour right after DNA transfection and peaked at six hours. All this happened before IFN-&#x3bb;1 induction. Consequently, it is reasonable to speculate that the translocation of Ku70 happened first and that IFN-&#x3bb;1 induction occurred later since we further confirmed that recombinant IFN-&#x3bb;1 does not induce the cytoplasmic translocation of Ku70 (<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>). Like Ku70, IFI16, another DNA sensor protein, has been reported to recognize and sense DNA not only in the cytoplasm but also in the nucleus of the cells, and its sensing capabilities depend on the distribution of IFI16 (<xref ref-type="bibr" rid="B107">Li et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B47">Dell&#x2019;oste et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B10">Ansari et&#xa0;al., 2015</xref>). IFI16 detects and binds to herpes viral DNA in the nucleus of the cells. However, detection of transfected DNA or cytoplasmic viral DNA occurs in the cytoplasm. Ku70 ubiquitously expresses in the nucleus as a nuclear protein; however, there is no evidence to indicate that Ku70 can also serve as a nuclear DNA sensor protein.</p>
<p>In addition to our detailed study about the cytoplasmic translocation of Ku70, Li et&#xa0;al. also reported that the cytoplasmic-translocated Ku70/Ku80 complex senses HBV DNA and then induces hepatitis-associated chemokine secretion (<xref ref-type="bibr" rid="B109">Li et&#xa0;al., 2016b</xref>). This kind of nuclear-cytoplasmic (N-C) trafficking has become a conventional mechanism for these multifunctional DNA sensors. As we know, cGAS recognizes cytosolic DNA. This detection produces the second messenger 2&#x2019;3&#x2019;-cGAMP, and the cGAMP in turn initiates STING-dependent downstream signaling to induce type I IFNs. However, more recently, Sun et&#xa0;al. demonstrated that cGAS is located both in the cytoplasm and in the nucleus, and cGAS is required to export into the cytoplasm in response to DNA stimulation. (<xref ref-type="bibr" rid="B173">Sun et&#xa0;al., 2021</xref>). Therefore, the N-C trafficking is required for Ku70 and other multiple-functional proteins to conduct their cytosolic and nuclear activities.</p>
</sec>
<sec id="s6">
<title>The Cooperative Pattern of Ku70, Ku80, and DNA-PKcs In Mediating Innate Immune Response</title>
<p>Ku70 is a subunit of the heterotrimeric protein complex DNA-PK composing of Ku80 and the catalytic subunit DNA-PKcs. While we identified Ku70 as a novel cytosolic DNA sensor that induces IFN-&#x3bb;1 innate immune response (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>; <xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>), we hope to determine whether Ku80 or DNA-PKcs are also involved in the cytosolic-DNA-sensing activity.</p>
<p>It has been reported that DNA-PK serves as a PRR, recognizing cytoplasmic DNA and inducing the production of type I IFNs (<xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B29">Burleigh et&#xa0;al., 2020</xref>). The Ku heterodimer (<xref ref-type="bibr" rid="B192">Walker et&#xa0;al., 2001</xref>) and DNA-PKcs (<xref ref-type="bibr" rid="B77">Hammarsten and Chu, 1998</xref>) can directly bind to DNA; however, in the absence of either Ku70 or Ku80, the binding affinity of DNA-PKcs with DNA is dramatically decreased (<xref ref-type="bibr" rid="B203">Yaneva et&#xa0;al., 1997</xref>). These findings implicated that each subunit of the DNA-PK complex plays an essential role. Consistent with this study, we also observed the existence of Ku80, but not DNA-PKcs, in the complex of Ku70-STING (<xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>). Additionally, we observed the co-localization of Ku80 with Ku70 in the nucleus of unstimulated cells and the cytoplasm of DNA-transfection-stimulated cells. Those data suggest that Ku80 is translocated with Ku70 from the nucleus to the cytoplasm (<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>).</p>
<p>However, we previously reported that DNA-mediated IFN-&#x3bb;1 induction substantially decreased, when Ku70 is transiently knocked down; in contrast, knocking down of Ku80 has no impact on the induction of IFN-&#x3bb;1. To further validate the role of Ku70 and Ku80 in DNA-mediated innate immune response, the IFN&#x2010;&#x3bb;1 promoter reporter assay by overexpressing each subunit was utilized in the study. The result from the assay consistently demonstrated that overexpression of Ku70 highly activates the IFN&#x2010;&#x3bb;1 promoter. However, the overexpression of Ku80 had no impact on IFN&#x2010;&#x3bb;1 promoter activation. Moreover, the results of the co-immunoprecipitation assay directly exclude the presence of DNA-PKcs in the complex of Ku70-STING. Therefore, all those studies suggested that Ku80 and DNA-PKcs may not be directly involved in DNA-mediated IFN-&#x3bb;1 induction (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>; <xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>).</p>
<p>In studies about DNA-PK as the cytosolic DNA sensor to induce the innate immune response, it seems that DNA-PKcs is the key factor to mediate downstream signaling and that the involvement of Ku70 or Ku80 enhances the sensing capability of DNA-PKcs (<xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B29">Burleigh et&#xa0;al., 2020</xref>). In HBV infection, the Ku70/80 complex senses infected HBV DNA, and DNA-PKcs and PARP1 act as a downstream adaptor to activate hepatitis-associated chemokine secretion (<xref ref-type="bibr" rid="B109">Li et&#xa0;al., 2016b</xref>).</p>
<p>Ku70-involved innate immune response shows various patterns for the participation and function of Ku70, Ku80, and DNA-PKcs. In general, like their function in the DNA repair process, they work together as a whole complex (<xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B29">Burleigh et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B194">Wang et&#xa0;al., 2021</xref>), but in the case of type-III IFN response and Ku70 sensing HTLV-1, the functional element is Ku70 itself. However, we have become aware that when Ku70 or Ku80 is expressed individually, neither of them are stable (<xref ref-type="bibr" rid="B151">Satoh et&#xa0;al., 1995</xref>) and that the absence of one of the subunits leads to a remarkable reduction in the stable level of the other one (<xref ref-type="bibr" rid="B57">Errami et&#xa0;al., 1996</xref>; <xref ref-type="bibr" rid="B76">Gu et&#xa0;al., 1997</xref>; <xref ref-type="bibr" rid="B163">Singleton et&#xa0;al., 1997</xref>). Consequently, it is hard to precisely elucidate the function of Ku70 or Ku80 alone by completely knocking out one or the other. Further study will help to illuminate the detailed molecular mechanism of how Ku70, Ku80, or DNA-PKcs cooperate and facilitate DNA-sensing activity.</p>
</sec>
<sec id="s7">
<title>The Potential Regulation Factors Involved in Ku70-Mediated Innate Immune Response</title>
<p>Further studies have reported that Ku70, predominantly located in the nucleus of the cells, has a cytoplasmic translocation from the nucleus, then conducts its cytosolic activities, such as sensing invading cytosolic DNA to induce an innate immune response (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>; <xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>) or binding with invading viral elements/proteins to modulate virus replication (<xref ref-type="bibr" rid="B109">Li et&#xa0;al., 2016b</xref>). Therefore, abundant amounts of cytoplasmic protein accumulation seem to be essential for Ku70 to successfully recognize cytosolic DNA and activate the downstream IFN signaling pathway. Our observations, nuclear retention of Ku70, because of the treatment with leptomycin B, severely attenuates the IFN-&#x3bb;1 response to DNA stimulation (<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>), indicating that cytoplasmic translocation is a critical factor for Ku70&#x2019;s cytosolic DNA sensing.</p>
<p>Our group confirmed that acetylation at Ku70-NLS regulates the localization of Ku70 in the nucleus or in the cytoplasm, which is consistent with the finding from other groups (<xref ref-type="bibr" rid="B66">Fujimoto et&#xa0;al., 2018</xref>), and we first reported that acetylation modulates Ku70&#x2019;s DNA&#x2010;sensing activity (<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>). While importing into the nucleus, Ku70 has to interact with the Imp&#x3b1;/Imp&#x3b2; complex to facilitate nuclear translocation. With the acetylation at the region of Ku70-NLS, the interaction between acetylated Ku70 and the Imp&#x3b1;/Imp&#x3b2; complex is severely decreased. Therefore, acetylated Ku70 is predominantly located in the cytoplasm of the cells (<xref ref-type="bibr" rid="B66">Fujimoto et&#xa0;al., 2018</xref>). In line with Fujimoto&#x2019;s finding, we further demonstrated that acetylated Ku70 highly induces DNA-mediated IFN-&#x3bb;1 induction (<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>).</p>
<p>The acetylation level of a protein depends on the dynamic balance between the activity of acetylation and deacetylation enzymes (<xref ref-type="bibr" rid="B10">Ansari et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B73">Gong et&#xa0;al., 2019</xref>). Multiple lysine residues have been identified as acetylation locations on Ku70 and Ku80 (<xref ref-type="bibr" rid="B37">Cohen et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B168">Subramanian et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B5">Al-Emam et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B101">Koike et&#xa0;al., 2017</xref>). Acetylation at Ku70 lysine residues, K539, K542 (<xref ref-type="bibr" rid="B169">Subramanian et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B168">Subramanian et&#xa0;al., 2013</xref>) and K317, K331, K338 (<xref ref-type="bibr" rid="B5">Al-Emam et&#xa0;al., 2014</xref>) impaired the function of Ku70 in NHEJ, since those lysine residues of Ku70 are required for Ku70 binding with dsDNA ends during NHEJ process. Two histone acetyltransferase enzymes, CBP and PCAF, are responsible for Ku acetylation (<xref ref-type="bibr" rid="B37">Cohen et&#xa0;al., 2004</xref>). Histone deacetylases (HDACs), a family of deacetylation enzymes, regulate the deacetylation of multiple non&#x2010;histone proteins and, therefore, impact functions by changing their activity, such as cellular localization and protein-protein interactions (<xref ref-type="bibr" rid="B169">Subramanian et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B146">Roger et&#xa0;al., 2011</xref>). More than 50 non&#x2010;histone proteins, including p53 and Ku70, have been defined as the substrates of HDACs (<xref ref-type="bibr" rid="B32">Chaudhary et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B73">Gong et&#xa0;al., 2019</xref>). Trichostatin A (TSA), an inhibitor sensitive to class I/II deacetylases, was utilized in our study to evaluate the impact of this deacetylase inhibitor on the Ku70 cytoplasmic accumulation and DNA-mediated IFN-&#x3bb;1 induction. The data implicated that TSA treatment dose-dependently enhances the cytoplasmic accumulation of Ku70 and increases DNA-mediated IFN-&#x3bb;1 induction. (<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>). As we demonstrated in our study, the relationship of the acetylation levels of Ku70 and DNA-mediated innate immune response may provide a simple and elegant strategy, modulating the acetylation levels of the target protein to regulate its localization-dependent activities.</p>
<p>Ku70 and Ku80 are generally believed to always form heterodimers. And it has been consistently confirmed in our previous study that Ku80 translocates from the nucleus to the cytoplasm together with Ku70. The confocal microscopy analysis indicated that Ku70 and Ku80 colocalized together in the nucleus of unstimulated cells, and then both translocate from the nucleus to the cytoplasm upon a DNA stimulation (<xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>). However, Koik et&#xa0;al. demonstrated that the localization of Ku80 does not entirely coincide with that of Ku70, Ku80 protein was transported to the nucleus without heterodimerization with Ku70. The Ku80 NLS was demonstrated to be mediated to the nuclear rim by two components of PTAC58 and PTAC97. This findings support the idea that Ku80 can translocate to the nucleus using its own NLS independent of the translocation of Ku70 (<xref ref-type="bibr" rid="B98">Koike et&#xa0;al., 1999a</xref>). On the other hand, using the site-directed mutagenesis technique, the same group demonstrated that Ku70 can also translocate to the nucleus without heterodimerization with Ku80 or independent of DNA-PK autophosphorylation (<xref ref-type="bibr" rid="B100">Koike et&#xa0;al., 2000</xref>).</p>
<p>The N-C or C-N translocation of DNA-PKcs is rarely reported. We have confirmed DNA-PKcs is not involved in Ku70-mediated IFN-&#x3bb;1 induction. Co-immunoprecipitation assay suggested DNA-PKcs is not present in the Ku70-STING complex. Therefore, implicating that DNA-PKcs does not translocate together with Ku70 or Ku80 from the nucleus to the cytoplasm upon a DNA transfection or DNA virus infection (<xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>). Other factors may involve in facilitating the translocation of DNA-PKcs. Further study is required to help us understand the translocation of DNA-PKcs.</p>
<p>Regulation of the N-C translocation has been defined as an essential mechanism to control protein activities. Whether some other cellular factors may facilitate Ku70, Ku, or DNA-PK to respond to specific stimuli by regulating its nuclear or cytoplasmic localization remains to be identified. Better understanding the N-C translocation of Ku70, Ku80 and DNA-PKcs may provide unique insights into the multiple functions of Ku70 in the DNA repair process, Bax-mediated apoptosis, and innate immune response.</p>
<p>In addition to regulating the N-C transport, the detailed mechanisms regarding Ku70-mediated innate immunity offer multiple strategies to downregulate cytosolic DNA-induced autoimmunity or enhance innate immune response under the context of DNA vaccination. For example, Wang et&#xa0;al. found that the Ku70/Ku80 heterodimer recognizes aging-related DNA accumulation in the cytoplasm of human or mouse CD4<sup>+</sup> T cells. The sensing by the Ku complex further recruits DNA-PKs on the site and triggers the phosphorylation of ZAK. Subsequently, it activates the AKT-mTOR signaling pathway, which enhances the proliferation of CD4<sup>+</sup> T cells and accelerates the pathology progress of experimental autoimmune encephalomyelitis (EAE) in mice (<xref ref-type="bibr" rid="B194">Wang et&#xa0;al., 2021</xref>). Consequently, based on the discovered molecular mechanism, the group further developed an inhibitor specific against ZAK to dampen the pathology progress of EAE (<xref ref-type="bibr" rid="B194">Wang et&#xa0;al., 2021</xref>).</p>
<p>It is known that many viruses possess the system to escape from the innate immune response by host cells. The mechanism of the immune escape by a DNA virus, Vaccinia virus (VACV), has been investigated (<xref ref-type="bibr" rid="B25">Bowie and Unterholzner, 2008</xref>; <xref ref-type="bibr" rid="B54">Elde et&#xa0;al., 2012</xref>). The VACV C16 protein was reported as the first protein to inhibit DNA-PK-mediated signaling (<xref ref-type="bibr" rid="B137">Peters et&#xa0;al., 2013</xref>). It has been demonstrated that the C-terminal region of C16 binds directly to the Ku70/Ku80 complex, therefore blocking the sensing of Ku to DNA. The protein VACV C16 is not endogenously expressed on VACV strain Western Reserve. So the intranasal infection of this virus strain in mice leads to enhanced innate immune response and less symptoms of viral infection-related sickness (<xref ref-type="bibr" rid="B58">Fahy et&#xa0;al., 2008</xref>; <xref ref-type="bibr" rid="B137">Peters et&#xa0;al., 2013</xref>). Another protein of VACV, C4, is later identified targeting DNA-PK to inhibit DNA-PK-mediated signaling. VACV C4 possesses a similar sequence as C16, so it shares a similar mechanism to block DNA binding to DNA-PK by binding to the Ku complex. The absence of C4 promotes innate and adaptive immune responses (<xref ref-type="bibr" rid="B156">Scutts et&#xa0;al., 2018</xref>). Overall, these findings demonstrate that viral proteins help to evade the sensing of the viral genome by inhibiting the activity of PRR, therefore highlighting alternative strategies to regulate the innate immune response.</p>
<p>Similar to VACV, DNA virus HSV-1 has also shown the ability to evade innate immune responses in host cells (<xref ref-type="bibr" rid="B175">Su et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B113">Lum and Cristea, 2021</xref>). Studies from Zheng&#x2019;s lab implicated that HSV-1 VP24, a serine protease, could also inhibit dsDNA-initiated IFN production by blocking the interaction between IRF3 and TBK1 and therefore dampening the phosphorylation of IRF3 (<xref ref-type="bibr" rid="B213">Zhang et&#xa0;al., 2016a</xref>). Another study demonstrated that HSV-1 VP16 could interrupt IRF3 recruiting the CREB-binding protein coactivator, thus inhibiting IRF3-mediated downstream signaling (<xref ref-type="bibr" rid="B202">Xing et&#xa0;al., 2013</xref>). Furthermore, US3 of HSV-1, another viral protein kinase, has been reported to prevent IRF3 activation and inhibit type-I IFN production by hyper phosphorylating IRF3 at Ser175 (<xref ref-type="bibr" rid="B197">Wang et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B196">Wang et&#xa0;al., 2014</xref>). It has been reported that HSV-1 ICP27 interacts with TBK1 and STING, which impairs the activation of downstream transcription factor IRF3. (<xref ref-type="bibr" rid="B34">Christensen et&#xa0;al., 2016</xref>). Our previous study also found that the Ku70-mediated type-III IFN response was induced in an HSV-1 strain-dependent manner: Infection with the HSV-1 McKrae strain triggers the cytoplasmic translocation of Ku70 and induces IFN-&#x3bb;1 induction, while infection with the HSV-1 MacIntyre strain does not. Therefore, we speculated that the HSV-1 MacIntyre strain might encode specific viral proteins that may inhibit the signaling pathway of IFN induction. Further studies are needed to identify the specific molecular mechanism for HSV-1 immune evasion. As we listed above, all these observations implicated that HSV-1-encoded viral proteins to facilitate HSV-1 immune evasion could interrupt the downstream signaling of DNA-mediated signaling pathway, therefore providing potential strategies to regulate any signaling pathway with shared downstream signaling adaptors, such as STING, TBK1, and IRF3.</p>
<p>In summary, with an aim to highlight innate immune response mediated by DNA virus infection in a battle against viral infection, a better understanding of the interplay between host innate immune response and viral immune evasion would provide intriguing novel strategies to help develop diverse therapies to treat viral infection-related diseases.</p>
</sec>
<sec id="s8">
<title>Beyond the Role of Ku70 In Innate Immunity: A Role of Ku70 in HIV Replication Cycle and Bacterial Internalization</title>
<p>HIV needs many cellular factors to facilitate its replication (<xref ref-type="bibr" rid="B55">Emig-Agius et&#xa0;al., 2014</xref>). Ku70 and Ku80 are reported as host partners involving in HIV replication (<xref ref-type="bibr" rid="B198">Waninger et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B167">Studamire and Goff, 2008</xref>; <xref ref-type="bibr" rid="B150">Santos et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B154">Schweitzer et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B55">Emig-Agius et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B81">Hultquist et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B108">Li et&#xa0;al., 2016a</xref>). Several studies found that Ku70/Ku80 heterodimer binds with HIV genomic RNA or TAR RNA at the 5&#x2019; end of mRNA transcripts. Those data further implicated that the Ku complex may regulate the transcription process of HIV. (<xref ref-type="bibr" rid="B87">Kaczmarski and Khan, 1993</xref>; <xref ref-type="bibr" rid="B208">Yoo and Dynan, 1998</xref>); the interactions between Ku and HIV RNA may also impact the transcription level of HIV and the latency property of HIV (<xref ref-type="bibr" rid="B115">Manic et&#xa0;al., 2013</xref>). Additionally, Ku could also regulate transcriptional elongation by interacting with the RNA hairpin structure of 7SK snRNA, a scaffold protein for forming the 7SK snRNP complex (<xref ref-type="bibr" rid="B158">Shadrina et&#xa0;al., 2016</xref>; <xref ref-type="bibr" rid="B157">Shadrina et&#xa0;al., 2020</xref>). Several contradictory studies also show that Ku involves in retroviral DNA integration (<xref ref-type="bibr" rid="B45">Daniel et&#xa0;al., 1999</xref>; <xref ref-type="bibr" rid="B12">Baekelandt et&#xa0;al., 2000</xref>; <xref ref-type="bibr" rid="B44">Daniel et&#xa0;al., 2004</xref>; <xref ref-type="bibr" rid="B96">Knyazhanskaya et&#xa0;al., 2016</xref>) in the transcription of integrated provirus (<xref ref-type="bibr" rid="B86">Jeanson and Mouscadet, 2002</xref>; <xref ref-type="bibr" rid="B186">Tyagi et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B115">Manic et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B158">Shadrina et&#xa0;al., 2016</xref>), and in functions of HIV-1 matrix protein (<xref ref-type="bibr" rid="B108">Li et&#xa0;al., 2016a</xref>). Another evidence demonstrated that the DNA-PK complex involves in the induction of apoptosis in activated CD4<sup>+</sup> T cells at the early stage of HIV infection (<xref ref-type="bibr" rid="B38">Cooper et&#xa0;al., 2013</xref>).</p>
<p>HIV-1 integrase (IN) is an essential viral enzyme involving in several viral replication steps. Meanwhile, IN is also an unstable protein and degraded by the N-end rule pathway through the host ubiquitin-proteasome machinery (<xref ref-type="bibr" rid="B129">Mulder and Muesing, 2000</xref>). However, it remains unknown how HIV-1 IN is protected from degradation during HIV replication. Zheng et&#xa0;al. demonstrated that Ku70 from host cells interacts with HIV-1 IN and prevents it from the Lys48-linked polyubiquitination proteasomal pathway. Additionally, Ku70 can decrease the overall protein polyubiquitination level and specifically deubiquitinate IN by binding with HIV-1 IN (<xref ref-type="bibr" rid="B216">Zheng et&#xa0;al., 2011</xref>). Mutagenic studies by Anisenko et&#xa0;al. showed that the amino acid residues 51-160 of HIV-1 IN interacts with 251-438 aa of Ku70. It is further reported that the N-terminal region (1-250 aa) of Ku70 interacts with the &#x3b1;6-helix region located at the 200-220 residues of IN, and the single mutations at E212A or L213A abrogate the interaction. Those findings highlighted the essential role of the 200-220 aa residues of IN in forming a complex with Ku70 (<xref ref-type="bibr" rid="B6">Anisenko et&#xa0;al., 2017a</xref>).</p>
<p>Additionally, knockdown of Ku70 significantly inhibits the HIV-1 virus replication in virus-producing cell lines or HIV-infected CD4+ T cells, and the copy number of two-long terminal repeat (LTR) circles and integrated proviral DNA cannot be detected. Those data implicated that Ku70 is an indispensable factor at the early and the late stages of HIV-1 replication (<xref ref-type="bibr" rid="B216">Zheng et&#xa0;al., 2011</xref>) (as illustrated in <xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>). HIV-1 IN is an essential enzyme in HIV virions and integrates the proviral DNA into the host genomic DNA. Integration is a critical step during HIV-1 replication. (<xref ref-type="bibr" rid="B33">Cherepanov et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B59">Faure et&#xa0;al., 2005</xref>; <xref ref-type="bibr" rid="B136">Passos et&#xa0;al., 2017</xref>). In detail, IN binds viral DNA and then catalyzes the cleavage of dinucleotides from both 3&#x2019;-ends of viral DNA. The complex of 3&#x2019;-processed viral DNA and IN helps recruit some other viral and cellular proteins as cofactors. Subsequently, the whole complex imports into the nucleus. The second step of integration happens in the nucleus of the host cells. IN inserts the processed viral DNA into one strand of the genomic DNA of host cells (<xref ref-type="bibr" rid="B106">Lesbats et&#xa0;al., 2016</xref>). This insertion leads to 5-nucleotide gaps (<xref ref-type="bibr" rid="B190">Vincent et&#xa0;al., 1990</xref>; <xref ref-type="bibr" rid="B191">Vink et&#xa0;al., 1990</xref>; <xref ref-type="bibr" rid="B106">Lesbats et&#xa0;al., 2016</xref>). As a result, 3&#x2019;-ends of viral DNA are then covalently associated with the cellular DNA. However, an overhang is formed at the 5&#x2032;-ends because of an unpaired dinucleotide (<xref ref-type="bibr" rid="B95">Knyazhanskaya et&#xa0;al., 2019</xref>). In order to complete the integration process, the intermediate product has to be repaired (<xref ref-type="bibr" rid="B96">Knyazhanskaya et&#xa0;al., 2016</xref>). Knyazhanskaya et&#xa0;al. proposed that the direct binding between Ku70 and HIV-1 IN greatly facilitates the recruitment of Ku80 and DNA-PKcs to the integration site. And then, the whole DNA-PK complex sufficiently functions in initiating the DNA repair process by the NHEJ pathway and resumes efficient HIV-1 replication (<xref ref-type="bibr" rid="B95">Knyazhanskaya et&#xa0;al., 2019</xref>).</p>
<p>Interestingly, Zheng et&#xa0;al. found that Ku70 is incorporated into HIV viral particles (<xref ref-type="bibr" rid="B216">Zheng et&#xa0;al., 2011</xref>). Nascent HIV viruses contain Gag and GagPol polyproteins, and viral genomic RNAs (as illustrated in <xref ref-type="fig" rid="f4">
<bold>Figure&#xa0;4</bold>
</xref>). The polyproteins are composed of several HIV proteins and immature forms of IN, located at the C&#x2019;- terminus end (<xref ref-type="bibr" rid="B82">Imamichi et&#xa0;al., 2021</xref>). Thus, Ku70 maybe incorporated in the virion during assembly <italic>via</italic> the immature IN. As IN regulates viral maturation (<xref ref-type="bibr" rid="B56">Engelman et&#xa0;al., 1995</xref>; <xref ref-type="bibr" rid="B26">Bukovsky and G&#xf6;ttlinger, 1996</xref>; <xref ref-type="bibr" rid="B13">Balakrishnan et&#xa0;al., 2013</xref>; <xref ref-type="bibr" rid="B80">Hoyte et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B82">Imamichi et&#xa0;al., 2021</xref>). Further study may reveal more roles of Ku70 during retrovirus infection and replication.</p>
<p>Overall, many studies have provided examples of how HIV-1 viruses commandeer host cellular machinery to protect themselves and facilitate viral replication (<xref ref-type="bibr" rid="B216">Zheng et&#xa0;al., 2011</xref>). Consequently, identifying the host cell factors that participate in these processes and determining their functions in HIV viral replication may lead to discovering novel therapeutic targets to fight HIV (<xref ref-type="bibr" rid="B3">Adamson and Freed, 2010</xref>; <xref ref-type="bibr" rid="B185">Tintori et&#xa0;al., 2014</xref>). Ku70 may become an ideal therapeutic target to treat patients infected with multi-drug-resistant HIV variants.</p>
<p>As we discussed in the current review, cytosolic Ku70, which is translocated from the nucleus to the cytoplasm, can sense cytosolic DNA to induce innate immune response (<xref ref-type="bibr" rid="B210">Zhang et&#xa0;al., 2011a</xref>; <xref ref-type="bibr" rid="B62">Ferguson et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B109">Li et&#xa0;al., 2016b</xref>; <xref ref-type="bibr" rid="B172">Sui et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B195">Wang et&#xa0;al., 2017</xref>; <xref ref-type="bibr" rid="B29">Burleigh et&#xa0;al., 2020</xref>; <xref ref-type="bibr" rid="B170">Sui et&#xa0;al., 2021</xref>; <xref ref-type="bibr" rid="B194">Wang et&#xa0;al., 2021</xref>), and can inhibit Bax-mediated apoptosis (<xref ref-type="bibr" rid="B152">Sawada et&#xa0;al., 2003</xref>; <xref ref-type="bibr" rid="B118">Mazumder et&#xa0;al., 2007</xref>). Additionally, Ku70 has also been found localized in the plasma membrane, where it can interact with metalloprotease 9 (MMP-9) (<xref ref-type="bibr" rid="B127">Monferran et&#xa0;al., 2004b</xref>), fibronectin (<xref ref-type="bibr" rid="B126">Monferran et&#xa0;al., 2004a</xref>) and participate in heterologous and homologous cell adhesion (<xref ref-type="bibr" rid="B97">Koike, 2002</xref>). It was also reported that the cell-surfaced Ku70 acts as a receptor for the infection of <italic>Rickettsia conorii</italic> (<italic>R. conorii</italic>), a negative gamma bacterium; the rickettsial protein, rOmpB, binds to Ku70 as a ligand. The interaction plays an important role in initiating infection signals, ultimately leading to bacterial entry (<xref ref-type="bibr" rid="B116">Martinez et&#xa0;al., 2005</xref>). The plasma membrane-associated Ku70 has also been identified in lipid rafts, and so it has been speculated that the existence of Ku70 within these domains may play an essential role in pathogen entry and signal transduction (<xref ref-type="bibr" rid="B111">Lucero et&#xa0;al., 2003</xref>).</p>
<p>Beyond the role of Ku70 in innate immunity, those studies about the involvement of Ku70 in pathogen invasion and HIV replication highlighted a further understanding of the interplay between the host protein Ku70 and pathogen. Further investigation could lead to the development of novel, efficacious therapies in the treatment and prevention of infectious diseases.</p>
</sec>
<sec id="s9" sec-type="conclusions">
<title>Conclusions and Perspectives</title>
<p>The study of Ku70/80 is expanding to encompass numerous research fields, including regulatory processes. More and more promising research emphasizes the role of Ku in innate immunity, the development of a small-molecule Ku inhibitor (<xref ref-type="bibr" rid="B199">Weterings et&#xa0;al., 2016</xref>), and the essential clinical relevance of Ku. Exploring the molecular mechanism by which the Ku- or DNA-PK-involved innate immune response confers various strategies to regulate innate immune cascade and could shed light on the role of Ku70 in autoimmune diseases, vaccine development, or aging-related abnormalities. Further investigation could lead to more discoveries at both the basic and translational research levels.</p>
<p>Delineation of the molecular mechanisms of Ku70-mediated innate immune response, especially the cytoplasmic translocation of Ku70, provides novel strategies to regulate innate immune cascades in response to the invasion of foreign microbe DNA or the accumulation of abnormal cellular DNA. Some autoimmune diseases are caused by the persistent induction of proinflammatory cytokines and IFNs. The emergence of mutations in some genes, including <italic>Trex1</italic>, <italic>RNase H</italic>, <italic>SAMHD1</italic>, and others (<xref ref-type="bibr" rid="B42">Crow et&#xa0;al., 2006a</xref>; <xref ref-type="bibr" rid="B43">Crow et&#xa0;al., 2006b</xref>; <xref ref-type="bibr" rid="B144">Rice et&#xa0;al., 2009</xref>; <xref ref-type="bibr" rid="B41">Crow et&#xa0;al., 2015</xref>) leads to the abnormal accumulation of cellular DNA. Those abnormal cytoplasmic DNAs serve as dangerous PAMPs and are recognized by potential PRRs in host cells, and then initiate continuous production of innate immune cytokines. Hypothetically, inhibition of the cytoplasmic translocation of DNA sensors, such as Ku70 and IFI16, with some small compounds is expected to abrogate the sensing of cytosolic DNA, therefore downregulating IFN response and providing effective interventions for these autoimmune diseases. Similar strategies may also be used to decrease the over-response of host cells to some viral infections (<xref ref-type="bibr" rid="B173">Sun et&#xa0;al., 2021</xref>).</p>
<p>Future research may reveal a more comprehensive understanding of the multiple roles of Ku70, especially in the field of Ku70-involved innate immune networks. These findings would help us solve some remaining questions: how Ku70 regulates its activities in the nucleus and the cytoplasm, and whether it is possible that Ku70 also serves as a nucleus DNA sensor like IFI16 (<xref ref-type="bibr" rid="B92">Kerur et&#xa0;al., 2011</xref>; <xref ref-type="bibr" rid="B187">Unterholzner and Bowie, 2011</xref>; <xref ref-type="bibr" rid="B107">Li et&#xa0;al., 2012</xref>; <xref ref-type="bibr" rid="B47">Dell&#x2019;oste et&#xa0;al., 2014</xref>; <xref ref-type="bibr" rid="B10">Ansari et&#xa0;al., 2015</xref>; <xref ref-type="bibr" rid="B148">Roy et&#xa0;al., 2019</xref>). Overall, a better understanding of the multiple functions of Ku70 at both the cellular and organismal level would provide new insights into treatments of infectious diseases and autoimmune abnormalities.</p>
</sec>
<sec id="s10" sec-type="author-contributions">
<title>Author Contributions</title>
<p>HS and TI conceptualized the work and contributed to writing the manuscript. MH and WC contributed to homology modeling for human Ku70 and Ku80. All authors contributed to editing the manuscript and approved the submitted version.</p>
</sec>
<sec id="s11" sec-type="funding-information">
<title>Funding</title>
<p>This research was supported (in part) by the National Institute of Allergy and Infectious Diseases. This project has been funded in whole or in part with federal funds from the National Cancer Institute, National Institutes of Health, under Contract No. HHSN261200800001E.</p>
</sec>
<sec id="s12">
<title>Author Disclaimer</title>
<p>The content of this publication does not necessarily reflect the views or policies of the Department of Health and Human Services, nor does mention of trade names, commercial products, or organizations imply endorsement by the U.S. Government.</p>
</sec>
<sec id="s13" sec-type="COI-statement">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s14" sec-type="disclaimer">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
</body>
<back>
<ack>
<title>Acknowledgments </title>
<p>The authors thank Y. Sei for creating the illustration of the HIV life cycle.</p>
</ack>
<sec id="s15">
<title>Abbreviations</title>
<p>DNA-PK, DNA-dependent protein kinase; NHEJ, non-homologous end-joining; PRRs, pattern recognition receptors; PAMPs, pathogen-associated molecular patterns; TLRs, Toll-like receptors; RIG-I, retinoic acid-inducible gene I; NF-&#x3ba;B, nuclear factor &#x3ba;B; IFN, interferon; IRF3, Interferon regulatory factor 3; IL-1&#x3b2;, interleukin-1&#x3b2;b; DDX41, DEAD-box helicase 41; IFI16, gamma-interferon-inducible protein; DAI, DNA-dependent activator of IFN-regulatory factors; dsDNAs, double-stranded DNAs; LRRFIP1, Leucine-rich repeat flightless-interacting protein 1; DHX, DEAH box protein; AIM2, absent in melanoma 2; PYHIN, pyrin- and HIN200-domain-containing protein; MyD88, myeloid differentiation primary response 88; cGAS, cyclic GMP-AMP synthase; ASC, apoptosis-associated speck-like protein; XRCC, X-ray repair cross-complementing protein; NLS, nuclear localization signal; RD, rhabdomyosarcoma; VACV, vaccinia virus; HBV, hepatitis B virus; HSV, herpes simplex virus; HDACs, histone deacetylases; TSA, trichostatin A; N&#x2013;C, nuclear-cytoplasmic; EAE, experimental autoimmune encephalomyelitis; IN, integrase; Ub, ubiquitination; CT DNA, calf thymus sonicated DNA; HTLV-1, human T-lymphotropic virus type 1; NTD, N-terminal domain; CTD, C-terminal domain; ISD, interferon stimulatory DNA.</p>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Abbasi</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Parmar</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Kelly</surname> <given-names>R. D.</given-names>
</name>
<name>
<surname>Balasuriya</surname> <given-names>N.</given-names>
</name>
<name>
<surname>Schild-Poulter</surname> <given-names>C.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>The Ku Complex: Recent Advances and Emerging Roles Outside of Non-Homologous End-Joining</article-title>. <source>Cell Mol. Life Sci.</source> <volume>78</volume> (<issue>10</issue>), <fpage>4589</fpage>&#x2013;<lpage>4613</lpage>. doi: <pub-id pub-id-type="doi">10.1007/s00018-021-03801-1</pub-id>
</citation>
</ref>
<ref id="B2">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Abdelbaqi</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Di Paola</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Rampakakis</surname> <given-names>E.</given-names>
</name>
<name>
<surname>Zannis-Hadjopoulos</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Ku Protein Levels, Localization and Association to Replication Origins in Different Stages of Breast Tumor Progression</article-title>. <source>J. Cancer</source> <volume>4</volume>, <fpage>358</fpage>&#x2013;<lpage>370</lpage>. doi: <pub-id pub-id-type="doi">10.7150/jca.6289</pub-id>
</citation>
</ref>
<ref id="B3">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Adamson</surname> <given-names>C. S.</given-names>
</name>
<name>
<surname>Freed</surname> <given-names>E. O.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>Novel Approaches to Inhibiting HIV-1 Replication</article-title>. <source>Antiviral Res.</source> <volume>85</volume>, <fpage>119</fpage>&#x2013;<lpage>141</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.antiviral.2009.09.009</pub-id>
</citation>
</ref>
<ref id="B4">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Akira</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Uematsu</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Takeuchi</surname> <given-names>O.</given-names>
</name>
</person-group> (<year>2006</year>). <article-title>Pathogen Recognition and Innate Immunity</article-title>. <source>Cell</source> <volume>124</volume>, <fpage>783</fpage>&#x2013;<lpage>801</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.cell.2006.02.015</pub-id>
</citation>
</ref>
<ref id="B5">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Al-Emam</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Arbon</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Kysela</surname> <given-names>B.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Deacetylation of Ku70 Regulates Ionizing-Radiation Induced DNA Damage Responses in Human Cells</article-title>. <source>BMC Genomics</source> <volume>15</volume>, <fpage>P24</fpage>. doi: <pub-id pub-id-type="doi">10.1186/1471-2164-15-S2-P24</pub-id>
</citation>
</ref>
<ref id="B6">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Anisenko</surname> <given-names>A. N.</given-names>
</name>
<name>
<surname>Knyazhanskaya</surname> <given-names>E. S.</given-names>
</name>
<name>
<surname>Zalevsky</surname> <given-names>A. O.</given-names>
</name>
<name>
<surname>Agapkina</surname> <given-names>J. Y.</given-names>
</name>
<name>
<surname>Sizov</surname> <given-names>A. I.</given-names>
</name>
<name>
<surname>Zatsepin</surname> <given-names>T. S.</given-names>
</name>
<etal/>
</person-group>. (<year>2017</year>a). <article-title>Characterization of HIV-1 Integrase Interaction With Human Ku70 Protein and Initial Implications for Drug Targeting</article-title>. <source>Sci. Rep.</source> <volume>7</volume>, <fpage>5649</fpage>. doi: <pub-id pub-id-type="doi">10.1038/s41598-017-05659-5</pub-id>
</citation>
</ref>
<ref id="B7">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Anisenko</surname> <given-names>A. N.</given-names>
</name>
<name>
<surname>Knyazhanskaya</surname> <given-names>E. S.</given-names>
</name>
<name>
<surname>Zatsepin</surname> <given-names>T. S.</given-names>
</name>
<name>
<surname>Gottikh</surname> <given-names>M. B.</given-names>
</name>
</person-group> (<year>2017</year>b). <article-title>Human Ku70 Protein Binds Hairpin RNA and Double Stranded DNA Through Two Different Sites</article-title>. <source>Biochimie</source> <volume>132</volume>, <fpage>85</fpage>&#x2013;<lpage>93</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.biochi.2016.11.001</pub-id>
</citation>
</ref>
<ref id="B8">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ank</surname> <given-names>N.</given-names>
</name>
<name>
<surname>Paludan</surname> <given-names>S. R.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>Type III IFNs: New Layers of Complexity in Innate Antiviral Immunity</article-title>. <source>Biofactors</source> <volume>35</volume>, <fpage>82</fpage>&#x2013;<lpage>87</lpage>. doi: <pub-id pub-id-type="doi">10.1002/biof.19</pub-id>
</citation>
</ref>
<ref id="B9">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ank</surname> <given-names>N.</given-names>
</name>
<name>
<surname>West</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Bartholdy</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Eriksson</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Thomsen</surname> <given-names>A. R.</given-names>
</name>
<name>
<surname>Paludan</surname> <given-names>S. R.</given-names>
</name>
</person-group> (<year>2006</year>). <article-title>Lambda Interferon (IFN-&#x3bb;), a Type III IFN, Is Induced by Viruses and IFNs and Displays Potent Antiviral Activity Against Select Virus Infections <italic>In Vivo</italic>
</article-title>. <source>J. Virol.</source> <volume>80</volume>, <fpage>4501</fpage>&#x2013;<lpage>4509</lpage>. doi: <pub-id pub-id-type="doi">10.1128/JVI.80.9.4501-4509.2006</pub-id>
</citation>
</ref>
<ref id="B10">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ansari</surname> <given-names>M. A.</given-names>
</name>
<name>
<surname>Dutta</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Veettil</surname> <given-names>M. V.</given-names>
</name>
<name>
<surname>Dutta</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Iqbal</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Kumar</surname> <given-names>B.</given-names>
</name>
<etal/>
</person-group>. (<year>2015</year>). <article-title>Herpesvirus Genome Recognition Induced Acetylation of Nuclear IFI16 Is Essential for Its Cytoplasmic Translocation, Inflammasome and IFN-? Responses</article-title>. <source>PLoS Pathog.</source> <volume>11</volume>, <fpage>e1005019</fpage>. doi: <pub-id pub-id-type="doi">10.1371/journal.ppat.1005019</pub-id>
</citation>
</ref>
<ref id="B11">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Aravind</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Koonin</surname> <given-names>E. V.</given-names>
</name>
</person-group> (<year>2001</year>). <article-title>Prokaryotic Homologs of the Eukaryotic DNA-End-Binding Protein Ku, Novel Domains in the Ku Protein and Prediction of a Prokaryotic Double-Strand Break Repair System</article-title>. <source>Genome Res.</source> <volume>11</volume> (<issue>8</issue>), <fpage>1365</fpage>&#x2013;<lpage>1374</lpage>. doi: <pub-id pub-id-type="doi">10.1101/gr.181001</pub-id>
</citation>
</ref>
<ref id="B12">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Baekelandt</surname> <given-names>V.</given-names>
</name>
<name>
<surname>Claeys</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Cherepanov</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Clercq</surname> <given-names>E. D.</given-names>
</name>
<name>
<surname>Strooper</surname> <given-names>B. D.</given-names>
</name>
<name>
<surname>Nuttin</surname> <given-names>B.</given-names>
</name>
<etal/>
</person-group>. (<year>2000</year>). <article-title>DNA-Dependent Protein Kinase Is Not Required for Efficient Lentivirus Integration</article-title>. <source>J. Virol.</source> <volume>74</volume> (<issue>23</issue>), <fpage>11278</fpage>&#x2013;<lpage>11285</lpage>. doi: <pub-id pub-id-type="doi">10.1128/JVI.74.23.11278-11285.2000</pub-id>
</citation>
</ref>
<ref id="B13">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Balakrishnan</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Yant</surname> <given-names>S. R.</given-names>
</name>
<name>
<surname>Tsai</surname> <given-names>L.</given-names>
</name>
<name>
<surname>O&#x2019;sullivan</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Bam</surname> <given-names>R. A.</given-names>
</name>
<name>
<surname>Tsai</surname> <given-names>A.</given-names>
</name>
<etal/>
</person-group>. (<year>2013</year>). <article-title>Non-Catalytic Site HIV-1 Integrase Inhibitors Disrupt Core Maturation and Induce a Reverse Transcription Block in Target Cells</article-title>. <source>PLoS One</source> <volume>8</volume>, <fpage>e74163</fpage>. doi: <pub-id pub-id-type="doi">10.1371/journal.pone.0074163</pub-id>
</citation>
</ref>
<ref id="B14">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Barber</surname> <given-names>G. N.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Cytoplasmic DNA Innate Immune Pathways</article-title>. <source>Immunol. Rev.</source> <volume>243</volume>, <fpage>99</fpage>&#x2013;<lpage>108</lpage>. doi: <pub-id pub-id-type="doi">10.1111/j.1600-065X.2011.01051.x</pub-id>
</citation>
</ref>
<ref id="B15">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Barnes</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Rio</surname> <given-names>D.</given-names>
</name>
</person-group> (<year>1997</year>). <article-title>DNA Double-Strand-Break Sensitivity, DNA Replication, and Cell Cycle Arrest Phenotypes of Ku-Deficient Saccharomyces&#x2009;Cerevisiae</article-title>. <source>Proc. Nat. Acad. Sci.</source> <volume>94</volume> (<issue>3</issue>), <fpage>867</fpage>&#x2013;<lpage>872</lpage>. doi: <pub-id pub-id-type="doi">10.1073/pnas.94.3.867</pub-id>
</citation>
</ref>
<ref id="B16">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bassing</surname> <given-names>C. H.</given-names>
</name>
<name>
<surname>Swat</surname> <given-names>W.</given-names>
</name>
<name>
<surname>Alt</surname> <given-names>F. W.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>The Mechanism and Regulation of Chromosomal V(D)J Recombination</article-title>. <source>Cell</source> <volume>109</volume>, <fpage>S45</fpage>&#x2013;<lpage>S55</lpage>. doi: <pub-id pub-id-type="doi">10.1016/S0092-8674(02)00675-X</pub-id>
</citation>
</ref>
<ref id="B17">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bertuch</surname> <given-names>A. A.</given-names>
</name>
<name>
<surname>Lundblad</surname> <given-names>V.</given-names>
</name>
</person-group> (<year>2003</year>). <article-title>The Ku Heterodimer Performs Separable Activities at Double-Strand Breaks and Chromosome Termini</article-title>. <source>Mol. Cell. Biol.</source> <volume>23</volume> (<issue>22</issue>), <fpage>8202</fpage>&#x2013;<lpage>8215</lpage>. doi: <pub-id pub-id-type="doi">10.1128/MCB.23.22.8202-8215.2003</pub-id>
</citation>
</ref>
<ref id="B18">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Beutler</surname> <given-names>B. A.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>TLRs and Innate Immunity</article-title>. <source>Blood</source> <volume>113</volume>, <fpage>1399</fpage>&#x2013;<lpage>1407</lpage>. doi: <pub-id pub-id-type="doi">10.1182/blood-2008-07-019307</pub-id>
</citation>
</ref>
<ref id="B19">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Biasini</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Bienert</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Waterhouse</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Arnold</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Studer</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Schmidt</surname> <given-names>T.</given-names>
</name>
<etal/>
</person-group>. (<year>2014</year>). <article-title>SWISS-MODEL: Modelling Protein Tertiary and Quaternary Structure Using Evolutionary Information</article-title>. <source>Nucleic Acids Res.</source> <volume>42</volume>, <fpage>W252</fpage>&#x2013;<lpage>W258</lpage>. doi: <pub-id pub-id-type="doi">10.1093/nar/gku340</pub-id>
</citation>
</ref>
<ref id="B20">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Blackford</surname> <given-names>A. N.</given-names>
</name>
<name>
<surname>Jackson</surname> <given-names>S. P.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>ATM, ATR, and DNA-PK: The Trinity at the Heart of the DNA Damage Response</article-title>. <source>Mol. Cell</source> <volume>66</volume>, <fpage>801</fpage>&#x2013;<lpage>817</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.molcel.2017.05.015</pub-id>
</citation>
</ref>
<ref id="B21">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Blier</surname> <given-names>P. R.</given-names>
</name>
<name>
<surname>Griffith</surname> <given-names>A. J.</given-names>
</name>
<name>
<surname>Craft</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Hardin</surname> <given-names>J. A.</given-names>
</name>
</person-group> (<year>1993</year>). <article-title>Binding of Ku Protein to DNA. Measurement of Affinity for Ends and Demonstration of Binding to Nicks</article-title>. <source>J. Biol. Chem.</source> <volume>268</volume>, <fpage>7594</fpage>&#x2013;<lpage>7601</lpage>. doi: <pub-id pub-id-type="doi">10.1016/S0021-9258(18)53216-6</pub-id>
</citation>
</ref>
<ref id="B22">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Booth</surname> <given-names>D.</given-names>
</name>
<name>
<surname>George</surname> <given-names>J.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Loss of Function of the New Interferon IFN-&#x3bb;4 May Confer Protection From Hepatitis C</article-title>. <source>Nat. Genet.</source> <volume>45</volume>, <fpage>119</fpage>&#x2013;<lpage>120</lpage>. doi: <pub-id pub-id-type="doi">10.1038/ng.2537</pub-id>
</citation>
</ref>
<ref id="B23">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bowater</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Doherty</surname> <given-names>A. J.</given-names>
</name>
</person-group> (<year>2006</year>). <article-title>Making Ends Meet: Repairing Breaks in Bacterial DNA by Non-Homologous End-Joining</article-title>. <source>PLoS Genet.</source> <volume>2</volume>, <fpage>e8</fpage>. doi: <pub-id pub-id-type="doi">10.1371/journal.pgen.0020008</pub-id>
</citation>
</ref>
<ref id="B24">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bowie</surname> <given-names>A. G.</given-names>
</name>
<name>
<surname>Haga</surname> <given-names>I. R.</given-names>
</name>
</person-group> (<year>2005</year>). <article-title>The Role of Toll-Like Receptors in the Host Response to Viruses</article-title>. <source>Mol. Immunol.</source> <volume>42</volume>, <fpage>859</fpage>&#x2013;<lpage>867</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.molimm.2004.11.007</pub-id>
</citation>
</ref>
<ref id="B25">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bowie</surname> <given-names>A. G.</given-names>
</name>
<name>
<surname>Unterholzner</surname> <given-names>L.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Viral Evasion and Subversion of Pattern-Recognition Receptor Signalling</article-title>. <source>Nat. Rev. Immunol.</source> <volume>8</volume>, <fpage>911</fpage>&#x2013;<lpage>922</lpage>. doi: <pub-id pub-id-type="doi">10.1038/nri2436</pub-id>
</citation>
</ref>
<ref id="B26">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bukovsky</surname> <given-names>A.</given-names>
</name>
<name>
<surname>G&#xf6;ttlinger</surname> <given-names>H.</given-names>
</name>
</person-group> (<year>1996</year>). <article-title>Lack of Integrase can Markedly Affect Human Immunodeficiency Virus Type 1 Particle Production in the Presence of an Active Viral Protease</article-title>. <source>J. Virol.</source> <volume>70</volume>, <fpage>6820</fpage>&#x2013;<lpage>6825</lpage>. doi: <pub-id pub-id-type="doi">10.1128/jvi.70.10.6820-6825.1996</pub-id>
</citation>
</ref>
<ref id="B27">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bunch</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Lawney</surname> <given-names>B. P.</given-names>
</name>
<name>
<surname>Lin</surname> <given-names>Y.-F.</given-names>
</name>
<name>
<surname>Asaithamby</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Murshid</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>Y. E.</given-names>
</name>
<etal/>
</person-group>. (<year>2015</year>). <article-title>Transcriptional Elongation Requires DNA Break-Induced Signalling</article-title>. <source>Nat. Commun.</source> <volume>6</volume>, <fpage>10191</fpage>. doi: <pub-id pub-id-type="doi">10.1038/ncomms10191</pub-id>
</citation>
</ref>
<ref id="B28">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Burckstuummer</surname> <given-names>T.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>An Orthogonal Proteomic-Genomic Screen Identifies AIM2 as a Cytoplasmic DNA Sensor for the Inflammasome</article-title>. <source>Nat. Immunol.</source> <volume>10</volume>, <fpage>266</fpage>&#x2013;<lpage>272</lpage>. doi: <pub-id pub-id-type="doi">10.1038/ni.1702</pub-id>
</citation>
</ref>
<ref id="B29">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Burleigh</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Maltbaek</surname> <given-names>J. H.</given-names>
</name>
<name>
<surname>Cambier</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Green</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Gale</surname> <given-names>M.</given-names>
</name>
<name>
<surname>James</surname> <given-names>R. C.</given-names>
</name>
<etal/>
</person-group>. (<year>2020</year>). <article-title>Human DNA-PK Activates a STING-Independent DNA Sensing Pathway</article-title>. <source>Sci. Immunol.</source> <volume>5</volume>, <fpage>eaba4219</fpage>. doi: <pub-id pub-id-type="doi">10.1126/sciimmunol.aba4219</pub-id>
</citation>
</ref>
<ref id="B30">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cai</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Chiu</surname> <given-names>Y.-H.</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>,. Z. J.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>The cGAS-cGAMP-STING Pathway of Cytosolic DNA Sensing and Signaling</article-title>. <source>Mol. Cell</source> <volume>54</volume>, <fpage>289</fpage>&#x2013;<lpage>296</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.molcel.2014.03.040</pub-id>
</citation>
</ref>
<ref id="B31">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chaplin</surname> <given-names>A. K.</given-names>
</name>
<name>
<surname>Hardwick</surname> <given-names>S. W.</given-names>
</name>
<name>
<surname>Liang</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Kefala Stavridi</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Hnizda</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Cooper</surname> <given-names>L. R.</given-names>
</name>
<etal/>
</person-group>. (<year>2021</year>). <article-title>Dimers of DNA-PK Create a Stage for DNA Double-Strand Break Repair</article-title>. <source>Nat. Struct. Mol. Biol.</source> <volume>28</volume>, <fpage>13</fpage>&#x2013;<lpage>19</lpage>. doi: <pub-id pub-id-type="doi">10.1038/s41594-020-00517-x</pub-id>
</citation>
</ref>
<ref id="B32">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chaudhary</surname> <given-names>N.</given-names>
</name>
<name>
<surname>Nakka</surname> <given-names>K. K.</given-names>
</name>
<name>
<surname>Chavali</surname> <given-names>P. L.</given-names>
</name>
<name>
<surname>Bhat</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Chatterjee</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Chattopadhyay</surname> <given-names>S.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>SMAR1 Coordinates HDAC6-Induced Deacetylation of Ku70 and Dictates Cell Fate Upon Irradiation</article-title>. <source>Cell Death Dis.</source> <volume>5</volume>, <fpage>e1447</fpage>&#x2013;<lpage>e1447</lpage>. doi: <pub-id pub-id-type="doi">10.1038/cddis.2014.397</pub-id>
</citation>
</ref>
<ref id="B33">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cherepanov</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Maertens</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Proost</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Devreese</surname> <given-names>B.</given-names>
</name>
<name>
<surname>Van Beeumen</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Engelborghs</surname> <given-names>Y.</given-names>
</name>
<etal/>
</person-group>. (<year>2003</year>). <article-title>HIV-1 Integrase Forms Stable Tetramers and Associates With LEDGF/p75 Protein in Human Cells</article-title>. <source>J. Biol. Chem.</source> <volume>278</volume>, <fpage>372</fpage>&#x2013;<lpage>381</lpage>. doi: <pub-id pub-id-type="doi">10.1074/jbc.M209278200</pub-id>
</citation>
</ref>
<ref id="B34">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Christensen</surname> <given-names>M. H.</given-names>
</name>
<name>
<surname>Jensen</surname> <given-names>S. B.</given-names>
</name>
<name>
<surname>Miettinen</surname> <given-names>J. J.</given-names>
</name>
<name>
<surname>Luecke</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Prabakaran</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Reinert</surname> <given-names>L. S.</given-names>
</name>
<etal/>
</person-group>. (<year>2016</year>). <article-title>HSV-1 ICP27 Targets the TBK1-Activated STING Signalsome to Inhibit Virus-Induced Type I IFN Expression</article-title>. <source>EMBO J.</source> <volume>35</volume> (<issue>13</issue>), <fpage>1385</fpage>&#x2013;<lpage>1399</lpage>. doi: <pub-id pub-id-type="doi">10.15252/embj.201593458</pub-id>
</citation>
</ref>
<ref id="B35">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Christensen</surname> <given-names>M. H.</given-names>
</name>
<name>
<surname>Paludan</surname> <given-names>S. R.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Viral Evasion of DNA-Stimulated Innate Immune Responses</article-title>. <source>Cell. Mol. Immunol.</source> <volume>14</volume>, <fpage>4</fpage>. doi: <pub-id pub-id-type="doi">10.1038/cmi.2016.06</pub-id>
</citation>
</ref>
<ref id="B36">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Coccia</surname> <given-names>E. M.</given-names>
</name>
<name>
<surname>Severa</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Giacomini</surname> <given-names>E.</given-names>
</name>
<name>
<surname>Monneron</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Remoli</surname> <given-names>M. E.</given-names>
</name>
<name>
<surname>Julkunen</surname> <given-names>I.</given-names>
</name>
<etal/>
</person-group>. (<year>2004</year>). <article-title>Viral Infection and Toll-Like Receptor Agonists Induce a Differential Expression of Type&#x2004;I and &#x3bb; Interferons in Human Plasmacytoid and Monocyte-Derived Dendritic Cells</article-title>. <source>Eur. J. Immunol.</source> <volume>34</volume>, <fpage>796</fpage>&#x2013;<lpage>805</lpage>. doi: <pub-id pub-id-type="doi">10.1002/eji.200324610</pub-id>
</citation>
</ref>
<ref id="B37">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cohen</surname> <given-names>H. Y.</given-names>
</name>
<name>
<surname>Lavu</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Bitterman</surname> <given-names>K. J.</given-names>
</name>
<name>
<surname>Hekking</surname> <given-names>B.</given-names>
</name>
<name>
<surname>Imahiyerobo</surname> <given-names>T. A.</given-names>
</name>
<name>
<surname>Miller</surname> <given-names>C.</given-names>
</name>
<etal/>
</person-group>. (<year>2004</year>). <article-title>Acetylation of the C Terminus of Ku70 by CBP and PCAF Controls Bax-Mediated Apoptosis</article-title>. <source>Mol. Cell</source> <volume>13</volume>, <fpage>627</fpage>&#x2013;<lpage>638</lpage>. doi: <pub-id pub-id-type="doi">10.1016/S1097-2765(04)00094-2</pub-id>
</citation>
</ref>
<ref id="B38">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cooper</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Garcia</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Petrovas</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Yamamoto</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Koup</surname> <given-names>R. A.</given-names>
</name>
<name>
<surname>Nabel</surname> <given-names>G. J.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>HIV-1 Causes CD4 Cell Death Through DNA-Dependent Protein Kinase During Viral Integration</article-title>. <source>Nature</source> <volume>498</volume>, <fpage>376</fpage>&#x2013;<lpage>379</lpage>. doi: <pub-id pub-id-type="doi">10.1038/nature12274</pub-id>
</citation>
</ref>
<ref id="B39">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Cosgrove</surname> <given-names>A. J.</given-names>
</name>
<name>
<surname>Nieduszynski</surname> <given-names>C. A.</given-names>
</name>
<name>
<surname>Donaldson</surname> <given-names>A. D.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Ku Complex Controls the Replication Time of DNA in Telomere Regions</article-title>. <source>Genes Dev.</source> <volume>16</volume> (<issue>19</issue>), <fpage>2485</fpage>&#x2013;<lpage>2490</lpage>. doi: <pub-id pub-id-type="doi">10.1101/gad.231602</pub-id>
</citation>
</ref>
<ref id="B40">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Critchlow</surname> <given-names>S. E.</given-names>
</name>
<name>
<surname>Jackson</surname> <given-names>S. P.</given-names>
</name>
</person-group> (<year>1998</year>). <article-title>DNA End-Joining: From Yeast to Man</article-title>. <source>Trends Biochem. Sci.</source> <volume>23</volume>, <fpage>394</fpage>&#x2013;<lpage>398</lpage>. doi: <pub-id pub-id-type="doi">10.1016/S0968-0004(98)01284-5</pub-id>
</citation>
</ref>
<ref id="B41">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Crow</surname> <given-names>Y. J.</given-names>
</name>
<name>
<surname>Chase</surname> <given-names>D. S.</given-names>
</name>
<name>
<surname>Lowenstein Schmidt</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Szynkiewicz</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Forte</surname> <given-names>G. M. A.</given-names>
</name>
<name>
<surname>Gornall</surname> <given-names>H. L.</given-names>
</name>
<etal/>
</person-group>. (<year>2015</year>). <article-title>Characterization of Human Disease Phenotypes Associated With Mutations in TREX1, RNASEH2A, RNASEH2B, RNASEH2C, SAMHD1, ADAR, and IFIH1</article-title>. <source>Am. J. Med. Genet. Part A</source> <volume>167</volume>, <fpage>296</fpage>&#x2013;<lpage>312</lpage>. doi: <pub-id pub-id-type="doi">10.1002/ajmg.a.36887</pub-id>
</citation>
</ref>
<ref id="B42">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Crow</surname> <given-names>Y. J.</given-names>
</name>
<name>
<surname>Hayward</surname> <given-names>B. E.</given-names>
</name>
<name>
<surname>Parmar</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Robins</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Leitch</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Ali</surname> <given-names>M.</given-names>
</name>
<etal/>
</person-group>. (<year>2006</year>a). <article-title>Mutations in the Gene Encoding the 3&#x2032;-5&#x2032; DNA Exonuclease TREX1 Cause Aicardi-Gouti&#xe8;res Syndrome at the AGS1 Locus</article-title>. <source>Nat. Genet.</source> <volume>38</volume>, <fpage>917</fpage>&#x2013;<lpage>920</lpage>. doi: <pub-id pub-id-type="doi">10.1038/ng1845</pub-id>
</citation>
</ref>
<ref id="B43">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Crow</surname> <given-names>Y. J.</given-names>
</name>
<name>
<surname>Leitch</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Hayward</surname> <given-names>B. E.</given-names>
</name>
<name>
<surname>Garner</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Parmar</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Griffith</surname> <given-names>E.</given-names>
</name>
<etal/>
</person-group>. (<year>2006</year>b). <article-title>Mutations in Genes Encoding Ribonuclease H2 Subunits Cause Aicardi-Gouti&#xe8;res Syndrome and Mimic Congenital Viral Brain Infection</article-title>. <source>Nat. Genet.</source> <volume>38</volume> (<issue>8</issue>), <fpage>910</fpage>&#x2013;<lpage>916</lpage>. doi: <pub-id pub-id-type="doi">10.1038/ng1842</pub-id>
</citation>
</ref>
<ref id="B44">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Daniel</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Greger</surname> <given-names>J. G.</given-names>
</name>
<name>
<surname>Katz</surname> <given-names>R. A.</given-names>
</name>
<name>
<surname>Taganov</surname> <given-names>K. D.</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Kappes</surname> <given-names>J. C.</given-names>
</name>
<etal/>
</person-group>. (<year>2004</year>). <article-title>Evidence That Stable Retroviral Transduction and Cell Survival Following DNA Integration Depend on Components of the Nonhomologous End Joining Repair Pathway</article-title>. <source>J. Virol.</source> <volume>78</volume> (<issue>16</issue>), <fpage>8573</fpage>&#x2013;<lpage>8581</lpage>. doi: <pub-id pub-id-type="doi">10.1128/JVI.78.16.8573-8581.2004</pub-id>
</citation>
</ref>
<ref id="B45">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Daniel</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Katz</surname> <given-names>R. A.</given-names>
</name>
<name>
<surname>Skalka</surname> <given-names>A. M.</given-names>
</name>
</person-group> (<year>1999</year>). <article-title>A Role for DNA-PK in Retroviral DNA Integration</article-title>. <source>Science</source> <volume>284</volume> (<issue>5414</issue>), <fpage>644</fpage>&#x2013;<lpage>647</lpage>. doi: <pub-id pub-id-type="doi">10.1126/science.284.5414.644</pub-id>
</citation>
</ref>
<ref id="B46">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Davis</surname> <given-names>A. J.</given-names>
</name>
<name>
<surname>Lee</surname> <given-names>K.-J.</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>D. J.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>The N-Terminal Region of the DNA-Dependent Protein Kinase Catalytic Subunit Is Required for Its DNA Double-Stranded Break-Mediated Activation*</article-title>. <source>J. Biol. Chem.</source> <volume>288</volume>, <fpage>7037</fpage>&#x2013;<lpage>7046</lpage>. doi: <pub-id pub-id-type="doi">10.1074/jbc.M112.434498</pub-id>
</citation>
</ref>
<ref id="B47">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dell&#x2019;oste</surname> <given-names>V.</given-names>
</name>
<name>
<surname>Gatti</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Gugliesi</surname> <given-names>F.</given-names>
</name>
<name>
<surname>De Andrea</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Bawadekar</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Lo Cigno</surname> <given-names>I.</given-names>
</name>
<etal/>
</person-group>. (<year>2014</year>). <article-title>Innate Nuclear Sensor IFI16 Translocates Into the Cytoplasm During the Early Stage of <italic>In Vitro</italic> Human Cytomegalovirus Infection and Is Entrapped in the Egressing Virions During the Late Stage</article-title>. <source>J. Virol.</source> <volume>88</volume>, <fpage>6970</fpage>&#x2013;<lpage>6982</lpage>. doi: <pub-id pub-id-type="doi">10.1128/JVI.00384-14</pub-id>
</citation>
</ref>
<ref id="B48">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dempsey</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Bowie</surname> <given-names>A. G.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Innate Immune Recognition of DNA: A Recent History</article-title>. <source>Virology</source> <volume>479-480</volume>, <fpage>146</fpage>&#x2013;<lpage>152</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.virol.2015.03.013</pub-id>
</citation>
</ref>
<ref id="B49">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dobbs</surname> <given-names>T. A.</given-names>
</name>
<name>
<surname>Tainer</surname> <given-names>J. A.</given-names>
</name>
<name>
<surname>Lees-Miller</surname> <given-names>S. P.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>A Structural Model for Regulation of NHEJ by DNA-PKcs Autophosphorylation</article-title>. <source>DNA Repair</source> <volume>9</volume>, <fpage>1307</fpage>&#x2013;<lpage>1314</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.dnarep.2010.09.019</pub-id>
</citation>
</ref>
<ref id="B50">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Doherty</surname> <given-names>A. J.</given-names>
</name>
<name>
<surname>Jackson</surname> <given-names>S. P.</given-names>
</name>
</person-group> (<year>2001</year>). <article-title>DNA Repair: How Ku Makes Ends Meet</article-title>. <source>Curr. Biol.</source> <volume>11</volume>, <fpage>R920</fpage>&#x2013;<lpage>R924</lpage>. doi: <pub-id pub-id-type="doi">10.1016/S0960-9822(01)00555-3</pub-id>
</citation>
</ref>
<ref id="B51">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Donnelly</surname> <given-names>R. P.</given-names>
</name>
<name>
<surname>Kotenko</surname> <given-names>S. V.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>Interferon-Lambda: A New Addition to an Old Family</article-title>. <source>J. Interferon Cytokine Res.</source> <volume>30</volume>, <fpage>555</fpage>&#x2013;<lpage>564</lpage>. doi: <pub-id pub-id-type="doi">10.1089/jir.2010.0078</pub-id>
</citation>
</ref>
<ref id="B52">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dutertre</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Vagner</surname> <given-names>S.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>DNA-Damage Response RNA-Binding Proteins (DDRBPs): Perspectives From a New Class of Proteins and Their RNA Targets</article-title>. <source>J. Mol. Biol.</source> <volume>429</volume>, <fpage>3139</fpage>&#x2013;<lpage>3145</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.jmb.2016.09.019</pub-id>
</citation>
</ref>
<ref id="B53">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dynan</surname> <given-names>W. S.</given-names>
</name>
<name>
<surname>Yoo</surname> <given-names>S.</given-names>
</name>
</person-group> (<year>1998</year>). <article-title>Interaction of Ku Protein and DNA-Dependent Protein Kinase Catalytic Subunit With Nucleic Acids</article-title>. <source>Nucleic Acids Res.</source> <volume>26</volume>, <fpage>1551</fpage>&#x2013;<lpage>1559</lpage>. doi: <pub-id pub-id-type="doi">10.1093/nar/26.7.1551</pub-id>
</citation>
</ref>
<ref id="B54">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Elde</surname> <given-names>N. C.</given-names>
</name>
<name>
<surname>Child</surname> <given-names>S. J.</given-names>
</name>
<name>
<surname>Eickbush</surname> <given-names>M. T.</given-names>
</name>
<name>
<surname>Kitzman</surname> <given-names>J. O.</given-names>
</name>
<name>
<surname>Rogers</surname> <given-names>K. S.</given-names>
</name>
<name>
<surname>Shendure</surname> <given-names>J.</given-names>
</name>
<etal/>
</person-group>. (<year>2012</year>). <article-title>Poxviruses Deploy Genomic Accordions to Adapt Rapidly Against Host Antiviral Defenses</article-title>. <source>Cell</source> <volume>150</volume>, <fpage>831</fpage>&#x2013;<lpage>841</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.cell.2012.05.049</pub-id>
</citation>
</ref>
<ref id="B55">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Emig-Agius</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Olivieri</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Pache</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Shih</surname> <given-names>H. L.</given-names>
</name>
<name>
<surname>Pustovalova</surname> <given-names>O.</given-names>
</name>
<name>
<surname>Bessarabova</surname> <given-names>M.</given-names>
</name>
<etal/>
</person-group>. (<year>2014</year>). <article-title>An Integrated Map of HIV-Human Protein Complexes That Facilitate Viral Infection</article-title>. <source>PLoS One</source> <volume>9</volume>, <fpage>e96687</fpage>. doi: <pub-id pub-id-type="doi">10.1371/journal.pone.0096687</pub-id>
</citation>
</ref>
<ref id="B56">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Engelman</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Englund</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Orenstein</surname> <given-names>J. M.</given-names>
</name>
<name>
<surname>Martin</surname> <given-names>M. A.</given-names>
</name>
<name>
<surname>Craigie</surname> <given-names>R.</given-names>
</name>
</person-group> (<year>1995</year>). <article-title>Multiple Effects of Mutations in Human Immunodeficiency Virus Type 1 Integrase on Viral Replication</article-title>. <source>J. Virol.</source> <volume>69</volume>, <fpage>2729</fpage>&#x2013;<lpage>2736</lpage>. doi: <pub-id pub-id-type="doi">10.1128/jvi.69.5.2729-2736.1995</pub-id>
</citation>
</ref>
<ref id="B57">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Errami</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Smider</surname> <given-names>V.</given-names>
</name>
<name>
<surname>Rathmell</surname> <given-names>W. K.</given-names>
</name>
<name>
<surname>He</surname> <given-names>D. M.</given-names>
</name>
<name>
<surname>Hendrickson</surname> <given-names>E. A.</given-names>
</name>
<name>
<surname>Zdzienicka</surname> <given-names>M. Z.</given-names>
</name>
<etal/>
</person-group>. (<year>1996</year>). <article-title>Ku86 Defines the Genetic Defect and Restores X-Ray Resistance and V(D)J Recombination to Complementation Group 5 Hamster Cell Mutants</article-title>. <source>Mol. Cell Biol.</source> <volume>16</volume>, <fpage>1519</fpage>&#x2013;<lpage>1526</lpage>. doi: <pub-id pub-id-type="doi">10.1128/MCB.16.4.1519</pub-id>
</citation>
</ref>
<ref id="B58">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fahy</surname> <given-names>A. S.</given-names>
</name>
<name>
<surname>Clark</surname> <given-names>R. H.</given-names>
</name>
<name>
<surname>Glyde</surname> <given-names>E. F.</given-names>
</name>
<name>
<surname>Smith</surname> <given-names>G. L.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Vaccinia Virus Protein C16 Acts Intracellularly to Modulate the Host Response and Promote Virulence</article-title>. <source>J. Gen. Virol.</source> <volume>89</volume> (<issue>Pt 10</issue>), <fpage>2377</fpage>&#x2013;<lpage>2387</lpage>. doi: <pub-id pub-id-type="doi">10.1099/vir.0.2008/004895-0</pub-id>
</citation>
</ref>
<ref id="B59">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Faure</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Calmels</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Desjobert</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Castroviejo</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Caumont-Sarcos</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Tarrago-Litvak</surname> <given-names>L.</given-names>
</name>
<etal/>
</person-group>. (<year>2005</year>). <article-title>HIV-1 Integrase Crosslinked Oligomers Are Active <italic>In Vitro</italic>
</article-title>. <source>Nucleic Acids Res.</source> <volume>33</volume>, <fpage>977</fpage>&#x2013;<lpage>986</lpage>. doi: <pub-id pub-id-type="doi">10.1093/nar/gki241</pub-id>
</citation>
</ref>
<ref id="B60">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fell</surname> <given-names>V. L.</given-names>
</name>
<name>
<surname>Schild-Poulter</surname> <given-names>C.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Ku Regulates Signaling to DNA Damage Response Pathways Through the Ku70 Von Willebrand A Domain</article-title>. <source>Mol. Cell. Biol.</source> <volume>32</volume> (<issue>1</issue>), <fpage>76</fpage>&#x2013;<lpage>87</lpage>. doi: <pub-id pub-id-type="doi">10.1128/MCB.05661-11</pub-id>
</citation>
</ref>
<ref id="B61">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fell</surname> <given-names>V. L.</given-names>
</name>
<name>
<surname>Schild-Poulter</surname> <given-names>C.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>The Ku Heterodimer: Function in DNA Repair and Beyond</article-title>. <source>Mutat. Res/Rev Mutat. Res.</source> <volume>763</volume>, <fpage>15</fpage>&#x2013;<lpage>29</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.mrrev.2014.06.002</pub-id>
</citation>
</ref>
<ref id="B62">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ferguson</surname> <given-names>B. J.</given-names>
</name>
<name>
<surname>Mansur</surname> <given-names>D. S.</given-names>
</name>
<name>
<surname>Peters</surname> <given-names>N. E.</given-names>
</name>
<name>
<surname>Ren</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Smith</surname> <given-names>G. L.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>DNA-PK Is a DNA Sensor for IRF-3-Dependent Innate Immunity</article-title>. <source>Elife</source> <volume>1</volume>, <fpage>e00047</fpage>. doi: <pub-id pub-id-type="doi">10.7554/eLife.00047</pub-id>
</citation>
</ref>
<ref id="B63">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fernandes-Alnemri</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Yu</surname> <given-names>J. W.</given-names>
</name>
<name>
<surname>Datta</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Alnemri</surname> <given-names>E. S.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>AIM2 Activates the Inflammasome and Cell Death in Response to Cytoplasmic DNA</article-title>. <source>Nature</source> <volume>458</volume>, <fpage>509</fpage>&#x2013;<lpage>513</lpage>. doi: <pub-id pub-id-type="doi">10.1038/nature07710</pub-id>
</citation>
</ref>
<ref id="B64">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Foster</surname> <given-names>S. S.</given-names>
</name>
<name>
<surname>Balestrini</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Petrini</surname> <given-names>J. H. J.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Functional Interplay of the Mre11 Nuclease and Ku in the Response to Replication-Associated DNA Damage</article-title>. <source>Mol. Cell. Biol.</source> <volume>31</volume> (<issue>21</issue>), <fpage>4379</fpage>&#x2013;<lpage>4389</lpage>. doi: <pub-id pub-id-type="doi">10.1128/MCB.05854-11</pub-id>
</citation>
</ref>
<ref id="B65">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fugmann</surname> <given-names>S. D.</given-names>
</name>
<name>
<surname>Lee</surname> <given-names>A. I.</given-names>
</name>
<name>
<surname>Shockett</surname> <given-names>P. E.</given-names>
</name>
<name>
<surname>Villey</surname> <given-names>I. J.</given-names>
</name>
<name>
<surname>Schatz</surname> <given-names>D. G.</given-names>
</name>
</person-group> (<year>2000</year>). <article-title>The RAG Proteins and V(D)J Recombination: Complexes, Ends, and Transposition</article-title>. <source>Annu. Rev. Immunol.</source> <volume>18</volume>, <fpage>495</fpage>&#x2013;<lpage>527</lpage>. doi: <pub-id pub-id-type="doi">10.1146/annurev.immunol.18.1.495</pub-id>
</citation>
</ref>
<ref id="B66">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fujimoto</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Ikuta</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Koike</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Koike</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Acetylation of Nuclear Localization Signal Controls Importin-Mediated Nuclear Transport of Ku70</article-title>. <source>bioRxiv</source>. doi: <pub-id pub-id-type="doi">10.1101/403485</pub-id>
</citation>
</ref>
<ref id="B67">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gao</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>Y.-T.</given-names>
</name>
<name>
<surname>Du</surname> <given-names>F.</given-names>
</name>
<name>
<surname>Aroh</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Yan</surname> <given-names>N.</given-names>
</name>
<etal/>
</person-group>. (<year>2013</year>). <article-title>Cyclic GMP-AMP Synthase Is an Innate Immune Sensor of HIV and Other Retroviruses</article-title>. <source>Science</source> <volume>341</volume>, <fpage>903</fpage>&#x2013;<lpage>906</lpage>. doi: <pub-id pub-id-type="doi">10.1126/science.1240933</pub-id>
</citation>
</ref>
<ref id="B68">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gell</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Jackson</surname> <given-names>S. P.</given-names>
</name>
</person-group> (<year>1999</year>). <article-title>Mapping of Protein-Protein Interactions Within the DNA-Dependent Protein Kinase Complex</article-title>. <source>Nucleic Acids Res.</source> <volume>27</volume>, <fpage>3494</fpage>&#x2013;<lpage>3502</lpage>. doi: <pub-id pub-id-type="doi">10.1093/nar/27.17.3494</pub-id>
</citation>
</ref>
<ref id="B69">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Giffin</surname> <given-names>W.</given-names>
</name>
<name>
<surname>Kwast-Welfeld</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Rodda</surname> <given-names>D. J.</given-names>
</name>
<name>
<surname>Pr&#xe9;fontaine</surname> <given-names>G. G.</given-names>
</name>
<name>
<surname>Traykova-Andonova</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>Y.</given-names>
</name>
<etal/>
</person-group>. (<year>1997</year>). <article-title>Sequence-Specific DNA Binding and Transcription Factor Phosphorylation by Ku Autoantigen/DNA-Dependent Protein Kinase: PHOSPHORYLATION OF Ser-527 OF THE RAT GLUCOCORTICOID RECEPTOR*</article-title>. <source>J. Biol. Chem.</source> <volume>272</volume>, <fpage>5647</fpage>&#x2013;<lpage>5658</lpage>. doi: <pub-id pub-id-type="doi">10.1074/jbc.272.9.5647</pub-id>
</citation>
</ref>
<ref id="B70">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Giffin</surname> <given-names>W.</given-names>
</name>
<name>
<surname>Torrance</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Rodda</surname> <given-names>D. J.</given-names>
</name>
<name>
<surname>Pr&#xe9;fontaine</surname> <given-names>G. G.</given-names>
</name>
<name>
<surname>Pope</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Hach&#xe9;</surname> <given-names>R. J. G.</given-names>
</name>
</person-group> (<year>1996</year>). <article-title>Sequence-Specific DNA Binding by Ku Autoantigen and Its Effects on Transcription</article-title>. <source>Nature</source> <volume>380</volume>, <fpage>265</fpage>&#x2013;<lpage>268</lpage>. doi: <pub-id pub-id-type="doi">10.1038/380265a0</pub-id>
</citation>
</ref>
<ref id="B71">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>G&#xf6;hring</surname> <given-names>F.</given-names>
</name>
<name>
<surname>Schwab</surname> <given-names>B. L.</given-names>
</name>
<name>
<surname>Nicotera</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Leist</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Fackelmayer</surname> <given-names>F. O.</given-names>
</name>
</person-group> (<year>1997</year>). <article-title>The Novel SAR-Binding Domain of Scaffold Attachment Factor A (SAF-A) Is a Target in Apoptotic Nuclear Breakdown</article-title>. <source>EMBO J.</source> <volume>16</volume> (<issue>24</issue>), <fpage>7361</fpage>&#x2013;<lpage>7371</lpage>. doi: <pub-id pub-id-type="doi">10.1093/emboj/16.24.7361</pub-id>
</citation>
</ref>
<ref id="B72">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gomez</surname> <given-names>J. A.</given-names>
</name>
<name>
<surname>Gama</surname> <given-names>V.</given-names>
</name>
<name>
<surname>Yoshida</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Sun</surname> <given-names>W.</given-names>
</name>
<name>
<surname>Hayes</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Leskov</surname> <given-names>K.</given-names>
</name>
<etal/>
</person-group>. (<year>2007</year>). <article-title>Bax-Inhibiting Peptides Derived From Ku70 and Cell-Penetrating Pentapeptides</article-title>. <source>Biochem. Soc. Trans.</source> <volume>35</volume>, <fpage>797</fpage>&#x2013;<lpage>801</lpage>. doi: <pub-id pub-id-type="doi">10.1042/BST0350797</pub-id>
</citation>
</ref>
<ref id="B73">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gong</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Jing</surname> <given-names>Y.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Apoptosis Induction Byhistone Deacetylase Inhibitors in Cancer Cells: Role of Ku70</article-title>. <source>Int. J. Mol. Sci.</source> <volume>20</volume> (<issue>7</issue>), <fpage>1601</fpage>. doi: <pub-id pub-id-type="doi">10.3390/ijms20071601</pub-id>
</citation>
</ref>
<ref id="B74">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>G&#xf6;rlich</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Mattaj</surname> <given-names>I. W.</given-names>
</name>
</person-group> (<year>1996</year>). <article-title>Nucleocytoplasmic Transport</article-title>. <source>Science</source> <volume>271</volume> (<issue>5255</issue>), <fpage>1513</fpage>&#x2013;<lpage>1519</lpage>. doi: <pub-id pub-id-type="doi">10.1126/science.271.5255.1513</pub-id>
</citation>
</ref>
<ref id="B75">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Grundy</surname> <given-names>G. J.</given-names>
</name>
<name>
<surname>Rulten</surname> <given-names>S. L.</given-names>
</name>
<name>
<surname>Zeng</surname> <given-names>Z.</given-names>
</name>
<name>
<surname>Arribas-Bosacoma</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Iles</surname> <given-names>N.</given-names>
</name>
<name>
<surname>Manley</surname> <given-names>K.</given-names>
</name>
<etal/>
</person-group>. (<year>2013</year>). <article-title>APLF Promotes the Assembly and Activity of Non-Homologous End Joining Protein Complexes</article-title>. <source>Embo J.</source> <volume>32</volume> (<issue>1</issue>), <fpage>112</fpage>&#x2013;<lpage>125</lpage>. doi: <pub-id pub-id-type="doi">10.1038/emboj.2012.304</pub-id>
</citation>
</ref>
<ref id="B76">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Gu</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Jin</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Gao</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Weaver</surname> <given-names>D. T.</given-names>
</name>
<name>
<surname>Alt</surname> <given-names>F. W.</given-names>
</name>
</person-group> (<year>1997</year>). <article-title>Ku70-Deficient Embryonic Stem Cells Have Increased Ionizing Radiosensitivity, Defective DNA End-Binding Activity, and Inability to Support V(D)J&#x2009;recombination</article-title>. <source>Proc. Natl. Acad. Sci.</source> <volume>94</volume>, <fpage>8076</fpage>&#x2013;<lpage>8081</lpage>. doi: <pub-id pub-id-type="doi">10.1073/pnas.94.15.8076</pub-id>
</citation>
</ref>
<ref id="B77">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hammarsten</surname> <given-names>O.</given-names>
</name>
<name>
<surname>Chu</surname> <given-names>G.</given-names>
</name>
</person-group> (<year>1998</year>). <article-title>DNA-Dependent Protein Kinase: DNA Binding and Activation in the Absence&#x2009;of&#x2009;Ku</article-title>. <source>Proc. Natl. Acad. Sci.</source> <volume>95</volume>, <fpage>525</fpage>&#x2013;<lpage>530</lpage>. doi: <pub-id pub-id-type="doi">10.1073/pnas.95.2.525</pub-id>
</citation>
</ref>
<ref id="B78">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Harper</surname> <given-names>J. W.</given-names>
</name>
<name>
<surname>Elledge</surname> <given-names>S. J.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>The DNA Damage Response: Ten Years After</article-title>. <source>Mol. Cell</source> <volume>28</volume>, <fpage>739</fpage>&#x2013;<lpage>745</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.molcel.2007.11.015</pub-id>
</citation>
</ref>
<ref id="B79">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hornung</surname> <given-names>V.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>AIM2 Recognizes Cytosolic dsDNA and Forms a Caspase-1-Activating Inflammasome With ASC</article-title>. <source>Nature</source> <volume>458</volume>, <fpage>514</fpage>&#x2013;<lpage>518</lpage>. doi: <pub-id pub-id-type="doi">10.1038/nature07725</pub-id>
</citation>
</ref>
<ref id="B80">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hoyte</surname> <given-names>A. C.</given-names>
</name>
<name>
<surname>Jamin</surname> <given-names>A. V.</given-names>
</name>
<name>
<surname>Koneru</surname> <given-names>P. C.</given-names>
</name>
<name>
<surname>Kobe</surname> <given-names>M. J.</given-names>
</name>
<name>
<surname>Larue</surname> <given-names>R. C.</given-names>
</name>
<name>
<surname>Fuchs</surname> <given-names>J. R.</given-names>
</name>
<etal/>
</person-group>. (<year>2017</year>). <article-title>Resistance to Pyridine-Based Inhibitor KF116 Reveals an&#xa0;Unexpected Role of Integrase in HIV-1 Gag-Pol Polyprotein Proteolytic&#xa0;Processing</article-title>. <source>J. Biol. Chem.</source> <volume>292</volume>, <fpage>19814</fpage>&#x2013;<lpage>19825</lpage>. doi: <pub-id pub-id-type="doi">10.1074/jbc.M117.816645</pub-id>
</citation>
</ref>
<ref id="B81">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Hultquist</surname> <given-names>J. F.</given-names>
</name>
<name>
<surname>Schumann</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Woo</surname> <given-names>J. M.</given-names>
</name>
<name>
<surname>Manganaro</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Mcgregor</surname> <given-names>M. J.</given-names>
</name>
<name>
<surname>Doudna</surname> <given-names>J.</given-names>
</name>
<etal/>
</person-group>. (<year>2016</year>). <article-title>A Cas9 Ribonucleoprotein Platform for Functional Genetic Studies of HIV-Host Interactions in Primary Human T Cells</article-title>. <source>Cell Rep.</source> <volume>17</volume>, <fpage>1438</fpage>&#x2013;<lpage>1452</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.celrep.2016.09.080</pub-id>
</citation>
</ref>
<ref id="B82">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Imamichi</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Bernbaum</surname> <given-names>J. G.</given-names>
</name>
<name>
<surname>Laverdure</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>Q.</given-names>
</name>
<name>
<surname>Highbarger</surname> <given-names>H.</given-names>
</name>
<etal/>
</person-group>. (<year>2021</year>). <article-title>Natural Occurring Polymorphisms in HIV-1 Integrase and RNase H Regulate Viral Release and Autoprocessing</article-title>. <source>J. Virol.</source> <fpage>Jvi0132321</fpage>. doi: <pub-id pub-id-type="doi">10.1128/jvi.01323-21</pub-id>
</citation>
</ref>
<ref id="B83">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Indiviglio</surname> <given-names>S. M.</given-names>
</name>
<name>
<surname>Bertuch</surname> <given-names>A. A.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>Ku&#x2019;s Essential Role in Keeping Telomeres Intact</article-title>. <source>Proc. Natl. Acad. Sci. U. S. A.</source> <volume>106</volume> (<issue>30</issue>), <fpage>12217</fpage>&#x2013;<lpage>12218</lpage>. doi: <pub-id pub-id-type="doi">10.1073/pnas.0906427106</pub-id>
</citation>
</ref>
<ref id="B84">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jackson</surname> <given-names>S. P.</given-names>
</name>
<name>
<surname>Bartek</surname> <given-names>J.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>The DNA-Damage Response in Human Biology and Disease</article-title>. <source>Nature</source> <volume>461</volume>, <fpage>1071</fpage>&#x2013;<lpage>1078</lpage>. doi: <pub-id pub-id-type="doi">10.1038/nature08467</pub-id>
</citation>
</ref>
<ref id="B85">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jackson</surname> <given-names>S. P.</given-names>
</name>
<name>
<surname>Jeggo</surname> <given-names>P. A.</given-names>
</name>
</person-group> (<year>1995</year>). <article-title>DNA Double-Strand Break Repair and V(D)J Recombination: Involvement of DNA-PK</article-title>. <source>Trends Biochem. Sci.</source> <volume>20</volume>, <fpage>412</fpage>&#x2013;<lpage>415</lpage>. doi: <pub-id pub-id-type="doi">10.1016/S0968-0004(00)89090-8</pub-id>
</citation>
</ref>
<ref id="B86">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jeanson</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Mouscadet</surname> <given-names>J.-F.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Ku Represses the HIV-1 Transcription: Identification of a Putative Ku Binding Site Homologous to the Mouse Mammary Tumor Virus Nre1 Sequence in the HIV-1 Long Terminal Repeat*</article-title>. <source>J. Biol. Chem.</source> <volume>277</volume>, <fpage>4918</fpage>&#x2013;<lpage>4924</lpage>. doi: <pub-id pub-id-type="doi">10.1074/jbc.M110830200</pub-id>
</citation>
</ref>
<ref id="B87">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kaczmarski</surname> <given-names>W.</given-names>
</name>
<name>
<surname>Khan</surname> <given-names>S. A.</given-names>
</name>
</person-group> (<year>1993</year>). <article-title>Lupus Autoantigen Ku Protein Binds HIV-1 TAR RNA <italic>In Vitro</italic>
</article-title>. <source>Biochem. Biophys. Res. Commun.</source> <volume>196</volume>, <fpage>935</fpage>&#x2013;<lpage>942</lpage>. doi: <pub-id pub-id-type="doi">10.1006/bbrc.1993.2339</pub-id>
</citation>
</ref>
<ref id="B88">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kaisho</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Akira</surname> <given-names>S.</given-names>
</name>
</person-group> (<year>2006</year>). <article-title>Toll-Like Receptor Function and Signaling</article-title>. <source>J.&#xa0;Allergy Clin. Immunol.</source> <volume>117</volume>, <fpage>979</fpage>&#x2013;<lpage>987</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.jaci.2006.02.023</pub-id>
</citation>
</ref>
<ref id="B89">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kawai</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Akira</surname> <given-names>S.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>The Roles of TLRs, RLRs and NLRs in Pathogen Recognitionint</article-title>. <source>Int. Immunol.</source> <volume>21</volume> (<issue>4</issue>), <fpage>317</fpage>&#x2013;<lpage>337</lpage>. doi: <pub-id pub-id-type="doi">10.1093/intimm/dxp017</pub-id>
</citation>
</ref>
<ref id="B90">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Keating</surname> <given-names>S. E.</given-names>
</name>
<name>
<surname>Baran</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Bowie</surname> <given-names>A. G.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Cytosolic DNA Sensors Regulating Type I Interferon Induction</article-title>. <source>Trends Immunol.</source> <volume>32</volume>, <fpage>574</fpage>&#x2013;<lpage>581</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.it.2011.08.004</pub-id>
</citation>
</ref>
<ref id="B91">
<citation citation-type="book">
<person-group person-group-type="author">
<name>
<surname>Keijzers</surname> <given-names>G.</given-names>
</name>
</person-group> (<year>2018</year>). &#x201c;<article-title>Ku70 and Ku80,&#x201d;</article-title> in <source>Encyclopedia of Signaling Molecules</source>. Ed. <person-group person-group-type="editor">
<name>
<surname>Choi</surname> <given-names>S.</given-names>
</name>
</person-group> (<publisher-loc>Cham</publisher-loc>: <publisher-name>Springer International Publishing</publisher-name>), <fpage>2781</fpage>&#x2013;<lpage>2786</lpage>.</citation>
</ref>
<ref id="B92">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kerur</surname> <given-names>N.</given-names>
</name>
<name>
<surname>Veettil</surname> <given-names>M.V.</given-names>
</name>
<name>
<surname>Sharma-Walia</surname> <given-names>N.</given-names>
</name>
<name>
<surname>Bottero</surname> <given-names>V.</given-names>
</name>
<name>
<surname>Sadagopan</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Otageri</surname> <given-names>P.</given-names>
</name>
<etal/>
</person-group>. (<year>2011</year>). <article-title>IFI16 Acts as a Nuclear Pathogen Sensor to Induce the Inflammasome in Response to Kaposi Sarcoma-Associated Herpesvirus Infection</article-title>. <source>Cell Host Microbe</source> <volume>9</volume>, <fpage>363</fpage>&#x2013;<lpage>375</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.chom.2011.04.008</pub-id>
</citation>
</ref>
<ref id="B93">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kim</surname> <given-names>K.-B.</given-names>
</name>
<name>
<surname>Kim</surname> <given-names>D.-W.</given-names>
</name>
<name>
<surname>Park</surname> <given-names>J. W.</given-names>
</name>
<name>
<surname>Jeon</surname> <given-names>Y.-J.</given-names>
</name>
<name>
<surname>Kim</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Rhee</surname> <given-names>S.</given-names>
</name>
<etal/>
</person-group>. (<year>2014</year>). <article-title>Inhibition of Ku70 Acetylation by INHAT Subunit SET/TAF-I&#x3b2; Regulates Ku70-Mediated DNA Damage Response</article-title>. <source>Cell. Mol. Life Sci.</source> <volume>71</volume>, <fpage>2731</fpage>&#x2013;<lpage>2745</lpage>. doi: <pub-id pub-id-type="doi">10.1007/s00018-013-1525-8</pub-id>
</citation>
</ref>
<ref id="B94">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kim</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Pazhoor</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Bao</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>Z.</given-names>
</name>
<name>
<surname>Hanabuchi</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Facchinetti</surname> <given-names>V.</given-names>
</name>
<etal/>
</person-group>. (<year>2010</year>). <article-title>Aspartate-Glutamate-Alanine-Histidine Box Motif (DEAH)/RNA Helicase A Helicases Sense Microbial DNA in Human Plasmacytoid Dendritic Cells</article-title>. <source>Proc. Natl. Acad. Sci.</source> <volume>107</volume>, <fpage>15181</fpage>&#x2013;<lpage>15186</lpage>. doi: <pub-id pub-id-type="doi">10.1073/pnas.1006539107</pub-id>
</citation>
</ref>
<ref id="B95">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Knyazhanskaya</surname> <given-names>E.</given-names>
</name>
<name>
<surname>Anisenko</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Shadrina</surname> <given-names>O.</given-names>
</name>
<name>
<surname>Kalinina</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Zatsepin</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Zalevsky</surname> <given-names>A.</given-names>
</name>
<etal/>
</person-group>. (<year>2019</year>). <article-title>NHEJ Pathway Is Involved in Post-Integrational DNA Repair Due to Ku70 Binding to HIV-1 Integrase</article-title>. <source>Retrovirology</source> <volume>16</volume>, <fpage>30</fpage>. doi: <pub-id pub-id-type="doi">10.1186/s12977-019-0492-z</pub-id>
</citation>
</ref>
<ref id="B96">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Knyazhanskaya</surname> <given-names>E. S.</given-names>
</name>
<name>
<surname>Shadrina</surname> <given-names>O. A.</given-names>
</name>
<name>
<surname>Anisenko</surname> <given-names>A. N.</given-names>
</name>
<name>
<surname>Gottikh</surname> <given-names>M. B.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Role of DNA-Dependent Protein Kinase in the HIV-1 Replication Cycle</article-title>. <source>Mol. Biol.</source> <volume>50</volume>, <fpage>567</fpage>&#x2013;<lpage>579</lpage>. doi: <pub-id pub-id-type="doi">10.1134/S0026893316040075</pub-id>
</citation>
</ref>
<ref id="B97">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Koike</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Dimerization, Translocation and Localization of Ku70 and Ku80 Proteins</article-title>. <source>J. Radiat. Res.</source> <volume>43</volume>, <fpage>223</fpage>&#x2013;<lpage>236</lpage>. doi: <pub-id pub-id-type="doi">10.1269/jrr.43.223</pub-id>
</citation>
</ref>
<ref id="B98">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Koike</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Ikuta</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Miyasaka</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Shiomi</surname> <given-names>T.</given-names>
</name>
</person-group> (<year>1999</year>a). <article-title>Ku80 can Translocate to the Nucleus Independent of the Translocation of Ku70 Using Its Own Nuclear Localization Signal</article-title>. <source>Oncogene</source> <volume>18</volume>, <fpage>7495</fpage>&#x2013;<lpage>7505</lpage>. doi: <pub-id pub-id-type="doi">10.1038/sj.onc.1203247</pub-id>
</citation>
</ref>
<ref id="B99">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Koike</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Ikuta</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Miyasaka</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Shiomi</surname> <given-names>T.</given-names>
</name>
</person-group> (<year>1999</year>b). <article-title>The Nuclear Localization Signal of the Human Ku70 Is a Variant Bipartite Type Recognized by the Two Components of Nuclear Pore-Targeting Complex</article-title>. <source>Exp. Cell Res.</source> <volume>250</volume>, <fpage>401</fpage>&#x2013;<lpage>413</lpage>. doi: <pub-id pub-id-type="doi">10.1006/excr.1999.4507</pub-id>
</citation>
</ref>
<ref id="B100">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Koike</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Shiomi</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Koike</surname> <given-names>A.</given-names>
</name>
</person-group> (<year>2000</year>). <article-title>Ku70 Can Translocate to the Nucleus Independent of Ku80 Translocation and DNA-PK Autophosphorylation</article-title>. <source>Biochem. Biophys. Res. Commun.</source> <volume>276</volume>, <fpage>1105</fpage>&#x2013;<lpage>1111</lpage>. doi: <pub-id pub-id-type="doi">10.1006/bbrc.2000.3567</pub-id>
</citation>
</ref>
<ref id="B101">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Koike</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Yutoku</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Koike</surname> <given-names>A.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Cloning of Canine Ku80 and Its Localization and Accumulation at DNA Damage Sites</article-title>. <source>FEBS Open Bio</source> <volume>7</volume>, <fpage>1854</fpage>&#x2013;<lpage>1863</lpage>. doi: <pub-id pub-id-type="doi">10.1002/2211-5463.12311</pub-id>
</citation>
</ref>
<ref id="B102">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kotenko</surname> <given-names>S. V.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>IFN-&#x3bb;s</article-title>. <source>Curr. Opin. Immunol.</source> <volume>23</volume>, <fpage>583</fpage>&#x2013;<lpage>590</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.coi.2011.07.007</pub-id>
</citation>
</ref>
<ref id="B103">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kotenko</surname> <given-names>S. V.</given-names>
</name>
<name>
<surname>Gallagher</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Baurin</surname> <given-names>V. V.</given-names>
</name>
<name>
<surname>Lewis-Antes</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Shen</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Shah</surname> <given-names>N. K.</given-names>
</name>
<etal/>
</person-group>. (<year>2003</year>). <article-title>IFN-&#x3bb;s Mediate Antiviral Protection Through a Distinct Class II Cytokine Receptor Complex</article-title>. <source>Nat. Immunol.</source> <volume>4</volume>, <fpage>69</fpage>&#x2013;<lpage>77</lpage>. doi: <pub-id pub-id-type="doi">10.1038/ni875</pub-id>
</citation>
</ref>
<ref id="B104">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lamaa</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Le Bras</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Skuli</surname> <given-names>N.</given-names>
</name>
<name>
<surname>Britton</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Frit</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Calsou</surname> <given-names>P.</given-names>
</name>
<etal/>
</person-group>. (<year>2016</year>). <article-title>A Novel Cytoprotective Function for the DNA Repair Protein Ku in Regulating P53 mRNA Translation and Function</article-title>. <source>EMBO Rep.</source> <volume>17</volume> (<issue>4</issue>), <fpage>508</fpage>&#x2013;<lpage>518</lpage>. doi: <pub-id pub-id-type="doi">10.15252/embr.201541181</pub-id>
</citation>
</ref>
<ref id="B105">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lee</surname> <given-names>M. S.</given-names>
</name>
<name>
<surname>Kim</surname> <given-names>Y.-J.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>Signaling Pathways Downstream of Pattern-Recognition Receptors and Their Cross Talk</article-title>. <source>Annu. Rev. Biochem.</source> <volume>76</volume>, <fpage>447</fpage>&#x2013;<lpage>480</lpage>. doi: <pub-id pub-id-type="doi">10.1146/annurev.biochem.76.060605.122847</pub-id>
</citation>
</ref>
<ref id="B106">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lesbats</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Engelman</surname> <given-names>A. N.</given-names>
</name>
<name>
<surname>Cherepanov</surname> <given-names>P.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Retroviral DNA Integration</article-title>. <source>Chem. Rev.</source> <volume>116</volume>, <fpage>12730</fpage>&#x2013;<lpage>12757</lpage>. doi: <pub-id pub-id-type="doi">10.1021/acs.chemrev.6b00125</pub-id>
</citation>
</ref>
<ref id="B107">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Diner</surname> <given-names>B. A.</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Cristea</surname> <given-names>I. M.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Acetylation Modulates Cellular Distribution and DNA Sensing Ability of Interferon-Inducible Protein IFI16</article-title>. <source>Proc. Natl. Acad. Sci.</source> <volume>109</volume>, <fpage>10558</fpage>&#x2013;<lpage>10563</lpage>. doi: <pub-id pub-id-type="doi">10.1073/pnas.1203447109</pub-id>
</citation>
</ref>
<ref id="B108">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Frederick</surname> <given-names>K. M.</given-names>
</name>
<name>
<surname>Haverland</surname> <given-names>N. A.</given-names>
</name>
<name>
<surname>Ciborowski</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Belshan</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>2016</year>a). <article-title>Investigation of the HIV-1 Matrix Interactome During Virus Replication</article-title>. <source>Prot. Clin. Appl.</source> <volume>10</volume> (<issue>2</issue>), <fpage>156</fpage>&#x2013;<lpage>163</lpage>. doi: <pub-id pub-id-type="doi">10.1002/prca.201400189</pub-id>
</citation>
</ref>
<ref id="B109">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Zheng</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Cong</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Li</surname> <given-names>J.</given-names>
</name>
<etal/>
</person-group>. (<year>2016</year>b). <article-title>Cytoplasm-Translocated Ku70/80 Complex Sensing of HBV DNA Induces Hepatitis-Associated Chemokine Secretion</article-title>. <source>Front. Immunol.</source> <volume>7</volume>, <elocation-id>569</elocation-id>. doi: <pub-id pub-id-type="doi">10.3389/fimmu.2016.00569</pub-id>
</citation>
</ref>
<ref id="B110">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname> <given-names>G. C.</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>S. H.</given-names>
</name>
<name>
<surname>Kim</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Nussenzweig</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Ouyang</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Wei</surname> <given-names>J.</given-names>
</name>
<etal/>
</person-group>. (<year>1995</year>). <article-title>Suppression of Heat-Induced Hsp70 Expression by the 70-kDa Subunit of the Human Ku Autoantigen</article-title>. <source>Proc. Natl. Acad Sci. U. S. A.</source> <volume>92</volume> (<issue>10</issue>), <fpage>4512</fpage>&#x2013;<lpage>4516</lpage>. doi: <pub-id pub-id-type="doi">10.1073/pnas.92.10.4512</pub-id>
</citation>
</ref>
<ref id="B111">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lucero</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Gae</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Taccioli</surname> <given-names>G. E.</given-names>
</name>
</person-group> (<year>2003</year>). <article-title>Novel Localization of the DNA-PK Complex in Lipid Rafts: A Putative Role in the Signal Transduction Pathway of the Ionizing Radiation Response</article-title>. <source>J. Biol. Chem.</source> <volume>278</volume>, <fpage>22136</fpage>&#x2013;<lpage>22143</lpage>. doi: <pub-id pub-id-type="doi">10.1074/jbc.M301579200</pub-id>
</citation>
</ref>
<ref id="B112">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lu</surname> <given-names>Y.-F.</given-names>
</name>
<name>
<surname>Goldstein</surname> <given-names>D. B.</given-names>
</name>
<name>
<surname>Urban</surname> <given-names>T. J.</given-names>
</name>
<name>
<surname>Bradrick</surname> <given-names>S. S.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Interferon-&#x3bb;4 Is a Cell-Autonomous Type III Interferon Associated With Pre-Treatment Hepatitis C Virus Burden</article-title>. <source>Virology</source> <volume>476</volume>, <fpage>334</fpage>&#x2013;<lpage>340</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.virol.2014.12.020</pub-id>
</citation>
</ref>
<ref id="B113">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Lum</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Cristea</surname> <given-names>I.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Host Innate Immune Response and Viral Immune Evasion During Alphaherpesvirus Infection</article-title>. <source>Curr. Issues Mol. Biol.</source> <volume>42</volume>, <fpage>635</fpage>&#x2013;<lpage>686</lpage>. doi: <pub-id pub-id-type="doi">10.21775/cimb.042.635</pub-id>
</citation>
</ref>
<ref id="B114">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Makowski</surname> <given-names>M. M.</given-names>
</name>
<name>
<surname>Willems</surname> <given-names>E.</given-names>
</name>
<name>
<surname>Jansen</surname> <given-names>P. W. T. C.</given-names>
</name>
<name>
<surname>Vermeulen</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Cross-Linking Immunoprecipitation-MS (xIP-MS): Topological Analysis of Chromatin-Associated Protein Complexes Using Single Affinity Purification*</article-title>. <source>Mol. Cell. Proteomics</source> <volume>15</volume>, <fpage>854</fpage>&#x2013;<lpage>865</lpage>. doi: <pub-id pub-id-type="doi">10.1074/mcp.M115.053082</pub-id>
</citation>
</ref>
<ref id="B115">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Manic</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Maurin-Marlin</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Laurent</surname> <given-names>F.</given-names>
</name>
<name>
<surname>Vitale</surname> <given-names>I.</given-names>
</name>
<name>
<surname>Thierry</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Delelis</surname> <given-names>O.</given-names>
</name>
<etal/>
</person-group>. (<year>2013</year>). <article-title>Impact of the Ku Complex on HIV-1 Expression and Latency</article-title>. <source>PLoS One</source> <volume>8</volume>, <fpage>e69691</fpage>. doi: <pub-id pub-id-type="doi">10.1371/journal.pone.0069691</pub-id>
</citation>
</ref>
<ref id="B116">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Martinez</surname> <given-names>J. J.</given-names>
</name>
<name>
<surname>Seveau</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Veiga</surname> <given-names>E.</given-names>
</name>
<name>
<surname>Matsuyama</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Cossart</surname> <given-names>P.</given-names>
</name>
</person-group> (<year>2005</year>). <article-title>Ku70, a Component of DNA-Dependent Protein Kinase, Is a Mammalian Receptor for Rickettsia conorii</article-title>. <source>Cell</source> <volume>123</volume>, <fpage>1013</fpage>&#x2013;<lpage>1023</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.cell.2005.08.046</pub-id>
</citation>
</ref>
<ref id="B117">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Matheos</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Ruiz</surname> <given-names>M. T.</given-names>
</name>
<name>
<surname>Price</surname> <given-names>G. B.</given-names>
</name>
<name>
<surname>Zannis-Hadjopoulos</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Ku Antigen, an Origin-Specific Binding Protein That Associates With Replication Proteins, Is Required for Mammalian DNA Replication</article-title>. <source>Biochim. Biophys. Acta (BBA)  Gene Structure Expression</source> <volume>1578</volume>, <fpage>59</fpage>&#x2013;<lpage>72</lpage>. doi: <pub-id pub-id-type="doi">10.1016/S0167-4781(02)00497-9</pub-id>
</citation>
</ref>
<ref id="B118">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mazumder</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Plesca</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Kinter</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Almasan</surname> <given-names>A.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>Interaction of a Cyclin E Fragment With Ku70 Regulates Bax-Mediated Apoptosis</article-title>. <source>Mol. Cell. Biol.</source> <volume>27</volume> (<issue>9</issue>), <fpage>3511</fpage>&#x2013;<lpage>3520</lpage>. doi: <pub-id pub-id-type="doi">10.1128/MCB.01448-06</pub-id>
</citation>
</ref>
<ref id="B119">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Medzhitov</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Janeway</surname> <given-names>C.</given-names>
</name>
</person-group> (<year>1997</year>). <article-title>Innate Immunity: The Virtues of a Nonclonal System of Recognition</article-title>. <source>Cell</source> <volume>91</volume>, <fpage>295</fpage>&#x2013;<lpage>298</lpage>. doi: <pub-id pub-id-type="doi">10.1016/S0092-8674(00)80412-2</pub-id>
</citation>
</ref>
<ref id="B120">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Medzhitov</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Janeway</surname> <given-names>C.</given-names>
</name>
</person-group> (<year>2000</year>). <article-title>Innate Immunity</article-title>. <source>N. Engl. J. Med.</source> <volume>343</volume>, <fpage>338</fpage>&#x2013;<lpage>344</lpage>. doi: <pub-id pub-id-type="doi">10.1056/NEJM200008033430506</pub-id>
</citation>
</ref>
<ref id="B121">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Menon</surname> <given-names>V.</given-names>
</name>
<name>
<surname>Povirk</surname> <given-names>L. F.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>End-Processing Nucleases and Phosphodiesterases: An Elite Supporting Cast for the Non-Homologous End Joining Pathway of DNA Double-Strand Break Repair</article-title>. <source>DNA Repair</source> <volume>43</volume>, <fpage>57</fpage>&#x2013;<lpage>68</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.dnarep.2016.05.011</pub-id>
</citation>
</ref>
<ref id="B122">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mimori</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Akizuki</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Yamagata</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Inada</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Yoshida</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Homma</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>1981</year>). <article-title>Characterization of a High Molecular Weight Acidic Nuclear Protein Recognized by Autoantibodies in Sera From Patients With Polymyositis-Scleroderma Overlap</article-title>. <source>J. Clin. Invest.</source> <volume>68</volume>, <fpage>611</fpage>&#x2013;<lpage>620</lpage>. doi: <pub-id pub-id-type="doi">10.1172/JCI110295</pub-id>
</citation>
</ref>
<ref id="B123">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Miyoshi</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Kanoh</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Ishikawa</surname> <given-names>F.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>Fission Yeast Ku Protein Is Required for Recovery From DNA Replication Stress</article-title>. <source>Genes Cells</source> <volume>14</volume> (<issue>9</issue>), <fpage>1091</fpage>&#x2013;<lpage>1103</lpage>. doi: <pub-id pub-id-type="doi">10.1111/j.1365-2443.2009.01337.x</pub-id>
</citation>
</ref>
<ref id="B124">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mo</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Dynan</surname> <given-names>W. S.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Subnuclear Localization of Ku Protein: Functional Association With RNA Polymerase II Elongation Sites</article-title>. <source>Mol. Cell. Biol.</source> <volume>22</volume> (<issue>22</issue>), <fpage>8088</fpage>&#x2013;<lpage>8099</lpage>. doi: <pub-id pub-id-type="doi">10.1128/MCB.22.22.8088-8099.2002</pub-id>
</citation>
</ref>
<ref id="B125">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mogensen</surname> <given-names>T. H.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>Pathogen Recognition and Inflammatory Signaling in Innate Immune Defenses</article-title>. <source>Clin. Microbiol. Rev.</source> <volume>22</volume>, <fpage>240</fpage>&#x2013;<lpage>273</lpage>. doi: <pub-id pub-id-type="doi">10.1128/CMR.00046-08</pub-id>
</citation>
</ref>
<ref id="B126">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Monferran</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Muller</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Mourey</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Frit</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Salles</surname> <given-names>B.</given-names>
</name>
</person-group> (<year>2004</year>a). <article-title>The Membrane-Associated Form of the DNA Repair Protein Ku Is Involved in Cell Adhesion to Fibronectin</article-title>. <source>J. Mol. Biol.</source> <volume>337</volume>, <fpage>503</fpage>&#x2013;<lpage>511</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.jmb.2004.01.057</pub-id>
</citation>
</ref>
<ref id="B127">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Monferran</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Paupert</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Dauvillier</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Salles</surname> <given-names>B.</given-names>
</name>
<name>
<surname>Muller</surname> <given-names>C.</given-names>
</name>
</person-group> (<year>2004</year>b). <article-title>The Membrane Form of the DNA Repair Protein Ku Interacts at the Cell Surface With Metalloproteinase 9</article-title>. <source>EMBO J.</source> <volume>23</volume>, <fpage>3758</fpage>&#x2013;<lpage>3768</lpage>. doi: <pub-id pub-id-type="doi">10.1038/sj.emboj.7600403</pub-id>
</citation>
</ref>
<ref id="B128">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Monroe</surname> <given-names>K. M.</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>Z.</given-names>
</name>
<name>
<surname>Johnson</surname> <given-names>J. R.</given-names>
</name>
<name>
<surname>Geng</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Doitsh</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Krogan</surname> <given-names>N. J.</given-names>
</name>
<etal/>
</person-group>. (<year>2014</year>). <article-title>IFI16 DNA Sensor Is Required for Death of Lymphoid CD4 T Cells Abortively Infected With HIV</article-title>. <source>Science</source> <volume>343</volume>, <fpage>428</fpage>&#x2013;<lpage>432</lpage>. doi: <pub-id pub-id-type="doi">10.1126/science.1243640</pub-id>
</citation>
</ref>
<ref id="B129">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mulder</surname> <given-names>L. C. F.</given-names>
</name>
<name>
<surname>Muesing</surname> <given-names>M. A.</given-names>
</name>
</person-group> (<year>2000</year>). <article-title>Degradation of HIV-1 Integrase by the N-End Rule Pathway *</article-title>. <source>J. Biol. Chem.</source> <volume>275</volume>, <fpage>29749</fpage>&#x2013;<lpage>29753</lpage>. doi: <pub-id pub-id-type="doi">10.1074/jbc.M004670200</pub-id>
</citation>
</ref>
<ref id="B130">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Novac</surname> <given-names>O.</given-names>
</name>
<name>
<surname>Matheos</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Araujo</surname> <given-names>F. D.</given-names>
</name>
<name>
<surname>Price</surname> <given-names>G. B.</given-names>
</name>
<name>
<surname>Zannis-Hadjopoulos</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>2001</year>). <article-title>
<italic>In Vivo</italic> Association of Ku With Mammalian Origins of DNA Replication</article-title>. <source>Mol. Biol. Cell.</source> <volume>12</volume> (<issue>11</issue>), <fpage>3386</fpage>&#x2013;<lpage>3401</lpage>. doi: <pub-id pub-id-type="doi">10.1091/mbc.12.11.3386</pub-id>
</citation>
</ref>
<ref id="B131">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Nowsheen</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>E. S.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>The Intersection Between DNA Damage Response and Cell Death Pathways</article-title>. <source>Exp. Oncol.</source> <volume>34</volume>, <fpage>243</fpage>&#x2013;<lpage>254</lpage>.</citation>
</ref>
<ref id="B132">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Nussenzweig</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Da Costa Soares</surname> <given-names>V.</given-names>
</name>
<name>
<surname>Sanchez</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Sokol</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Nussenzweig</surname> <given-names>M. C.</given-names>
</name>
<etal/>
</person-group>. (<year>1996</year>). <article-title>Requirement for Ku80 in Growth and Immunoglobulin V(D)J Recombination</article-title>. <source>Nature</source> <volume>382</volume>, <fpage>551</fpage>&#x2013;<lpage>555</lpage>. doi: <pub-id pub-id-type="doi">10.1038/382551a0</pub-id>
</citation>
</ref>
<ref id="B133">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ono</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Tucker</surname> <given-names>P. W.</given-names>
</name>
<name>
<surname>Capra</surname> <given-names>J. D.</given-names>
</name>
</person-group> (<year>1996</year>). <article-title>Ku Is a General Inhibitor of DNA-Protein Complex Formation and Transcription</article-title>. <source>Mol. Immunol.</source> <volume>33</volume>, <fpage>787</fpage>&#x2013;<lpage>796</lpage>. doi: <pub-id pub-id-type="doi">10.1016/0161-5890(96)00030-2</pub-id>
</citation>
</ref>
<ref id="B134">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Paludan</surname> <given-names>S. R.</given-names>
</name>
<name>
<surname>Bowie</surname> <given-names>A. G.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Immune Sensing of DNA</article-title>. <source>Immunity</source> <volume>38</volume>, <fpage>870</fpage>&#x2013;<lpage>880</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.immuni.2013.05.004</pub-id>
</citation>
</ref>
<ref id="B135">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Park</surname> <given-names>S.-J.</given-names>
</name>
<name>
<surname>Ciccone</surname> <given-names>S. L. M.</given-names>
</name>
<name>
<surname>Freie</surname> <given-names>B.</given-names>
</name>
<name>
<surname>Kurimasa</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>D. J.</given-names>
</name>
<name>
<surname>Li</surname> <given-names>G. C.</given-names>
</name>
<etal/>
</person-group>. (<year>2004</year>). <article-title>A Positive Role for the Ku Complex in DNA Replication Following Strand Break Damage in Mammals*</article-title>. <source>J. Biol. Chem.</source> <volume>279</volume>, <fpage>6046</fpage>&#x2013;<lpage>6055</lpage>. doi: <pub-id pub-id-type="doi">10.1074/jbc.M311054200</pub-id>
</citation>
</ref>
<ref id="B136">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Passos</surname> <given-names>D. O.</given-names>
</name>
<name>
<surname>Li</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Rebensburg</surname> <given-names>S. V.</given-names>
</name>
<name>
<surname>Ghirlando</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Jeon</surname> <given-names>Y.</given-names>
</name>
<etal/>
</person-group>. (<year>2017</year>). <article-title>Cryo-EM Structures and Atomic Model of the HIV-1 Strand Transfer Complex Intasome</article-title>. <source>Sci. (New York NY)</source> <volume>355</volume>, <fpage>89</fpage>&#x2013;<lpage>92</lpage>. doi: <pub-id pub-id-type="doi">10.1126/science.aah5163</pub-id>
</citation>
</ref>
<ref id="B137">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Peters</surname> <given-names>N. E.</given-names>
</name>
<name>
<surname>Ferguson</surname> <given-names>B. J.</given-names>
</name>
<name>
<surname>Mazzon</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Fahy</surname> <given-names>A. S.</given-names>
</name>
<name>
<surname>Krysztofinska</surname> <given-names>E.</given-names>
</name>
<name>
<surname>Arribas-Bosacoma</surname> <given-names>R.</given-names>
</name>
<etal/>
</person-group>. (<year>2013</year>). <article-title>A Mechanism for the Inhibition of DNA-PK-Mediated DNA Sensing by a Virus</article-title>. <source>PLoS Pathog.</source> <volume>9</volume>, <fpage>e1003649</fpage>. doi: <pub-id pub-id-type="doi">10.1371/journal.ppat.1003649</pub-id>
</citation>
</ref>
<ref id="B138">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Peterson</surname> <given-names>S. E.</given-names>
</name>
<name>
<surname>Stellwagen</surname> <given-names>A. E.</given-names>
</name>
<name>
<surname>Diede</surname> <given-names>S. J.</given-names>
</name>
<name>
<surname>Singer</surname> <given-names>M. S.</given-names>
</name>
<name>
<surname>Haimberger</surname> <given-names>Z. W.</given-names>
</name>
<name>
<surname>Johnson</surname> <given-names>C. O.</given-names>
</name>
<etal/>
</person-group>. (<year>2001</year>). <article-title>The Function of a Stem-Loop in Telomerase RNA Is Linked to the DNA Repair Protein Ku</article-title>. <source>Nat. Genet.</source> <volume>27</volume>, <fpage>64</fpage>&#x2013;<lpage>67</lpage>. doi: <pub-id pub-id-type="doi">10.1038/83778</pub-id>
</citation>
</ref>
<ref id="B139">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pfingsten</surname> <given-names>J. S.</given-names>
</name>
<name>
<surname>Goodrich</surname> <given-names>K. J.</given-names>
</name>
<name>
<surname>Taabazuing</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Ouenzar</surname> <given-names>F.</given-names>
</name>
<name>
<surname>Chartrand</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Cech</surname> <given-names>T. R.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Mutually Exclusive Binding of Telomerase RNA and DNA by Ku Alters Telomerase Recruitment Model</article-title>. <source>Cell</source> <volume>148</volume>, <fpage>922</fpage>&#x2013;<lpage>932</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.cell.2012.01.033</pub-id>
</citation>
</ref>
<ref id="B140">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pichlmair</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Reis e Sousa</surname> <given-names>C.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>Innate Recognition of Viruses</article-title>. <source>Immunity</source> <volume>27</volume>, <fpage>370</fpage>&#x2013;<lpage>383</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.immuni.2007.08.012</pub-id>
</citation>
</ref>
<ref id="B141">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Radhakrishnan</surname> <given-names>S. K.</given-names>
</name>
<name>
<surname>Jette</surname> <given-names>N.</given-names>
</name>
<name>
<surname>Lees-Miller</surname> <given-names>S. P.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Non-Homologous End Joining: Emerging Themes and Unanswered Questions</article-title>. <source>DNA Repair</source> <volume>17</volume>, <fpage>2</fpage>&#x2013;<lpage>8</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.dnarep.2014.01.009</pub-id>
</citation>
</ref>
<ref id="B142">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rampakakis</surname> <given-names>E.</given-names>
</name>
<name>
<surname>Di Paola</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Zannis-Hadjopoulos</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Ku Is Involved in Cell Growth, DNA Replication and G1-S Transition</article-title>. <source>J. Cell Sci.</source> <volume>121</volume>, <fpage>590</fpage>&#x2013;<lpage>600</lpage>. doi: <pub-id pub-id-type="doi">10.1242/jcs.021352</pub-id>
</citation>
</ref>
<ref id="B143">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ribes-Zamora</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Mihalek</surname> <given-names>I.</given-names>
</name>
<name>
<surname>Lichtarge</surname> <given-names>O.</given-names>
</name>
<name>
<surname>Bertuch</surname> <given-names>A. A.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>Distinct Faces of the Ku Heterodimer Mediate DNA Repair and Telomeric Functions</article-title>. <source>Nat. Struct. Mol. Biol.</source> <volume>14</volume>, <fpage>301</fpage>&#x2013;<lpage>307</lpage>. doi: <pub-id pub-id-type="doi">10.1038/nsmb1214</pub-id>
</citation>
</ref>
<ref id="B144">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rice</surname> <given-names>G. I.</given-names>
</name>
<name>
<surname>Bond</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Asipu</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Brunette</surname> <given-names>R. L.</given-names>
</name>
<name>
<surname>Manfield</surname> <given-names>I. W.</given-names>
</name>
<name>
<surname>Carr</surname> <given-names>I. M.</given-names>
</name>
<etal/>
</person-group>. (<year>2009</year>). <article-title>Mutations Involved in Aicardi-Gouti&#xe8;res Syndrome Implicate SAMHD1 as Regulator of the Innate Immune Response</article-title>. <source>Nat. Genet.</source> <volume>41</volume>, <fpage>829</fpage>&#x2013;<lpage>832</lpage>. doi: <pub-id pub-id-type="doi">10.1038/ng.373</pub-id>
</citation>
</ref>
<ref id="B145">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rivera-Calzada</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Spagnolo</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Pearl</surname> <given-names>L. H.</given-names>
</name>
<name>
<surname>Llorca</surname> <given-names>O.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>Structural Model of Full-Length Human Ku70&#x2013;Ku80 Heterodimer and Its Recognition of DNA and DNA-PKcs</article-title>. <source>EMBO Rep.</source> <volume>8</volume>, <fpage>56</fpage>&#x2013;<lpage>62</lpage>. doi: <pub-id pub-id-type="doi">10.1038/sj.embor.7400847</pub-id>
</citation>
</ref>
<ref id="B146">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Roger</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Lugrin</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Le Roy</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Goy</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Mombelli</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Koessler</surname> <given-names>T.</given-names>
</name>
<etal/>
</person-group>. (<year>2011</year>). <article-title>Histone Deacetylase Inhibitors Impair Innate Immune Responses to Toll-Like Receptor Agonists and to Infection</article-title>. <source>Blood</source> <volume>117</volume>, <fpage>1205</fpage>&#x2013;<lpage>1217</lpage>. doi: <pub-id pub-id-type="doi">10.1182/blood-2010-05-284711</pub-id>
</citation>
</ref>
<ref id="B147">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rouse</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Jackson</surname> <given-names>S. P.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Interfaces Between the Detection, Signaling, and Repair of DNA Damage</article-title>. <source>Science</source> <volume>297</volume> (<issue>5581</issue>), <fpage>547</fpage>&#x2013;<lpage>551</lpage>. doi: <pub-id pub-id-type="doi">10.1126/science.1074740</pub-id>
</citation>
</ref>
<ref id="B148">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Roy</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Ghosh</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Kumar</surname> <given-names>B.</given-names>
</name>
<name>
<surname>Chandran</surname> <given-names>B.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>IFI16, a Nuclear Innate Immune DNA Sensor, Mediates Epigenetic Silencing of Herpesvirus Genomes by Its Association With H3K9 Methyltransferases SUV39H1 and GLP</article-title>. <source>eLife</source> <volume>8</volume>, <fpage>e49500</fpage>. doi: <pub-id pub-id-type="doi">10.7554/eLife.49500</pub-id>
</citation>
</ref>
<ref id="B149">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>S&#xe1;nchez</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Russell</surname> <given-names>P.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Ku Stabilizes Replication Forks in the Absence of Brc1</article-title>. <source>PLoS One</source> <volume>10</volume> (<issue>5</issue>), <fpage>e0126598</fpage>. doi: <pub-id pub-id-type="doi">10.1371/journal.pone.0126598</pub-id>
</citation>
</ref>
<ref id="B150">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Santos</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Obukhov</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Nekhai</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Bukrinsky</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Iordanskiy</surname> <given-names>S.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Virus-Producing Cells Determine the Host Protein Profiles of HIV-1 Virion Cores</article-title>. <source>Retrovirology</source> <volume>9</volume>, <fpage>65</fpage>. doi: <pub-id pub-id-type="doi">10.1186/1742-4690-9-65</pub-id>
</citation>
</ref>
<ref id="B151">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Satoh</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Reeves</surname> <given-names>W. H.</given-names>
</name>
</person-group> (<year>1995</year>). <article-title>Role of Free P70 (Ku) Subunit in Posttranslational Stabilization of Newly Synthesized P80 During DNA-Dependent Protein Kinase Assembly</article-title>. <source>Eur. J. Cell Biol.</source> <volume>66</volume>, <fpage>127</fpage>&#x2013;<lpage>135</lpage>.</citation>
</ref>
<ref id="B152">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sawada</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Sun</surname> <given-names>W.</given-names>
</name>
<name>
<surname>Hayes</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Leskov</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Boothman</surname> <given-names>D. A.</given-names>
</name>
<name>
<surname>Matsuyama</surname> <given-names>S.</given-names>
</name>
</person-group> (<year>2003</year>). <article-title>Ku70 Suppresses the Apoptotic Translocation of Bax to Mitochondria</article-title>. <source>Nat. Cell Biol.</source> <volume>5</volume>, <fpage>320</fpage>&#x2013;<lpage>329</lpage>. doi: <pub-id pub-id-type="doi">10.1038/ncb950</pub-id>
</citation>
</ref>
<ref id="B153">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Schild-Poulter</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Matheos</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Novac</surname> <given-names>O.</given-names>
</name>
<name>
<surname>Cui</surname> <given-names>B.</given-names>
</name>
<name>
<surname>Giffin</surname> <given-names>W.</given-names>
</name>
<name>
<surname>Ruiz</surname> <given-names>M. T.</given-names>
</name>
<etal/>
</person-group>. (<year>2003</year>). <article-title>Differential DNA Binding of Ku Antigen Determines Its Involvement in DNA Replication</article-title>. <source>DNA Cell Biol.</source> <volume>22</volume>, <fpage>65</fpage>&#x2013;<lpage>78</lpage>. doi: <pub-id pub-id-type="doi">10.1089/104454903321515887</pub-id>
</citation>
</ref>
<ref id="B154">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Schweitzer</surname> <given-names>C. J.</given-names>
</name>
<name>
<surname>Jagadish</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Haverland</surname> <given-names>N.</given-names>
</name>
<name>
<surname>Ciborowski</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Belshan</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Proteomic Analysis of Early HIV-1 Nucleoprotein Complexes</article-title>. <source>J. Proteome Res.</source> <volume>12</volume>, <fpage>559</fpage>&#x2013;<lpage>572</lpage>. doi: <pub-id pub-id-type="doi">10.1021/pr300869h</pub-id>
</citation>
</ref>
<ref id="B155">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Scully</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Panday</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Elango</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Willis</surname> <given-names>N. A.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>DNA Double-Strand Break Repair-Pathway Choice in Somatic Mammalian Cells</article-title>. <source>Nat. Rev. Mol. Cell Biol.</source> <volume>20</volume>, <fpage>698</fpage>&#x2013;<lpage>714</lpage>. doi: <pub-id pub-id-type="doi">10.1038/s41580-019-0152-0</pub-id>
</citation>
</ref>
<ref id="B156">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Scutts</surname> <given-names>S. R.</given-names>
</name>
<name>
<surname>Ember</surname> <given-names>S. W.</given-names>
</name>
<name>
<surname>Ren</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Ye</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Lovejoy</surname> <given-names>C. A.</given-names>
</name>
<name>
<surname>Mazzon</surname> <given-names>M.</given-names>
</name>
<etal/>
</person-group>. (<year>2018</year>). <article-title>DNA-PK Is Targeted by Multiple Vaccinia Virus Proteins to Inhibit DNA Sensing</article-title>. <source>Cell Rep.</source> <volume>25</volume>, <fpage>1953</fpage>&#x2013;<lpage>1965.e1954</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.celrep.2018.10.034</pub-id>
</citation>
</ref>
<ref id="B157">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shadrina</surname> <given-names>O.</given-names>
</name>
<name>
<surname>Garanina</surname> <given-names>I.</given-names>
</name>
<name>
<surname>Korolev</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Zatsepin</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Van Assche</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Daouad</surname> <given-names>F.</given-names>
</name>
<etal/>
</person-group>. (<year>2020</year>). <article-title>Analysis of RNA Binding Properties of Human Ku Protein Reveals Its Interactions With 7SK snRNA and Protein Components of 7SK snRNP Complex</article-title>. <source>Biochimie</source> <volume>171-172</volume>, <fpage>110</fpage>&#x2013;<lpage>123</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.biochi.2020.02.016</pub-id>
</citation>
</ref>
<ref id="B158">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shadrina</surname> <given-names>O. A.</given-names>
</name>
<name>
<surname>Knyazhanskaya</surname> <given-names>E. S.</given-names>
</name>
<name>
<surname>Korolev</surname> <given-names>S. P.</given-names>
</name>
<name>
<surname>Gottikh</surname> <given-names>M. B.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Host Proteins Ku and HMGA1 As Participants of HIV-1 Transcription</article-title>. <source>Acta Naturae</source> <volume>8</volume>, <fpage>34</fpage>&#x2013;<lpage>47</lpage>. doi: <pub-id pub-id-type="doi">10.32607/20758251-2016-8-1-34-47</pub-id>
</citation>
</ref>
<ref id="B159">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shao</surname> <given-names>R.-G.</given-names>
</name>
<name>
<surname>Cao</surname> <given-names>C.-X.</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Kohn</surname> <given-names>K. W.</given-names>
</name>
<name>
<surname>Wold</surname> <given-names>M. S.</given-names>
</name>
<name>
<surname>Pommier</surname> <given-names>Y.</given-names>
</name>
</person-group> (<year>1999</year>). <article-title>Replication-Mediated DNA Damage by Camptothecin Induces Phosphorylation of RPA by DNA-Dependent Protein Kinase and Dissociates RPA: DNA-PK Complexes</article-title>. <source>Embo J.</source> <volume>18</volume> (<issue>5</issue>), <fpage>1397</fpage>&#x2013;<lpage>1406</lpage>. doi: <pub-id pub-id-type="doi">10.1093/emboj/18.5.1397</pub-id>
</citation>
</ref>
<ref id="B160">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shao</surname> <given-names>Z.</given-names>
</name>
<name>
<surname>Flynn</surname> <given-names>R. A.</given-names>
</name>
<name>
<surname>Crowe</surname> <given-names>J. L.</given-names>
</name>
<name>
<surname>Zhu</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Liang</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Jiang</surname> <given-names>W.</given-names>
</name>
<etal/>
</person-group>. (<year>2020</year>). <article-title>DNA-PKcs has KU-Dependent Function in rRNA Processing and Haematopoiesis</article-title>. <source>Nature</source> <volume>579</volume>, <fpage>291</fpage>&#x2013;<lpage>296</lpage>. doi: <pub-id pub-id-type="doi">10.1038/s41586-020-2041-2</pub-id>
</citation>
</ref>
<ref id="B161">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sharma</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Fitzgerald</surname> <given-names>K. A.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Innate Immune Sensing of DNA</article-title>. <source>PLoS Pathog.</source> <volume>7</volume>, <fpage>e1001310</fpage>. doi: <pub-id pub-id-type="doi">10.1371/journal.ppat.1001310</pub-id>
</citation>
</ref>
<ref id="B162">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Shay</surname> <given-names>J. W.</given-names>
</name>
<name>
<surname>Wright</surname> <given-names>W. E.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Telomeres and Telomerase: Three Decades of Progress</article-title>. <source>Nat. Rev. Genet.</source> <volume>20</volume>, <fpage>299</fpage>&#x2013;<lpage>309</lpage>. doi: <pub-id pub-id-type="doi">10.1038/s41576-019-0099-1</pub-id>
</citation>
</ref>
<ref id="B163">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Singleton</surname> <given-names>B. K.</given-names>
</name>
<name>
<surname>Priestley</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Steingrimsdottir</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Gell</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Blunt</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Jackson</surname> <given-names>S. P.</given-names>
</name>
<etal/>
</person-group>. (<year>1997</year>). <article-title>Molecular and Biochemical Characterization of Xrs Mutants Defective in Ku80</article-title>. <source>Mol. Cell Biol.</source> <volume>17</volume>, <fpage>1264</fpage>&#x2013;<lpage>1273</lpage>. doi: <pub-id pub-id-type="doi">10.1128/MCB.17.3.1264</pub-id>
</citation>
</ref>
<ref id="B164">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Singleton</surname> <given-names>B. K.</given-names>
</name>
<name>
<surname>Torres-Arzayus</surname> <given-names>M. I.</given-names>
</name>
<name>
<surname>Rottinghaus</surname> <given-names>S. T.</given-names>
</name>
<name>
<surname>Taccioli</surname> <given-names>G. E.</given-names>
</name>
<name>
<surname>Jeggo</surname> <given-names>P. A.</given-names>
</name>
</person-group> (<year>1999</year>). <article-title>The C Terminus of Ku80 Activates the DNA-Dependent Protein Kinase Catalytic Subunit</article-title>. <source>Mol. Cell. Biol.</source> <volume>19</volume> (<issue>5</issue>), <fpage>3267</fpage>&#x2013;<lpage>3277</lpage>. doi: <pub-id pub-id-type="doi">10.1128/MCB.19.5.3267</pub-id>
</citation>
</ref>
<ref id="B165">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Spann</surname> <given-names>K. M.</given-names>
</name>
<name>
<surname>Tran</surname> <given-names>K.-C.</given-names>
</name>
<name>
<surname>Chi</surname> <given-names>B.</given-names>
</name>
<name>
<surname>Rabin</surname> <given-names>R. L.</given-names>
</name>
<name>
<surname>Collins</surname> <given-names>P. L.</given-names>
</name>
</person-group> (<year>2004</year>). <article-title>Suppression of the Induction of Alpha, Beta, and Gamma Interferons by the NS1 and NS2 Proteins of Human Respiratory Syncytial Virus in Human Epithelial Cells and Macrophages</article-title>. <source>J. Virol.</source> <volume>78</volume>, <fpage>4363</fpage>&#x2013;<lpage>4369</lpage>. doi: <pub-id pub-id-type="doi">10.1128/JVI.78.8.4363-4369.2004</pub-id>
</citation>
</ref>
<ref id="B166">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Stellwagen</surname> <given-names>A. E.</given-names>
</name>
<name>
<surname>Haimberger</surname> <given-names>Z. W.</given-names>
</name>
<name>
<surname>Veatch</surname> <given-names>J. R.</given-names>
</name>
<name>
<surname>Gottschling</surname> <given-names>D. E.</given-names>
</name>
</person-group> (<year>2003</year>). <article-title>Ku Interacts With Telomerase RNA to Promote Telomere Addition at Native and Broken Chromosome Ends</article-title>. <source>Genes Dev.</source> <volume>17</volume> (<issue>19</issue>), <fpage>2384</fpage>&#x2013;<lpage>2395</lpage>. doi: <pub-id pub-id-type="doi">10.1101/gad.1125903</pub-id>
</citation>
</ref>
<ref id="B167">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Studamire</surname> <given-names>B.</given-names>
</name>
<name>
<surname>Goff</surname> <given-names>S. P.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Host Proteins Interacting With the Moloney Murine Leukemia Virus Integrase: Multiple Transcriptional Regulators and Chromatin Binding Factors</article-title>. <source>Retrovirology</source> <volume>5</volume>, <fpage>48</fpage>. doi: <pub-id pub-id-type="doi">10.1186/1742-4690-5-48</pub-id>
</citation>
</ref>
<ref id="B168">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Subramanian</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Hada</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Opipari</surname> <given-names>A. W.</given-names>
</name>
<name>
<surname>Castle</surname> <given-names>V. P.</given-names>
</name>
<name>
<surname>Kwok</surname> <given-names>R. P. S.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>CREB-Binding Protein Regulates Ku70 Acetylation in Response to Ionization Radiation in Neuroblastoma</article-title>. <source>Mol. Cancer Res.</source> <volume>11</volume>, <fpage>173</fpage>. doi: <pub-id pub-id-type="doi">10.1158/1541-7786.MCR-12-0065</pub-id>
</citation>
</ref>
<ref id="B169">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Subramanian</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Opipari</surname> <given-names>A. W.</given-names>
</name>
<name>
<surname>Bian</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Castle</surname> <given-names>V. P.</given-names>
</name>
<name>
<surname>Kwok</surname> <given-names>R. P. S.</given-names>
</name>
</person-group> (<year>2005</year>). <article-title>Ku70 Acetylation Mediates Neuroblastoma Cell Death Induced by Histone Deacetylase Inhibitors</article-title>. <source>Proc. Natl. Acad. Sci. U. S. A.</source> <volume>102</volume>, <fpage>4842</fpage>. doi: <pub-id pub-id-type="doi">10.1073/pnas.0408351102</pub-id>
</citation>
</ref>
<ref id="B170">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sui</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>Q.</given-names>
</name>
<name>
<surname>Imamichi</surname> <given-names>T.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Cytoplasmic-Translocated Ku70 Senses Intracellular DNA and Mediates Interferon-Lambda1 Induction</article-title>. <source>Immunology</source> <volume>163</volume>, <fpage>323</fpage>&#x2013;<lpage>337</lpage>. doi: <pub-id pub-id-type="doi">10.1111/imm.13318</pub-id>
</citation>
</ref>
<ref id="B171">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sui</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Zhang</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>B. P. C.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>DNA&#x2013;dependent Protein Kinase in Telomere Maintenance and Protection</article-title>. <source>Cell. Mol. Biol. Lett.</source> <volume>25</volume>, <fpage>2</fpage>. doi: <pub-id pub-id-type="doi">10.1186/s11658-020-0199-0</pub-id>
</citation>
</ref>
<ref id="B172">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sui</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Zhou</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Imamichi</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Jiao</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Sherman</surname> <given-names>B. T.</given-names>
</name>
<name>
<surname>Lane</surname> <given-names>H. C.</given-names>
</name>
<etal/>
</person-group>. (<year>2017</year>). <article-title>STING Is an Essential Mediator of the Ku70-Mediated Production of IFN-&#x3bb;1 in Response to Exogenous DNA</article-title>. <source>Sci. Signal.</source> <volume>10</volume> (<issue>488</issue>), <fpage>1</fpage>&#x2013;<lpage>11</lpage>. doi: <pub-id pub-id-type="doi">10.1126/scisignal.aah5054</pub-id>
</citation>
</ref>
<ref id="B173">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sun</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Huang</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Mei</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Xu</surname> <given-names>F.</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Zhao</surname> <given-names>F.</given-names>
</name>
<etal/>
</person-group>. (<year>2021</year>). <article-title>A Nuclear Export Signal Is Required for cGAS to Sense Cytosolic DNA</article-title>. <source>Cell Rep.</source> <volume>34</volume>, <fpage>108586</fpage>. doi: <pub-id pub-id-type="doi">10.1016/j.celrep.2020.108586</pub-id>
</citation>
</ref>
<ref id="B174">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sun</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Wu</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Du</surname> <given-names>F.</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>X. G.</given-names>
</name>
<name>
<surname>Chen</surname> <given-names>Z. J.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Cyclic GMP-AMP Synthase Is a Cytosolic DNA Sensor That Activates the Type I Interferon Pathway</article-title>. <source>Science</source> <volume>339</volume>, <fpage>786</fpage>&#x2013;<lpage>791</lpage>. doi: <pub-id pub-id-type="doi">10.1126/science.1232458</pub-id>
</citation>
</ref>
<ref id="B175">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Su</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Zhan</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Zheng</surname> <given-names>C.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Evasion of Host Antiviral Innate Immunity by HSV-1, an Update</article-title>. <source>Virol. J.</source> <volume>13</volume>, <fpage>38</fpage>. doi: <pub-id pub-id-type="doi">10.1186/s12985-016-0495-5</pub-id>
</citation>
</ref>
<ref id="B176">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Suzuki</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Shindo</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Tase</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Kikuchi</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Shimizu</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Yamazaki</surname> <given-names>T.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>Solution Structures and DNA Binding Properties of the N-Terminal SAP Domains of SUMO E3 Ligases From Saccharomyces Cerevisiae and Oryza Sativa</article-title>. <source>Proteins</source> <volume>75</volume> (<issue>2</issue>), <fpage>336</fpage>&#x2013;<lpage>347</lpage>. doi: <pub-id pub-id-type="doi">10.1002/prot.22243</pub-id>
</citation>
</ref>
<ref id="B177">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Syedbasha</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Egli</surname> <given-names>A.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Interferon Lambda: Modulating Immunity in Infectious Diseases</article-title>. <source>Front. Immunol.</source> <volume>8</volume>, <elocation-id>119</elocation-id>. doi: <pub-id pub-id-type="doi">10.3389/fimmu.2017.00119</pub-id>
</citation>
</ref>
<ref id="B178">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Takaoka</surname> <given-names>A.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>DAI (DLM-1/ZBP1) Is a Cytosolic DNA Sensor and an Activator of Innate Immune Response</article-title>. <source>Nature</source> <volume>448</volume>, <fpage>501</fpage>&#x2013;<lpage>505</lpage>. doi: <pub-id pub-id-type="doi">10.1038/nature06013</pub-id>
</citation>
</ref>
<ref id="B179">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Takeuchi</surname> <given-names>O.</given-names>
</name>
<name>
<surname>Akira</surname> <given-names>S.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>Innate Immunity to Virus Infection</article-title>. <source>Immunol. Rev.</source> <volume>227</volume>, <fpage>75</fpage>&#x2013;<lpage>86</lpage>. doi: <pub-id pub-id-type="doi">10.1111/j.1600-065X.2008.00737.x</pub-id>
</citation>
</ref>
<ref id="B180">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Teixeira-Silva</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Ait Saada</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Hardy</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Iraqui</surname> <given-names>I.</given-names>
</name>
<name>
<surname>Nocente</surname> <given-names>M. C.</given-names>
</name>
<name>
<surname>Fr&#xe9;on</surname> <given-names>K.</given-names>
</name>
<etal/>
</person-group>. (<year>2017</year>). <article-title>The End-Joining Factor Ku Acts in the End-Resection of Double Strand Break-Free Arrested Replication Forks</article-title>. <source>Nat. Commun.</source> <volume>8</volume>, <fpage>1982</fpage>. doi: <pub-id pub-id-type="doi">10.1038/s41467-017-02144-5</pub-id>
</citation>
</ref>
<ref id="B181">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Thapar</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>J. L.</given-names>
</name>
<name>
<surname>Hammel</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Ye</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Liang</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Sun</surname> <given-names>C.</given-names>
</name>
<etal/>
</person-group>. (<year>2020</year>). <article-title>Mechanism of Efficient Double-Strand Break Repair by a Long Non-Coding RNA</article-title>. <source>Nucleic Acids Res.</source> <volume>48</volume>, <fpage>10953</fpage>&#x2013;<lpage>10972</lpage>. doi: <pub-id pub-id-type="doi">10.1093/nar/gkaa784</pub-id>
</citation>
</ref>
<ref id="B182">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Thompson</surname> <given-names>M. R.</given-names>
</name>
<name>
<surname>Kaminski</surname> <given-names>J. J.</given-names>
</name>
<name>
<surname>Kurt-Jones</surname> <given-names>E. A.</given-names>
</name>
<name>
<surname>Fitzgerald</surname> <given-names>K. A.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Pattern Recognition Receptors and the Innate Immune Response to Viral Infection</article-title>. <source>Viruses</source> <volume>3</volume>, <fpage>920</fpage>&#x2013;<lpage>940</lpage>. doi: <pub-id pub-id-type="doi">10.3390/v3060920</pub-id>
</citation>
</ref>
<ref id="B183">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Thompson</surname> <given-names>M. R.</given-names>
</name>
<name>
<surname>Sharma</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Atianand</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Jensen</surname> <given-names>S. B.</given-names>
</name>
<name>
<surname>Carpenter</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Knipe</surname> <given-names>D. M.</given-names>
</name>
<etal/>
</person-group>. (<year>2014</year>). <article-title>Interferon &#x3b3;-Inducible Protein (IFI) 16 Transcriptionally Regulates Type I Interferons and Other Interferon-Stimulated Genes and Controls the Interferon Response to Both DNA and RNA Viruses</article-title>. <source>J. Biol. Chem.</source> <volume>289</volume>, <fpage>23568</fpage>&#x2013;<lpage>23581</lpage>. doi: <pub-id pub-id-type="doi">10.1074/jbc.M114.554147</pub-id>
</citation>
</ref>
<ref id="B184">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ting</surname> <given-names>N. S. Y.</given-names>
</name>
<name>
<surname>Yu</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Pohorelic</surname> <given-names>B.</given-names>
</name>
<name>
<surname>Lees-Miller</surname> <given-names>S. P.</given-names>
</name>
<name>
<surname>Beattie</surname> <given-names>T. L.</given-names>
</name>
</person-group> (<year>2005</year>). <article-title>Human Ku70/80 Interacts Directly With hTR, the RNA Component of Human Telomerase</article-title>. <source>Nucleic Acids Res.</source> <volume>33</volume>, <fpage>2090</fpage>&#x2013;<lpage>2098</lpage>. doi: <pub-id pub-id-type="doi">10.1093/nar/gki342</pub-id>
</citation>
</ref>
<ref id="B185">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Tintori</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Brai</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Fallacara</surname> <given-names>A. L.</given-names>
</name>
<name>
<surname>Fazi</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Schenone</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Botta</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Protein&#x2013;protein Interactions and Human Cellular Cofactors as New Targets for HIV Therapy</article-title>. <source>Curr. Opin. Pharmacol.</source> <volume>18</volume>, <fpage>1</fpage>&#x2013;<lpage>8</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.coph.2014.06.005</pub-id>
</citation>
</ref>
<ref id="B186">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Tyagi</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Ochem</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Tyagi</surname> <given-names>M.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>DNA-Dependent Protein Kinase Interacts Functionally With the RNA Polymerase II Complex Recruited at the Human Immunodeficiency Virus (HIV) Long Terminal Repeat and Plays an Important Role in HIV Gene Expression</article-title>. <source>J. Gen. Virol.</source> <volume>92</volume> (<issue>Pt 7</issue>), <fpage>1710</fpage>&#x2013;<lpage>1720</lpage>. doi: <pub-id pub-id-type="doi">10.1099/vir.0.029587-0</pub-id>
</citation>
</ref>
<ref id="B187">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Unterholzner</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Bowie</surname> <given-names>A. G.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Innate DNA Sensing Moves to the Nucleus</article-title>. <source>Cell Host Microbe</source> <volume>9</volume>, <fpage>351</fpage>&#x2013;<lpage>353</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.chom.2011.05.001</pub-id>
</citation>
</ref>
<ref id="B188">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Unterholzner</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Keating</surname> <given-names>S. E.</given-names>
</name>
<name>
<surname>Baran</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Horan</surname> <given-names>K. A.</given-names>
</name>
<name>
<surname>Jensen</surname> <given-names>S. B.</given-names>
</name>
<name>
<surname>Sharma</surname> <given-names>S.</given-names>
</name>
<etal/>
</person-group>. (<year>2010</year>). <article-title>IFI16 Is an Innate Immune Sensor for Intracellular DNA</article-title>. <source>Nat. Immunol.</source> <volume>11</volume>, <fpage>997</fpage>&#x2013;<lpage>1004</lpage>. doi: <pub-id pub-id-type="doi">10.1038/ni.1932</pub-id>
</citation>
</ref>
<ref id="B189">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Uz&#xe9;</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Monneron</surname> <given-names>D.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>IL-28 and IL-29: Newcomers to the Interferon Family</article-title>. <source>Biochimie</source> <volume>89</volume>, <fpage>729</fpage>&#x2013;<lpage>734</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.biochi.2007.01.008</pub-id>
</citation>
</ref>
<ref id="B190">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Vincent</surname> <given-names>K. A.</given-names>
</name>
<name>
<surname>York-Higgins</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Quiroga</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Brown</surname> <given-names>P. O.</given-names>
</name>
</person-group> (<year>1990</year>). <article-title>Host Sequences Flanking the HIV Provirus</article-title>. <source>Nucleic Acids Res.</source> <volume>18</volume>, <fpage>6045</fpage>&#x2013;<lpage>6047</lpage>. doi: <pub-id pub-id-type="doi">10.1093/nar/18.20.6045</pub-id>
</citation>
</ref>
<ref id="B191">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Vink</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Groenink</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Elgersma</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Fouchier</surname> <given-names>R. A.</given-names>
</name>
<name>
<surname>Tersmette</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Plasterk</surname> <given-names>R. H.</given-names>
</name>
</person-group> (<year>1990</year>). <article-title>Analysis of the Junctions Between Human Immunodeficiency Virus Type 1 Proviral DNA and Human DNA</article-title>. <source>J. Virol.</source> <volume>64</volume>, <fpage>5626</fpage>&#x2013;<lpage>5627</lpage>. doi: <pub-id pub-id-type="doi">10.1128/jvi.64.11.5626-5627.1990</pub-id>
</citation>
</ref>
<ref id="B192">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Walker</surname> <given-names>J. R.</given-names>
</name>
<name>
<surname>Corpina</surname> <given-names>R. A.</given-names>
</name>
<name>
<surname>Goldberg</surname> <given-names>J.</given-names>
</name>
</person-group> (<year>2001</year>). <article-title>Structure of the Ku Heterodimer Bound to DNA and Its Implications for Double-Strand Break Repair</article-title>. <source>Nature</source> <volume>412</volume>, <fpage>607</fpage>&#x2013;<lpage>614</lpage>. doi: <pub-id pub-id-type="doi">10.1038/35088000</pub-id>
</citation>
</ref>
<ref id="B193">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Cortez</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Yazdi</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Neff</surname> <given-names>N.</given-names>
</name>
<name>
<surname>Elledge</surname> <given-names>S. J.</given-names>
</name>
<name>
<surname>Qin</surname> <given-names>J.</given-names>
</name>
</person-group> (<year>2000</year>). <article-title>BASC, a Super Complex of BRCA1-Associated Proteins Involved in the Recognition and Repair of Aberrant DNA Structures</article-title>. <source>Genes Dev.</source> <volume>14</volume>, <fpage>927</fpage>&#x2013;<lpage>939</lpage>.</citation>
</ref>
<ref id="B194">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Fu</surname> <given-names>Z.</given-names>
</name>
<name>
<surname>Li</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Liang</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Pei</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Hao</surname> <given-names>S.</given-names>
</name>
<etal/>
</person-group>. (<year>2021</year>). <article-title>Cytoplasmic DNA Sensing by KU Complex in Aged CD4+ T Cell Potentiates T Cell Activation and Aging-Related Autoimmune Inflammation</article-title>. <source>Immunity</source> <volume>54</volume> (<issue>4</issue>), <fpage>632</fpage>&#x2013;<lpage>647.e639</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.immuni.2021.02.003</pub-id>
</citation>
</ref>
<ref id="B195">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Kang</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Song</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Ma</surname> <given-names>L.</given-names>
</name>
<etal/>
</person-group>. (<year>2017</year>). <article-title>Ku70 Senses HTLV-1 DNA and Modulates HTLV-1 Replication</article-title>. <source>J. Immunol.</source> <volume>199</volume>, <fpage>2475</fpage>&#x2013;<lpage>2482</lpage>. doi: <pub-id pub-id-type="doi">10.4049/jimmunol.1700111</pub-id>
</citation>
</ref>
<ref id="B196">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Ni</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Zheng</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Hutt-Fletcher</surname> <given-names>L.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Herpes Simplex Virus 1 Protein Kinase US3 Hyperphosphorylates P65/RelA and Dampens NF-&#x3ba;B Activation</article-title>. <source>J. Virol.</source> <volume>88</volume> (<issue>14</issue>), <fpage>7941</fpage>&#x2013;<lpage>7951</lpage>. doi: <pub-id pub-id-type="doi">10.1128/JVI.03394-13</pub-id>
</citation>
</ref>
<ref id="B197">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Lin</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Zheng</surname> <given-names>C.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Herpes Simplex Virus 1 Serine/Threonine Kinase US3 Hyperphosphorylates IRF3 and Inhibits Beta Interferon Production</article-title>. <source>J. Virol.</source> <volume>87</volume> (<issue>23</issue>), <fpage>12814</fpage>&#x2013;<lpage>12827</lpage>. doi: <pub-id pub-id-type="doi">10.1128/JVI.02355-13</pub-id>
</citation>
</ref>
<ref id="B198">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Waninger</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Kuhen</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Hu</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Chatterton</surname> <given-names>J. E.</given-names>
</name>
<name>
<surname>Wong-Staal</surname> <given-names>F.</given-names>
</name>
<name>
<surname>Tang</surname> <given-names>H.</given-names>
</name>
</person-group> (<year>2004</year>). <article-title>Identification of Cellular Cofactors for Human Immunodeficiency Virus Replication via a Ribozyme-Based Genomics Approach</article-title>. <source>J. Virol.</source> <volume>78</volume> (<issue>23</issue>), <fpage>12829</fpage>&#x2013;<lpage>12837</lpage>. doi: <pub-id pub-id-type="doi">10.1128/JVI.78.23.12829-12837.2004</pub-id>
</citation>
</ref>
<ref id="B199">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Weterings</surname> <given-names>E.</given-names>
</name>
<name>
<surname>Gallegos</surname> <given-names>A. C.</given-names>
</name>
<name>
<surname>Dominick</surname> <given-names>L. N.</given-names>
</name>
<name>
<surname>Cooke</surname> <given-names>L. S.</given-names>
</name>
<name>
<surname>Bartels</surname> <given-names>T. N.</given-names>
</name>
<name>
<surname>Vagner</surname> <given-names>J.</given-names>
</name>
<etal/>
</person-group>. (<year>2016</year>). <article-title>A Novel Small Molecule Inhibitor of the DNA Repair Protein Ku70/80</article-title>. <source>DNA Repair</source> <volume>43</volume>, <fpage>98</fpage>&#x2013;<lpage>106</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.dnarep.2016.03.014</pub-id>
</citation>
</ref>
<ref id="B200">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wood</surname> <given-names>A. M.</given-names>
</name>
<name>
<surname>Laster</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Rice</surname> <given-names>E. L.</given-names>
</name>
<name>
<surname>Kosak</surname> <given-names>S. T.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>A Beginning of the End: New Insights Into the Functional Organization of Telomeres</article-title>. <source>Nucleus</source> <volume>6</volume>, <fpage>172</fpage>&#x2013;<lpage>178</lpage>. doi: <pub-id pub-id-type="doi">10.1080/19491034.2015.1048407</pub-id>
</citation>
</ref>
<ref id="B201">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xia</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Gao</surname> <given-names>P.</given-names>
</name>
<name>
<surname>Gao</surname> <given-names>G.</given-names>
</name>
<name>
<surname>Fan</surname> <given-names>Z.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>DNA Sensor cGAS-Mediated Immune Recognition</article-title>. <source>Protein Cell</source> <volume>7</volume> (<issue>11</issue>), <fpage>777</fpage>&#x2013;<lpage>791</lpage>. doi: <pub-id pub-id-type="doi">10.1007/s13238-016-0320-3</pub-id>
</citation>
</ref>
<ref id="B202">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Xing</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Ni</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>K.</given-names>
</name>
<name>
<surname>Lin</surname> <given-names>R.</given-names>
</name>
<name>
<surname>Zheng</surname> <given-names>C.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Herpes Simplex Virus 1-Encoded Tegument Protein VP16 Abrogates the Production of Beta Interferon (IFN) by Inhibiting NF-&#x3ba;B Activation and Blocking IFN Regulatory Factor 3 To Recruit Its Coactivator CBP</article-title>. <source>J. Virol.</source> <volume>87</volume> (<issue>17</issue>), <fpage>9788</fpage>&#x2013;<lpage>9801</lpage>. doi: <pub-id pub-id-type="doi">10.1128/JVI.01440-13</pub-id>
</citation>
</ref>
<ref id="B203">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yaneva</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Kowalewski</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Lieber</surname> <given-names>M. R.</given-names>
</name>
</person-group> (<year>1997</year>). <article-title>Interaction of DNA-Dependent Protein Kinase With DNA and With Ku: Biochemical and Atomic-Force Microscopy Studies</article-title>. <source>EMBO J.</source> <volume>16</volume>, <fpage>5098</fpage>&#x2013;<lpage>5112</lpage>. doi: <pub-id pub-id-type="doi">10.1093/emboj/16.16.5098</pub-id>
</citation>
</ref>
<ref id="B204">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yang</surname> <given-names>P.</given-names>
</name>
<name>
<surname>An</surname> <given-names>H.</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Wen</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Zheng</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Rui</surname> <given-names>Y.</given-names>
</name>
<etal/>
</person-group>. (<year>2010</year>). <article-title>The Cytosolic Nucleic Acid Sensor LRRFIP1 Mediates the Production of Type I Interferon via a [Beta]-Catenin-Dependent Pathway</article-title>. <source>Nat. Immunol.</source> <volume>11</volume>, <fpage>487</fpage>&#x2013;<lpage>494</lpage>. doi: <pub-id pub-id-type="doi">10.1038/ni.1876</pub-id>
</citation>
</ref>
<ref id="B205">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yoneyama</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Fujita</surname> <given-names>T.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Structural Mechanism of RNA Recognition by the RIG-I-Like Receptors</article-title>. <source>Immunity</source> <volume>29</volume>, <fpage>178</fpage>&#x2013;<lpage>181</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.immuni.2008.07.009</pub-id>
</citation>
</ref>
<ref id="B206">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yoneyama</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Fujita</surname> <given-names>T.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>RNA Recognition and Signal Transduction by RIG-I-Like Receptors</article-title>. <source>Immunol. Rev.</source> <volume>227</volume>, <fpage>54</fpage>&#x2013;<lpage>65</lpage>. doi: <pub-id pub-id-type="doi">10.1111/j.1600-065X.2008.00727.x</pub-id>
</citation>
</ref>
<ref id="B207">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yoneyama</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Fujita</surname> <given-names>T.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>Recognition of Viral Nucleic Acids in Innate Immunity</article-title>. <source>Rev. Med. Virol.</source> <volume>20</volume> (<issue>1</issue>), <fpage>4</fpage>&#x2013;<lpage>22</lpage>. doi: <pub-id pub-id-type="doi">10.1002/rmv.633</pub-id>
</citation>
</ref>
<ref id="B208">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yoo</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Dynan</surname> <given-names>W. S.</given-names>
</name>
</person-group> (<year>1998</year>). <article-title>Characterization of the RNA Binding Properties of Ku Protein</article-title>. <source>Biochemistry</source> <volume>37</volume>, <fpage>1336</fpage>&#x2013;<lpage>1343</lpage>. doi: <pub-id pub-id-type="doi">10.1021/bi972100w</pub-id>
</citation>
</ref>
<ref id="B209">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yoo</surname> <given-names>S.</given-names>
</name>
<name>
<surname>Kimzey</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Dynan</surname> <given-names>W. S.</given-names>
</name>
</person-group> (<year>1999</year>). <article-title>Photocross-Linking of an Oriented DNA Repair Complex: Ku BOUND AT A SINGLE DNA END*</article-title>. <source>J. Biol. Chem.</source> <volume>274</volume>, <fpage>20034</fpage>&#x2013;<lpage>20039</lpage>. doi: <pub-id pub-id-type="doi">10.1074/jbc.274.28.20034</pub-id>
</citation>
</ref>
<ref id="B210">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname> <given-names>X.</given-names>
</name>
<name>
<surname>Brann</surname> <given-names>T. W.</given-names>
</name>
<name>
<surname>Zhou</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Yang</surname> <given-names>J.</given-names>
</name>
<name>
<surname>Oguariri</surname> <given-names>R. M.</given-names>
</name>
<name>
<surname>Lidie</surname> <given-names>K. B.</given-names>
</name>
<etal/>
</person-group>. (<year>2011</year>a). <article-title>Cutting Edge: Ku70 Is a Novel Cytosolic DNA Sensor That Induces Type III Rather Than Type I IFN</article-title>. <source>J. Immunol.</source> <volume>186</volume>, <fpage>4541</fpage>&#x2013;<lpage>4545</lpage>. doi: <pub-id pub-id-type="doi">10.4049/jimmunol.1003389</pub-id>
</citation>
</ref>
<ref id="B211">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>He</surname> <given-names>Q.</given-names>
</name>
<name>
<surname>Hu</surname> <given-names>Z.</given-names>
</name>
<name>
<surname>Feng</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Fan</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Tang</surname> <given-names>Z.</given-names>
</name>
<etal/>
</person-group>. (<year>2016</year>b). <article-title>Long Noncoding RNA LINP1 Regulates Repair of DNA Double-Strand Breaks in Triple-Negative Breast Cancer</article-title>. <source>Nat. Struct. Mol. Biol.</source> <volume>23</volume>, <fpage>522</fpage>&#x2013;<lpage>530</lpage>. doi: <pub-id pub-id-type="doi">10.1038/nsmb.3211</pub-id>
</citation>
</ref>
<ref id="B212">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname> <given-names>Z.</given-names>
</name>
<name>
<surname>Kim</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Bao</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Facchinetti</surname> <given-names>V.</given-names>
</name>
<name>
<surname>Jung</surname> <given-names>S. Y.</given-names>
</name>
<name>
<surname>Ghaffari</surname> <given-names>A. A.</given-names>
</name>
<etal/>
</person-group>. (<year>2011</year>b). <article-title>DDX1, DDX21, and DHX36 Helicases Form a Complex With the Adaptor Molecule TRIF to Sense dsRNA in Dendritic Cells</article-title>. <source>Immunity</source> <volume>34</volume>, <fpage>866</fpage>&#x2013;<lpage>878</lpage>. doi: <pub-id pub-id-type="doi">10.1016/j.immuni.2011.03.027</pub-id>
</citation>
</ref>
<ref id="B213">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Su</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Zheng</surname> <given-names>C.</given-names>
</name>
<name>
<surname>Sandri-Goldin</surname> <given-names>R. M.</given-names>
</name>
</person-group> (<year>2016</year>a). <article-title>Herpes Simplex Virus 1 Serine Protease VP24 Blocks the DNA-Sensing Signal Pathway by Abrogating Activation of Interferon Regulatory Factor 3</article-title>. <source>J. Virol.</source> <volume>90</volume> (<issue>12</issue>), <fpage>5824</fpage>&#x2013;<lpage>5829</lpage>. doi: <pub-id pub-id-type="doi">10.1128/JVI.00186-16</pub-id>
</citation>
</ref>
<ref id="B214">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Yeruva</surname> <given-names>L.</given-names>
</name>
<name>
<surname>Marinov</surname> <given-names>A.</given-names>
</name>
<name>
<surname>Prantner</surname> <given-names>D.</given-names>
</name>
<name>
<surname>Wyrick</surname> <given-names>P. B.</given-names>
</name>
<name>
<surname>Lupashin</surname> <given-names>V.</given-names>
</name>
<etal/>
</person-group>. (<year>2014</year>). <article-title>The DNA Sensor, Cyclic GMP&#x2013;AMP Synthase, Is Essential for Induction of IFN-&#x3b2; During Chlamydia Trachomatis Infection</article-title>. <source>J. Immunol.</source> <volume>193</volume>, <fpage>2394</fpage>&#x2013;<lpage>2404</lpage>. doi: <pub-id pub-id-type="doi">10.4049/jimmunol.1302718</pub-id>
</citation>
</ref>
<ref id="B215">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhang</surname> <given-names>Z.</given-names>
</name>
<name>
<surname>Yuan</surname> <given-names>B.</given-names>
</name>
<name>
<surname>Bao</surname> <given-names>M.</given-names>
</name>
<name>
<surname>Lu</surname> <given-names>N.</given-names>
</name>
<name>
<surname>Kim</surname> <given-names>T.</given-names>
</name>
<name>
<surname>Liu</surname> <given-names>Y.</given-names>
</name>
</person-group> (<year>2011</year>c). <article-title>The Helicase DDX41 Senses Intracellular DNA Mediated by the Adaptor STING in Dendritic Cells</article-title>. <source>Nat. Immunol.</source> <volume>12</volume>, <fpage>959</fpage>&#x2013;<lpage>965</lpage>. doi: <pub-id pub-id-type="doi">10.1038/ni.2091</pub-id>
</citation>
</ref>
<ref id="B216">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zheng</surname> <given-names>Y.</given-names>
</name>
<name>
<surname>Ao</surname> <given-names>Z.</given-names>
</name>
<name>
<surname>Wang</surname> <given-names>B.</given-names>
</name>
<name>
<surname>Jayappa</surname> <given-names>K. D.</given-names>
</name>
<name>
<surname>Yao</surname> <given-names>X.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Host Protein Ku70 Binds and Protects HIV-1 Integrase From Proteasomal Degradation and Is Required for HIV Replication</article-title>. <source>J. Biol. Chem.</source> <volume>286</volume>, <fpage>17722</fpage>&#x2013;<lpage>17735</lpage>. doi: <pub-id pub-id-type="doi">10.1074/jbc.M110.184739</pub-id>
</citation>
</ref>
<ref id="B217">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zhou</surname> <given-names>B.-B. S.</given-names>
</name>
<name>
<surname>Elledge</surname> <given-names>S. J.</given-names>
</name>
</person-group> (<year>2000</year>). <article-title>The DNA Damage Response: Putting Checkpoints in Perspective</article-title>. <source>Nature</source> <volume>408</volume>, <fpage>433</fpage>&#x2013;<lpage>439</lpage>. doi: <pub-id pub-id-type="doi">10.1038/35044005</pub-id>
</citation>
</ref>
</ref-list>
</back>
</article>