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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Chem.</journal-id>
<journal-title>Frontiers in Chemistry</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Chem.</abbrev-journal-title>
<issn pub-type="epub">2296-2646</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">902585</article-id>
<article-id pub-id-type="doi">10.3389/fchem.2022.902585</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Chemistry</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Conformational Selectivity of Merocyanine on Nanostructured Silver Films: Surface Enhanced Resonance Raman Scattering (SERRS) and Density Functional Theoretical (DFT) Study</article-title>
<alt-title alt-title-type="left-running-head">Das et al.</alt-title>
<alt-title alt-title-type="right-running-head">SERRS&#x2014;DFT Study of Merocyanine</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Das</surname>
<given-names>Abhishek</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1774069/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Chadha</surname>
<given-names>Ridhima</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1848281/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Mishra</surname>
<given-names>Amaresh</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1735864/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Maiti</surname>
<given-names>Nandita</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1730636/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Radiation &#x26; Photochemistry Division</institution>, <institution>Bhabha Atomic Research Centre</institution>, <addr-line>Mumbai</addr-line>, <country>India</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Department of Chemistry</institution>, <institution>Sambalpur University</institution>, <addr-line>Sambalpur</addr-line>, <country>Orissa</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Homi Bhabha National Institute</institution>, <addr-line>Mumbai</addr-line>, <country>India</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/706234/overview">Joydeep Chowdhury</ext-link>, Jadavpur University, India</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/704543/overview">Daniel Aranda</ext-link>, University of Malaga, Spain</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1592195/overview">Marilena Ricci</ext-link>, University of Florence, Italy</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Nandita Maiti, <email>nanditab@barc.gov.in</email>
<email>nanbis@gmail.com</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Analytical Chemistry, a section of the journal Frontiers in Chemistry</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>13</day>
<month>06</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>10</volume>
<elocation-id>902585</elocation-id>
<history>
<date date-type="received">
<day>23</day>
<month>03</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>25</day>
<month>05</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2022 Das, Chadha, Mishra and Maiti.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Das, Chadha, Mishra and Maiti</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>In this study, detailed structural and vibrational analysis of merocyanine has been investigated using Raman, surface enhanced Raman scattering (SERS) and surface-enhanced resonance Raman scattering (SERRS). The Raman, SERS and SERRS studies aided by density functional theoretical (DFT) calculations clearly established the prevalence of the trans- and cis-conformers of the protonated form of merocyanine (MCH<sup>&#x2b;</sup>) in solid and acetonitrile solution. The binding characteristics of merocyanine adsorbed on nanostructured silver-coated films (SCFs) were investigated using excitation-dependent SERS, concentration-dependent SERRS and DFT studies. The conformers of merocyanine involved in the surface adsorption processes were recognized. The prominent marker bands observed at 1538 (ethylenic C&#x3d;C stretch) and 1133&#xa0;cm<sup>&#x2212;1</sup> (pyridinium C-N stretch) in the Raman spectrum of merocyanine in acetonitrile shifted to 1540 and 1126&#xa0;cm<sup>&#x2212;1</sup>, respectively on the nanostructured SCFs. The shift in the marker bands is associated with either the preferential binding of selective conformer or change in resonance equilibrium between the benzenoid and quinoid forms. The excitation wavelength dependent SERS spectrum infers that in addition to the major contribution from the electromagnetic enhancement, chemical (resonance) effect leads to the amplification of the 1540&#xa0;cm<sup>&#x2212;1</sup> band. The concentration-dependent SERRS study showed maximum enhancement for the nanostructured SCFs functionalized with 1&#xa0;&#x3bc;M concentration of merocyanine, indicative of monolayer coverage. For lower concentrations of merocyanine, the SERRS signal intensity reduced without any alteration in the peak positions. The SERRS study thus, revealed sub-nanomolar (0.1&#xa0;nM) sensing of merocyanine using nanostructured SCFs with the analytical enhancement factor (AEF) of &#x223c; 10<sup>10</sup> for the 1126&#xa0;cm<sup>&#x2212;1</sup> and 1540&#xa0;cm<sup>&#x2212;1</sup> Raman bands for MC concentration of 0.1&#xa0;nM. In this study, combination of SERRS and DFT have clearly established the predominance of trans-MCH<sup>&#x2b;</sup> on the nanostructured silver surface with minor contribution from cis-MCH<sup>&#x2b;</sup>, which remain exclusively bound to the surface <italic>via</italic> the phenoxyl ring O atom. This conformational surface selectivity of geometrical isomers of merocyanine using nanostructured surfaces can be further explored for energy efficient and economical separation of geometrical isomers.</p>
</abstract>
<kwd-group>
<kwd>merocyanine</kwd>
<kwd>surface-enhanced resonance Raman scattering (SERRS)</kwd>
<kwd>density functional theory (DFT</kwd>
<kwd>)</kwd>
<kwd>structural and vibrational analysis</kwd>
<kwd>conformational surface selectivity</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>Merocyanine (MC) dyes and their derivatives comprise an important class of heterocyclic compounds that consist of electron accepting and electron donating groups at the two terminals. These compounds exhibit remarkable solvatochromic behaviour (<xref ref-type="bibr" rid="B57">Murugan et al., 2011</xref>; <xref ref-type="bibr" rid="B53">Manzoni et al., 2016</xref>) displaying solvent-dependent hyperpolarizabilty (<xref ref-type="bibr" rid="B46">Levine et al., 1978</xref>; <xref ref-type="bibr" rid="B66">Reish et al., 2012</xref>; <xref ref-type="bibr" rid="B73">Siqueira et al., 2022</xref>) and have been used extensively in non-linear optics (<xref ref-type="bibr" rid="B84">W&#xfc;rthner et al., 2002</xref>). These dyes also find applicability in the field of medicine for diagnosis as non-invasive probes and as photosensitizers in photodynamic therapy (<xref ref-type="bibr" rid="B1">Allison et al., 2004</xref>; <xref ref-type="bibr" rid="B4">Bilici et al., 2021</xref>). The solvatochromic behavior of MC results in solvent-dependent shifts of the absorption maximum, which can be correlated to the variation between the two resonance structures, viz., the benzenoid (polar) and the quinoid (nonpolar) forms. The benzenoid form is predominant either in polar solvents or in solvents with high hydrogen bonding ability as well as large dielectric constant and the quinoid form is dominant in non polar solvents. NMR studies have shown that the protonated form (MCH<sup>&#x2b;</sup>) undergoes photo induced <italic>trans</italic>-<italic>cis</italic> isomerization with ultraviolet light irradiation and remains in equilibrium between the <italic>trans-</italic> and <italic>cis</italic>-isomers (<xref ref-type="bibr" rid="B74">Steiner et al., 1978</xref>). The deprotonated form (MC) remains in the more stable <italic>trans</italic>-conformation in water and does not undergo photochemical and thermal isomerization to the <italic>cis</italic>-isomer. Deprotonation of the photochemically produced <italic>cis</italic>-MCH<sup>&#x2b;</sup> can be readily converted to <italic>trans</italic>-MC either via photochemical or thermal process. The structural changes in the molecule following photo-excitation are often investigated using the resonance Raman scattering (RRS) technique (<xref ref-type="bibr" rid="B5">Biswas and Umapathy, 1998</xref>, <xref ref-type="bibr" rid="B6">Biswas and Umapathy, 2001</xref>; <xref ref-type="bibr" rid="B7">Biswas et al., 2002</xref>; <xref ref-type="bibr" rid="B60">Nikolenko et al., 2019</xref>; <xref ref-type="bibr" rid="B12">Carvalho and Pimenta, 2020</xref>). The major drawback of RRS is the huge fluorescence background from the molecule or associated impurities that often mask the Raman signal. The fluorescence background in RRS is usually overcome with SERS (Surface enhanced Raman scattering). SERS is a highly sensitive spectroscopic technique that in addition to the quenching of the fluorescence background leads to multifold intensity enhancement of the Raman bands from analytes adsorbed on the metal nanoparticles (NPs) surface (<xref ref-type="bibr" rid="B76">Thomas et al., 2005</xref>; <xref ref-type="bibr" rid="B10">Biswas et al., 2009</xref>; <xref ref-type="bibr" rid="B77">Thomas et al., 2010</xref>; <xref ref-type="bibr" rid="B71">Saviello et al., 2019</xref>; <xref ref-type="bibr" rid="B85">Yang et al., 2019</xref>; <xref ref-type="bibr" rid="B42">Langer et al., 2020</xref>; <xref ref-type="bibr" rid="B22">Das et al., 2021</xref>; <xref ref-type="bibr" rid="B24">Dhayagude et al., 2021</xref>). The intensity enhancement in SERS usually originates from two cooperative mechanisms, the &#x201c;long-range&#x201d; electromagnetic (EM) (<xref ref-type="bibr" rid="B83">Wu et al., 2008</xref>) and the &#x201c;short-range&#x201d; chemical (<xref ref-type="bibr" rid="B11">Campion et al., 1995</xref>) effect.</p>
<p>Silver (Ag) and gold (Au) nanoparticles (NPs) show huge SERS enhancement and are ideal candidates due to their encouraging physicochemical properties. The surface plasmon resonance (SPR) band of these noble metal NPs appear in the visible region and they display large scattering cross sections making them suitable for molecular labeling studies (<xref ref-type="bibr" rid="B35">Jain et al., 2007</xref>; <xref ref-type="bibr" rid="B34">Jacob et al., 2011</xref>; <xref ref-type="bibr" rid="B68">Rycenga et al., 2011</xref>; <xref ref-type="bibr" rid="B67">Ringe et al., 2013</xref>; <xref ref-type="bibr" rid="B15">Chadha et al., 2021b</xref>; <xref ref-type="bibr" rid="B19">Das and Maiti, 2022</xref>). SERS gains high sensitivity from plasmon-enhanced excitation and scattering, thereby allowing for rapid, non-invasive <italic>in situ</italic> detection of target molecules. Recently, many review articles have focused on the advantages, reliability and future developments of SERS (<xref ref-type="bibr" rid="B54">Med&#x159;&#xed;kov&#xe1; et al., 2019</xref>; <xref ref-type="bibr" rid="B28">Fan et al., 2020</xref>; <xref ref-type="bibr" rid="B42">Langer et al., 2020</xref>; <xref ref-type="bibr" rid="B64">P&#xe9;rez-Jim&#xe9;nez et al., 2020</xref>; <xref ref-type="bibr" rid="B47">Li et al., 2021</xref>; <xref ref-type="bibr" rid="B31">Han et al., 2022</xref>). Applications of the SERS technique in biochemical and medical analysis are being discussed (<xref ref-type="bibr" rid="B17">Chaloupkov&#xe1; et al., 2018</xref>; <xref ref-type="bibr" rid="B65">Ranc et al., 2018</xref>; <xref ref-type="bibr" rid="B86">Zong et al., 2018</xref>; <xref ref-type="bibr" rid="B75">Szaniawska and Kudelski, 2021</xref>). Lately, SERS is being used for studying in-situ surface-catalyzed chemical oxidation (<xref ref-type="bibr" rid="B32">Huang et al., 2010</xref>; <xref ref-type="bibr" rid="B38">Kang et al., 2013</xref>; <xref ref-type="bibr" rid="B13">Chadha et al., 2014</xref>; <xref ref-type="bibr" rid="B40">Kumar et al., 2019a</xref>) as well as charge rearrangement reactions (<xref ref-type="bibr" rid="B23">Dhayagude et al., 2016</xref>; <xref ref-type="bibr" rid="B20">Das et al., 2019</xref>). Traces of drugs (<xref ref-type="bibr" rid="B27">Edwin et al., 2017</xref>; <xref ref-type="bibr" rid="B41">Kumar et al., 2019b</xref>), toxic heavy metal ions (<xref ref-type="bibr" rid="B81">Wang et al., 2016</xref>; <xref ref-type="bibr" rid="B30">Guselnikova et al., 2017</xref>; <xref ref-type="bibr" rid="B14">Chadha et al., 2021a</xref>), insecticides (<xref ref-type="bibr" rid="B25">Dissanayake et al., 2019</xref>; <xref ref-type="bibr" rid="B52">Mane et al., 2020</xref>; <xref ref-type="bibr" rid="B16">Chadha et al., 2022</xref>), etc. can be detected using SERS, which also provides valuable structural and vibrational information pertaining to the metal-analyte interaction (<xref ref-type="bibr" rid="B78">Thomas et al., 2013</xref>; <xref ref-type="bibr" rid="B72">SenGupta et al., 2014</xref>; <xref ref-type="bibr" rid="B50">Maiti et al., 2015</xref>, <xref ref-type="bibr" rid="B51">Maiti et al., 2016</xref>; <xref ref-type="bibr" rid="B20">Das et al., 2019</xref>; <xref ref-type="bibr" rid="B56">Mirajkar et al., 2020</xref>). The advantages of RRS and SERS can be combined in surface-enhanced resonance Raman scattering (SERRS) (<xref ref-type="bibr" rid="B8">Biswas et al., 2006</xref>; <xref ref-type="bibr" rid="B9">Biswas et al., 2008</xref>; <xref ref-type="bibr" rid="B39">Kitahama and Ozaki, 2016</xref>; <xref ref-type="bibr" rid="B59">Nicolson et al., 2018</xref>; <xref ref-type="bibr" rid="B48">Litti et al., 2020</xref>) technique that displays very high sensitivity and selectivity.</p>
<p>In this study, the SERRS technique has been exploited for studying the binding characteristics of MC [4&#x27;-(hydroxystyryl)-4-propylpyridinium bromide] adsorbed on nanostructured silver-coated films (SCFs). The protonated form (MCH<sup>&#x2b;</sup>) contains a positively charged pyridinium ring and a neutral phenoxyl ring connecting the ethylenic C&#x3d;C bond that remains in equilibrium between the <italic>trans</italic>- and <italic>cis</italic>-conformers. The molecular structure of the <italic>trans</italic>- and <italic>cis</italic>-conformers of MCH<sup>&#x2b;</sup> is shown in <xref ref-type="fig" rid="F10">Scheme 1</xref>. The main objective of this study is to identify the most prevalent conformer of MCH<sup>&#x2b;</sup> in solid as well as solution and to recognize the species that is adsorbed on the nanostructured SCFs. In solution as well as on the nanostructured film surface, MCH<sup>&#x2b;</sup> may undergo deprotonation and remain as MC. The deprotonated form may also undergo <italic>trans</italic>-<italic>cis</italic> isomerization and exist either as benzenoid or quinoid as is shown in <xref ref-type="fig" rid="F10">Scheme 1</xref>. In order to identify the dominance of the <italic>trans</italic>-/<italic>cis</italic>-conformer of MCH<sup>&#x2b;</sup>/MC in solid, solution, nanostructured surface and to understand the binding characteristics; Raman, SERRS and DFT studies were performed. The binding characteristics were probed by monitoring the changes in the Raman spectral features measured on the nanostructured SCFs with respect to that in solid and solution. To the best of our knowledge, this is the first comprehensive report discussing the structural and vibrational features of MCH<sup>&#x2b;</sup>/MC adsorbed on nanostructured silver surface and identifying the predominant conformer on the surface. The experimental results are supported with DFT calculations. Earlier reports on the infrared reflection-absorption (<xref ref-type="bibr" rid="B33">Itoh et al., 1992</xref>), resonance Raman intensity analysis (<xref ref-type="bibr" rid="B45">Leng et al., 2004</xref>) and SERRS (<xref ref-type="bibr" rid="B79">Tsukada et al., 1989</xref>; <xref ref-type="bibr" rid="B55">Mineo and Itoh, 1991</xref>; <xref ref-type="bibr" rid="B61">Pajchrowski et al., 2007</xref>) studies of MC have indicated the presence of <italic>trans</italic>-conformation on the metal surface, which is in agreement with this study. Thus, multi-faceted application of MCH<sup>&#x2b;</sup>/MC in bio sciences, materials and chemistry has motivated the present study, with an aim to gain thorough understanding of its molecular level behavior on the nanostructured surface of SCFs.</p>
<fig id="F10" position="float">
<label>SCHEME 1</label>
<caption>
<p>Molecular structures of the <italic>trans</italic>- and <italic>cis</italic>-conformers of protonated (MCH<sup>&#x2b;</sup>) and deprotonated (MC) forms of merocyanine dye [4&#x27;-(hydroxystyryl)-4-propylpyridinium bromide].</p>
</caption>
<graphic xlink:href="fchem-10-902585-g010.tif"/>
</fig>
</sec>
<sec sec-type="materials|methods" id="s2">
<title>Materials and Methods</title>
<sec id="s2-1">
<title>Chemicals</title>
<p>Silver nitrate (AgNO<sub>3</sub>), formamide, acetonitrile, n-propylbromide, &#x3b3;-picoline, 4-hydroxybenzaldehyde and ethanol that were used for the synthesis of 4&#x27;-(hydroxystyryl)-4-propylpyridinium bromide (MCH<sup>&#x2b;</sup>) and nanostructured silver-coated films (SCFs) were obtained from S. D. fine chemicals, India. All the solutions and SCFs were kept in the dark to avoid any photochemical reaction.</p>
</sec>
<sec id="s2-2">
<title>Synthesis of 4&#x27;-(Hydroxystyryl)-4-Propylpyridinium Bromide (MCH<sup>&#x2b;</sup>)</title>
<p>4&#x27;-(hydroxystyryl)-4-propylpyridinium bromide (MCH<sup>&#x2b;</sup>) was prepared by the reaction of <italic>n</italic>-propylbromide with <italic>&#x3b3;</italic>-picoline followed by Knoevenagel condensation with 4-hydroxybenzaldehyde in ethanol. The dye was purified by recrystallization in ethanol. The synthetic protocol is shown in <xref ref-type="fig" rid="F11">Scheme 2</xref>.</p>
<fig id="F11" position="float">
<label>SCHEME 2</label>
<caption>
<p>Synthetic protocol of merocyanine dye (MCH<sup>&#x2b;</sup>).</p>
</caption>
<graphic xlink:href="fchem-10-902585-g011.tif"/>
</fig>
</sec>
<sec id="s2-3">
<title>Synthesis of Nanostructured Silver-Coated Film (SCFs)</title>
<p>Nanostructured silver-coated films (SCFs) were prepared by taking glass slides that were thoroughly cleaned with chromic acid, washed with Millipore water and then dried in oven. The clean glass slides were dipped in 5 &#xd7; 10<sup>&#x2013;2</sup>&#xa0;mol&#xa0;L<sup>&#x2212;1</sup> solution of AgNO<sub>3</sub> in formamide for two and half hours. Formamide reduces Ag<sup>&#x2b;</sup> ions to Ag<sup>0</sup> and the nanoparticles (NPs) formed get deposited onto the glass slides resulting in the formation of stable nanostructured SCFs (<xref ref-type="bibr" rid="B69">Sarkar et al., 2005</xref>; <xref ref-type="bibr" rid="B70">Sarkar et al., 2009</xref>; <xref ref-type="bibr" rid="B49">Maiti et al., 2013</xref>). MCH<sup>&#x2b;</sup>/MC functionalized SCFs were prepared by dipping the nanostructured SCFs in acetonitrile solutions of varying concentrations of MCH<sup>&#x2b;</sup>/MC for 15&#xa0;min. The functionalized SCFs were removed from the acetonitrile solution, washed thoroughly with Millipore water and then air-dried. The functionalized SCFs (MC-SCFs) were then characterized using Atomic Force Microscopy (AFM), UV-Visible absorption, SERS and SERRS.</p>
</sec>
<sec id="s2-4">
<title>Instrumentation</title>
<p>The surface morphology of the SCFs and MC-SCFs was analyzed using AFM (Model: A-100 AFM instrument, A.P.E. Research, Italy). All images were measured in non-contact mode using aluminum coated n-type silicon cantilever (HQ:CSC17/Al BS, &#x3bc;Masch, Germany) with the force constant, 0.18&#xa0;N/m and frequency, 13&#xa0;kHz. The radius of uncoated tip was 8&#xa0;nm with a height of 12&#x2013;18&#xa0;&#x3bc;m. The UV-Vis absorption spectra were recorded using a JASCO V-650 spectrophotometer. The Raman spectrum of solid MCH<sup>&#x2b;</sup> was recorded at room temperature (RT) by placing the powdered sample on a glass slide and collecting the scattered light at the 180&#xb0; scattering geometry with a &#xd7;50 LWD (long working distance) objective using the 785&#xa0;nm diode laser. For the Raman measurements of MCH<sup>&#x2b;</sup>/MC in acetonitrile solution, the sample was taken in a standard 1 &#xd7; 1&#xa0;cm<sup>2</sup> cuvette and the scattered light was collected at 180&#xb0; scattering geometry and the signal detected using a charge-coupled device (LabRAM HR800, Horiba Jobin Yvon, France) together with an edge filter for 785&#xa0;nm. The SERRS spectrum of MC-SCFs with varying MC concentrations was recorded at RT using the 514.5&#xa0;nm excitation line, from the Ar ion laser. The SERS spectrum for MC concentration of 1&#xa0;&#x3bc;M was measured at different excitation wavelengths with 632.8 (He-Ne) and 785&#xa0;nm (diode) lasers. The spectrometer was calibrated using the Raman spectrum of silicon wafer at 520&#xa0;cm<sup>&#x2212;1</sup>. All the Raman, SERS, and SERRS spectra were recorded with 600 grooves/mm grating. The laser power at the sample surface was 0.5, 1, and 10&#xa0;mW for the excitation wavelengths, 514.5, 632.8, and 785&#xa0;nm and the spectral resolution was found to be 1.6, 1.1, and 0.7 cm<sup>&#x2212;1</sup>, respectively. The diameter of the laser spot at the sample surface was 300, 200, and 500&#xa0;&#x3bc;m, respectively for the 514.5, 632.8, and 785&#xa0;nm excitation wavelengths.</p>
</sec>
</sec>
<sec id="s3">
<title>Computational Methods</title>
<p>In order to gain insight into the experimental Raman spectrum, the geometry of both the <italic>trans</italic>- and <italic>cis</italic>-conformers of MCH<sup>&#x2b;</sup> and MC were optimized using DFT [Gaussian 09 program (<xref ref-type="bibr" rid="B29">Frisch et al., 2009</xref>)] with B3LYP functional (<xref ref-type="bibr" rid="B2">Becke, 1993</xref>) and 6&#x2013;31&#x2b;G&#x2a; as well as DGDZVP basis sets. At the optimized geometry of each conformer of MCH<sup>&#x2b;</sup> and MC, the molecular vibrations were computed and the theoretically calculated vibrations were compared with the experimentally observed Raman spectrum in solid and solution. The molecular structure of the <italic>trans</italic>- and <italic>cis</italic>-conformers of MCH<sup>&#x2b;</sup> and MC was also optimized by considering the effect of acetonitrle as the solvent. At the optimized geometries, the time-dependent density functional theory (TDDFT) calculation was performed and the computed absorption spectrum for the <italic>trans</italic>- and <italic>cis</italic>-conformers of protonated and deprotonated forms in acetonitrile was compared with the experimental absorption spectrum of merocyanine recorded in acetonitrile. Geometry optimization was also performed for the simplistic model, viz, Ag<sub>4</sub> complexes of the <italic>trans</italic>- and <italic>cis</italic>-conformers of MCH<sup>&#x2b;</sup> and MC (<italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>trans</italic>-MC-Ag<sub>4,</sub> and <italic>cis</italic>-MC-Ag<sub>4</sub>), where LANL2DZ basis set was used for Ag. The TDDFT calculations and vibrational frequencies were computed at the optimized geometries of the complexes. The absence of imaginary frequency ensured that the optimized molecular structures correspond to local minimum on the potential energy surface and not to saddle points. The computed vibrations at the optimized geometries of the <italic>trans</italic>- and <italic>cis</italic>-conformers of MCH<sup>&#x2b;</sup> and MC and their Ag<sub>4</sub> complexes were then compared with the Raman spectrum of MCH<sup>&#x2b;</sup>/MC in solid and solution and the SERS spectrum. The computed absorption spectrum of the Ag<sub>4</sub> complexes of <italic>trans</italic>- and <italic>cis</italic>-conformers of MCH<sup>&#x2b;</sup> and MC was compared with the absorption spectrum of the merocyanine functionalized SCFs.</p>
</sec>
<sec sec-type="results|discussion" id="s4">
<title>Results and Discussion</title>
<sec id="s4-1">
<title>Computational Results</title>
<p>The <italic>trans</italic>- and <italic>cis</italic>-conformers of MCH<sup>&#x2b;</sup> in their ground electronic state (S<sub>0</sub>) were optimized using DFT (B3LYP) method with 6&#x2013;31&#x2b;G&#x2a; and DGDZVP basis sets. In order to know the relative stability of the <italic>trans</italic>- and <italic>cis</italic>-conformers of MCH<sup>&#x2b;</sup>, their minimum energies at the optimized structure were compared. The results obtained from both 6&#x2013;31&#x2b;G&#x2a; and DGDZVP basis sets, showed that <italic>trans</italic>-MCH<sup>&#x2b;</sup> is more stable than <italic>cis</italic>-MCH<sup>&#x2b;</sup> by an energy of 7.22&#xa0;kcal&#xa0;mol<sup>&#x2212;1</sup> (0.31&#xa0;eV). Since both the basis sets gave similar results, further calculations were carried out using the 6&#x2013;31&#x2b;G&#x2a; basis set. The optimized structures of the <italic>trans</italic>-MCH<sup>&#x2b;</sup> and <italic>cis</italic>-MCH<sup>&#x2b;</sup> along with their atom numbering is shown in <xref ref-type="fig" rid="F1">Figures 1A,B</xref>. The absence of imaginary vibrational frequency for <italic>trans</italic>-MCH<sup>&#x2b;</sup> and <italic>cis</italic>-MCH<sup>&#x2b;</sup> confirmed that the optimized geometries correspond to local minima on the potential energy surface. The protonated form (MCH<sup>&#x2b;</sup>) may get deprotonated and remain as MC in solution and on the SCFs. Hence, geometry optimization was also carried out for <italic>trans</italic>-MC and <italic>cis</italic>-MC and their minimum energy computed. The computed energies of <italic>trans</italic>-MC and <italic>cis</italic>-MC at the B3LYP/6&#x2013;31&#x2b;G&#x2a; level of theory indicated that the <italic>trans</italic>-conformer is more stable in comparison to the <italic>cis</italic>-conformer by an energy of 6.37&#xa0;kcal&#xa0;mol<sup>&#x2212;1</sup> (0.27&#xa0;eV). The optimized molecular structures of <italic>trans</italic>-MC and <italic>cis</italic>-MC are shown in <xref ref-type="fig" rid="F1">Figures 1C,D</xref>, respectively. The vibrational frequencies for both <italic>trans</italic>-MC and <italic>cis</italic>-MC were computed at the optimized geometries. In order to identify the prevalence of <italic>trans</italic>-MCH<sup>&#x2b;</sup>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>, <italic>trans</italic>-MC, and <italic>cis</italic>-MC in solid and acetonitrile solution, the computed Raman spectrum of each conformer was compared with the observed Raman spectrum in solid and solution. The computed &#x201c;Raman intensity&#x201d; in each case refers to the &#x201c;Raman activity&#x201d; (<xref ref-type="bibr" rid="B58">Neugebauer et al., 2002</xref>) as implemented in Gaussian 09. For a one-to-one correspondence of the computed Raman activity with the experimental Raman spectrum, the calculated frequencies were scaled down by a factor of 0.95 and the Raman bands were broadened with a Lorentzian function of 10&#xa0;cm<sup>&#x2212;1</sup> full width at half maximum (FWHM). As discussed later, it is observed that the scaled vibrations show reasonable agreement with the experimental Raman spectrum of MCH<sup>&#x2b;</sup> in solid and acetonitrile solution. The absorption spectrum computed at the optimized geometries of <italic>trans</italic>-MCH<sup>&#x2b;</sup>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>, <italic>trans</italic>-MC and <italic>cis</italic>-MC conformers in acetonitrile using TDDFT method was compared with the experimental absorption spectrum of merocyanine in acetonitrile and the observations are discussed later.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Optimized molecular structures of <bold>(A)</bold> <italic>trans</italic>-MCH<sup>&#x2b;</sup>, <bold>(B)</bold> <italic>cis</italic>-MCH<sup>&#x2b;</sup>, <bold>(C)</bold> <italic>trans</italic>-MC and <bold>(D)</bold> <italic>cis</italic>-MC. The color codes used to identify the atoms are O (red), N (blue), C (grey) and H (white).</p>
</caption>
<graphic xlink:href="fchem-10-902585-g001.tif"/>
</fig>
<p>In order to identify the predominance of <italic>trans</italic>-MCH<sup>&#x2b;</sup>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>, <italic>trans</italic>-MC, and <italic>cis</italic>-MC on the surface of SCFs, the simplistic model with Ag<sub>4</sub> complexes for all forms; viz., <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>trans</italic>-MC-Ag<sub>4</sub>, and <italic>cis</italic>-MC-Ag<sub>4</sub> were optimized using B3LYP functional with 6&#x2013;31&#x2b;G&#x2a; basis set and LANL2DZ basis set for Ag. The absence of imaginary vibrations at the optimized geometries confirmed that <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>trans</italic>-MC-Ag<sub>4</sub>, and <italic>cis</italic>-MC-Ag<sub>4</sub> correspond to local minimum on the potential energy surface and not to saddle points. The computed Raman spectrum of these complexes at different excitation wavelengths was compared with the SERS and SERRS spectrum measured at 632.8 and 514.5&#xa0;nm. The absorption spectrum obtained from TDDFT calculation for <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>trans</italic>-MC-Ag<sub>4</sub> and <italic>cis</italic>-MC-Ag<sub>4</sub> complexes was compared with the absorption spectrum of merocynaine functionalized SCFs. The optimized parameters, viz., the bond distances, bond angles and the dihedral angles connecting the ethylenic C&#x3d;C bond are displayed in <xref ref-type="sec" rid="s10">Supplementary Table S1</xref>. The optimized bond distances clearly suggest that while <italic>trans</italic>-MCH<sup>&#x2b;</sup>, <italic>cis</italic>-MCH<sup>&#x2b;</sup> and their Ag<sub>4</sub> complexes remain in the benzenoid form, <italic>trans</italic>-MC, <italic>cis</italic>-MC and their Ag<sub>4</sub> complexes exist in the quinoidal form. The comparison of the computed Raman spectrum under preresonance excitation with the SERRS spectrum as discussed later clearly indicates the predominance of the <italic>trans</italic>- or <italic>cis</italic>-conformer of the protonated species of the analyte on the surface of SCFs.</p>
</sec>
<sec id="s4-2">
<title>UV-Visible Absorption Study</title>
<p>The UV-visible absorption spectrum of MCH<sup>&#x2b;</sup>/MC in acetonitrile solution (10&#xa0;&#x3bc;M) is shown in <xref ref-type="fig" rid="F2">Figure 2</xref>. The absorption band in the visible region (450&#x2013;750&#xa0;nm) is broad and structureless and is attributed to the intramolecular charge transfer (ICT) transition from the electron rich phenoxyl group to the electron deficient pyridinium moiety. It is observed from <xref ref-type="fig" rid="F2">Figure 2</xref> that the absorption maximum appears at 546&#xa0;nm with full width at half maxima (FWHM) of 85&#xa0;nm. In the ground electronic state (S<sub>0</sub>), MC remains protonated as MCH<sup>&#x2b;</sup> and exists either in the <italic>trans</italic>- or <italic>cis</italic>-configuration around the ethylenic C&#x3d;C bond. As observed from the computational results, the <italic>trans</italic>-MCH<sup>&#x2b;</sup> is energetically more stable than <italic>cis</italic>-MCH<sup>&#x2b;</sup>. The positive charge in MCH<sup>&#x2b;</sup> is centered on the pyridinium moiety. It is known that in various solvents, MC exists in a resonance balance between the benzenoid and quinonoid forms (<xref ref-type="bibr" rid="B79">Tsukada et al., 1989</xref>) with the dominance of former in polar solvents and latter in non polar solvents. Moreover, in polar solvents, the benzenoid form dominates in S<sub>0</sub> and the quinonoid form dominates in the excited state. The electronic excitation from the ground to the excited state, thus, involves change from the benzenoid to the quinonoid form, which is accompanied by significant changes in the ethylenic C&#x3d;C bond and the pyridinium and phenoxyl rings connecting the ethylenic C&#x3d;C bond. In order to confirm the prevalence of <italic>trans</italic>-MCH<sup>&#x2b;</sup>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>, <italic>trans</italic>-MC, and <italic>cis</italic>-MC in acetonitrile solution, the computed absorption spectrum (TDDFT) for these conformers in acetonitrile is included in <xref ref-type="fig" rid="F2">Figure 2</xref>. The computed absorption maximum for <italic>trans</italic>-MCH<sup>&#x2b;</sup> and <italic>cis</italic>-MCH<sup>&#x2b;</sup>, was observed at 427.2 and 474.7&#xa0;nm with the oscillator strength of 1.0257 and 0.3617, respectively. Similarly, the calculated absorption maximum and oscillator strengths for <italic>trans</italic>-MC (<italic>cis</italic>-MC) was found to be 458.4 (513.8)&#xa0;nm and 1.1726 (0.7285), respectively. In order to have a realistic resemblance of the experimental absorption spectrum with the computed spectrum for all conformers, the latter was scaled and red-shifted by 32&#xa0;nm and broadened with a Gaussian function of 3000&#xa0;cm<sup>&#x2212;1</sup> FWHM. The figure clearly shows the dominance of the cis-MC form in acetonitrile solution. The fluorescence spectrum of MC in acetonitrile recorded at 532&#xa0;nm excitation is also included in <xref ref-type="fig" rid="F2">Figure 2</xref>. It is observed from the figure that fluorescence maximum appears at 612&#xa0;nm with FWHM of 57&#xa0;nm.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Absorption (Concentration: 10&#xa0;&#x3bc;M) and fluorescence (Concentration: 0.1&#xa0;&#x3bc;M) spectrum of merocyanine in acetonitrile solution. The computed absorption spectrum of <italic>trans</italic>-MCH<sup>&#x2b;</sup>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>, <italic>trans</italic>-MC, and <italic>cis</italic>-MC in acetonitrile solvent is scaled and red-shifted by 32&#xa0;nm to have a realistic resemblance with the experimental spectrum.</p>
</caption>
<graphic xlink:href="fchem-10-902585-g002.tif"/>
</fig>
<p>The UV-Vis absorption spectrum of the bare nanostructured SCF and MC-SCFs with varying concentrations of MCH<sup>&#x2b;</sup>/MC was recorded. The absorption spectrum of the bare SCF is shown in <xref ref-type="fig" rid="F3">Figure 3A</xref>. The figure shows the appearance of a broad band with maximum at 419.6&#xa0;nm, attributed to the bulk-like surface plasmon resonance (BL-SPR) band (<xref ref-type="bibr" rid="B43">Le Ru and Etchegoin, 2012</xref>; <xref ref-type="bibr" rid="B26">Dutta Roy et al., 2018</xref>; <xref ref-type="bibr" rid="B21">Das et al., 2020</xref>; <xref ref-type="bibr" rid="B15">Chadha et al., 2021b</xref>; <xref ref-type="bibr" rid="B16">Chadha et al., 2022</xref>). It is known that the BL-SPR band of the metal NPs strongly depends on the shape, size and the extent of aggregation of the particles in addition to the dielectric constant of the medium as well as the surface adsorbed species (<xref ref-type="bibr" rid="B36">Jana et al., 2016</xref>). The absorption spectrum of the MC-SCFs with varying MC concentrations (10, 100, and 1000&#xa0;nM) is also included in <xref ref-type="fig" rid="F3">Figure 3A</xref>. It is observed from the figure that for MC-SCFs with 10&#xa0;nM&#xa0;MC, the absorbance at 419.6&#xa0;nm due to the BL-SPR band gradually reduces in intensity with slight blue shift to 416.2&#xa0;nm along with the appearance of a shoulder around 500&#x2013;750&#xa0;nm. Upon further increasing the MC concentration to 100 and 1,000&#xa0;nM; owing to the adsorption of the analyte on the surface of SCFs, the BL-SPR band red-shifts to 430 and 433&#xa0;nm, respectively. For the MC-SCFs with 100 and 1,000&#xa0;nM concentrations of MC, in addition to the red-shifting of the BL-SPR band, lower energy peaks were found to appear with maxima around 618 and 641&#xa0;nm. These lower energy peaks were attributed to the surface-like surface plasmon resonance (SL-SPR) band (<xref ref-type="bibr" rid="B43">Le Ru and Etchegoin, 2012</xref>; <xref ref-type="bibr" rid="B26">Dutta Roy et al., 2018</xref>; <xref ref-type="bibr" rid="B21">Das et al., 2020</xref>; <xref ref-type="bibr" rid="B15">Chadha et al., 2021b</xref>; <xref ref-type="bibr" rid="B16">Chadha et al., 2022</xref>) that arises due to the dipole-dipole interactions of the higher aggregated particles. From the figure, it is observed that increase in MC concentrations resulted in the lowering of energy of the SL-SPR band with increased magnitude and concomitant broadening. The red-shifting and broadening of the SL-SPR band was attributed to the presence of higher aggregated particles and is dependent on the analyte concentration as well as the electronic transitions associated with the analyte (<xref ref-type="bibr" rid="B18">Chowdhury et al., 2003</xref>; <xref ref-type="bibr" rid="B82">Willets and Van Duyne, 2007</xref>; <xref ref-type="bibr" rid="B62">Pal et al., 2010</xref>). For a better understanding of the experimental results, the absorption spectrum of <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>trans</italic>-MC-Ag<sub>4</sub>, and <italic>cis</italic>-MC-Ag<sub>4</sub> was computed with TDDFT method and the results are included in <xref ref-type="fig" rid="F3">Figure 3B</xref>. The absorption maximum for <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub> and <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4,</sub> was observed at 571.4 and 663.5&#xa0;nm along with the oscillator strengths of 0.0469 and 0.0361, respectively. Similarly, the computed absorption maximum for <italic>trans</italic>-MC-Ag<sub>4</sub> and <italic>cis</italic>-MC-Ag<sub>4</sub> was observed at 621.3 and 628.4&#xa0;nm with the oscillator strengths of 0.0479 and 0.0369, respectively. For comparison of the experimental and calculated absorption spectrum, the computed spectrum of all conformers was scaled and broadened with a Gaussian function of 1500&#xa0;cm<sup>&#x2212;1</sup> FWHM. The figure clearly shows that all the conformers, <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>trans</italic>-MC-Ag<sub>4</sub>, and <italic>cis</italic>-MC-Ag<sub>4</sub> have a broad absorption band with reasonable absorbance in the region from 550&#x2013;700&#xa0;nm.</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption>
<p>
<bold>(A)</bold> Surface plasmon resonance (SPR) bands of bare nanostructured SCF and MC-SCF with varying concentrations of MC. <bold>(B)</bold> The computed absorption spectrum of <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>trans</italic>-MC-Ag<sub>4</sub> and <italic>cis</italic>-MC-Ag<sub>4</sub> complex.</p>
</caption>
<graphic xlink:href="fchem-10-902585-g003.tif"/>
</fig>
</sec>
<sec id="s4-3">
<title>Atomic Force Microscopy Analysis</title>
<p>Atomic Force Microscopy (AFM) images of bare nanostructured SCF and MC-SCFs with MC concentrations of 10, 100, and 1000&#xa0;nM were recorded and are shown in <xref ref-type="fig" rid="F4">Figure 4</xref>. The AFM image as displayed in <xref ref-type="fig" rid="F4">Figure 4A</xref> shows the formation of polygonal shaped particles with an average size of 100&#xa0;nm. The AFM image of MC-SCF with MC concentration of 10&#xa0;nM clearly indicates the presence of aggregated particles with an average size of 250&#xa0;nm as shown in <xref ref-type="fig" rid="F4">Figure 4B</xref>. The AFM images of MC-SCFs with 100&#xa0;nM and 1000&#xa0;nM concentrations of MC are included in <xref ref-type="fig" rid="F4">Figures 4C,D</xref>. From the AFM images (<xref ref-type="fig" rid="F4">Figures 4C,D</xref>) the presence of aggregated particles with the particles approaching each other forming chain like structures is evident.</p>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption>
<p>AFM images of <bold>(A)</bold> bare nanostructured SCF, <bold>(B)</bold> MC-SCFs (MC concentration, 10&#xa0;nM), <bold>(C)</bold> MC-SCFs (MC concentration, 100&#xa0;nM), and <bold>(D)</bold> MC-SCFs (MC concentration, 1000&#xa0;nM).</p>
</caption>
<graphic xlink:href="fchem-10-902585-g004.tif"/>
</fig>
</sec>
<sec id="s4-4">
<title>Raman Spectra of Merocyanine and its Vibrational Assignments</title>
<p>The Raman spectrum of solid merocyanine for the region 350&#x2013;1650&#xa0;cm<sup>&#x2212;1</sup> is shown in <xref ref-type="fig" rid="F5">Figure 5A</xref>. The observed Raman bands are assigned to the stretching and bending vibrations of the pyridinium (py) ring, phenoxyl (ph) ring and to the ethylenic (C&#x3d;C)<sub>eth</sub> group joining the two rings. The assignments are based on comparison of the observed vibrations with the computed (B3LYP/6&#x2013;31&#x2b;G&#x2a; and B3LYP/DGDZVP) frequencies for <italic>trans</italic>-MCH<sup>&#x2b;</sup> and <italic>cis</italic>-MCH<sup>&#x2b;</sup>. All the observed Raman vibrations of solid MC along with the computed vibrations are shown in <xref ref-type="table" rid="T1">Table 1</xref>. Both, <italic>trans</italic>-MCH<sup>&#x2b;</sup> and <italic>cis</italic>-MCH<sup>&#x2b;</sup> comprise of 36 atoms and thus, contain 102 fundamental modes of vibrations. The conformers belong to the C<sub>1</sub> point group and all the fundamental vibrations are expected to appear both in Raman and infrared spectra. It is observed from <xref ref-type="fig" rid="F5">Figure 5A</xref> and <xref ref-type="table" rid="T1">Table 1</xref> that the Raman spectrum of solid MC exhibits two strong marker bands at 1534 and 1132&#xa0;cm<sup>&#x2212;1</sup> that are assigned to ethylenic (C&#x3d;C)<sub>eth</sub> stretching (str) in combination with phenoxyl (ph) ring (CC)<sub>ph</sub> str and in-plane (ip) (HCC)<sub>eth</sub> bend and C<sub>26</sub>N<sub>25</sub> str combined with C<sub>2</sub>C<sub>4</sub> and C<sub>1</sub>C<sub>3</sub> str, respectively. Medium intensity Raman bands are observed at 1562, 1292, and 1166&#xa0;cm<sup>&#x2212;1</sup>, which are assigned to (C&#x3d;C)<sub>eth</sub> str combined with (CC)<sub>ph</sub> str and ip (HCC)<sub>eth</sub> bend, ip (HCC)<sub>eth</sub> bend, ip (HCC)<sub>ph</sub> bend and pyridinium (py) ip (HCC)<sub>py</sub> bend and ip (CCC)<sub>py</sub> bend and ip (HCC)<sub>py</sub> bend, respectively. Weak bands are observed at 1450, 496, and 435&#xa0;cm<sup>&#x2212;1</sup>. Of these vibrations, the mode observed at 1450&#xa0;cm<sup>&#x2212;1</sup> corresponds to the asymmetric (asym) (CC)<sub>ph</sub> str combined ip (HCC)<sub>eth</sub> and ip (HCC)<sub>ph</sub> bend. The 496 and 435&#xa0;cm<sup>&#x2212;1</sup> bands are assigned to ring rotation corresponding to ph and py groups and out-of-plane (oop) (COH)<sub>ph</sub> ring. A comparison of the solid Raman spectrum with the theoretically computed (B3LYP/6&#x2013;31&#x2b;G&#x2a; and B3LYP/DGDZVP) Raman spectrum of the <italic>trans-</italic> and <italic>cis</italic>-conformers of MCH<sup>&#x2b;</sup> is displayed in <xref ref-type="sec" rid="s10">Supplementary Figure S1</xref>. The figure clearly shows the resemblance of the computed Raman spectrum of <italic>trans</italic>-and <italic>cis</italic>-forms of MCH<sup>&#x2b;</sup> with the Raman spectrum of solid merocyanine. This indicates that in solid, merocyanine mainly exists as <italic>trans</italic>-MCH<sup>&#x2b;</sup> and <italic>cis</italic>-MCH<sup>&#x2b;</sup>. It is observed from <xref ref-type="sec" rid="s10">Supplementary Figure S1</xref> that the computed Raman spectrum of <italic>trans</italic>-MCH<sup>&#x2b;</sup> and <italic>cis</italic>-MCH<sup>&#x2b;</sup> is almost identical for both 6&#x2013;31&#x2b;G&#x2a; and DGDZVP basis sets. Thus, for the sake of brevity, in <xref ref-type="fig" rid="F5">Figure 5A</xref>, the solid Raman spectrum of merocyanine is compared with the B3LYP/6&#x2013;31&#x2b;G&#x2a; computed Raman spectrum of the <italic>trans</italic>- and <italic>cis</italic>-conformers of MCH<sup>&#x2b;</sup>. The computed Raman spectrum of the <italic>trans</italic>- and <italic>cis</italic>-conformers of the de-protonated form (MC) is also included in <xref ref-type="fig" rid="F5">Figure 5A</xref> for comparison with the solid Raman spectrum of merocyanine. It is clearly evident from the figure that in solid state, both the <italic>trans</italic>- and <italic>cis</italic>-conformers of merocyanine predominantly exists in the protonated (MCH<sup>&#x2b;</sup>) form.</p>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption>
<p>
<bold>(A)</bold> Raman spectrum of merocyanine (I) solid, recorded at 785&#xa0;nm excitation. B3LYP/6&#x2013;31&#x2b;G&#x2a; computed Raman spectrum of (II) <italic>trans</italic>-MCH<sup>&#x2b;</sup>, (III) <italic>cis</italic>-MCH<sup>&#x2b;</sup>, (IV) <italic>trans</italic>-MC and (V) <italic>cis</italic>-MC. <bold>(B)</bold> Raman spectrum of merocyanine (I) in acetonitrile, recorded at 785&#xa0;nm excitation. B3LYP/6&#x2013;31&#x2b;G&#x2a; computed Raman spectrum (in acetonitrile) of (II) <italic>trans</italic>-MCH<sup>&#x2b;</sup>, (III) <italic>cis</italic>-MCH<sup>&#x2b;</sup>, (IV) <italic>trans</italic>-MC and (V) <italic>cis</italic>-MC.</p>
</caption>
<graphic xlink:href="fchem-10-902585-g005.tif"/>
</fig>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Assignments of Raman spectrum in solid, acetonitrile and SERRS spectrum of merocyanine along with the B3LYP/6&#x2013;31&#x2b;G&#x2a; computed vibrations (in cm<sup>&#x2212;1</sup>) of MCH<sup>&#x2b;</sup>.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th colspan="2" align="left">Raman</th>
<th rowspan="2" align="left">SERRS</th>
<th colspan="2" align="center">Computed vibrations B3LYP/6&#x2013;31&#x2b;G&#x2a;</th>
<th rowspan="2" align="center">Assignments</th>
</tr>
<tr>
<th align="left">Solid</th>
<th align="center">Solution</th>
<th align="left">
<italic>trans</italic>-MCH<sup>&#x2b;</sup>
</th>
<th align="left">
<italic>cis</italic>-MCH<sup>&#x2b;</sup>
</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left"/>
<td align="left"/>
<td align="char" char=".">1612w</td>
<td align="char" char=".">1613</td>
<td align="char" char=".">1606</td>
<td align="left">&#x3bd;(CC)<sub>py</sub>,&#x3bd;(CC)<sub>eth</sub>, &#x3b4;(HCC)<sub>py</sub>
</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="char" char=".">1580w</td>
<td align="char" char=".">1587</td>
<td align="char" char=".">1580</td>
<td align="left">&#x3bd;(CC)<sub>ph</sub>,&#x3bd;(CC)<sub>eth</sub>, &#x3b4;(HCC)<sub>ph</sub>
</td>
</tr>
<tr>
<td align="left">1562&#xa0;m</td>
<td align="char" char=".">1565&#xa0;m</td>
<td align="left"/>
<td align="char" char=".">1547</td>
<td align="char" char=".">1545</td>
<td align="left">&#x3bd;(CC)<sub>eth</sub>,&#x3bd;(CC)<sub>ph</sub>, &#x3b4;(HCC)<sub>eth</sub>
</td>
</tr>
<tr>
<td align="left">1534s</td>
<td align="char" char=".">1538s</td>
<td align="char" char=".">1540s</td>
<td align="char" char=".">1529</td>
<td align="char" char=".">1526</td>
<td align="left"/>
</tr>
<tr>
<td align="left"/>
<td align="char" char=".">1497w</td>
<td align="left"/>
<td align="char" char=".">1493</td>
<td align="char" char=".">1496</td>
<td align="left">&#x3bd;(CC)<sub>py</sub>,&#x3bd;(CN)<sub>py</sub>, &#x3b4;(HCC)<sub>py</sub>
</td>
</tr>
<tr>
<td align="left">1450w</td>
<td align="char" char=".">1450w</td>
<td align="char" char=".">1440w</td>
<td align="char" char=".">1416</td>
<td align="char" char=".">1412</td>
<td align="left">&#x3bd;(CC)<sub>ph</sub> asym,&#x3b4;(HCC)<sub>eth</sub>, &#x3b4;(HCC)<sub>ph</sub>
</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="char" char=".">1397w</td>
<td align="char" char=".">1348</td>
<td align="char" char=".">1342</td>
<td align="left">&#x3bd;(CC)<sub>py</sub> asym,&#x3b4;(HCC)<sub>py</sub>
</td>
</tr>
<tr>
<td align="left">1292&#xa0;m</td>
<td align="char" char=".">1290w</td>
<td align="char" char=".">1274&#xa0;m</td>
<td align="char" char=".">1298</td>
<td align="char" char=".">1305</td>
<td align="left">&#x3b4;(HCC)<sub>eth</sub>, &#x3b4;(HCC)<sub>ph</sub>, &#x3b4;(HCC)<sub>py</sub>
</td>
</tr>
<tr>
<td align="left">1166&#xa0;m</td>
<td align="char" char=".">1169&#xa0;m</td>
<td align="char" char=".">1174&#xa0;m</td>
<td align="char" char=".">1176</td>
<td align="char" char=".">1181</td>
<td align="left">&#x3b4;(CCC)<sub>py</sub>, &#x3b4;(HCC)<sub>py</sub>
</td>
</tr>
<tr>
<td align="left">1132s</td>
<td align="char" char=".">1133s 1109&#xa0;m</td>
<td align="char" char=".">1126s</td>
<td align="char" char=".">1127</td>
<td align="char" char=".">1111</td>
<td align="left">&#x3bd; (C<sub>26</sub>N<sub>25</sub>), &#x3bd; (C<sub>2</sub>C<sub>4</sub>), &#x3bd; (C<sub>1</sub>C<sub>3</sub>), &#x3b4;(HCC)<sub>py</sub>
</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="char" char=".">937w</td>
<td align="char" char=".">952</td>
<td align="char" char=".">950</td>
<td align="left">&#x3c4;(HCCH)<sub>eth</sub>
</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="char" char=".">854&#xa0;m</td>
<td align="char" char=".">821</td>
<td align="char" char=".">805</td>
<td align="left">C-O str, (ring breathing)<sub>ph</sub>, (ring breathing)<sub>py</sub>
</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="char" char=".">705w</td>
<td align="char" char=".">696</td>
<td align="char" char=".">739</td>
<td align="left">(ring distorsion)<sub>py</sub>, CH<sub>2</sub> rock</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="char" char=".">578w</td>
<td align="char" char=".">564</td>
<td align="char" char=".">610</td>
<td align="left">&#x3b4;(CCC)<sub>ph</sub>, &#x3b4;(CCC)<sub>py</sub>, CH<sub>2</sub> rock</td>
</tr>
<tr>
<td align="left"/>
<td align="left"/>
<td align="char" char=".">562w</td>
<td align="left"/>
<td align="left"/>
<td align="left"/>
</tr>
<tr>
<td align="left">496w</td>
<td align="left"/>
<td align="char" char=".">466w</td>
<td align="char" char=".">468</td>
<td align="char" char=".">470</td>
<td align="left">(ring rotation)<sub>ph</sub>, (ring rotation)<sub>py</sub>
</td>
</tr>
<tr>
<td align="left">435w</td>
<td align="left"/>
<td align="left"/>
<td align="char" char=".">422</td>
<td align="char" char=".">416</td>
<td align="left">&#x3b3;(COH)<sub>ph</sub>
</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>Abbreviations useds: strong, m, medium; w, weak; &#x3bd;, stretching, &#x3b4;: in-plane bending, &#x3c4;: torsion, &#x3b3;: out-of-plane bending, py: pyridinium ring, eth: ethylenic (C&#x3d;C)<sub>eth</sub> group, ph: phenoxyl ring.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<p>Since, the resonance Raman (RR) spectrum of merocyanine (10&#xa0;mM) in acetonitrile solution recorded with 514.5&#xa0;nm excitation was completely masked by the huge fluorescence background, the Raman spectrum was recorded at 785&#xa0;nm excitation and the spectrum is shown in <xref ref-type="sec" rid="s10">Supplementary Figure S2A</xref>. The dominance of the acetonitrile peaks is clearly observed from the figure. In order to get meaningful data in solution, the Raman spectrum of acetonitrile (<xref ref-type="sec" rid="s10">Supplementary Figure S2B</xref>) was subtracted from the spectrum of merocyanine in acetonitrile. The subtracted spectrum of merocyanine in acetonitrile for the region, 350&#x2013;1650&#xa0;cm<sup>&#x2212;1</sup> is also included in <xref ref-type="fig" rid="F5">Figure 5B</xref> for comparison with the solid Raman spectrum. The observed Raman vibrations of merocyanine in solution are also displayed in <xref ref-type="table" rid="T1">Table 1</xref>. From <xref ref-type="fig" rid="F5">Figure 5B</xref> and <xref ref-type="table" rid="T1">Table 1</xref>, it is seen that intense marker bands are observed at 1538 and 1133&#xa0;cm<sup>&#x2212;1</sup> that are assigned to (C&#x3d;C)<sub>eth</sub> str in combination with (CC)<sub>ph</sub> str and ip (HCC)<sub>eth</sub> bend and C<sub>26</sub>N<sub>25</sub> str combined with C<sub>2</sub>C<sub>4</sub> and C<sub>1</sub>C<sub>3</sub> str, respectively. Medium intensity Raman bands are observed at 1565, 1169, and 1109&#xa0;cm<sup>&#x2212;1</sup>, which are assigned to (C&#x3d;C)<sub>eth</sub> str in combination with (CC)<sub>ph</sub> str and ip (HCC)<sub>eth</sub> bend, ip (CCC)<sub>py</sub> bend along with ip (HCC)<sub>py</sub> bend and C<sub>26</sub>N<sub>25</sub> str combined with C<sub>2</sub>C<sub>4</sub> and C<sub>1</sub>C<sub>3</sub> str, respectively. Weak Raman bands are observed at 1497, 1450, and 1290&#xa0;cm<sup>&#x2212;1</sup>. Of these vibrations, the mode observed at 1497&#xa0;cm<sup>&#x2212;1</sup> is assigned to (CC)<sub>py</sub> str, (CN)<sub>py</sub> str and ip (HCC)<sub>py</sub> bend. The modes at 1450 and 1290&#xa0;cm<sup>&#x2212;1</sup> are assigned to (CC)<sub>ph</sub> asym str combined with ip (HCC)<sub>eth</sub> bend and ip (HCC)<sub>ph</sub> bend and ip (HCC)<sub>eth</sub> bend, ip (HCC)<sub>ph</sub> bend and ip (HCC)<sub>py</sub> bend, respectively. Assessment of the solution Raman spectrum (<xref ref-type="fig" rid="F5">Figure 5B</xref>; <xref ref-type="table" rid="T1">Table 1</xref>) and comparison with the solid and computed Raman spectrum (in acetonitrile) of the <italic>trans</italic>-MCH<sup>&#x2b;</sup> and <italic>cis</italic>-MCH<sup>&#x2b;</sup> clearly suggests that majority of the merocyanine peaks in solution are similar to the solid spectrum, which confirms the presence of both the <italic>trans</italic>-MCH<sup>&#x2b;</sup> and <italic>cis</italic>-MCH<sup>&#x2b;</sup> in solution. In order to verify the existence of the deprotonated form (MC) in solution, the Raman spectrum of merocyanine in acetonitrile solution (<xref ref-type="fig" rid="F5">Figure 5B</xref>) is compared with the computed Raman spectrum of the <italic>trans</italic>-MC (<xref ref-type="fig" rid="F5">Figure 5BIV</xref>) and <italic>cis</italic>-MC (<xref ref-type="fig" rid="F5">Figure 5BV</xref>). The figure clearly shows the abundance of the <italic>trans</italic>- and <italic>cis</italic>-conformers of the protonated form, MCH<sup>&#x2b;</sup> in solid and acetonitrile solution and negligible contribution from the deprotonated forms. Overall, a good agreement between the computed Raman spectrum of <italic>trans</italic>-MCH<sup>&#x2b;</sup> and <italic>cis</italic>-MCH<sup>&#x2b;</sup> with the experimental Raman spectrum in solid and acetonitrile solution is observed.</p>
</sec>
<sec id="s4-5">
<title>Surface-Enhanced Resonance Raman Scattering Spectrum of Merocyanine</title>
<p>The concentration-dependent Surface-Enhanced Resonance Raman Scattering (SERRS) spectrum of merocyanine adsorbed on nanostructured silver-coated films (SCFs) are shown in <xref ref-type="fig" rid="F6">Figure 6A</xref>. The concentration of merocyanine was varied from 0.1 to 1000&#xa0;nM. The SERRS measurements were performed on the dried surface of the silver films. From <xref ref-type="fig" rid="F6">Figure 6A</xref>, it is evident that modest enhancement of Raman bands are observed at 0.1&#xa0;nM concentration of merocyanine. Appreciable enhancement in the intensities of the Raman bands are observed at 1, 10, 100, and 1,000&#xa0;nM concentrations of merocyanine. Maximum enhancement is observed at the merocyanine concentration of 1,000&#xa0;nM, probably due to monolayer coverage of the analyte on the nanostructured SCFs. At lower concentrations of merocyanine, the SERRS intensity was less, possibly due to the sub-monolayer coverage. Intense marker bands in SERRS spectrum are observed at 1540 and 1126&#xa0;cm<sup>&#x2212;1</sup>. Of these vibrations, 1540&#xa0;cm<sup>&#x2212;1</sup> is assigned to the (C&#x3d;C)<sub>eth</sub> str combined with (CC)<sub>ph</sub> str and ip (HCC)<sub>eth</sub> bend and 1126&#xa0;cm<sup>&#x2212;1</sup> is attributed to the C<sub>26</sub>N<sub>25</sub> str combined with C<sub>2</sub>C<sub>4</sub> and C<sub>1</sub>C<sub>3</sub> str. Medium and weak SERRS bands are observed at 1612 [(CC)<sub>py</sub> str, (CC)<sub>eth</sub> str and ip (HCC)<sub>py</sub> bend], 1580 [(CC)<sub>ph</sub> str, (CC)<sub>eth</sub> str and ip (HCC)<sub>ph</sub> bend], 1440 [(CC)<sub>ph</sub> str, asym (HCC)<sub>eth</sub> bend and ip (HCC)<sub>ph</sub> bend], 1397 [asym (CC)<sub>py</sub> str, and ip (HCC)<sub>py</sub> bend], 1274 [ip (HCC)<sub>eth</sub> bend, ip (HCC)<sub>ph</sub> bend and ip (HCC)<sub>py</sub> bend], 1174 [ip (CCC)<sub>py</sub> bend and ip (HCC)<sub>py</sub> bend), 937 [(HCCH)<sub>eth</sub> torsion], 854 [CO str, (ring breathing)<sub>ph</sub> and (ring breathing)<sub>py</sub>], 705 [(ring distortion)<sub>py</sub> and CH<sub>2</sub> rock], 578 [ip (CCC)<sub>ph</sub> bend, ip (CCC)<sub>py</sub> bend and CH<sub>2</sub> rock], 562&#xa0;cm<sup>&#x2212;1</sup> [ip (CCC)<sub>ph</sub> bend, ip (CCC)<sub>py</sub> bend and CH<sub>2</sub> rock] and 466&#xa0;cm<sup>&#x2212;1</sup> [(ring rotation)<sub>ph</sub> and (ring rotation)<sub>py</sub>)], respectively. All the vibrations observed in SERRS spectrum along with their assignments are tabulated in <xref ref-type="table" rid="T1">Table 1</xref>. From <xref ref-type="fig" rid="F6">Figure 6A</xref> it is clearly observed that the changes in adsorbate concentration, leads to the overall intensity variation of the Raman bands with absolutely no change in either the band positions or the band widths. This indicates that the adsorbate undergoes no change in the binding characteristics and orientation on the nanostructured SCFs with change in concentration. The relative SERRS intensity response (I/I<sub>0</sub>), normalized for laser power and integration time for the two strong marker peaks observed at 1,126 and 1,540&#xa0;cm<sup>&#x2212;1</sup> as a logarithmic function of the MC concentration is plotted in <xref ref-type="fig" rid="F6">Figure 6B</xref>. The SERRS intensities of 1,126 and 1,540&#xa0;cm<sup>&#x2212;1</sup> bands at MC concentration of 0.1&#xa0;nM is represented as I<sub>0</sub> and the intensity for all other concentrations is referred as I. From <xref ref-type="fig" rid="F6">Figure 6B</xref>, it is observed that the relative intensity response (I/I<sub>0</sub>) for both the Raman bands at 1,126 and 1,540&#xa0;cm<sup>&#x2212;1</sup> display linear increase in the logarithmic concentration range of 0.1&#x2013;1,000&#xa0;nM. The analytical enhancement factor (AEF) (<xref ref-type="bibr" rid="B44">Le Ru et al., 2007</xref>; <xref ref-type="bibr" rid="B63">Pavel et al., 2012</xref>; <xref ref-type="bibr" rid="B3">Ben-Jaber et al., 2017</xref>) for the 1,126 and 1,540&#xa0;cm<sup>&#x2212;1</sup> bands were calculated from <xref ref-type="disp-formula" rid="e1">Eq. 1</xref>.<disp-formula id="e1">
<mml:math id="m1">
<mml:mrow>
<mml:mo>&#xa0;</mml:mo>
<mml:mi mathvariant="normal">AEF</mml:mi>
<mml:mo>&#x3d;</mml:mo>
<mml:mfrac>
<mml:mrow>
<mml:mrow>
<mml:mrow>
<mml:mi>I</mml:mi>
<mml:mrow>
<mml:mo>(</mml:mo>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mi>E</mml:mi>
<mml:mi>R</mml:mi>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mo>)</mml:mo>
</mml:mrow>
</mml:mrow>
<mml:mo>/</mml:mo>
<mml:mrow>
<mml:mi>C</mml:mi>
<mml:mrow>
<mml:mo>(</mml:mo>
<mml:mrow>
<mml:mi>S</mml:mi>
<mml:mi>E</mml:mi>
<mml:mi>R</mml:mi>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mo>)</mml:mo>
</mml:mrow>
</mml:mrow>
</mml:mrow>
</mml:mrow>
<mml:mrow>
<mml:mrow>
<mml:mrow>
<mml:mi>I</mml:mi>
<mml:mrow>
<mml:mo>(</mml:mo>
<mml:mrow>
<mml:mi>R</mml:mi>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mo>)</mml:mo>
</mml:mrow>
</mml:mrow>
<mml:mo>/</mml:mo>
<mml:mrow>
<mml:mi>C</mml:mi>
<mml:mrow>
<mml:mo>(</mml:mo>
<mml:mrow>
<mml:mi>R</mml:mi>
<mml:mi>S</mml:mi>
</mml:mrow>
<mml:mo>)</mml:mo>
</mml:mrow>
</mml:mrow>
</mml:mrow>
</mml:mrow>
</mml:mfrac>
</mml:mrow>
</mml:math>
<label>(1)</label>
</disp-formula>where I<sub>(SERS)</sub> and I<sub>(RS)</sub> represent the intensity of the average SERS and conventional Raman signal, respectively, and C<sub>(SERS)</sub> and C<sub>(RS)</sub> refer to the analyte concentrations in the SERS and Raman measurements, respectively. The plot of AEF as a logarithmic function of MC concentration is shown in the inset of <xref ref-type="fig" rid="F6">Figure 6B</xref>. The AEF for the 1,126 and 1,540&#xa0;cm<sup>&#x2212;1</sup> band are tabulated in <xref ref-type="sec" rid="s10">Supplementary Table S2</xref>. It is observed from <xref ref-type="fig" rid="F6">Figure 6B</xref> and <xref ref-type="sec" rid="s10">Supplementary Table S2</xref>, that the AEF for 1126&#xa0;cm<sup>&#x2212;1</sup> band increases from 2.7 &#xd7; 10<sup>7</sup> to 7.9 &#xd7; 10<sup>10</sup> as the concentration is lowered from 1000 to 0.1&#xa0;nM. Similarly, for the 1540&#xa0;cm<sup>&#x2212;1</sup> peak, the AEF varies from 1.8 &#xd7; 10<sup>7</sup> to 5.6 &#xd7; 10<sup>10</sup> with change in MC concentration from 1000 to 0.1&#xa0;nM.</p>
<fig id="F6" position="float">
<label>FIGURE 6</label>
<caption>
<p>
<bold>(A)</bold> Concentration-dependent SERRS spectrum of merocyanine recorded at 514.5&#xa0;nm excitation. <bold>(B)</bold> Relative SERRS intensity response (I/I<sub>0</sub>) of the 1,126 and 1,540&#xa0;cm<sup>&#x2212;1</sup> bands of merocyanine as logarithmic function of the MC concentration. The inset in <xref ref-type="fig" rid="F6">Figure 6B</xref> shows the analytical enhancement factor (AEF) corresponding to the 1,126 and 1,540&#xa0;cm<sup>&#x2212;1</sup> Raman bands as a function of merocyanine concentration.</p>
</caption>
<graphic xlink:href="fchem-10-902585-g006.tif"/>
</fig>
<p>The SERS spectrum was also recorded at different excitation wavelengths, viz., 514.5, 632.8, and 785&#xa0;nm and is shown in <xref ref-type="fig" rid="F7">Figure 7</xref>. The SERS spectrum recorded at 785&#xa0;nm clearly shows an intense band at 1126&#xa0;cm<sup>&#x2212;1</sup> and moderately intense bands at 1174 and 854&#xa0;cm<sup>&#x2212;1</sup>. Weak bands are observed at 1612, 1540, 1274, and 937&#xa0;cm<sup>&#x2212;1</sup>. Under pre-resonance conditions, as the excitation wavelength is shifted to 632.8&#xa0;nm, the SERS bands observed at 562, 578, 854, 1126, 1174, 1274, 1540, and 1612 increases in intensity. Under resonance condition, with the excitation wavelength shifting to 514.5&#xa0;nm, where the excitation remains in resonance with the intramolecular charge transfer (ICT) transition of merocyanine dye, the SERRS spectrum shows huge enhancement mainly for the 1126 (C<sub>26</sub>N<sub>25</sub> str combined with C<sub>2</sub>C<sub>4</sub> and C<sub>1</sub>C<sub>3</sub> str) and 1540&#xa0;cm<sup>&#x2212;1</sup> [(C&#x3d;C)<sub>eth</sub> str combined with (CC)<sub>ph</sub> str and ip (HCC)<sub>eth</sub> bend] bands. Thus, from the excitation-dependent SERS spectrum, it is clear that the 1540&#xa0;cm<sup>&#x2212;1</sup> band with weak and moderate intensity at 785 and 632.8&#xa0;nm excitation displayed huge enhancement under resonance condition (514.5&#xa0;nm). The 1126&#xa0;cm<sup>&#x2212;1</sup> band that is intense with 785 and 632.8&#xa0;nm excitation also exhibited huge enhancement under resonance excitation at 514.5&#xa0;nm. Thus, from the excitation-dependent SERS, it is apparent that in addition to the chemical enhancement due to resonance effect, huge enhancement in intensity for the 1126 and 1540&#xa0;cm<sup>&#x2212;1</sup> bands is observed from the electromagnetic effect; as a result of which not much variation was seen in the spectral shapes of these bands.</p>
<fig id="F7" position="float">
<label>FIGURE 7</label>
<caption>
<p>SERS spectrum of merocyanine dye (1&#xa0;&#x3bc;M) recorded with 785, 632.8, and 785&#xa0;nm excitation.</p>
</caption>
<graphic xlink:href="fchem-10-902585-g007.tif"/>
</fig>
<p>In order to have a thorough understanding of the binding/adsorption characteristics of the merocyanine dye adsorbed on the nanostructured SCFs, the SERS spectrum recorded at 785&#xa0;nm excitation (<xref ref-type="fig" rid="F8">Figure 8A</xref>) was compared with the computed Raman spectrum of the Ag<sub>4</sub> complexes of <italic>trans</italic>-MCH<sup>&#x2b;</sup> (<xref ref-type="fig" rid="F8">Figure 8B</xref>), <italic>cis</italic>-MCH<sup>&#x2b;</sup> (<xref ref-type="fig" rid="F8">Figure 8C</xref>), <italic>trans</italic>-MC (<xref ref-type="fig" rid="F8">Figure 8D</xref>) and <italic>cis</italic>-MC (<xref ref-type="fig" rid="F8">Figure 8E</xref>). The optimized molecular structures of the <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>trans</italic>-MC-</p>
<fig id="F8" position="float">
<label>FIGURE 8</label>
<caption>
<p>
<bold>(A)</bold> SERS spectrum of merocyanine dye (1&#xa0;&#x3bc;M) recorded at 785&#xa0;nm excitation, B3LYP/6&#x2013;31&#x2b;G&#x2a; computed Raman spectrum of <bold>(B)</bold> <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <bold>(C)</bold> <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <bold>(D)</bold> <italic>trans</italic>-MC-Ag<sub>4</sub> and <bold>(E)</bold> <italic>cis</italic>-MC-Ag<sub>4</sub>. Optimized molecular structures of <bold>(F)</bold> <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <bold>(G)</bold> <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <bold>(H)</bold> <italic>trans</italic>-MC-Ag<sub>4</sub> and <bold>(I)</bold> <italic>cis</italic>-MC-Ag<sub>4</sub>.</p>
</caption>
<graphic xlink:href="fchem-10-902585-g008.tif"/>
</fig>
<p>Ag<sub>4</sub> and <italic>cis</italic>-MC-Ag<sub>4</sub> are also included in the <xref ref-type="fig" rid="F8">Figure 8 (F&#x2013;I)</xref> in order to appreciate the probable binding and orientation of the merocyanine dye on the nanostructured surface of SCFs. On the nanostructured surface, merocyanine may exist in the protonated form (MCH<sup>&#x2b;</sup>) or it may undergo deprotonation and remain as MC. The prevalence of the <italic>trans-/cis-</italic>conformers of the protonated (MCH<sup>&#x2b;</sup>) or deprotonated (MC) forms on the nanostructured SCFs surface was confirmed from the observed similarities of the SERS and the computed Raman spectrum of the respective adsorbate (trans-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, cis MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, trans MC-Ag<sub>4</sub> and cis MC-Ag<sub>4</sub>). It is apparent from the figure that the computed vibrational features of <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub> have maximum resemblance with the experimental SERS spectrum albeit differences in the computed Raman intensities. This indicates the predominance of <italic>cis</italic>-MCH<sup>&#x2b;</sup> on the surface of nanostructured SCFs although minor contribution from <italic>trans</italic>-MCH<sup>&#x2b;</sup> cannot be completely ignored. The figure clearly displays that the computed Raman spectrum of <italic>trans</italic>-MC and <italic>cis</italic>-MC does not have much correlation with the SERS spectrum, which suggests negligible contribution from the deprotonated forms of merocyanine on the nanostructured SCFs.</p>
<p>In order to identify the sources of intensity enhancement in SERS (<xref ref-type="bibr" rid="B37">Jensen et al., 2008</xref>), viz., &#x201c;long range&#x201d; (electromagnetic) or &#x201c;short range&#x201d; (chemical, resonance with charge-transfer states), the Raman spectrum of <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <italic>trans</italic>-MC-Ag<sub>4</sub> and <italic>cis</italic>-MC-Ag<sub>4</sub> was computed under preresonance conditions with respect to molecular excitation energies. The computed Raman spectrum for all the four Ag<sub>4</sub> complexes with 632.8 and 514.5&#xa0;nm excitation was compared with the SERS (<xref ref-type="fig" rid="F9">Figure 9A</xref>) and SERRS (<xref ref-type="fig" rid="F9">Figure 9B</xref>) spectrum measured at 632.8 and 514.5&#xa0;nm, respectively. From <xref ref-type="fig" rid="F9">Figure 9A</xref>, it is evident that the computed Raman spectrum of <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub> under preresonace excitation of 632.8&#xa0;nm shows reasonable agreement with the experimental SERS spectrum recorded at 632.8&#xa0;nm, despite differences in intensities. The computed Raman spectrum in pre-resonance condition with excitation at 514.5&#xa0;nm (<xref ref-type="fig" rid="F9">Figure 9B</xref>) when compared with the SERRS spectrum recorded at 514.5&#xa0;nm clearly confirm the dominance of the <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub> conformer on the nanostructured SCFs. Although, there are apparent differences in the computed intensities, the Raman activity of <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub> conformer shows good agreement with the SERRS spectrum. In all the cases the computed Raman intensities (activities) differ from the actual measured intensities possibly due to our simplistic &#x201c;static&#x201d; or Placzek&#x2019;s approach (<xref ref-type="bibr" rid="B80">Walter and Moseler, 2020</xref>) for computing the Raman activity. Moreover, it is apparent from <xref ref-type="fig" rid="F9">Figure 9</xref> that the intensity enhancement in the SERS and SERRS spectrum has dominant contribution from the electromagnetic effect, which results in amplification of the Raman intensities without affecting the spectral shape of the Raman bands.</p>
<fig id="F9" position="float">
<label>FIGURE 9</label>
<caption>
<p>
<bold>(A)</bold> SERS spectrum of merocyanine dye (1&#xa0;&#x3bc;M) recorded at 632.8&#xa0;nm excitation and B3LYP/6&#x2013;31&#x2b;G&#x2a; computed Raman spectrum (632.8&#xa0;nm) of <bold>(B)</bold> <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <bold>(C)</bold> <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <bold>(D)</bold> <italic>trans</italic>-MC-Ag<sub>4</sub> and <bold>(E)</bold> <italic>cis</italic>-MC-Ag<sub>4</sub>. <bold>(F)</bold> SERRS spectrum of merocyanine dye (1&#xa0;&#x3bc;M) recorded at 514.5&#xa0;nm excitation and B3LYP/6&#x2013;31&#x2b;G&#x2a; computed Raman spectrum (514.5&#xa0;nm) of <bold>(G)</bold> <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <bold>(H)</bold> <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>, <bold>(I)</bold> <italic>trans</italic>-MC-Ag<sub>4</sub> and <bold>(J)</bold> <italic>cis</italic>-MC-Ag<sub>4</sub>.</p>
</caption>
<graphic xlink:href="fchem-10-902585-g009.tif"/>
</fig>
<p>The observed results can be summarized as follows: 1) the prominent marker bands of merocyanine at 1538 (ethylenic C&#x3d;C stretch) and 1133&#xa0;cm<sup>&#x2212;1</sup> (pyridinium C-N stretch) in acetonitrile solution is shifted to 1540 and 1126&#xa0;cm<sup>&#x2212;1</sup> in the SERRS spectrum. The appreciable shift of 7&#xa0;cm<sup>&#x2212;1</sup> for the pyridinium C-N stretching vibration is also evident from the observed change in the bond distance of C<sub>26</sub>N<sub>25</sub> from 1.489&#xa0;&#xc5; (<italic>trans</italic>-MCH<sup>&#x2b;</sup>/<italic>cis</italic>-MCH<sup>&#x2b;</sup>) to 1.5&#xa0;&#xc5; (<italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>/<italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub>). 2) The marker bands of merocyanine seen at 1540 and 1126&#xa0;cm<sup>&#x2212;1</sup> are very intense in the SERRS spectrum, although the 1540&#xa0;cm<sup>&#x2212;1</sup> band is much weaker in the SERS spectrum measured at 632.8 and 785&#xa0;nm. These results suggest that while the 1126&#xa0;cm<sup>&#x2212;1</sup> band is enhanced mainly due to the electromagnetic effect, the 1540&#xa0;cm<sup>&#x2212;1</sup> peak displays resonance enhancement in addition to the electromagnetic effect. 3) The excitation-dependent SERS spectrum thus, infers that in addition to the major contribution from the electromagnetic enhancement, chemical (resonance) effect also leads to amplification of the 1540&#xa0;cm<sup>&#x2212;1</sup> band. 4) The comparative study of the excitation-dependent SERS study and the computed Raman activity under static and in preresonance excitation conditions confirm the predominance of the <italic>trans</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub> form bound to the nanostructured surface via the phenoxyl ring O atom with minor contribution from the <italic>cis</italic>-MCH<sup>&#x2b;</sup>-Ag<sub>4</sub> conformer.</p>
</sec>
</sec>
<sec sec-type="conclusion" id="s5">
<title>Conclusion</title>
<p>In this article, a comprehensive structural and vibrational analysis of merocyanine is reported in solid, acetonitrile solution and adsorbed on the nanostructured surface of silver-coated films (SCFs) using Raman scattering in combination with DFT studies. The Raman spectrum of solid merocyanine in combination with DFT calculations inferred the existence of the <italic>trans</italic>- and <italic>cis</italic>-conformers of the protonated form of merocyanine (MCH<sup>&#x2b;</sup>) in the solid state. The Raman study of merocyanine in acetonitrile solution indicated major contribution from the <italic>trans</italic>- and <italic>cis</italic>-conformers of MCH<sup>&#x2b;</sup> remaining in equilibrium, although the computed absorption spectrum in acetonitrile indicated the prevalence of the cis-MC conformer in acetonitrile. The presence of the protonated forms of merocyanine in solid and acetonitrile solution confirm the predominance of benzenoid structure. The prominent marker bands, observed in the Raman spectrum of merocyanine in acetonitrile at 1538 (ethylenic C&#x3d;C stretch) and 1133&#xa0;cm<sup>&#x2212;1</sup> (pyridinium C-N stretch) were shifted to 1540 and 1126&#xa0;cm<sup>&#x2212;1</sup> on the nanostructured SCFs. The appearance of the marker bands as well as the band shifts in SERRS is associated with the selective binding of the <italic>trans</italic>-MCH<sup>&#x2b;</sup> conformer on the nanostructured metal surface that assumes benzenoid structure and is exclusively bound via the active anchoring site, viz., the phenoxyl group O atom. The concentration-dependent SERRS spectrum of merocyanine functionalized SCFs showed maximum enhancement at 1&#xa0;&#x3bc;M concentration for all observed vibrations indicating monolayer coverage of the adsorbate. The SERRS study also revealed sub-nanomolar (0.1&#xa0;nM) sensing of merocyanine using nanostructured SCFs with the analytical enhancement factor (AEF) of &#x223c; 10<sup>10</sup> for the 1126&#xa0;cm<sup>&#x2212;1</sup> and 1540&#xa0;cm<sup>&#x2212;1</sup> Raman bands for MC concentration of 0.1&#xa0;nM. The excitation-dependent SERS study infers that in addition to the major contribution from the electromagnetic enhancement, chemical (resonance) effect leads to the amplification of the 1540&#xa0;cm<sup>&#x2212;1</sup> band. The observed conformational surface selectivity of the <italic>trans</italic>-isomer of protonated merocyanine using nanostructured surfaces can be further exploited for energy efficient and economical separation of geometrical isomers.</p>
</sec>
</body>
<back>
<sec id="s6">
<title>Data Availability Statement</title>
<p>The original contributions presented in the study are included in the article/<xref ref-type="sec" rid="s10">Supplementary Material</xref>, further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="s7">
<title>Author Contributions</title>
<p>AD and RC carried out literature survey and data curation, AM synthesized the merocyanine dye, NM carried out data analysis and manuscript preparation. All authors have contributed to the manuscript and approved it for publication.</p>
</sec>
<sec sec-type="COI-statement" id="s8">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s9">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
<ack>
<p>The authors thank Awadhesh Kumar, Head, RPCD, and A. K. Tyagi, Director, Chemistry Group, BARC, for their kind support and encouragement.</p>
</ack>
<sec id="s10">
<title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fchem.2022.902585/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fchem.2022.902585/full&#x23;supplementary-material</ext-link>
</p>
<supplementary-material xlink:href="DataSheet1.PDF" id="SM1" mimetype="application/PDF" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
<ref-list>
<title>References</title>
<ref id="B1">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Allison</surname>
<given-names>R. R.</given-names>
</name>
<name>
<surname>Downie</surname>
<given-names>G. H.</given-names>
</name>
<name>
<surname>Cuenca</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Hu</surname>
<given-names>X.-H.</given-names>
</name>
<name>
<surname>Childs</surname>
<given-names>C. J.</given-names>
</name>
<name>
<surname>Sibata</surname>
<given-names>C. H.</given-names>
</name>
</person-group> (<year>2004</year>). <article-title>Photosensitizers in Clinical PDT</article-title>. <source>Photodiagn. Photodyn. Ther.</source> <volume>1</volume>, <fpage>27</fpage>&#x2013;<lpage>42</lpage>. <pub-id pub-id-type="doi">10.1016/s1572-1000(04)00007-9</pub-id> </citation>
</ref>
<ref id="B2">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Becke</surname>
<given-names>A. D.</given-names>
</name>
</person-group> (<year>1993</year>). <article-title>A New Mixing of Hartree-Fock and Local Density&#x2010;functional Theories</article-title>. <source>J. Chem. Phys.</source> <volume>98</volume>, <fpage>1372</fpage>&#x2013;<lpage>1377</lpage>. <pub-id pub-id-type="doi">10.1063/1.464304</pub-id> </citation>
</ref>
<ref id="B3">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ben-Jaber</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Peveler</surname>
<given-names>W. J.</given-names>
</name>
<name>
<surname>Quesada-Cabrera</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Sol</surname>
<given-names>C. W. O.</given-names>
</name>
<name>
<surname>Papakonstantinou</surname>
<given-names>I.</given-names>
</name>
<name>
<surname>Parkin</surname>
<given-names>I. P.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Sensitive and Specific Detection of Explosives in Solution and Vapour by Surface-Enhanced Raman Spectroscopy on Silver Nanocubes</article-title>. <source>Nanoscale</source> <volume>9</volume>, <fpage>16459</fpage>&#x2013;<lpage>16466</lpage>. <pub-id pub-id-type="doi">10.1039/c7nr05057g</pub-id> </citation>
</ref>
<ref id="B4">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Bilici</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Cetin</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Ayd&#x131;ndogan</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Yagci Acar</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Kolemen</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Recent Advances in Cyanine-Based Phototherapy Agents</article-title>. <source>Front. Chem.</source> <volume>9</volume>, <fpage>707876</fpage>. <pub-id pub-id-type="doi">10.3389/fchem.2021.707876</pub-id> </citation>
</ref>
<ref id="B5">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Biswas</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Umapathy</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>1998</year>). <article-title>Partitioning of the Total Reorganization Energy into its Vibrational and Solvent (Inertial and Reorientational) Contributions Using Resonance Raman Intensities</article-title>. <source>Chem. Phys. Lett.</source> <volume>294</volume>, <fpage>181</fpage>&#x2013;<lpage>190</lpage>. <pub-id pub-id-type="doi">10.1016/s0009-2614(98)00848-3</pub-id> </citation>
</ref>
<ref id="B6">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Biswas</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Umapathy</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2001</year>). <article-title>Study of Solvent Effects on the Molecular Structure and the Reorganization Energies of 4-Nitro-4&#x2032;-Dimethylaminoazobenzene Using Resonance Raman Intensities</article-title>. <source>J. Raman Spectrosc.</source> <volume>32</volume>, <fpage>471</fpage>&#x2013;<lpage>480</lpage>. <pub-id pub-id-type="doi">10.1002/jrs.747</pub-id> </citation>
</ref>
<ref id="B7">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Biswas</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Abraham</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Umapathy</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Investigation of Short-Time Isomerization Dynamics in P-Nitroazobenzene from Resonance Raman Intensity Analysis</article-title>. <source>J. Phys. Chem. A</source> <volume>106</volume>, <fpage>9397</fpage>&#x2013;<lpage>9406</lpage>. <pub-id pub-id-type="doi">10.1021/jp0108162</pub-id> </citation>
</ref>
<ref id="B8">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Biswas</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Thomas</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Mishra</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Wategaonkar</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Venkateswaran</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2006</year>). <article-title>Surface-Enhanced Resonance Raman Scattering and Density Functional Calculations of Hemicyanine Adsorbed on Colloidal Silver Surface</article-title>. <source>J. Phys. Chem. A</source> <volume>110</volume>, <fpage>1805</fpage>&#x2013;<lpage>1811</lpage>. <pub-id pub-id-type="doi">10.1021/jp055330q</pub-id> </citation>
</ref>
<ref id="B9">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Biswas</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Thomas</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Mishra</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Wategaonkar</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Mukherjee</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Studies on Adsorption of Mono- and Multi-Chromophoric Hemicyanine Dyes on Silver Nanoparticles by Surface-Enhanced Resonance Raman and Theoretical Calculations</article-title>. <source>J. Chem. Phys.</source> <volume>129</volume>, <fpage>184702</fpage>. <pub-id pub-id-type="doi">10.1063/1.3009626</pub-id> </citation>
</ref>
<ref id="B10">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Biswas</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Thomas</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Sarkar</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Mukherjee</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>Probing the Adsorption Mechanism in Thiamazole Bound to the Silver Surface with Surface-Enhanced Raman Scattering and DFT</article-title>. <source>Chem. Phys. Lett.</source> <volume>479</volume>, <fpage>248</fpage>&#x2013;<lpage>254</lpage>. <pub-id pub-id-type="doi">10.1016/j.cplett.2009.08.022</pub-id> </citation>
</ref>
<ref id="B11">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Campion</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Ivanecky</surname>
<given-names>J. E.</given-names>
</name>
<name>
<surname>Child</surname>
<given-names>C. M.</given-names>
</name>
<name>
<surname>Foster</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>1995</year>). <article-title>On the Mechanism of Chemical Enhancement in Surface-Enhanced Raman Scattering</article-title>. <source>J. Am. Chem. Soc.</source> <volume>117</volume>, <fpage>11807</fpage>&#x2013;<lpage>11808</lpage>. <pub-id pub-id-type="doi">10.1021/ja00152a024</pub-id> </citation>
</ref>
<ref id="B12">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Carvalho</surname>
<given-names>B. R.</given-names>
</name>
<name>
<surname>Pimenta</surname>
<given-names>M. A.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Resonance Raman Spectroscopy in Semiconducting Transition-Metal Dichalcogenides: Basic Properties and Perspectives</article-title>. <source>2D Mat.</source> <volume>7</volume>, <fpage>042001</fpage>. <pub-id pub-id-type="doi">10.1088/2053-1583/ab98ef</pub-id> </citation>
</ref>
<ref id="B13">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chadha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Catalytic Reactions on the Surface of Ag Nanoparticles: A Photochemical Effect And/or Molecule Property?</article-title> <source>J. Phys. Chem. C</source> <volume>118</volume>, <fpage>26227</fpage>&#x2013;<lpage>26235</lpage>. <pub-id pub-id-type="doi">10.1021/jp509190f</pub-id> </citation>
</ref>
<ref id="B14">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chadha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Das</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Debnath</surname>
<given-names>A. K.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
</person-group> (<year>2021a</year>). <article-title>2-Thiazoline-2-Thiol Functionalized Gold Nanoparticles for Detection of Heavy Metals, Hg(II) and Pb(II) and Probing Their Competitive Surface Reactivity: A Colorimetric, Surface Enhanced Raman Scattering (SERS) and X-Ray Photoelectron Spectroscopic (XPS) Study</article-title>. <source>Colloids Surf. A.</source> <volume>615</volume>, <fpage>126279</fpage>. <pub-id pub-id-type="doi">10.1016/j.colsurfa.2021.126279</pub-id> </citation>
</ref>
<ref id="B15">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chadha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Das</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
</person-group> (<year>2021b</year>). <article-title>Surface-induced Dimerization of 2-Thiazoline-2-Thiol on Silver and Gold Nanoparticles: A Surface Enhanced Raman Scattering (SERS) and Density Functional Theoretical (DFT) Study</article-title>. <source>J. Mol. Liq.</source> <volume>322</volume>, <fpage>114536</fpage>. <pub-id pub-id-type="doi">10.1016/j.molliq.2020.114536</pub-id> </citation>
</ref>
<ref id="B16">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chadha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Das</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Lobo</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Meenu</surname>
<given-names>V. O.</given-names>
</name>
<name>
<surname>Paul</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Ballal</surname>
<given-names>A.</given-names>
</name>
<etal/>
</person-group> (<year>2022</year>). <article-title>&#x3b3;-Cyclodextrin Capped Silver and Gold Nanoparticles as Colorimetric and Raman Sensor for Detecting Traces of Pesticide "Chlorpyrifos" in Fruits and Vegetables</article-title>. <source>Colloids Surf. A.</source> <volume>641</volume>, <fpage>128558</fpage>. <pub-id pub-id-type="doi">10.1016/j.colsurfa.2022.128558</pub-id> </citation>
</ref>
<ref id="B17">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chaloupkov&#xe1;</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Balzerov&#xe1;</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Ba&#x159;inkov&#xe1;</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Med&#x159;&#xed;kov&#xe1;</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>&#x160;&#xe1;cha</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Bene&#x161;</surname>
<given-names>P.</given-names>
</name>
<etal/>
</person-group> (<year>2018</year>). <article-title>Label-free Determination of Prostate Specific Membrane Antigen in Human Whole Blood at Nanomolar Levels by Magnetically Assisted Surface Enhanced Raman Spectroscopy</article-title>. <source>Anal. Chim. Acta</source> <volume>997</volume>, <fpage>44</fpage>&#x2013;<lpage>51</lpage>. <pub-id pub-id-type="doi">10.1016/j.aca.2017.10.008</pub-id> </citation>
</ref>
<ref id="B18">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Chowdhury</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Ghosh</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Pal</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Misra</surname>
<given-names>T. N.</given-names>
</name>
</person-group> (<year>2003</year>). <article-title>Concentration-dependent Surface-Enhanced Resonance Raman Scattering of a Porphyrin Derivative Adsorbed on Colloidal Silver Particles</article-title>. <source>J. Colloid Interface Sci.</source> <volume>263</volume>, <fpage>318</fpage>&#x2013;<lpage>326</lpage>. <pub-id pub-id-type="doi">10.1016/s0021-9797(03)00022-5</pub-id> </citation>
</ref>
<ref id="B19">
<citation citation-type="book">
<person-group person-group-type="author">
<name>
<surname>Das</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
</person-group> (<year>2022</year>). &#x201c;<article-title>Synthesis of Functionalized Noble Metal Nanoparticles</article-title>,&#x201d; in <source>Handbook on Synthesis Strategies for Advanced Materials: Volume-II: Processing and Functionalization of Materials</source>. Editors <person-group person-group-type="editor">
<name>
<surname>Tyagi</surname>
<given-names>A. K.</given-names>
</name>
<name>
<surname>Ningthoujam</surname>
<given-names>R. S.</given-names>
</name>
</person-group> (<publisher-loc>Singapore</publisher-loc>: <publisher-name>Springer Singapore</publisher-name>), <fpage>515</fpage>&#x2013;<lpage>580</lpage>. <pub-id pub-id-type="doi">10.1007/978-981-16-1803-1_13</pub-id> </citation>
</ref>
<ref id="B20">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Das</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Dhayagude</surname>
<given-names>A. C.</given-names>
</name>
<name>
<surname>Pathak</surname>
<given-names>A. K.</given-names>
</name>
<name>
<surname>Chadha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Neogy</surname>
<given-names>S.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>A Study of Light Induced Surface Reactions of Sildenafil Citrate on Hybrid AgCl/Ag Nanoparticle Dimers by Surface Enhanced Raman Scattering and Pulse Radiolysis Techniques</article-title>. <source>Colloids Surf. A.</source> <volume>582</volume>, <fpage>123864</fpage>. <pub-id pub-id-type="doi">10.1016/j.colsurfa.2019.123864</pub-id> </citation>
</ref>
<ref id="B21">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Das</surname>
<given-names>S. K.</given-names>
</name>
<name>
<surname>Bhattacharya</surname>
<given-names>T. S.</given-names>
</name>
<name>
<surname>Chowdhury</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Deciphering the Near-Field Response with the Far-Field Wavelength-Scanned SERS Spectra of 4-mercaptopyridine Adsorbed on Gold Nanocolloidal Particles Entrapped in Langmuir Reverse Schaefer Film of 5CB Liquid Crystal Molecules</article-title>. <source>Phys. Chem. Chem. Phys.</source> <volume>22</volume>, <fpage>8719</fpage>&#x2013;<lpage>8729</lpage>. <pub-id pub-id-type="doi">10.1039/c9cp06925a</pub-id> </citation>
</ref>
<ref id="B22">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Das</surname>
<given-names>S. K.</given-names>
</name>
<name>
<surname>Bhattacharya</surname>
<given-names>T. S.</given-names>
</name>
<name>
<surname>Ghosh</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Chowdhury</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Probing Blood Plasma Samples for the Detection of Diabetes Using SERS Aided by PCA and LDA Multivariate Data Analyses</article-title>. <source>New J. Chem.</source> <volume>45</volume>, <fpage>2670</fpage>&#x2013;<lpage>2682</lpage>. <pub-id pub-id-type="doi">10.1039/d0nj04508j</pub-id> </citation>
</ref>
<ref id="B23">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dhayagude</surname>
<given-names>A. C.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Debnath</surname>
<given-names>A. K.</given-names>
</name>
<name>
<surname>Joshi</surname>
<given-names>S. S.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Metal Nanoparticle Catalyzed Charge Rearrangement in Selenourea Probed by Surface-Enhanced Raman Scattering</article-title>. <source>RSC Adv.</source> <volume>6</volume>, <fpage>17405</fpage>&#x2013;<lpage>17414</lpage>. <pub-id pub-id-type="doi">10.1039/c5ra24583d</pub-id> </citation>
</ref>
<ref id="B24">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dhayagude</surname>
<given-names>A. C.</given-names>
</name>
<name>
<surname>Debnath</surname>
<given-names>A. K.</given-names>
</name>
<name>
<surname>Joshi</surname>
<given-names>S. S.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Adsorption of L&#x2010;selenomethionine and L&#x2010;selenocystine on the Surface of Silver Nanoparticles: A Spectroscopic Study</article-title>. <source>Nano Sel.</source> <volume>2</volume>, <fpage>47</fpage>&#x2013;<lpage>60</lpage>. <pub-id pub-id-type="doi">10.1002/nano.202000061</pub-id> </citation>
</ref>
<ref id="B25">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dissanayake</surname>
<given-names>N. M.</given-names>
</name>
<name>
<surname>Arachchilage</surname>
<given-names>J. S.</given-names>
</name>
<name>
<surname>Samuels</surname>
<given-names>T. A.</given-names>
</name>
<name>
<surname>Obare</surname>
<given-names>S. O.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Highly Sensitive Plasmonic Metal Nanoparticle-Based Sensors for the Detection of Organophosphorus Pesticides</article-title>. <source>Talanta</source> <volume>200</volume>, <fpage>218</fpage>&#x2013;<lpage>227</lpage>. <pub-id pub-id-type="doi">10.1016/j.talanta.2019.03.042</pub-id> </citation>
</ref>
<ref id="B26">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Dutta Roy</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Ghosh</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Chowdhury</surname>
<given-names>J.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Near-Field Response on the Far-Field Wavelength-Scanned Surface-Enhanced Raman Spectroscopic Study of Methylene Blue Adsorbed on Gold Nanocolloidal Particles</article-title>. <source>J. Phys. Chem. C</source> <volume>122</volume>, <fpage>10981</fpage>&#x2013;<lpage>10991</lpage>. <pub-id pub-id-type="doi">10.1021/acs.jpcc.8b00315</pub-id> </citation>
</ref>
<ref id="B27">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Edwin</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Amalanathan</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Chadha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Hubert Joe</surname>
<given-names>I.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Structure Activity Relationship, Vibrational Spectral Investigation and Molecular Docking Analysis of Anti-neuronal Drug 4-(2-Aminoethyl) Morpholine</article-title>. <source>J. Mol. Struct.</source> <volume>1148</volume>, <fpage>459</fpage>&#x2013;<lpage>470</lpage>. <pub-id pub-id-type="doi">10.1016/j.molstruc.2017.07.075</pub-id> </citation>
</ref>
<ref id="B28">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Fan</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Andrade</surname>
<given-names>G. F. S.</given-names>
</name>
<name>
<surname>Brolo</surname>
<given-names>A. G.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>A Review on Recent Advances in the Applications of Surface-Enhanced Raman Scattering in Analytical Chemistry</article-title>. <source>Anal. Chim. Acta</source> <volume>1097</volume>, <fpage>1</fpage>&#x2013;<lpage>29</lpage>. <pub-id pub-id-type="doi">10.1016/j.aca.2019.11.049</pub-id> </citation>
</ref>
<ref id="B29">
<citation citation-type="book">
<person-group person-group-type="author">
<name>
<surname>Frisch</surname>
<given-names>M. J.</given-names>
</name>
<name>
<surname>Trucks</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Schlegel</surname>
<given-names>H. B.</given-names>
</name>
<name>
<surname>Scuseria</surname>
<given-names>G. E.</given-names>
</name>
<name>
<surname>Robb</surname>
<given-names>M. A.</given-names>
</name>
<name>
<surname>Cheeseman</surname>
<given-names>J. R.</given-names>
</name>
<etal/>
</person-group> (<year>2009</year>). <source>Gaussian 09</source>. <publisher-loc>Wallingford, CT</publisher-loc>: <publisher-name>Gaussian, Inc.</publisher-name>. </citation>
</ref>
<ref id="B30">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Guselnikova</surname>
<given-names>O.</given-names>
</name>
<name>
<surname>Postnikov</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Erzina</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Kalachyova</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>&#x160;vor&#x10d;&#xed;k</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Lyutakov</surname>
<given-names>O.</given-names>
</name>
</person-group> (<year>2017</year>). <article-title>Pretreatment-free Selective and Reproducible SERS-Based Detection of Heavy Metal Ions on DTPA Functionalized Plasmonic Platform</article-title>. <source>Sens. Actuators B Chem.</source> <volume>253</volume>, <fpage>830</fpage>&#x2013;<lpage>838</lpage>. <pub-id pub-id-type="doi">10.1016/j.snb.2017.07.018</pub-id> </citation>
</ref>
<ref id="B31">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Han</surname>
<given-names>X. X.</given-names>
</name>
<name>
<surname>Rodriguez</surname>
<given-names>R. S.</given-names>
</name>
<name>
<surname>Haynes</surname>
<given-names>C. L.</given-names>
</name>
<name>
<surname>Ozaki</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Zhao</surname>
<given-names>B.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Surface-enhanced Raman Spectroscopy</article-title>. <source>Nat. Rev. Methods Prim.</source> <volume>1</volume>, <fpage>87</fpage>. <pub-id pub-id-type="doi">10.1038/s43586-021-00083-6</pub-id> </citation>
</ref>
<ref id="B32">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Huang</surname>
<given-names>Y.-F.</given-names>
</name>
<name>
<surname>Zhu</surname>
<given-names>H.-P.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>G.-K.</given-names>
</name>
<name>
<surname>Wu</surname>
<given-names>D.-Y.</given-names>
</name>
<name>
<surname>Ren</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Tian</surname>
<given-names>Z.-Q.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>When the Signal Is Not from the Original Molecule to Be Detected: Chemical Transformation of Para-Aminothiophenol on Ag during the SERS Measurement</article-title>. <source>J. Am. Chem. Soc.</source> <volume>132</volume>, <fpage>9244</fpage>&#x2013;<lpage>9246</lpage>. <pub-id pub-id-type="doi">10.1021/ja101107z</pub-id> </citation>
</ref>
<ref id="B33">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Itoh</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Hayashi</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Hamanaka</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Yamamoto</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Araki</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Iriyama</surname>
<given-names>K.</given-names>
</name>
</person-group> (<year>1992</year>). <article-title>Infrared and Raman Scattering Spectroscopic Study on the Structures of Langmuir-Blodgett Monolayers Containing a Merocyanine Dye</article-title>. <source>Langmuir</source> <volume>8</volume>, <fpage>140</fpage>&#x2013;<lpage>147</lpage>. <pub-id pub-id-type="doi">10.1021/la00037a027</pub-id> </citation>
</ref>
<ref id="B34">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jacob</surname>
<given-names>J. A.</given-names>
</name>
<name>
<surname>Biswas</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Mukherjee</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Effect of Plant-Based Phenol Derivatives on the Formation of Cu and Ag Nanoparticles</article-title>. <source>Colloids Surfaces B Biointerfaces</source> <volume>87</volume>, <fpage>49</fpage>&#x2013;<lpage>53</lpage>. <pub-id pub-id-type="doi">10.1016/j.colsurfb.2011.04.036</pub-id> </citation>
</ref>
<ref id="B35">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jain</surname>
<given-names>P. K.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>El-Sayed</surname>
<given-names>I. H.</given-names>
</name>
<name>
<surname>El-Sayed</surname>
<given-names>M. A.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>Review of Some Interesting Surface Plasmon Resonance-Enhanced Properties of Noble Metal Nanoparticles and Their Applications to Biosystems</article-title>. <source>Plasmonics</source> <volume>2</volume>, <fpage>107</fpage>&#x2013;<lpage>118</lpage>. <pub-id pub-id-type="doi">10.1007/s11468-007-9031-1</pub-id> </citation>
</ref>
<ref id="B36">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jana</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Ganguly</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Pal</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Enlightening Surface Plasmon Resonance Effect of Metal Nanoparticles for Practical Spectroscopic Application</article-title>. <source>RSC Adv.</source> <volume>6</volume>, <fpage>86174</fpage>&#x2013;<lpage>86211</lpage>. <pub-id pub-id-type="doi">10.1039/c6ra14173k</pub-id> </citation>
</ref>
<ref id="B37">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Jensen</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Aikens</surname>
<given-names>C. M.</given-names>
</name>
<name>
<surname>Schatz</surname>
<given-names>G. C.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Electronic Structure Methods for Studying Surface-Enhanced Raman Scattering</article-title>. <source>Chem. Soc. Rev.</source> <volume>37</volume>, <fpage>1061</fpage>&#x2013;<lpage>1073</lpage>. <pub-id pub-id-type="doi">10.1039/b706023h</pub-id> </citation>
</ref>
<ref id="B38">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kang</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Tsai</surname>
<given-names>H.</given-names>
</name>
<name>
<surname>Han</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Wang</surname>
<given-names>H.-L.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Laser Wavelength- and Power-dependent Plasmon-Driven Chemical Reactions Monitored Using Single Particle Surface Enhanced Raman Spectroscopy</article-title>. <source>Chem. Commun.</source> <volume>49</volume>, <fpage>3389</fpage>&#x2013;<lpage>3391</lpage>. <pub-id pub-id-type="doi">10.1039/c3cc40732b</pub-id> </citation>
</ref>
<ref id="B39">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kitahama</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Ozaki</surname>
<given-names>Y.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Surface-enhanced Resonance Raman Scattering of Hemoproteins and Those in Complicated Biological Systems</article-title>. <source>Analyst</source> <volume>141</volume>, <fpage>5020</fpage>&#x2013;<lpage>5036</lpage>. <pub-id pub-id-type="doi">10.1039/c6an01009a</pub-id> </citation>
</ref>
<ref id="B40">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kumar</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Thomas</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Rao</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Kshirsagar</surname>
<given-names>R. J.</given-names>
</name>
</person-group> (<year>2019a</year>). <article-title>Plasmon-Induced Dimerization of Thiazolidine-2,4-Dione on Silver Nanoparticles: Revealed by Surface-Enhanced Raman Scattering Study</article-title>. <source>J. Phys. Chem. A</source> <volume>123</volume>, <fpage>9770</fpage>&#x2013;<lpage>9780</lpage>. <pub-id pub-id-type="doi">10.1021/acs.jpca.9b07367</pub-id> </citation>
</ref>
<ref id="B41">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Kumar</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Thomas</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Rao</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Kshirsagar</surname>
<given-names>R. J.</given-names>
</name>
</person-group> (<year>2019b</year>). <article-title>Surface-Enhanced Raman Scattering Based Sensing of Trans-urocanic Acid, an Epidermal Photoreceptor Using Silver Nanoparticles Aided by Density Functional Theoretical Calculations</article-title>. <source>J. Raman Spectrosc.</source> <volume>50</volume>, <fpage>837</fpage>&#x2013;<lpage>846</lpage>. <pub-id pub-id-type="doi">10.1002/jrs.5590</pub-id> </citation>
</ref>
<ref id="B42">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Langer</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Jimenez De Aberasturi</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Aizpurua</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Alvarez-Puebla</surname>
<given-names>R. A.</given-names>
</name>
<name>
<surname>Augui&#xe9;</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Baumberg</surname>
<given-names>J. J.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>Present and Future of Surface-Enhanced Raman Scattering</article-title>. <source>ACS Nano</source> <volume>14</volume>, <fpage>28</fpage>&#x2013;<lpage>117</lpage>. <pub-id pub-id-type="doi">10.1021/acsnano.9b04224</pub-id> </citation>
</ref>
<ref id="B43">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Le Ru</surname>
<given-names>E. C.</given-names>
</name>
<name>
<surname>Etchegoin</surname>
<given-names>P. G.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Single-Molecule Surface-Enhanced Raman Spectroscopy</article-title>. <source>Annu. Rev. Phys. Chem.</source> <volume>63</volume>, <fpage>65</fpage>&#x2013;<lpage>87</lpage>. <pub-id pub-id-type="doi">10.1146/annurev-physchem-032511-143757</pub-id> </citation>
</ref>
<ref id="B44">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Le Ru</surname>
<given-names>E. C.</given-names>
</name>
<name>
<surname>Blackie</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Meyer</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Etchegoin</surname>
<given-names>P. G.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>Surface Enhanced Raman Scattering Enhancement Factors: A Comprehensive Study</article-title>. <source>J. Phys. Chem. C</source> <volume>111</volume>, <fpage>13794</fpage>&#x2013;<lpage>13803</lpage>. <pub-id pub-id-type="doi">10.1021/jp0687908</pub-id> </citation>
</ref>
<ref id="B45">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Leng</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>W&#xfc;rthner</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Kelley</surname>
<given-names>A. M.</given-names>
</name>
</person-group> (<year>2004</year>). <article-title>Resonance Raman Intensity Analysis of Merocyanine Dimers in Solution</article-title>. <source>J. Phys. Chem. B</source> <volume>108</volume>, <fpage>10284</fpage>&#x2013;<lpage>10294</lpage>. <pub-id pub-id-type="doi">10.1021/jp037371x</pub-id> </citation>
</ref>
<ref id="B46">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Levine</surname>
<given-names>B. F.</given-names>
</name>
<name>
<surname>Bethea</surname>
<given-names>C. G.</given-names>
</name>
<name>
<surname>Wasserman</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Leenders</surname>
<given-names>L.</given-names>
</name>
</person-group> (<year>1978</year>). <article-title>Solvent Dependent Hyperpolarizability of a Merocyanine Dye</article-title>. <source>J. Chem. Phys.</source> <volume>68</volume>, <fpage>5042</fpage>&#x2013;<lpage>5045</lpage>. <pub-id pub-id-type="doi">10.1063/1.435620</pub-id> </citation>
</ref>
<ref id="B47">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Li</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Huang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>Q.</given-names>
</name>
<name>
<surname>Ye</surname>
<given-names>Z.</given-names>
</name>
<etal/>
</person-group> (<year>2021</year>). <article-title>Towards Practical and Sustainable SERS: a Review of Recent Developments in the Construction of Multifunctional Enhancing Substrates</article-title>. <source>J. Mat. Chem. C</source> <volume>9</volume>, <fpage>11517</fpage>&#x2013;<lpage>11552</lpage>. <pub-id pub-id-type="doi">10.1039/d1tc02134f</pub-id> </citation>
</ref>
<ref id="B48">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Litti</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Colusso</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Pinto</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Ruli</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Scarsi</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Ventura</surname>
<given-names>L.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>SERRS Multiplexing with Multivalent Nanostructures for the Identification and Enumeration of Epithelial and Mesenchymal Cells</article-title>. <source>Sci. Rep.</source> <volume>10</volume>, <fpage>15805</fpage>. <pub-id pub-id-type="doi">10.1038/s41598-020-72911-w</pub-id> </citation>
</ref>
<ref id="B49">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Mukherjee</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Tulsi Mukherjee</surname>
<given-names>A.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Surface-enhanced Raman Scattering (SERS) Spectroscopy for Trace Level Detection of Chlorogenic Acid</article-title>. <source>Adv. Mat. Lett.</source> <volume>4</volume>, <fpage>502</fpage>&#x2013;<lpage>506</lpage>. <pub-id pub-id-type="doi">10.5185/amlett.2012.ib.121</pub-id> </citation>
</ref>
<ref id="B50">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Chadha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Das</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2015</year>). <article-title>Adsorption and Sub-nanomolar Sensing of Thioflavin T on Colloidal Gold Nanoparticles, Silver Nanoparticles and Silver-Coated Films Studied Using Surface-Enhanced Raman Scattering</article-title>. <source>Spectrochim. Acta Part A Mol. Biomol. Spectrosc.</source> <volume>149</volume>, <fpage>949</fpage>&#x2013;<lpage>956</lpage>. <pub-id pub-id-type="doi">10.1016/j.saa.2015.05.043</pub-id> </citation>
</ref>
<ref id="B51">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Chadha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Das</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Surface Selective Binding of 2,5-Dimercapto-1,3,4-Thiadiazole (DMTD) on Silver and Gold Nanoparticles: a Raman and DFT Study</article-title>. <source>RSC Adv.</source> <volume>6</volume>, <fpage>62529</fpage>&#x2013;<lpage>62539</lpage>. <pub-id pub-id-type="doi">10.1039/c6ra10404e</pub-id> </citation>
</ref>
<ref id="B52">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mane</surname>
<given-names>P. C.</given-names>
</name>
<name>
<surname>Shinde</surname>
<given-names>M. D.</given-names>
</name>
<name>
<surname>Varma</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Chaudhari</surname>
<given-names>B. P.</given-names>
</name>
<name>
<surname>Fatehmulla</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Shahabuddin</surname>
<given-names>M.</given-names>
</name>
<etal/>
</person-group> (<year>2020</year>). <article-title>Highly Sensitive Label-free Bio-Interfacial Colorimetric Sensor Based on Silk Fibroin-Gold Nanocomposite for Facile Detection of Chlorpyrifos Pesticide</article-title>. <source>Sci. Rep.</source> <volume>10</volume>, <fpage>4198</fpage>. <pub-id pub-id-type="doi">10.1038/s41598-020-61130-y</pub-id> </citation>
</ref>
<ref id="B53">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Manzoni</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Coutinho</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Canuto</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>An Insightful Approach for Understanding Solvatochromic Reversal</article-title>. <source>Chem. Phys. Lett.</source> <volume>655-656</volume>, <fpage>30</fpage>&#x2013;<lpage>34</lpage>. <pub-id pub-id-type="doi">10.1016/j.cplett.2016.05.028</pub-id> </citation>
</ref>
<ref id="B54">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Med&#x159;&#xed;kov&#xe1;</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Jakubec</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Ranc</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Bakandritsos</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Ka&#x161;l&#xed;k</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Zbo&#x159;il</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Carboxymethylcellulose-based Magnetic Au or Ag Nanosystems: Eminent Candidates in Catalysis, Sensing Applications Based on SERS, and Electrochemistry</article-title>. <source>Appl. Mater. Today</source> <volume>14</volume>, <fpage>143</fpage>&#x2013;<lpage>150</lpage>. <pub-id pub-id-type="doi">10.1016/j.apmt.2018.12.001</pub-id> </citation>
</ref>
<ref id="B55">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mineo</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Itoh</surname>
<given-names>K.</given-names>
</name>
</person-group> (<year>1991</year>). <article-title>Surface-enhanced Resonance Raman Scattering Study on the Structure of a Merocyanine Dye, 4-(2-(4-Hydroxyphenyl)ethenyl)-1-Methylpyridinium, Adsorbed on Silver Surfaces in Water and in Acetonitrile</article-title>. <source>J. Phys. Chem.</source> <volume>95</volume>, <fpage>2451</fpage>&#x2013;<lpage>2456</lpage>. <pub-id pub-id-type="doi">10.1021/j100159a063</pub-id> </citation>
</ref>
<ref id="B56">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Mirajkar</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Dhayagude</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Suprasanna</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Distinguishing Genomic DNA of Brassica Juncea and <italic>Arabidopsis thaliana</italic> Using Surface&#x2010;enhanced Raman Scattering</article-title>. <source>J. Raman Spectrosc.</source> <volume>51</volume>, <fpage>89</fpage>&#x2013;<lpage>103</lpage>. <pub-id pub-id-type="doi">10.1002/jrs.5758</pub-id> </citation>
</ref>
<ref id="B57">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Murugan</surname>
<given-names>N. A.</given-names>
</name>
<name>
<surname>Kongsted</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Rinkevicius</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>&#xc5;gren</surname>
<given-names>H.</given-names>
</name>
</person-group> (<year>2011</year>). <article-title>Demystifying the Solvatochromic Reversal in Brooker&#x27;s Merocyanine Dye</article-title>. <source>Phys. Chem. Chem. Phys.</source> <volume>13</volume>, <fpage>1290</fpage>&#x2013;<lpage>1292</lpage>. <pub-id pub-id-type="doi">10.1039/c0cp01014f</pub-id> </citation>
</ref>
<ref id="B58">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Neugebauer</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Reiher</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Kind</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Hess</surname>
<given-names>B. A.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Quantum Chemical Calculation of Vibrational Spectra of Large Molecules&#x2013;Raman and IR Spectra for Buckminsterfullerene</article-title>. <source>J. Comput. Chem.</source> <volume>23</volume>, <fpage>895</fpage>&#x2013;<lpage>910</lpage>. <pub-id pub-id-type="doi">10.1002/jcc.10089</pub-id> </citation>
</ref>
<ref id="B59">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Nicolson</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Jamieson</surname>
<given-names>L. E.</given-names>
</name>
<name>
<surname>Mabbott</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Plakas</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Shand</surname>
<given-names>N. C.</given-names>
</name>
<name>
<surname>Detty</surname>
<given-names>M. R.</given-names>
</name>
<etal/>
</person-group> (<year>2018</year>). <article-title>Surface Enhanced Resonance Raman Spectroscopy (SERRS) for Probing through Plastic and Tissue Barriers Using a Handheld Spectrometer</article-title>. <source>Analyst</source> <volume>143</volume>, <fpage>5965</fpage>&#x2013;<lpage>5973</lpage>. <pub-id pub-id-type="doi">10.1039/c8an01249k</pub-id> </citation>
</ref>
<ref id="B60">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Nikolenko</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Strelchuk</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>Tsykaniuk</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Kysylychyn</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Capuzzo</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Bonanni</surname>
<given-names>A.</given-names>
</name>
</person-group> (<year>2019</year>). <article-title>Resonance Raman Spectroscopy of Mn-Mgk Cation Complexes in GaN</article-title>. <source>Crystals</source> <volume>9</volume>, <fpage>235</fpage>. <pub-id pub-id-type="doi">10.3390/cryst9050235</pub-id> </citation>
</ref>
<ref id="B61">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pajchrowski</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Abdali</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Norbygaard</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>Stilbazolium Merocyanine Dye Determination in Different Solutions, Concentrations and Colloids Using SERS</article-title>. <source>J. Raman Spectrosc.</source> <volume>38</volume>, <fpage>154</fpage>&#x2013;<lpage>158</lpage>. <pub-id pub-id-type="doi">10.1002/jrs.1616</pub-id> </citation>
</ref>
<ref id="B62">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pal</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Depero</surname>
<given-names>L. E.</given-names>
</name>
<name>
<surname>Alessandri</surname>
<given-names>I.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>Using Aggregates of Gold Nanorods in SER(R)S Experiments: an Empirical Evaluation of Some Critical Aspects</article-title>. <source>Nanotechnology</source> <volume>21</volume>, <fpage>425701</fpage>. <pub-id pub-id-type="doi">10.1088/0957-4484/21/42/425701</pub-id> </citation>
</ref>
<ref id="B63">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Pavel</surname>
<given-names>I. E.</given-names>
</name>
<name>
<surname>Alnajjar</surname>
<given-names>K. S.</given-names>
</name>
<name>
<surname>Monahan</surname>
<given-names>J. L.</given-names>
</name>
<name>
<surname>Stahler</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Hunter</surname>
<given-names>N. E.</given-names>
</name>
<name>
<surname>Weaver</surname>
<given-names>K. M.</given-names>
</name>
<etal/>
</person-group> (<year>2012</year>). <article-title>Estimating the Analytical and Surface Enhancement Factors in Surface-Enhanced Raman Scattering (SERS): A Novel Physical Chemistry and Nanotechnology Laboratory Experiment</article-title>. <source>J. Chem. Educ.</source> <volume>89</volume>, <fpage>286</fpage>&#x2013;<lpage>290</lpage>. <pub-id pub-id-type="doi">10.1021/ed200156n</pub-id> </citation>
</ref>
<ref id="B64">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>P&#xe9;rez-Jim&#xe9;nez</surname>
<given-names>A. I.</given-names>
</name>
<name>
<surname>Lyu</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Lu</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>Liu</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Ren</surname>
<given-names>B.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Surface-enhanced Raman Spectroscopy: Benefits, Trade-Offs and Future Developments</article-title>. <source>Chem. Sci.</source> <volume>11</volume>, <fpage>4563</fpage>&#x2013;<lpage>4577</lpage>. <pub-id pub-id-type="doi">10.1039/d0sc00809e</pub-id> </citation>
</ref>
<ref id="B65">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ranc</surname>
<given-names>V.</given-names>
</name>
<name>
<surname>&#x17d;i&#x17e;ka</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Chaloupkov&#xe1;</surname>
<given-names>Z.</given-names>
</name>
<name>
<surname>&#x160;ev&#x10d;&#xed;k</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Zbo&#x159;il</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2018</year>). <article-title>Imaging of Growth Factors on a Human Tooth Root Canal by Surface-Enhanced Raman Spectroscopy</article-title>. <source>Anal. Bioanal. Chem.</source> <volume>410</volume>, <fpage>7113</fpage>&#x2013;<lpage>7120</lpage>. <pub-id pub-id-type="doi">10.1007/s00216-018-1311-4</pub-id> </citation>
</ref>
<ref id="B66">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Reish</surname>
<given-names>M. E.</given-names>
</name>
<name>
<surname>Kay</surname>
<given-names>A. J.</given-names>
</name>
<name>
<surname>Teshome</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Asselberghs</surname>
<given-names>I.</given-names>
</name>
<name>
<surname>Clays</surname>
<given-names>K.</given-names>
</name>
<name>
<surname>Gordon</surname>
<given-names>K. C.</given-names>
</name>
</person-group> (<year>2012</year>). <article-title>Testing Computational Models of Hyperpolarizability in a Merocyanine Dye Using Spectroscopic and DFT Methods</article-title>. <source>J. Phys. Chem. A</source> <volume>116</volume>, <fpage>5453</fpage>&#x2013;<lpage>5463</lpage>. <pub-id pub-id-type="doi">10.1021/jp301455r</pub-id> </citation>
</ref>
<ref id="B67">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Ringe</surname>
<given-names>E.</given-names>
</name>
<name>
<surname>Sharma</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Henry</surname>
<given-names>A.-I.</given-names>
</name>
<name>
<surname>Marks</surname>
<given-names>L. D.</given-names>
</name>
<name>
<surname>Van Duyne</surname>
<given-names>R. P.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Single Nanoparticle Plasmonics</article-title>. <source>Phys. Chem. Chem. Phys.</source> <volume>15</volume>, <fpage>4110</fpage>&#x2013;<lpage>4129</lpage>. <pub-id pub-id-type="doi">10.1039/c3cp44574g</pub-id> </citation>
</ref>
<ref id="B68">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Rycenga</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Cobley</surname>
<given-names>C. M.</given-names>
</name>
<name>
<surname>Zeng</surname>
<given-names>J.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>W.</given-names>
</name>
<name>
<surname>Moran</surname>
<given-names>C. H.</given-names>
</name>
<name>
<surname>Zhang</surname>
<given-names>Q.</given-names>
</name>
<etal/>
</person-group> (<year>2011</year>). <article-title>Controlling the Synthesis and Assembly of Silver Nanostructures for Plasmonic Applications</article-title>. <source>Chem. Rev.</source> <volume>111</volume>, <fpage>3669</fpage>&#x2013;<lpage>3712</lpage>. <pub-id pub-id-type="doi">10.1021/cr100275d</pub-id> </citation>
</ref>
<ref id="B69">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sarkar</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Mukherjee</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2005</year>). <article-title>Preparation, Characterization, and Surface Modification of Silver Nanoparticles in Formamide</article-title>. <source>J. Phys. Chem. B</source> <volume>109</volume>, <fpage>7698</fpage>&#x2013;<lpage>7704</lpage>. <pub-id pub-id-type="doi">10.1021/jp044201r</pub-id> </citation>
</ref>
<ref id="B70">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Sarkar</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Chadha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Biswas</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Mukherjee</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2009</year>). <article-title>Phase-transfer and Film Formation of Silver Nanoparticles</article-title>. <source>J. Colloid Interface Sci.</source> <volume>332</volume>, <fpage>224</fpage>&#x2013;<lpage>230</lpage>. <pub-id pub-id-type="doi">10.1016/j.jcis.2008.12.059</pub-id> </citation>
</ref>
<ref id="B71">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Saviello</surname>
<given-names>D.</given-names>
</name>
<name>
<surname>Trabace</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Alyami</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Mirabile</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Baglioni</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Giorgi</surname>
<given-names>R.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>Raman Spectroscopy and Surface Enhanced Raman Scattering (SERS) for the Analysis of Blue and Black Writing Inks: Identification of Dye Content and Degradation Processes</article-title>. <source>Front. Chem.</source> <volume>7</volume>, <fpage>727</fpage>. <pub-id pub-id-type="doi">10.3389/fchem.2019.00727</pub-id> </citation>
</ref>
<ref id="B72">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>SenGupta</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Chadha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2014</year>). <article-title>Probing of Different Conformations of Piperazine Using Raman Spectroscopy</article-title>. <source>Chem. Phys.</source> <volume>436-437</volume>, <fpage>55</fpage>&#x2013;<lpage>62</lpage>. <pub-id pub-id-type="doi">10.1016/j.chemphys.2014.03.011</pub-id> </citation>
</ref>
<ref id="B73">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Siqueira</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Lyra</surname>
<given-names>M. L.</given-names>
</name>
<name>
<surname>Ramos</surname>
<given-names>T. N.</given-names>
</name>
<name>
<surname>Champagne</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Manzoni</surname>
<given-names>V.</given-names>
</name>
</person-group> (<year>2022</year>). <article-title>Unveiling the Relationship between Structural and Polarization Effects on the First Hyperpolarizability of a Merocyanine Dye</article-title>. <source>J. Chem. Phys.</source> <volume>156</volume>, <fpage>014305</fpage>. <pub-id pub-id-type="doi">10.1063/5.0076490</pub-id> </citation>
</ref>
<ref id="B74">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Steiner</surname>
<given-names>U.</given-names>
</name>
<name>
<surname>Abdel-Kader</surname>
<given-names>M. H.</given-names>
</name>
<name>
<surname>Fischer</surname>
<given-names>P.</given-names>
</name>
<name>
<surname>Kramer</surname>
<given-names>H. E. A.</given-names>
</name>
</person-group> (<year>1978</year>). <article-title>Photochemical Cis/trans Isomerization of a Stilbazolium Betaine. A Protolytic/photochemical Reaction Cycle</article-title>. <source>J. Am. Chem. Soc.</source> <volume>100</volume>, <fpage>3190</fpage>&#x2013;<lpage>3197</lpage>. <pub-id pub-id-type="doi">10.1021/ja00478a039</pub-id> </citation>
</ref>
<ref id="B75">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Szaniawska</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Kudelski</surname>
<given-names>A.</given-names>
</name>
</person-group> (<year>2021</year>). <article-title>Applications of Surface-Enhanced Raman Scattering in Biochemical and Medical Analysis</article-title>. <source>Front. Chem.</source> <volume>9</volume>, <fpage>664134</fpage>. <pub-id pub-id-type="doi">10.3389/fchem.2021.664134</pub-id> </citation>
</ref>
<ref id="B76">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Thomas</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Biswas</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Venkateswaran</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>D&#x2019;Cunha</surname>
<given-names>R.</given-names>
</name>
<name>
<surname>Mukherjee</surname>
<given-names>T.</given-names>
</name>
</person-group> (<year>2005</year>). <article-title>Raman, Infrared, SERS and DFT Calculations of a Triazole Derivative (Akacid)</article-title>. <source>Chem. Phys. Lett.</source> <volume>402</volume>, <fpage>361</fpage>&#x2013;<lpage>366</lpage>. <pub-id pub-id-type="doi">10.1016/j.cplett.2004.12.064</pub-id> </citation>
</ref>
<ref id="B77">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Thomas</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Biswas</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Malkar</surname>
<given-names>V. V.</given-names>
</name>
<name>
<surname>Mukherjee</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2010</year>). <article-title>Studies on Adsorption of Carnosine on Silver Nanoparticles by SERS</article-title>. <source>Chem. Phys. Lett.</source> <volume>491</volume>, <fpage>59</fpage>&#x2013;<lpage>64</lpage>. <pub-id pub-id-type="doi">10.1016/j.cplett.2010.03.059</pub-id> </citation>
</ref>
<ref id="B78">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Thomas</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Maiti</surname>
<given-names>N.</given-names>
</name>
<name>
<surname>Mukherjee</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Kapoor</surname>
<given-names>S.</given-names>
</name>
</person-group> (<year>2013</year>). <article-title>Investigation on the Adsorption Characteristics of Anserine on the Surface of Colloidal Silver Nanoparticles</article-title>. <source>Spectrochim. Acta Part A Mol. Biomol. Spectrosc.</source> <volume>112</volume>, <fpage>27</fpage>&#x2013;<lpage>32</lpage>. <pub-id pub-id-type="doi">10.1016/j.saa.2013.04.047</pub-id> </citation>
</ref>
<ref id="B79">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Tsukada</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Mineo</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Itoh</surname>
<given-names>K.</given-names>
</name>
</person-group> (<year>1989</year>). <article-title>Resonace Raman and Surface-Enhanced Resonance Raman Scattering Study on the Structure of a Merocyanine Dye, 4-(2-(4-Hydroxyphenyl)ethenyl)-1-Methylpyridinium</article-title>. <source>J. Phys. Chem.</source> <volume>93</volume>, <fpage>7989</fpage>&#x2013;<lpage>7992</lpage>. <pub-id pub-id-type="doi">10.1021/j100361a008</pub-id> </citation>
</ref>
<ref id="B80">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Walter</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Moseler</surname>
<given-names>M.</given-names>
</name>
</person-group> (<year>2020</year>). <article-title>Ab Initio Wavelength-Dependent Raman Spectra: Placzek Approximation and beyond</article-title>. <source>J. Chem. Theory Comput.</source> <volume>16</volume>, <fpage>576</fpage>&#x2013;<lpage>586</lpage>. <pub-id pub-id-type="doi">10.1021/acs.jctc.9b00584</pub-id> </citation>
</ref>
<ref id="B81">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wang</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Wen</surname>
<given-names>G.</given-names>
</name>
<name>
<surname>Ye</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Liang</surname>
<given-names>A.</given-names>
</name>
<name>
<surname>Jiang</surname>
<given-names>Z.</given-names>
</name>
</person-group> (<year>2016</year>). <article-title>Label-free SERS Study of Galvanic Replacement Reaction on Silver Nanorod Surface and its Application to Detect Trace Mercury Ion</article-title>. <source>Sci. Rep.</source> <volume>6</volume>, <fpage>19650</fpage>. <pub-id pub-id-type="doi">10.1038/srep19650</pub-id> </citation>
</ref>
<ref id="B82">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Willets</surname>
<given-names>K. A.</given-names>
</name>
<name>
<surname>Van Duyne</surname>
<given-names>R. P.</given-names>
</name>
</person-group> (<year>2007</year>). <article-title>Localized Surface Plasmon Resonance Spectroscopy and Sensing</article-title>. <source>Annu. Rev. Phys. Chem.</source> <volume>58</volume>, <fpage>267</fpage>&#x2013;<lpage>297</lpage>. <pub-id pub-id-type="doi">10.1146/annurev.physchem.58.032806.104607</pub-id> </citation>
</ref>
<ref id="B83">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Wu</surname>
<given-names>D.-Y.</given-names>
</name>
<name>
<surname>Li</surname>
<given-names>J.-F.</given-names>
</name>
<name>
<surname>Ren</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Tian</surname>
<given-names>Z.-Q.</given-names>
</name>
</person-group> (<year>2008</year>). <article-title>Electrochemical Surface-Enhanced Raman Spectroscopy of Nanostructures</article-title>. <source>Chem. Soc. Rev.</source> <volume>37</volume>, <fpage>1025</fpage>&#x2013;<lpage>1041</lpage>. <pub-id pub-id-type="doi">10.1039/b707872m</pub-id> </citation>
</ref>
<ref id="B84">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>W&#xfc;rthner</surname>
<given-names>F.</given-names>
</name>
<name>
<surname>Yao</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Debaerdemaeker</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Wortmann</surname>
<given-names>R.</given-names>
</name>
</person-group> (<year>2002</year>). <article-title>Dimerization of Merocyanine Dyes. Structural and Energetic Characterization of Dipolar Dye Aggregates and Implications for Nonlinear Optical Materials</article-title>. <source>J. Am. Chem. Soc.</source> <volume>124</volume>, <fpage>9431</fpage>&#x2013;<lpage>9447</lpage>. <pub-id pub-id-type="doi">10.1021/ja020168f</pub-id> </citation>
</ref>
<ref id="B85">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Yang</surname>
<given-names>B.</given-names>
</name>
<name>
<surname>Jin</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Guo</surname>
<given-names>S.</given-names>
</name>
<name>
<surname>Park</surname>
<given-names>Y.</given-names>
</name>
<name>
<surname>Chen</surname>
<given-names>L.</given-names>
</name>
<name>
<surname>Zhao</surname>
<given-names>B.</given-names>
</name>
<etal/>
</person-group> (<year>2019</year>). <article-title>Recent Development of SERS Technology: Semiconductor-Based Study</article-title>. <source>ACS Omega</source> <volume>4</volume>, <fpage>20101</fpage>&#x2013;<lpage>20108</lpage>. <pub-id pub-id-type="doi">10.1021/acsomega.9b03154</pub-id> </citation>
</ref>
<ref id="B86">
<citation citation-type="journal">
<person-group person-group-type="author">
<name>
<surname>Zong</surname>
<given-names>C.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>M.</given-names>
</name>
<name>
<surname>Xu</surname>
<given-names>L.-J.</given-names>
</name>
<name>
<surname>Wei</surname>
<given-names>T.</given-names>
</name>
<name>
<surname>Ma</surname>
<given-names>X.</given-names>
</name>
<name>
<surname>Zheng</surname>
<given-names>X.-S.</given-names>
</name>
<etal/>
</person-group> (<year>2018</year>). <article-title>Surface-Enhanced Raman Spectroscopy for Bioanalysis: Reliability and Challenges</article-title>. <source>Chem. Rev.</source> <volume>118</volume>, <fpage>4946</fpage>&#x2013;<lpage>4980</lpage>. <pub-id pub-id-type="doi">10.1021/acs.chemrev.7b00668</pub-id> </citation>
</ref>
</ref-list>
</back>
</article>