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<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Ecol. Evol.</journal-id>
<journal-title>Frontiers in Ecology and Evolution</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Ecol. Evol.</abbrev-journal-title>
<issn pub-type="epub">2296-701X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fevo.2020.565708</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Ecology and Evolution</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Climate Vulnerability Assessment of the <italic>Espeletia</italic> Complex on P&#x00E1;ramo Sky Islands in the Northern Andes</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Valencia</surname> <given-names>Jhon B.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/634929/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Mesa</surname> <given-names>Jeison</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/988461/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Le&#x00F3;n</surname> <given-names>Juan G.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Madri&#x00F1;&#x00E1;n</surname> <given-names>Santiago</given-names></name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<xref ref-type="aff" rid="aff5"><sup>5</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/95452/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Cort&#x00E9;s</surname> <given-names>Andr&#x00E9;s J.</given-names></name>
<xref ref-type="aff" rid="aff6"><sup>6</sup></xref>
<xref ref-type="aff" rid="aff7"><sup>7</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/96357/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Facultad de Ingenier&#x00ED;a y Administraci&#x00F3;n, Universidad Nacional de Colombia</institution>, <addr-line>Palmira</addr-line>, <country>Colombia</country></aff>
<aff id="aff2"><sup>2</sup><institution>The Alliance of Bioversity International and the International Center for Tropical Agriculture (CIAT)</institution>, <addr-line>Rome</addr-line>, <country>Italy</country></aff>
<aff id="aff3"><sup>3</sup><institution>Escuela de Estad&#x00ED;stica, Facultad de Ingenier&#x00ED;a, Universidad del Valle</institution>, <addr-line>Cali</addr-line>, <country>Colombia</country></aff>
<aff id="aff4"><sup>4</sup><institution>Departamento de Ciencias Biol&#x00F3;gicas, Universidad de los Andes</institution>, <addr-line>Bogot&#x00E1;</addr-line>, <country>Colombia</country></aff>
<aff id="aff5"><sup>5</sup><institution>Jard&#x00ED;n Bot&#x00E1;nico de Cartagena &#x201C;Guillermo Pi&#x00F1;eres&#x201D;</institution>, <addr-line>Turbaco</addr-line>, <country>Colombia</country></aff>
<aff id="aff6"><sup>6</sup><institution>Corporaci&#x00F3;n Colombiana de Investigaci&#x00F3;n Agropecuaria AGROSAVIA, C.I. La Selva</institution>, <addr-line>Rionegro</addr-line>, <country>Colombia</country></aff>
<aff id="aff7"><sup>7</sup><institution>Departamento de Ciencias Forestales, Facultad de Ciencias Agrarias, Universidad Nacional de Colombia &#x2013; Sede Medell&#x00ED;n</institution>, <addr-line>Medell&#x00ED;n</addr-line>, <country>Colombia</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Domenico Gargano, University of Calabria, Italy</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Rodolfo Gentili, University of Milano-Bicocca, Italy; Mauro Fois, University of Cagliari, Italy</p></fn>
<corresp id="c001">&#x002A;Correspondence: Andr&#x00E9;s J. Cort&#x00E9;s, <email>acortes@agrosavia.co</email></corresp>
<fn fn-type="other" id="fn002"><p><sup>&#x2020;</sup>These authors share senior authorship</p></fn>
<fn fn-type="other" id="fn004"><p>This article was submitted to Biogeography and Macroecology, a section of the journal Frontiers in Ecology and Evolution</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>24</day>
<month>09</month>
<year>2020</year>
</pub-date>
<pub-date pub-type="collection">
<year>2020</year>
</pub-date>
<volume>8</volume>
<elocation-id>565708</elocation-id>
<history>
<date date-type="received">
<day>26</day>
<month>05</month>
<year>2020</year>
</date>
<date date-type="accepted">
<day>26</day>
<month>08</month>
<year>2020</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2020 Valencia, Mesa, Le&#x00F3;n, Madri&#x00F1;&#x00E1;n and Cort&#x00E9;s.</copyright-statement>
<copyright-year>2020</copyright-year>
<copyright-holder>Valencia, Mesa, Le&#x00F3;n, Madri&#x00F1;&#x00E1;n and Cort&#x00E9;s</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Some of the largest impacts of climate change are expected in the environmentally heterogeneous and species rich high mountain ecosystems. Among those, the Neotropical alpine grassland above the tree line (c. 2,800 m), known as P&#x00E1;ramo, is the fastest evolving biodiversity hotspot on earth, and one of the most threatened. Yet, predicting climate responses of typically slow-growing, long-lived plant linages in this unique high mountain ecosystem remains challenging. Here we coupled climate sensitivity modeling and adaptive potential inferences to efficiently assess climate vulnerability of <italic>Espeletia</italic>, P&#x00E1;ramo&#x2019;s most iconic, predominant and rapidly evolving plant complex. In order to estimate climate sensitivity, we first modeled the distribution of 28 <italic>Espeletia</italic> taxa under a niche conservatism scenario using altitude and five current (1970&#x2013;2000) and future (2050 RCP 8.5) bioclimatic variables across 36 different P&#x00E1;ramo complexes in the northern Andes (49% of the world&#x2019;s P&#x00E1;ramo area). As an alternative to range shifts via migration, we also computed the adaptive capacity of these P&#x00E1;ramo complexes by considering three enhancing factors of the biodiversity&#x2019;s adaptive potential as well as three environmental limiting factors of the populations&#x2019; plastic response. These predictors showed that diverse P&#x00E1;ramos in the Eastern Cordillera were more vulnerable likely because the counteracting effects of the adaptive potential (<italic>r</italic> = &#x2212;0.93 &#x00B1; 0.01) were not sufficient to buffer higher distribution losses (<italic>r</italic> = 0.39 &#x00B1; 0.01). Agriculture (<italic>r</italic> = &#x2212;0.48 &#x00B1; 0.01), mining (<italic>r</italic> = &#x2212;0.36 &#x00B1; 0.01), and rural population density (<italic>r</italic> = &#x2212;0.23 &#x00B1; 0.01) also weakened the adaptive capacity. These results speak for a limited persistence via migration in the short-term responses of <italic>Espeletia</italic> to climate change, even though the past population dynamics in concert with glacial cycling is indicative of a predominant role of range shifts. Furthermore, changing climate, together with a general inability to adapt, may eventually constrain the rapid diversification in the <italic>Espeletia</italic> complex. Our integrative modeling illustrates how future climate may impact plant populations in a mega diverse and highly threatened ecosystem such as the P&#x00E1;ramo, and encourages carrying out similar estimates in diverse plant complexes across other high mountain and island-like ecosystems.</p>
</abstract>
<kwd-group>
<kwd>Neotropical alpine region</kwd>
<kwd>biodiversity hotspots</kwd>
<kwd>species distribution modeling</kwd>
<kwd>niche conservatism</kwd>
<kwd>range shifts</kwd>
<kwd>adaptation</kwd>
<kwd>Espeletiinae Cuatrec. (Asteraceae)</kwd>
</kwd-group>
<counts>
<fig-count count="5"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="208"/>
<page-count count="18"/>
<word-count count="0"/>
</counts>
</article-meta>
</front>
<body>
<sec id="S1">
<title>Introduction</title>
<p>How tropical alpine biodiversity hotspots are affected and will react to climate change is among the most pressing questions in current biological research. Most studies on responses to changing climate assume populations migration to higher altitudes so that organisms would track their ecological niche (<xref ref-type="bibr" rid="B101">Lenoir et al., 2008</xref>; <xref ref-type="bibr" rid="B177">Steinbauer et al., 2018</xref>), and in some cases even to lower altitudes due to competitive release (<xref ref-type="bibr" rid="B100">Lenoir et al., 2010</xref>). Yet, when migration potential is restricted (<xref ref-type="bibr" rid="B90">Jump and Penuelas, 2005</xref>; <xref ref-type="bibr" rid="B97">Lees et al., 2020</xref>), the only way left for organisms to persist is by adjusting to the new environmental conditions, a traditionally neglected alternative in niche modeling. Adjustment via phenotypic plasticity is presumably important in long-lived taxa because plastic responses can happen within the lifetime of an individual (<xref ref-type="bibr" rid="B133">Nicotra et al., 2010</xref>). However, plasticity may be hampered when populations face novel anthropic conditions not found in their evolutionary history (<xref ref-type="bibr" rid="B68">Fox et al., 2019</xref>; <xref ref-type="bibr" rid="B92">Kelly, 2019</xref>), e.g., agriculture, mining and population density. Organisms can also adjust to climate change through adaptation (<xref ref-type="bibr" rid="B192">Waldvogel et al., 2020</xref>). Still, populations may not have enough adaptive potential (<italic>e.g.</italic> limited diversity) to keep up with the pace of climate change (<xref ref-type="bibr" rid="B82">Hoffmann and Sgro, 2011</xref>). Therefore, assessing biodiversity hotspots&#x2019; vulnerability to climate change not only requires tracing ecological niche gaps under future scenarios &#x2013; i.e., sensitivity (<xref ref-type="bibr" rid="B7">Berry et al., 2003</xref>), but also needs to explicitly account for the adaptive potential (<xref ref-type="bibr" rid="B161">Razgour et al., 2019</xref>) and plasticity to anthropic pressures. These improvements may make predictions more congruent with empirical data, even in potential climate refugia (<xref ref-type="bibr" rid="B178">Sweet et al., 2019</xref>).</p>
<p>One of the fastest evolving biodiversity hotspots is the P&#x00E1;ramo (<xref ref-type="bibr" rid="B114">Madri&#x00F1;&#x00E1;n et al., 2013</xref>), a highly threated (<xref ref-type="bibr" rid="B190">V&#x00E1;squez et al., 2015</xref>; <xref ref-type="bibr" rid="B148">P&#x00E9;rez-Escobar et al., 2018</xref>) alpine ecosystem dominated by diverse grasslands above the treeline in the American tropics (at elevations of ca. 2,800&#x2013;5,000 m). It is a main water supplier of wetland ecosystems and densely populated areas in the northern Andes (<xref ref-type="bibr" rid="B46">Cuesta et al., 2019a</xref>; <xref ref-type="bibr" rid="B106">Llamb&#x00ED; et al., 2020</xref>). Despite it has a relatively small surface area (35,000 km<sup>2</sup>), it contains over 3,000 plant species, several of which are endemic (<xref ref-type="bibr" rid="B113">Luteyn, 1999</xref>; <xref ref-type="bibr" rid="B87">Hughes and Atchison, 2015</xref>) and emerged as unique adaptations to extreme environments that evolved during the Andean uplift in the last five million years (<xref ref-type="bibr" rid="B2">Antonelli et al., 2009</xref>; <xref ref-type="bibr" rid="B114">Madri&#x00F1;&#x00E1;n et al., 2013</xref>; <xref ref-type="bibr" rid="B128">Mutke et al., 2014</xref>). Unparalleled diversification rates across plant groups at these tropical &#x201C;sky islands&#x201D; (<xref ref-type="bibr" rid="B175">Sklen&#x00E1;&#x00F8; et al., 2014</xref>) has further been attributed to colonization by pre-adapted linages (<xref ref-type="bibr" rid="B127">Muellner-Riehl, 2019</xref>), and Pleistocene glacial cycling (<xref ref-type="bibr" rid="B132">Nevado et al., 2018</xref>; <xref ref-type="bibr" rid="B149">Perrigo et al., 2019</xref>; <xref ref-type="bibr" rid="B156">Rahbek et al., 2019</xref>) in the last 2.4 Myr that led to repeated periods of connectivity and spatial isolation (i.e., &#x201C;species pump hypothesis&#x201D;). Population fluctuations in concert with past glacial cycling indicate a general inability to adapt and a major role of range shifts (<xref ref-type="bibr" rid="B117">Mart&#x00ED;n-Bravo et al., 2010</xref>; <xref ref-type="bibr" rid="B165">Ronikier, 2011</xref>; <xref ref-type="bibr" rid="B78">Hazzi et al., 2018</xref>; <xref ref-type="bibr" rid="B127">Muellner-Riehl, 2019</xref>). Yet, it remains to be explored whether the rapidly evolving P&#x00E1;ramo can keep pace with the quick rate of climate change and human expansion.</p>
<p>The most iconic, abundant and diverse group in the P&#x00E1;ramo is the <italic>Espeletia</italic> complex (<xref ref-type="bibr" rid="B124">Monasterio and Sarmiento, 1991</xref>; <xref ref-type="bibr" rid="B114">Madri&#x00F1;&#x00E1;n et al., 2013</xref>; <xref ref-type="bibr" rid="B120">Mav&#x00E1;rez, 2019b</xref>). It originated in the Venezuelan Andes (<xref ref-type="bibr" rid="B155">Pouchon et al., 2018</xref>) from where it colonized southwards the Colombian Eastern Cordillera and the Ecuadorian Andes (<xref ref-type="bibr" rid="B120">Mav&#x00E1;rez, 2019b</xref>), followed by a northwards migration into the Colombian Central and Western Cordilleras (<xref ref-type="bibr" rid="B45">Cuatrecasas, 2013</xref>). <italic>Espeletia</italic> taxa (ca. 120) are ecologically abundant across the P&#x00E1;ramo landscape (<xref ref-type="bibr" rid="B113">Luteyn, 1999</xref>), occurring in highly heterogeneous habitats. <italic>Espeletia</italic> populations are adapted to grow in the wet depressions of high valleys, in the dry exposed slopes or even within the forests at the tree line, therefore experiencing a wide range of climatic conditions within elevations and localities (<xref ref-type="bibr" rid="B150">Peyre et al., 2018</xref>). This environmental heterogeneity may have important implications for the reaction of <italic>Espeletia</italic> to changing climatic conditions. For example, habitat variation may provide suitable locations for migrants within only a few meters of their current locations (<xref ref-type="bibr" rid="B168">Scherrer and K&#x00F6;rner, 2011</xref>). However, populations adapted to a narrow range of conditions may respond poorly to future threats. In other words, environmental heterogeneity effects on the responses to climate change may be mixed, and sometime contradictory, especially for a long living tropical alpine plant with limited seed dispersal, such as <italic>Espeletia</italic>. Hence, a much-needed research is to balance climate sensitivity under the current ecological niche heterogeneity with the adaptive capacity of <italic>Espeletia</italic> to assess the climate vulnerability of this plant complex.</p>
<p>In order to bridge this gap, our goals in this study were to (1) quantify climate sensitivity in the <italic>Espeletia</italic> complex by comparing current and future (2050 RCP 8.5) distributions under a niche conservatism scenario (i.e., range shift via migration), (2) compute the adaptive capacity by incorporating enhancing factors of the biodiversity&#x2019;s adaptive potential (i.e., diversity, protected areas, and forest area in the buffer zone of the P&#x00E1;ramo) as well as limiting factors of the plastic response (i.e., agricultural area, mining, and population density), and (3) estimate climate vulnerability of <italic>Espeletia</italic> by simultaneously coupling its climate sensitivity with its adaptive capacity. This work will help establishing how plant populations may respond to environmental change in a mega diverse tropical alpine region, where the largest impacts of climate pressures are expected (<xref ref-type="bibr" rid="B94">K&#x00F6;rner, 2003</xref>; <xref ref-type="bibr" rid="B166">Rumpf et al., 2018</xref>).</p>
</sec>
<sec id="S2" sec-type="materials|methods">
<title>Materials and Methods</title>
<sec id="S2.SS1">
<title>Study Area</title>
<p>The study area comprised the Colombian Andean P&#x00E1;ramo biogeographical province (2,732&#x2013;5,212 m, <xref ref-type="fig" rid="F1">Figure 1</xref>), including the high-elevation northern Andes and the Sierra Nevada de Santa Marta, but excluding areas with similar altitudes in the Cordillera de Merida and Central American mountains (<xref ref-type="fig" rid="F2">Figure 2</xref>). It was delimited in the north by the Sierra Nevada of Santa Marta (11&#x00B0;N), and in the south by the Colombia-Ecuador border (1 N). It spanned 36 P&#x00E1;ramo complexes, as in <xref ref-type="bibr" rid="B125">Morales et al. (2007)</xref> and <xref ref-type="bibr" rid="B111">Londo&#x00F1;o et al. (2014)</xref>, denoting 49% of the world&#x2019;s P&#x00E1;ramos. The surveyed P&#x00E1;ramo zones were covered in a 33% by protected areas<sup><xref ref-type="fn" rid="footnote1">1</xref></sup>, and surrounded in a 30% by forest patches<sup><xref ref-type="fn" rid="footnote2">2</xref></sup>. Meanwhile, agriculture and mining, respectively, disturbed 6 and 7%<sup><xref ref-type="fn" rid="footnote3">3</xref></sup> of these P&#x00E1;ramos and their buffer belt (2 km around the tree line). The handling of these data sources is detailed below as part of the computation of the &#x201C;Adaptive Capacity at the Study Area.&#x201D;</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption><p>Altitudinal profile (m asl) of 28 <italic>Espeletia</italic> taxa across P&#x00E1;ramo sky islands in the Colombian Andes. A total of 1,432 occurrences, originally gathered as georeferenced specimen data from GBIF, were retained after cleaning for georeferencing consistency (i.e., non-redundant records located within the study area) and number of records per species (to avoid distributions with less than 10 points, following <xref ref-type="bibr" rid="B187">Van Proosdij et al. (2016)</xref> for narrow-ranged species). <italic>Espeletia</italic> taxonomy is in accordance with <xref ref-type="bibr" rid="B45">Cuatrecasas (2013)</xref>.</p></caption>
<graphic xlink:href="fevo-08-565708-g001.tif"/>
</fig>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption><p>Climate sensitivity estimates of <italic>Espeletia</italic> across 36 P&#x00E1;ramo complexes in the Colombian Andes. Climate sensitivity was modeled by comparing <bold>(A)</bold> current (baseline period 1970&#x2013;2000) and <bold>(B)</bold> future (2050 RCP 8.5) average distribution probabilities across 28 taxa, as obtained with Maxent <italic>v.</italic>3.4.1 (<xref ref-type="bibr" rid="B154">Phillips et al., 2017</xref>) under a niche conservatism scenario (i.e., range shift via migration). Values close to zero in the sensitivity index <bold>(C)</bold> indicate few changes in the forecasted distribution of <italic>Espeletia</italic> due to climate change, while negative and positive values correspond to range losses and gains, respectively, based on the averaged presence probabilities. Five non-collinear WorldClim bioclimatic variables (<xref ref-type="supplementary-material" rid="TS3">Supplementary Table S3</xref>) were considered at a 30 s (1 km<sup>2</sup>) spatial resolution for the current and future scenarios, besides a Digital Elevation Model (DEM). <italic>Espeletia</italic> taxonomy follows <xref ref-type="bibr" rid="B45">Cuatrecasas (2013)</xref>. P&#x00E1;ramo complexes are numbered in <bold>(A)</bold> according to <xref ref-type="bibr" rid="B125">Morales et al. (2007)</xref> and <xref ref-type="bibr" rid="B111">Londo&#x00F1;o et al. (2014)</xref>, specifically: (1) Perij&#x00E1;, (2) Jurisdicciones-Santurb&#x00E1;n, (3) Tam&#x00E1;, (4) Almorzadero, (5) Yarigu&#x00ED;es, (6) Cocuy, (7) Pisba, (8) Tota-Bijagual-Mamapacha, (9) Guantiva-Rusia, (10) Iguaque-Merch&#x00E1;n, (11) Guerrero, (12) Rabanal y r&#x00ED;o Bogot&#x00E1;, (13) Chingaza, (14) Cruz Verde-Sumapaz, (15) Los Picachos, (16) Miraflores, (17) Belmira, (18) Nevados, (19) Chil&#x00ED;-Barrag&#x00E1;n, (20) Las Hermosas, (21) Nevado del Huila-Moras, (22) Guanacas-Purac&#x00E9;-Coconuco, (23) Sotar&#x00E1;, (24) Do&#x00F1;a Juana-Chimayoy, (25) La Cocha-Patascoy, (26) Chiles-Cumbal, (27) Paramillo, (28) Frontino-Urrao, (29) Citar&#x00E1;, (30) Tatam&#x00E1;, (31) Duende, (32) Farallones de Cali, (33) Cerro Plateado, (34) Santa Marta, (35) Sons&#x00F3;n, and (36) Altiplano Cundiboyacense.</p></caption>
<graphic xlink:href="fevo-08-565708-g002.tif"/>
</fig>
</sec>
<sec id="S2.SS2">
<title>Climate Sensitivity in the <italic>Espeletia</italic> Complex</title>
<p>Climate sensitivity in the <italic>Espeletia</italic> complex was modeled by comparing current and future (2050 RCP 8.5) distributions under a niche conservatism scenario (i.e., range shift via migration). Occurrences of <italic>Espeletia</italic> samples for the 36 Colombian P&#x00E1;ramo complexes were downloaded as georeferenced specimen data from providers served by GBIF<sup><xref ref-type="fn" rid="footnote4">4</xref></sup>. From an initial set of 15,466 specimen records downloaded, a total of 1,432 (<xref ref-type="supplementary-material" rid="TS1">Supplementary Table S1</xref>), comprising 28 different <italic>Espeletia</italic> taxa according to <xref ref-type="bibr" rid="B45">Cuatrecasas (2013)</xref> &#x2013; <xref ref-type="supplementary-material" rid="TS2">Supplementary Table S2</xref>, were retained after filtering for georeferencing consistency (i.e., non-redundant records within the study area) and number of records. In order to avoid bias due to distributions with low number of input points (<xref ref-type="bibr" rid="B200">Wisz et al., 2008</xref>), specially for presumably rare taxa (<xref ref-type="bibr" rid="B67">Fois et al., 2018</xref>), only putative species with at least 10 original records were retained (three taxa with more than 100 records, <xref ref-type="supplementary-material" rid="FS1">Supplementary Figure S1A</xref>). This threshold follows <xref ref-type="bibr" rid="B187">Van Proosdij et al. (2016)</xref> recommendation for narrow-ranged species, that is those with a moderate prevalence class (i.e., 27 taxa were present in less than seven different P&#x00E1;ramo complexes, and only one taxon was present in 20 P&#x00E1;ramos, <xref ref-type="supplementary-material" rid="FS1">Supplementary Figure S1B</xref>). This latter trend is expected in <italic>Espeletia</italic> species, for which distance (<xref ref-type="bibr" rid="B50">Diazgranados and Barber, 2017</xref>; <xref ref-type="bibr" rid="B142">Padilla-Gonz&#x00E1;lez et al., 2017</xref>) and ecology (<xref ref-type="bibr" rid="B37">Cort&#x00E9;s et al., 2018a</xref>) are the major speciation drivers.</p>
<p>Historical climate data was extracted from the WorldClim<sup><xref ref-type="fn" rid="footnote5">5</xref></sup> database, at a 30 s resolution, using the georeferencing of each record. All 19 bioclimatic variables were downloaded in the baseline period 1970&#x2013;2000. The same variables projected to 2050, under the IPCC RCP 8.5 scenario, were gathered using CCAFS&#x2019;s downscaled delta method (<xref ref-type="bibr" rid="B131">Navarro-Racines et al., 2020</xref>). This projection averages 33 different global climatic models at a 1 km<sup>2</sup> resolution. A Digital Elevation Model (DEM) variable was further included. Prioritization of environmental variables (<xref ref-type="bibr" rid="B207">Zeng et al., 2016</xref>) is crucial to enhance model complexity (<xref ref-type="bibr" rid="B194">Warren and Seifert, 2011</xref>) for climate sensitivity assessments. By improving variable selection (<xref ref-type="bibr" rid="B27">Cobos et al., 2019</xref>), collinearity (<xref ref-type="bibr" rid="B62">Feng et al., 2019</xref>) and sampling bias (<xref ref-type="bibr" rid="B179">Syfert et al., 2013</xref>) can be minimized. Collinearity in particular refers to a strong correlation between two or more predictor variables, and may cause instability in parameter estimation (<xref ref-type="bibr" rid="B56">Dormann et al., 2013</xref>). A measure to diagnose collinearity is the Variance Inflation Factor (VIF), the square of the multiple correlation coefficient resulting from regressing a predictor variable against all other predictor variables (<xref ref-type="bibr" rid="B24">Chatterjee and Hadi, 2006</xref>). Hence, we performed variable selection by computing the VIF score using the <italic>usdm</italic> (Uncertainty Analysis for Species Distribution Models) package (<xref ref-type="bibr" rid="B130">Naimi et al., 2014</xref>) in R <italic>v.</italic>3.3.1 (R Core Team), and drew Pairwise Pearson correlations (<italic>r</italic>) among all variables by means of the same software (<xref ref-type="supplementary-material" rid="FS2">Supplementary Figure S2</xref>). Five bioclimatic variables and DEM did not exhibit collinearity (<xref ref-type="bibr" rid="B130">Naimi et al., 2014</xref>) at VIF &#x003C; 10 (<xref ref-type="supplementary-material" rid="TS3">Supplementary Table S3</xref>), with absolute <italic>r</italic>-values below 0.7 from 0.05 to 0.65, and therefore were retained hereinafter.</p>
<p>The six non-collinear variables fed Maxent model <italic>v.</italic>3.4.1. (<xref ref-type="bibr" rid="B154">Phillips et al., 2017</xref>), a &#x201C;machine learning&#x201D; outline that uses maximum entropy and Bayesian inference to estimate occurrence probability distributions. Ten split-sample models were run, after checking for stabilization in the ROC curves (<xref ref-type="bibr" rid="B176">Spiers et al., 2018</xref>), with an average of 10 k pseudo-absences for each of the 28 putative taxa. Each replicated run type was set to &#x201C;cross-validate&#x201D; with 500 iterations (<xref ref-type="bibr" rid="B15">Buffum et al., 2015</xref>). Presence &#x2265; 95% was binary reclassified (<xref ref-type="bibr" rid="B105">Liu et al., 2005</xref>) and the average across repetitions was recorded in each case. This procedure was performed for the historical dataset (1970&#x2013;2000). To predict distribution changes of <italic>Espeletia</italic>, we projected trained models on current presence localities and present background climate to 2050 under the RCP 8.5 scenario through Maxent&#x2019;s &#x201C;projection layer&#x201D; tool. Current model validation considered AUC, an aggregate measure of performance across all possible classification thresholds. Minimum average testing AUC was above 0.98 (<xref ref-type="supplementary-material" rid="TS4">Supplementary Table S4</xref>). As AUC alone (<xref ref-type="supplementary-material" rid="TS5">Supplementary Table S5</xref>) may be deceiving (<xref ref-type="bibr" rid="B109">Lobo et al., 2008</xref>; <xref ref-type="bibr" rid="B196">West et al., 2016</xref>), the AIC and BIC criteria were also computed and checked for consistency (<xref ref-type="supplementary-material" rid="TS6">Supplementary Table S6</xref>).</p>
<p>All 56 distribution maps were converted to binary data, using a threshold of the 20th percentile, as suggested by the Maxent <italic>v.</italic>3.4.1 software (<xref ref-type="bibr" rid="B154">Phillips et al., 2017</xref>). These maps were then averaged to generate spatial information of current and future presence probabilities across all 28 taxa. Finally, the current distribution map was subtracted to the one obtained under a climate change scenario in order to estimate climate sensitivity in the <italic>Espeletia</italic> complex. Values close to zero in the sensitivity index meant few changes in the forecasted distribution of <italic>Espeletia</italic> due to climatic variation. On the other hand, negative and positive values corresponded to areas where the presence probabilities were, respectively, diminished or boosted by climate change.</p>
</sec>
<sec id="S2.SS3">
<title>Adaptive Capacity at the Study Area</title>
<p>We computed the adaptive capacity as the scaled additive effects of six main variables that expressed the capacity of the overall <italic>Espeletia</italic> biodiversity to respond without migration to the effects of climate change. Enhancing factors of the biodiversity&#x2019;s adaptive potential were diversity, protected areas, and forest area around the P&#x00E1;ramo. On the contrary, limiting factors of the plastic response were agriculture, mining, and population density.</p>
<p>Diversity may buffer the effects of climate change by enriching complex interactions, such as adaptive inter-specific introgression (<xref ref-type="bibr" rid="B115">Marques et al., 2019</xref>) and hybrid speciation (<xref ref-type="bibr" rid="B43">Coyne and Orr, 2004</xref>; <xref ref-type="bibr" rid="B1">Abbott et al., 2013</xref>; <xref ref-type="bibr" rid="B146">Payseur and Rieseberg, 2016</xref>). Hybridization may allow for local adaptation in transitional environments and bi-directional transfer of adaptive variation through introgression (<xref ref-type="bibr" rid="B88">Isabel et al., 2020</xref>). <italic>Espeletia</italic> in particular exhibits weak species boundaries, rampant gene-flow and reticulate evolution (<xref ref-type="bibr" rid="B37">Cort&#x00E9;s et al., 2018a</xref>; <xref ref-type="bibr" rid="B155">Pouchon et al., 2018</xref>), leading to a high incidence of natural hybrids (<xref ref-type="bibr" rid="B160">Rauscher, 2002</xref>; <xref ref-type="bibr" rid="B45">Cuatrecasas, 2013</xref>). In order to account for the enhancing role of diversity on the adaptive potential, the number of <italic>Espeletia</italic> taxa was totalized in a 1 km grid using the occurrence data downloaded from GBIF (see footnote), as described in the previous section, and scaled from 0 to 1.</p>
<p>Another enhancing factor of the biodiversity&#x2019;s adaptive potential is protected areas, where human intervention does not represent a direct threat, allowing biodiversity to be conserved while naturally coping with climate change. Protected areas selected for this analysis spanned 1,050 natural areas, according to the System of National Natural Parks (see footnote), and included 43 National Natural Parks, 663 Civil Society Reserves, 54 Regional Natural Parks, and 57 National Protected Forest Reserves. These categories were, respectively, rated as 1, 0.3, 0.1, and 0.1, following <xref ref-type="bibr" rid="B26">CIAT (2017)</xref>. Higher ratings were assigned to areas that presumably provide greater protection for biodiversity due to their low anthropogenic pressure and extent.</p>
<p>Forest patches around the P&#x00E1;ramo complexes (<xref ref-type="bibr" rid="B80">Henao-D&#x00ED;az, 2019</xref>) may also contribute buffering climate change effects by facilitating (<xref ref-type="bibr" rid="B14">Bueno and Llamb&#x00ED;, 2015</xref>) migration and gene-flow, which could increase the frequency of existing genetic variants adapted to particular conditions (<xref ref-type="bibr" rid="B12">Bridle and Vines, 2007</xref>). Additionally, forests provide conditions that may favor thermal and water regulation, decreasing the magnitude of climate change itself. Therefore, forest area in the buffer zone of the P&#x00E1;ramo (2 km around the tree line) was gathered from the IDEAM (see footnote), and converted to binary points (1 = presence) in a 1 km grid.</p>
<p>On the other hand, major limiting factors of the plastic response are agriculture (<xref ref-type="bibr" rid="B5">Avellaneda-Torres et al., 2020</xref>), mining (<xref ref-type="bibr" rid="B148">P&#x00E9;rez-Escobar et al., 2018</xref>) and population density within the study area and in its buffer zone (<xref ref-type="bibr" rid="B190">V&#x00E1;squez et al., 2015</xref>). In order to account for these threats, agricultural and mining areas were downloaded from the Geographic Institute Agust&#x00ED;n Codazzi (see footnote) for the period 2010&#x2013;2012, and transformed to binary data (0 = presence) in a 1 km grid within the study area and in its buffer zone (2 km around the tree line). The population density indicator was computed as the inverse value of the normalized rural population density, scaled from 0 to 1, so that 1 meant absence of human settlements and 0 was the population density at the most populated rural zones in the study area. The population information was gathered from data projected to 2015 by the National Administrative Department of Statistics<sup><xref ref-type="fn" rid="footnote6">6</xref></sup>.</p>
</sec>
<sec id="S2.SS4">
<title>Climate Vulnerability Index for <italic>Espeletia</italic></title>
<p>In order to estimate climate vulnerability at the overall <italic>Espeletia</italic> complex, we simultaneously coupled its climate sensitivity with its adaptive capacity. Negative values of the sensitivity index meant areas where the presence probabilities of <italic>Espeletia</italic> were diminished due to climate change. Meanwhile, lower adaptive capacity scores spoke for a prominent role of limiting factors of the plastic response (i.e., agriculture, mining, and population density) as compared to enhancing drivers of the biodiversity&#x2019;s adaptive potential (i.e., diversity, protected areas, and forest area around the P&#x00E1;ramo). Therefore, the climate vulnerability score was computed as the complement value of the additive contributions of the sensitivity and the adaptive capacity indices. The climate vulnerability score was scaled from 0 to 1 for comparative purposes. Pairwise Pearson correlations (<italic>r</italic>) among all estimated scores were computed, and boxplots and ridgeline plots were drawn for the three indices in all 36 P&#x00E1;ramo complexes. Computing and plotting were done in R <italic>v.</italic>3.3.1 (R Core Team).</p>
</sec>
</sec>
<sec id="S3">
<title>Results</title>
<sec id="S3.SS1">
<title>Climate Sensitivity of <italic>Espeletia</italic> Varied Widely Across P&#x00E1;ramo Complexes</title>
<p>Climate sensitivity was estimated across all 36 Colombian P&#x00E1;ramo complexes by comparing current (baseline period 1970&#x2013;2000, <xref ref-type="fig" rid="F2">Figure 2A</xref>) and future (2050 RCP 8.5, <xref ref-type="fig" rid="F2">Figure 2B</xref>) average distribution probabilities of 28 different <italic>Espeletia</italic> taxa (nine had average sensitivity scores below zero). Values surrounding zero in the sensitivity index (&#x2212;0.029 to 0.030, 42% of the study area, <xref ref-type="fig" rid="F2">Figure 2C</xref>) stood for few changes in the forecasted distribution of <italic>Espeletia</italic> due to climate change, and were predominant in the north of the Eastern Cordillera, the Cruz Verde-Sumapaz P&#x00E1;ramo complex south of the Bogot&#x00E1; montane savanna (the southwestern wetland complex of the larger Eastern Cordillera&#x2019;s Andean highland plateau), and the small sky islands of the Western Cordillera.</p>
<p>Given a niche conservatism scenario, negative estimates of the climate sensitivity (&#x2264;&#x2212;0.030, 32% of the study area, <xref ref-type="fig" rid="F2">Figure 2C</xref>) predicted range losses based on the averaged presence probabilities. P&#x00E1;ramo areas more likely to experience range losses were those in the Sierra Nevada de Santa Marta, and the Central Cordillera South of Las Hermosas (i.e., Nevado del Huila-Moras, and Guanacas-Purac&#x00E9;-Coconuco), as well as those in the northern corner of the Eastern Cordillera (i.e., Sierra Nevada del Cocuy, Pisba, and Tota-Bijagual-Mamapacha), where diverse summits surrounded the topographically intricate Chichamocha inter-Andean canyon. On the other hand, range shifts via migration enriched presence probabilities in other localities (positive estimates of the climate sensitivity &#x2265; 0.031, 27% of the study area, <xref ref-type="fig" rid="F2">Figure 2C</xref>). Range gains were only predicted for P&#x00E1;ramo areas in the Central Cordillera (Los Nevados, Chil&#x00ED;-Barrag&#x00E1;n, Las Hermosas, and La Cocha-Patascoy, <xref ref-type="supplementary-material" rid="FS3">Supplementary Figure S3</xref>) where the dominant taxon was <italic>E. hartwegiana</italic>, as well as in the summits of the northern tip of the Eastern Cordillera (Perij&#x00E1;).</p>
</sec>
<sec id="S3.SS2">
<title>Adaptive Capacity Was Jeopardized Across Most P&#x00E1;ramo Complexes</title>
<p>The adaptive capacity across 36 Colombian P&#x00E1;ramo complexes was computed using a scaled additive model of enhancing (<xref ref-type="fig" rid="F3">Figures 3A&#x2013;C</xref>) and limiting (<xref ref-type="fig" rid="F3">Figures 3D&#x2013;F</xref>) factors of the biodiversity&#x2019;s adaptive potential and the plastic response. The adaptive capacity index (<xref ref-type="fig" rid="F4">Figures 4B</xref>, <xref ref-type="fig" rid="F5">5A</xref>, <xref ref-type="supplementary-material" rid="FS3">Supplementary Figure S3A</xref>, and <xref ref-type="supplementary-material" rid="TS7">Supplementary Table S7</xref>) was higher (&#x2265;0.72, 34% of the study area) in species-rich P&#x00E1;ramo areas (Pearson&#x2019;s <italic>r</italic> = 0.19 &#x00B1; 0.01, <xref ref-type="fig" rid="F3">Figure 3A</xref> and <xref ref-type="supplementary-material" rid="FS4">Supplementary Figure S4</xref>), and matched extensive National Natural Parks (<italic>r</italic> = 0.59 &#x00B1; 0.01, <xref ref-type="fig" rid="F3">Figure 3B</xref> and <xref ref-type="supplementary-material" rid="FS4">Supplementary Figure S4</xref>), like the Eastern Cordillera&#x2019;s Sierra Nevada del Cocuy, Chingaza and Sumapaz. The P&#x00E1;ramo adaptive capacity index was also moderately superior (0.62&#x2013;0.71, 29% of the study area, <xref ref-type="fig" rid="F4">Figure 4B</xref>) in the most representative National Natural Parks in the Central Cordillera (Los Nevados and Nevado del Huila) as well as in the Sierra Nevada de Santa Marta. In turn, the western slopes of the P&#x00E1;ramo complexes at the Eastern and Central Cordilleras exhibited lower adaptive capacity values (&#x2264;0.61, 37% of the study area), and were enclosed by less forest patches (30% on average, <xref ref-type="fig" rid="F3">Figure 3C</xref>, <italic>r</italic> = 0.39 &#x00B1; 0.01, <xref ref-type="supplementary-material" rid="FS4">Supplementary Figure S4</xref>).</p>
<fig id="F3" position="float">
<label>FIGURE 3</label>
<caption><p>Components of the adaptive capacity across 36 P&#x00E1;ramo complexes in the Colombian Andes. Enhancing <bold>(A&#x2013;C)</bold> and limiting <bold>(D&#x2013;F)</bold> factors of the adaptive capacity are shown in green and red, respectively. Enhancing factors of the biodiversity&#x2019;s adaptive potential were <bold>(A)</bold> diversity, <bold>(B)</bold> protected areas, and <bold>(C)</bold> forest area around the P&#x00E1;ramo, while limiting factors of the plastic response were <bold>(D)</bold> agriculture, <bold>(E)</bold> mining and <bold>(F)</bold> population density. Diversity <bold>(A)</bold>, which is the number of <italic>Espeletia</italic> taxa totalized in a 1 km grid based on the occurrence data downloaded from GBIF, and the inverse value of the normalized rural population density <bold>(F)</bold> were scaled from 0 to 1. A total of 1,050 protected areas <bold>(B)</bold> were rated as 1, 0.3, 0.1, and 0.1 for National Natural Parks, Civil Society Reserves, Regional Natural Parks and National Protected Forest Reserves, respectively, following (<xref ref-type="bibr" rid="B26">CIAT, 2017</xref>). Forest patches <bold>(C)</bold> around the P&#x00E1;ramo complexes (2 km around the tree line, 1 km grid) were recorded as presence points (1 = presence), while agriculture <bold>(D)</bold> and mining <bold>(E)</bold> for the period 2010&#x2013;2012 were marked as null data points (0 = presence) within the study area and in its buffer zone (2 km around the tree line, 1 km grid). P&#x00E1;ramo complexes numbers in <bold>(A)</bold> follow <xref ref-type="bibr" rid="B125">Morales et al. (2007)</xref> and <xref ref-type="bibr" rid="B111">Londo&#x00F1;o et al. (2014)</xref>: (1) Perij&#x00E1;, (2) Jurisdicciones-Santurb&#x00E1;n, (3) Tam&#x00E1;, (4) Almorzadero, (5) Yarigu&#x00ED;es, (6) Cocuy, (7) Pisba, (8) Tota-Bijagual-Mamapacha, (9) Guantiva-Rusia, (10) Iguaque-Merch&#x00E1;n, (11) Guerrero, (12) Rabanal y r&#x00ED;o Bogot&#x00E1;, (13) Chingaza, (14) Cruz Verde-Sumapaz, (15) Los Picachos, (16) Miraflores, (17) Belmira, (18) Nevados, (19) Chil&#x00ED;-Barrag&#x00E1;n, (20) Las Hermosas, (21) Nevado del Huila-Moras, (22) Guanacas-Purac&#x00E9;-Coconuco, (23) Sotar&#x00E1;, (24) Do&#x00F1;a Juana-Chimayoy, (25) La Cocha-Patascoy, (26) Chiles-Cumbal, (27) Paramillo, (28) Frontino-Urrao, (29) Citar&#x00E1;, (30) Tatam&#x00E1;, (31) Duende, (32) Farallones de Cali, (33) Cerro Plateado, (34) Santa Marta, (35) Sons&#x00F3;n, and (36) Altiplano Cundiboyacense.</p></caption>
<graphic xlink:href="fevo-08-565708-g003.tif"/>
</fig>
<fig id="F4" position="float">
<label>FIGURE 4</label>
<caption><p>Climate sensitivity, adaptive capacity and climate vulnerability in the <italic>Espeletia</italic> complex across 36 P&#x00E1;ramo sky island complexes in the Colombian Andes. Climate sensitivity <bold>(A)</bold> is already depicted in <xref ref-type="fig" rid="F2">Figure 2C</xref> and is brought here for comparative purposes. Adaptive capacity <bold>(B)</bold> was computed as the scaled additive effects of all six variables shown in <xref ref-type="fig" rid="F3">Figure 3</xref>. Climate vulnerability <bold>(C)</bold> was calculated as the complement value of the additive contributions of the sensitivity and the adaptive capacity indices, scaled from 0 to 1. Negative values in the sensitivity index <bold>(A)</bold> suggest range losses in the presence probabilities of <italic>Espeletia</italic> due to climate change. Low values in the adaptive capacity score <bold>(B)</bold> indicate a major role of limiting factors of the plastic response (i.e., agriculture, mining, and population density, <xref ref-type="fig" rid="F3">Figures 3D&#x2013;F</xref>) as compared to enhancing drivers of the biodiversity&#x2019;s adaptive potential (i.e., diversity, protected areas, and forest area around the P&#x00E1;ramo, <xref ref-type="fig" rid="F3">Figures 3A&#x2013;C</xref>). P&#x00E1;ramo complexes are numbered in <bold>(A)</bold> following <xref ref-type="bibr" rid="B125">Morales et al. (2007)</xref> and <xref ref-type="bibr" rid="B111">Londo&#x00F1;o et al. (2014)</xref>, that is: (1) Perij&#x00E1;, (2) Jurisdicciones-Santurb&#x00E1;n, (3) Tam&#x00E1;, (4) Almorzadero, (5) Yarigu&#x00ED;es, (6) Cocuy, (7) Pisba, (8) Tota-Bijagual-Mamapacha, (9) Guantiva-Rusia, (10) Iguaque-Merch&#x00E1;n, (11) Guerrero, (12) Rabanal y r&#x00ED;o Bogot&#x00E1;, (13) Chingaza, (14) Cruz Verde-Sumapaz, (15) Los Picachos, (16) Miraflores, (17) Belmira, (18) Nevados, (19) Chil&#x00ED;-Barrag&#x00E1;n, (20) Las Hermosas, (21) Nevado del Huila-Moras, (22) Guanacas-Purac&#x00E9;-Coconuco, (23) Sotar&#x00E1;, (24) Do&#x00F1;a Juana-Chimayoy, (25) La Cocha-Patascoy, (26) Chiles-Cumbal, (27) Paramillo, (28) Frontino-Urrao, (29) Citar&#x00E1;, (30) Tatam&#x00E1;, (31) Duende, (32) Farallones de Cali, (33) Cerro Plateado, (34) Santa Marta, (35) Sons&#x00F3;n, and (36) Altiplano Cundiboyacense.</p></caption>
<graphic xlink:href="fevo-08-565708-g004.tif"/>
</fig>
<fig id="F5" position="float">
<label>FIGURE 5</label>
<caption><p>Boxplots for the adaptive capacity <bold>(A)</bold>, climate sensitivity <bold>(B)</bold>, and vulnerability <bold>(C)</bold> across 36 P&#x00E1;ramo complexes in the Colombian Andes. For comparative purposes, P&#x00E1;ramo complexes are sorted in <bold>(A)</bold> from those with a low adaptive potential to anthropic pressures according to the enhancing and limiting factors depicted in <xref ref-type="fig" rid="F3">Figure 3</xref>, in <bold>(B)</bold> from those likely to experience a range loss (distributions below zero) to those predicted to exhibit a range gain (distributions above zero) by 2050 (under RCP 8.5), while in <bold>(C)</bold> P&#x00E1;ramo complexes at the top are the most vulnerable. Boxplots summarize grid estimates depicted in <xref ref-type="fig" rid="F4">Figure 4</xref>.</p></caption>
<graphic xlink:href="fevo-08-565708-g005.tif"/>
</fig>
<p>However, positive effects due to protected areas and forest coverage on the adaptive potential were offset by limiting factors of the plastic response, primarily agricultural (6% of the study area and its buffer zone, <xref ref-type="fig" rid="F3">Figure 3D</xref>, <italic>r</italic> = &#x2212;0.47 &#x00B1; 0.01, <xref ref-type="supplementary-material" rid="FS4">Supplementary Figure S4</xref>) and mining (7% of the study area and its buffer zone, <xref ref-type="fig" rid="F3">Figure 3E</xref>, <italic>r</italic> = &#x2212;0.41 &#x00B1; 0.01, <xref ref-type="supplementary-material" rid="FS4">Supplementary Figure S4</xref>) pressures, mainly in the western slopes of the P&#x00E1;ramo areas at the Eastern and Central Cordilleras. This let to the lowest adaptive potential estimates (&#x2264;0.52, 20% of the study area, <xref ref-type="fig" rid="F4">Figure 4B</xref>) at the western slopes of the P&#x00E1;ramo complexes in the Cauca province, in the Central Cordillera, and the Boyac&#x00E1; and Santander provinces (i.e., Almorzadero and Altiplano Cundiboyacense P&#x00E1;ramo complexes), in the Eastern Cordillera. Rural population (<xref ref-type="fig" rid="F3">Figure 3F</xref>) hampered the adaptive potential in all three Cordilleras and P&#x00E1;ramo areas (<italic>r</italic> = &#x2212;0.28 &#x00B1; 0.01, <xref ref-type="supplementary-material" rid="FS4">Supplementary Figure S4</xref>).</p>
</sec>
<sec id="S3.SS3">
<title>Diverse P&#x00E1;ramos in the Eastern Cordillera Were More Vulnerable</title>
<p>The scaled complement of the additive contributions of the sensitivity (<xref ref-type="fig" rid="F2">Figures 2C</xref>, <xref ref-type="fig" rid="F5">5B</xref> and <xref ref-type="supplementary-material" rid="FS3">Supplementary Figure S3B</xref>) and the adaptive capacity (<xref ref-type="fig" rid="F4">Figure 4B</xref>) indices were used to compute the climate vulnerability score (<xref ref-type="fig" rid="F4">Figures 4C</xref>, <xref ref-type="fig" rid="F5">5C</xref> and <xref ref-type="supplementary-material" rid="FS3">Supplementary Figure S3C</xref>). The most vulnerable (&#x2265;0.57, 11% of the study area, <xref ref-type="fig" rid="F4">Figure 4C</xref>) P&#x00E1;ramo areas coincided with diverse P&#x00E1;ramos in the Eastern Cordillera (<xref ref-type="fig" rid="F3">Figure 3A</xref>) because of more distribution losses (<italic>r</italic> = 0.39 &#x00B1; 0.01, <xref ref-type="supplementary-material" rid="FS4">Supplementary Figure S4</xref>). Agriculture (<italic>r</italic> = 0.48 &#x00B1; 0.01, <xref ref-type="supplementary-material" rid="FS4">Supplementary Figure S4</xref>), mining (<italic>r</italic> = 0.36 &#x00B1; 0.01, <xref ref-type="supplementary-material" rid="FS4">Supplementary Figure S4</xref>) and rural population density (<italic>r</italic> = 0.23 &#x00B1; 0.01, <xref ref-type="supplementary-material" rid="FS4">Supplementary Figure S4</xref>) also boosted their vulnerability, mainly on the western slopes in the middle of the Central Cordillera (i.e., Guanacas-Purac&#x00E9;-Coconuco), and the northeast corner of the Eastern Cordillera (i.e., Almorzadero, Pisba, and Altiplano Cundiboyacense). On the other hand, the less vulnerable (&#x2264;0.38, 57% of the study area, <xref ref-type="fig" rid="F4">Figure 4C</xref>) P&#x00E1;ramo areas were those with the highest adaptive capacity (&#x2265; 0.72, <xref ref-type="fig" rid="F4">Figure 4B</xref>, <italic>r</italic> = &#x2212;0.93 &#x00B1; 0.01, <xref ref-type="supplementary-material" rid="FS4">Supplementary Figure S4</xref>) due to large National Natural Parks (Sumapaz, Chingaza, Sierra Nevada del Cocuy, <xref ref-type="fig" rid="F3">Figure 3B</xref>), as well as those for which predicted range shifts were neutral (&#x2212;0.029 to 0.030, <xref ref-type="fig" rid="F4">Figure 4A</xref>, i.e., the Cruz Verde-Sumapaz P&#x00E1;ramo complexes in the Eastern Cordillera) or positive (&#x2265;0.031, <xref ref-type="fig" rid="F5">Figure 5B</xref>, Los Nevados, Chil&#x00ED;-Barrag&#x00E1;n, and Las Hermosas in Central Cordillera).</p>
</sec>
</sec>
<sec id="S4">
<title>Discussion</title>
<p>The climate sensitivity score of <italic>Espeletia</italic> to climate change indicated range losses (negative values) widespread across most P&#x00E1;ramo complexes. This suggests limited persistence of the <italic>Espeletia</italic> spp. populations via migration in the majority of P&#x00E1;ramos, with some exceptions in the Central Cordillera possibly due to its higher connectivity. An alternative for populations to persist despite changing environments would be adaptation <italic>s.l.</italic> However, positive effects on the adaptive potential, like those due to protected areas and forests, are likely to be offset by limiting factors of the plastic response, such as rising agriculture and mining in the P&#x00E1;ramo areas and their surroundings. Overall, this suggests that diverse P&#x00E1;ramo areas of the Eastern Cordillera are the most vulnerable to changing climate. Climate change pushing <italic>Espeletia</italic> toward mountain summits where there is nowhere else to go (<xref ref-type="bibr" rid="B46">Cuesta et al., 2019a</xref>), together with a general inability of those populations to adapt, might constrain the rapid diversification that has made the <italic>Espeletia</italic> complex so unique.</p>
<sec id="S4.SS1">
<title>Range Losses in the <italic>Espeletia</italic> Complex Will Widespread Throughout Most P&#x00E1;ramos</title>
<p>Widespread range losses in the distribution of <italic>Espeletia</italic> are expected by 2050, a pessimistic prediction in line with previous modeling efforts (<xref ref-type="bibr" rid="B17">Buytaert et al., 2011</xref>; <xref ref-type="bibr" rid="B44">Crandall et al., 2013</xref>; <xref ref-type="bibr" rid="B121">Mav&#x00E1;rez et al., 2018</xref>; <xref ref-type="bibr" rid="B81">Helmer et al., 2019</xref>; <xref ref-type="bibr" rid="B153">Peyre et al., 2020</xref>; <xref ref-type="bibr" rid="B204">Young and Duchicela, 2020</xref>). This tendency is broadly defined as thermophilization, a progressive decline of cold mountain habitats and their biota (<xref ref-type="bibr" rid="B76">Gottfried et al., 2012</xref>). Large reductions in modeled area and important upward shifts in the distribution of 28 Espeletiinae are already predicted by 2070 at the Venezuelan P&#x00E1;ramo (<xref ref-type="bibr" rid="B121">Mav&#x00E1;rez et al., 2018</xref>). Despite our projection is carried out for a shorter time frame at another, wider, study area (Colombian Andes spanning the Eastern, Central and Western Cordilleras besides Sierra Nevada de Santa Marta), overall results point toward the same trend and are complementary. Similar predictions of climate sensitivity at the P&#x00E1;ramo complexes of the Ecuadorian Cordilleras (1 sp.) were not considered as part of this study because of the difficulties in compiling and comparing data from different national repositories, specifically for some of the variables that compose the adaptive capacity score (i.e., agriculture and mining pressures). Yet, considering analogous approaches in the Ecuadorian P&#x00E1;ramo (<xref ref-type="bibr" rid="B44">Crandall et al., 2013</xref>; <xref ref-type="bibr" rid="B81">Helmer et al., 2019</xref>; <xref ref-type="bibr" rid="B153">Peyre et al., 2020</xref>) is essential to gather a more comprehensive understating on the consequences of climate change at high Andean ecosystems north of the Huancabamba depression, a major biogeographical barrier for high-elevation plant taxa (<xref ref-type="bibr" rid="B195">Weigend, 2002</xref>).</p>
<p>There are two important exceptions for the widespread range losses in the distribution of <italic>Espeletia</italic> in the Colombian Andes. First, small and fragmented P&#x00E1;ramo sky islands in the Western Cordillera exhibit neutral climate sensitivity, a counterintuitive projection that <xref ref-type="bibr" rid="B121">Mav&#x00E1;rez et al. (2018)</xref> also pointed out for Espeletiinae in isolated P&#x00E1;ramo areas at Cordillera de M&#x00E9;rida. This reiterative finding suggests that scarce topographical complexity (terrain ruggedness) in recently colonized small islands (<xref ref-type="bibr" rid="B64">Flantua et al., 2019</xref>) may have favored habitat generalists, while intricate local-scale environmental heterogeneity at larger P&#x00E1;ramo complexes could have triggered an explosive radiation (<xref ref-type="bibr" rid="B37">Cort&#x00E9;s et al., 2018a</xref>; <xref ref-type="bibr" rid="B129">Naciri and Linder, 2020</xref>) of habitat specialists, each with a narrow ecological niche for migration to occur (<xref ref-type="bibr" rid="B47">Cuesta et al., 2019b</xref>). Modern colonization and limited topographical complexity, together with higher connectivity, may also account for the second exception, which is that range gains are only predicted for P&#x00E1;ramo areas in the Central Cordillera (Los Nevados, Chil&#x00ED;-Barrag&#x00E1;n, Las Hermosas, and La Cocha-Patascoy), where the dominant taxon is <italic>E. hartwegiana</italic>. In line with this, P&#x00E1;ramo areas more likely to exhibit range losses are those in the topographically complex Eastern Cordillera&#x2019;s northeast corner, where diverse (<xref ref-type="bibr" rid="B113">Luteyn, 1999</xref>; <xref ref-type="bibr" rid="B45">Cuatrecasas, 2013</xref>; <xref ref-type="bibr" rid="B152">Peyre et al., 2015,2019</xref>) summits surround the deep (1,100 m) Chichamocha inter-Andean canyon.</p>
<p>Range shifts presuppose niche conservatism, but also depend on the intrinsic dispersal ability of the taxa (<xref ref-type="bibr" rid="B147">Pelayo et al., 2019</xref>; <xref ref-type="bibr" rid="B183">Tovar et al., 2020</xref>). In organisms with limited seed dispersal such as <italic>Espeletia</italic>, other ways for migration are key (<xref ref-type="bibr" rid="B28">Cochrane et al., 2019</xref>). For instance, migration via sporadic pollen flow would not be as constrained as seed dispersal (<xref ref-type="bibr" rid="B45">Cuatrecasas, 2013</xref>). Alternately, hybrids with intermediate niche requirements (<xref ref-type="bibr" rid="B162">Rieseberg, 2003</xref>) may serve as bridges for migration in a plant complex with rampant natural introgression (<xref ref-type="bibr" rid="B160">Rauscher, 2002</xref>; <xref ref-type="bibr" rid="B37">Cort&#x00E9;s et al., 2018a</xref>; <xref ref-type="bibr" rid="B155">Pouchon et al., 2018</xref>). Finally, sporadic episodes of habitat connectivity (<xref ref-type="bibr" rid="B64">Flantua et al., 2019</xref>) in the lifespan of a long-lived organism such as <italic>Espeletia</italic> (<xref ref-type="bibr" rid="B45">Cuatrecasas, 2013</xref>) could provide a window for migration across modern barriers.</p>
<p>Key traits may relax the niche conservatism assumption by conferring the ability to colonize new habitats. For instance, underground plant-soil interactions (<xref ref-type="bibr" rid="B74">Goh et al., 2013</xref>; <xref ref-type="bibr" rid="B170">Sedlacek et al., 2014</xref>; <xref ref-type="bibr" rid="B104">Little et al., 2016</xref>) across different water levels (<xref ref-type="bibr" rid="B72">Geange et al., 2017</xref>) and cellular-anatomical physiological adaptations (<xref ref-type="bibr" rid="B167">Sandoval et al., 2019</xref>) may serve as pre-adaptations for a wider range expansion (<xref ref-type="bibr" rid="B48">Cuesta et al., 2017</xref>). Plastic traits may also broad the spectrum of novel climates (<xref ref-type="bibr" rid="B3">Arnold et al., 2019</xref>). Coupling this modeling with eco-physiological studies in <italic>Espeletia</italic> (<xref ref-type="bibr" rid="B102">Leon-Garcia and Lasso, 2019</xref>; <xref ref-type="bibr" rid="B108">Llamb&#x00ED; and Rada, 2019</xref>) is hence a key research line to better track future range shifts in the P&#x00E1;ramo.</p>
</sec>
<sec id="S4.SS2">
<title>Climate Change May Constrain the Rapid Diversification of the <italic>Espeletia</italic> Complex</title>
<p>The fact that diverse areas in the Eastern Cordillera are vulnerable to climate change is not only counterintuitive, but it also means that the long-term rapid diversification rate, striking in the <italic>Espeletia</italic> complex, could be jeopardized. Diversity is regarded as a buffer of the effects of climate change by enriching interactions (<xref ref-type="bibr" rid="B18">C&#x00E1;ceres et al., 2014</xref>), such as facilitation (<xref ref-type="bibr" rid="B14">Bueno and Llamb&#x00ED;, 2015</xref>; <xref ref-type="bibr" rid="B199">Wheeler et al., 2015</xref>; <xref ref-type="bibr" rid="B107">Llamb&#x00ED; et al., 2018</xref>; <xref ref-type="bibr" rid="B126">Mora et al., 2018</xref>; <xref ref-type="bibr" rid="B191">Venn et al., 2019</xref>), adaptive inter-specific introgression (<xref ref-type="bibr" rid="B169">Schilthuizen et al., 2004</xref>; <xref ref-type="bibr" rid="B173">Seehausen, 2004</xref>) and hybrid speciation (<xref ref-type="bibr" rid="B146">Payseur and Rieseberg, 2016</xref>), of which there is abundant evidence in <italic>Espeletia</italic> (<xref ref-type="bibr" rid="B160">Rauscher, 2002</xref>; <xref ref-type="bibr" rid="B45">Cuatrecasas, 2013</xref>; <xref ref-type="bibr" rid="B37">Cort&#x00E9;s et al., 2018a</xref>; <xref ref-type="bibr" rid="B155">Pouchon et al., 2018</xref>). Yet, these positive effects are offset by distribution losses in sensitive P&#x00E1;ramo localities, besides rising mining, agriculture and population density. These are P&#x00E1;ramo&#x2019;s current major anthropogenic threats (<xref ref-type="bibr" rid="B190">V&#x00E1;squez et al., 2015</xref>; <xref ref-type="bibr" rid="B148">P&#x00E9;rez-Escobar et al., 2018</xref>) primarily in the western slopes of the Eastern and Central Cordilleras.</p>
<p>Permeable species barriers due to pervasive hybridization make the species concept highly debatable within the <italic>Espeletia</italic> complex. Therefore we refrained from emphasizing single-species responses that are likely to be overwhelmed by meta-population dynamics. <xref ref-type="bibr" rid="B155">Pouchon et al. (2018)</xref> suggested that the entire subtribe Espeletiinae requires an in deep taxonomic revision (<xref ref-type="bibr" rid="B120">Mav&#x00E1;rez, 2019b</xref>) because most of Cuatrecasas&#x2019; (2013) species are thought to be paraphyletic. This trend is not unexpected since the available taxonomy greatly relies on potentially plastic morphological and reproductive traits (<xref ref-type="bibr" rid="B122">Mav&#x00E1;rez, 2020</xref>) that are susceptible to be driven by environmental effects, besides the fact that it disregards rampant hybridization (<xref ref-type="bibr" rid="B160">Rauscher, 2002</xref>). Then, a more appropriate scenario for the young rapidly-evolving <italic>Espeletia</italic> complex with weak species boundaries would be that ecotypes in the same locality, despite depicting microhabitat divergence, are capable of sharing through gene flow and introgression adaptive genetic variants (<xref ref-type="bibr" rid="B37">Cort&#x00E9;s et al., 2018a</xref>). Gene swapping because of porosities in the species bounds would imply that (1) the effective size of &#x201C;rare&#x201D; taxa with few records is higher in terms of standing adaptive variation, and (2) concerted climate responses is feasible across lineages within the same P&#x00E1;ramo sky island. Inter-mountain exchange is also plausible, as reported in other tropical sky islands (<xref ref-type="bibr" rid="B23">Chala et al., 2020</xref>; <xref ref-type="bibr" rid="B184">Tusiime et al., 2020</xref>).</p>
<p>A possible way forward for populations to persist is the very same driver that is thought to contribute with the unbeatable diversification rate in the P&#x00E1;ramo flora (<xref ref-type="bibr" rid="B114">Madri&#x00F1;&#x00E1;n et al., 2013</xref>) &#x2013; local-scale adaptive variation (<xref ref-type="bibr" rid="B84">Huang et al., 2020</xref>; <xref ref-type="bibr" rid="B182">Todesco et al., 2020</xref>). As part of this study we considered major enhancers and constrainers of the adaptive potential at a regional scale. However, populations may still harbor intrinsic genetic variation naturally selected to cope with environmental differences at the microhabitat level (<xref ref-type="bibr" rid="B157">Ram&#x00ED;rez et al., 2014</xref>). In highly heterogeneous mountainous environments, local-scale environmental effects are known for shaping genetic diversity and generating morphological diversity (<xref ref-type="bibr" rid="B87">Hughes and Atchison, 2015</xref>), which may prove useful in the reaction to climate change within the same locality. There is already compiling evidence of ecological-driven divergence in the radiation of Andean <italic>Espeletia</italic> (<xref ref-type="bibr" rid="B37">Cort&#x00E9;s et al., 2018a</xref>), besides allopatric differentiation and isolation by distance (<xref ref-type="bibr" rid="B50">Diazgranados and Barber, 2017</xref>; <xref ref-type="bibr" rid="B142">Padilla-Gonz&#x00E1;lez et al., 2017</xref>, <xref ref-type="bibr" rid="B143">2018</xref>). Ecological parapatric speciation is a likely consequence of local patterns of environmental variation (<xref ref-type="bibr" rid="B129">Naciri and Linder, 2020</xref>) typically found at the P&#x00E1;ramo ecosystem (<xref ref-type="bibr" rid="B124">Monasterio and Sarmiento, 1991</xref>). For instance, frost is more extreme in the wind-exposed high valley slopes than in the wind-sheltered depressions of those valleys or in the upper boundary of the cloud forest. Soil moisture content, higher in the well-irrigated high valley depressions and in the upper boundary of the cloud forest than in the drier slopes of the valleys, could also contribute to this divergence. It now remains to be explored whether this mosaic of environmental heterogeneity has enforced enough heritable polygenic (<xref ref-type="bibr" rid="B6">Barghi et al., 2020</xref>) phenotypic variation as a pre-adaptation (<xref ref-type="bibr" rid="B137">N&#x00FC;rk et al., 2018</xref>) to the new selective forces imposed by climate change.</p>
<p>One potential caveat of our results precisely concerns data availability at the micro-scale level. Bioclimatic data is reliably modeled throughout the P&#x00E1;ramo range at a 1 km<sup>2</sup> spatial resolution, which unfortunately overlooks micro-environmental drivers of the local-scale genetic adaptation (<xref ref-type="bibr" rid="B49">De La Harpe et al., 2017</xref>; <xref ref-type="bibr" rid="B103">Leroy et al., 2020</xref>). This is of particular importance at mountain/alpine ecosystems (<xref ref-type="bibr" rid="B157">Ram&#x00ED;rez et al., 2014</xref>; <xref ref-type="bibr" rid="B42">Cort&#x00E9;s and Wheeler, 2018</xref>), where microhabitats may serve as refugia (<xref ref-type="bibr" rid="B206">Zellweger et al., 2020</xref>), like across the treeline due to active landform processes (<xref ref-type="bibr" rid="B14">Bueno and Llamb&#x00ED;, 2015</xref>; <xref ref-type="bibr" rid="B4">Arzac et al., 2019</xref>; <xref ref-type="bibr" rid="B73">Gentili et al., 2020</xref>). Populations may rely on specific small-scale habitat attributes that are likely to be overlooked by SDMs (<xref ref-type="bibr" rid="B174">Sinclair et al., 2010</xref>), such as topographic, geomorphic, and edaphic features, as well as the distribution of other taxa &#x2013; e.g., competitors and facilitators (<xref ref-type="bibr" rid="B203">Yackulc et al., 2015</xref>). Due to this, SDMs may exhibit substantial uncertainty (<xref ref-type="bibr" rid="B16">Buisson et al., 2010</xref>) and lack of validation (<xref ref-type="bibr" rid="B11">Botkin et al., 2007</xref>) at local scales. Therefore, niche models could be insensitive to micro-environmental processes, leading to an underestimation of the mechanisms governing populations&#x2019; responses. Even if bioclimatic models aim representing the realized niche, they may then disregard the fundamental niche (<xref ref-type="bibr" rid="B110">Loehle and Leblanc, 1996</xref>). Despite statistical imputation-like approaches such as environmental downscaling have been considered to model climate at a higher resolution for specific P&#x00E1;ramo complexes (<xref ref-type="bibr" rid="B121">Mav&#x00E1;rez et al., 2018</xref>), consistently applying such techniques across cordilleras seems unfeasible because accuracy would be constrained by the accessibility of fine-scale bioclimatic data from regional weather stations. These restraints are likely to be overcome soon by incorporating microclimate into SDMs (<xref ref-type="bibr" rid="B99">Lembrechts et al., 2019</xref>) through mechanistic algorithms (<xref ref-type="bibr" rid="B98">Lembrechts and Lenoir, 2020</xref>) physiological models (<xref ref-type="bibr" rid="B40">Cort&#x00E9;s et al., 2013</xref>; <xref ref-type="bibr" rid="B112">L&#x00F3;pez-Hern&#x00E1;ndez and Cort&#x00E9;s, 2019</xref>), hydrological equations (<xref ref-type="bibr" rid="B164">Rodr&#x00ED;guez-Morales et al., 2019</xref>; <xref ref-type="bibr" rid="B31">Correa et al., 2020</xref>), <italic>in situ</italic> data logging, and remote sensing (<xref ref-type="bibr" rid="B159">Ram&#x00F3;n-Reinozo et al., 2019</xref>; <xref ref-type="bibr" rid="B205">Zellweger et al., 2019</xref>).</p>
<p>Another potential caveat of our inferences relate with data availability across the entire P&#x00E1;ramo area in the northern Andes. Some components of the adaptive capacity score (i.e., protected areas, agriculture, and mining pressures) are downloadable only through national repositories, making standardizations and comparisons across all P&#x00E1;ramo complexes in different countries impractical. Yet, it is worth to clarify that climate sensitivity, adaptation capacity and vulnerability indices are not meant to be absolute scores but rather relative values to compare among P&#x00E1;ramo complexes. In this sense, the power of our inferences to rank P&#x00E1;ramo areas is unlikely limited by the pessimistic predictions of the future climate scenario RCP 8.5, making our vulnerability index robust. Furthermore, our whole integrative analytical pipeline is in line with the most up-to-date approaches to carry out climate change vulnerability assessment (<xref ref-type="bibr" rid="B158">Ramirez-Villegas et al., 2014</xref>; <xref ref-type="bibr" rid="B186">Valladares et al., 2014</xref>; <xref ref-type="bibr" rid="B66">Foden et al., 2018</xref>).</p>
<p>By assessing climate sensitivity and adaptive capacity across P&#x00E1;ramo sky islands, we predicted climate change vulnerability in the rapidly evolving <italic>Espeletia</italic> complex, a syngameon (<xref ref-type="bibr" rid="B20">Cannon and Petit, 2020</xref>) likely shaped by incomplete ecological speciation (<xref ref-type="bibr" rid="B135">Nosil et al., 2009</xref>) and adaptive introgression (<xref ref-type="bibr" rid="B63">Fitzpatrick et al., 2015</xref>; <xref ref-type="bibr" rid="B116">Martin and Jiggins, 2017</xref>). However, in order to gather a more comprehensive view of climate change responses in the high mountain ecosystems of the northern Andes, other diverse and highly abundant plant genera in the P&#x00E1;ramo (<xref ref-type="bibr" rid="B86">Hughes et al., 2013</xref>) should be considered under a similar analytical framework as the described here. Immediate candidates to follow up this approach are <italic>Bartsia</italic> (<xref ref-type="bibr" rid="B185">Uribe-Convers and Tank, 2015</xref>), <italic>Chusquea</italic> (<xref ref-type="bibr" rid="B60">Ely et al., 2019</xref>), <italic>Diplostephium</italic> (<xref ref-type="bibr" rid="B188">Vargas et al., 2017</xref>), <italic>Hypericum</italic> (<xref ref-type="bibr" rid="B138">N&#x00FC;rk et al., 2013</xref>), <italic>Loricaria</italic> (<xref ref-type="bibr" rid="B93">Kolar et al., 2016</xref>), <italic>Lupinus</italic> (<xref ref-type="bibr" rid="B85">Hughes and Eastwood, 2006</xref>; <xref ref-type="bibr" rid="B189">V&#x00E1;squez et al., 2016</xref>; <xref ref-type="bibr" rid="B30">Contreras-Ortiz et al., 2018</xref>), <italic>Oreobolus</italic> (<xref ref-type="bibr" rid="B21">Chac&#x00F3;n et al., 2006</xref>; <xref ref-type="bibr" rid="B75">G&#x00F3;mez-Guti&#x00E9;rrez et al., 2017</xref>), <italic>Puya</italic> (<xref ref-type="bibr" rid="B89">Jabaily and Sytsma, 2013</xref>), and <italic>Senecio</italic> (<xref ref-type="bibr" rid="B58">Duskova et al., 2017</xref>; <xref ref-type="bibr" rid="B193">Walter et al., 2020</xref>). These combined efforts would ultimately reveal whether the fastest evolving biodiversity hotspot on earth, and in general tropical high mountain ecosystems (<xref ref-type="bibr" rid="B79">Hedberg, 1964</xref>; <xref ref-type="bibr" rid="B175">Sklen&#x00E1;&#x00F8; et al., 2014</xref>; <xref ref-type="bibr" rid="B22">Chala et al., 2016</xref>), have a chance to persist under current environmental and anthropogenic threats.</p>
</sec>
</sec>
<sec id="S5">
<title>Perspectives</title>
<p>Besides range shifts (<xref ref-type="bibr" rid="B25">Chen et al., 2011</xref>; <xref ref-type="bibr" rid="B61">Feeley et al., 2011</xref>; <xref ref-type="bibr" rid="B54">Donoghue and Edwards, 2014</xref>; <xref ref-type="bibr" rid="B93">Kolar et al., 2016</xref>; <xref ref-type="bibr" rid="B70">Freeman et al., 2020</xref>) and adaptive responses (<xref ref-type="bibr" rid="B82">Hoffmann and Sgro, 2011</xref>; <xref ref-type="bibr" rid="B69">Franks and Hoffmann, 2012</xref>; <xref ref-type="bibr" rid="B53">Donoghue, 2019</xref>; <xref ref-type="bibr" rid="B140">&#x00D8;rsted et al., 2019</xref>), introgression, hybridization (<xref ref-type="bibr" rid="B95">Lafon-Placette et al., 2016</xref>), and polyploidization (<xref ref-type="bibr" rid="B77">Han et al., 2019</xref>; <xref ref-type="bibr" rid="B118">Mason and Wendel, 2020</xref>; <xref ref-type="bibr" rid="B134">Nieto Feliner et al., 2020</xref>) which have not been explicitly explored in this study, may also provide innovative (<xref ref-type="bibr" rid="B55">Donoghue and Sanderson, 2015</xref>) adaptive sources in plants (<xref ref-type="bibr" rid="B1">Abbott et al., 2013</xref>; <xref ref-type="bibr" rid="B115">Marques et al., 2019</xref>). The <italic>Espeletia</italic> complex is known for a high incidence of natural hybrids as told by phenotypic and genetic markers (<xref ref-type="bibr" rid="B160">Rauscher, 2002</xref>; <xref ref-type="bibr" rid="B155">Pouchon et al., 2018</xref>). Hence, assessing the role of reticulate evolution and adaptive introgression for the <italic>Espeletia</italic> complex to face a changing environment will require sampling of hybrids and their putative parental populations across the P&#x00E1;ramo&#x2019;s current micro-ecological mosaic.</p>
<p>Even though hybrids could occupy intermediate niches, persistence of populations in alpine environments that face climate change is regarded as mostly mediated by local-scale (i.e., microhabitat) variation (<xref ref-type="bibr" rid="B41">Cort&#x00E9;s et al., 2014</xref>; <xref ref-type="bibr" rid="B42">Cort&#x00E9;s and Wheeler, 2018</xref>). For example, environmental heterogeneity may provide new suitable locations for migrants within only a few meters of their current locations (<xref ref-type="bibr" rid="B168">Scherrer and K&#x00F6;rner, 2011</xref>), driving in this way plant responses to warming (<xref ref-type="bibr" rid="B206">Zellweger et al., 2020</xref>). More localized environmental data must then be gathered (<xref ref-type="bibr" rid="B205">Zellweger et al., 2019</xref>), since current climate repositories lack the resolution needed to describe the microhabitat heterogeneity. Topographic and soil properties, often overlooked by climatic models, are presumably key in defining P&#x00E1;ramo&#x2019;s wet and drier microhabitats in the wind-sheltered high valley depressions, and in the more wind-exposed slopes. This local-scale environmental trend has diversity implications for other endemic plant species in the northern Andes (<xref ref-type="bibr" rid="B35">Cort&#x00E9;s et al., 2012a,b</xref>; <xref ref-type="bibr" rid="B10">Blair et al., 2016</xref>). Besides high-resolution environmental data, eco-physiological (<xref ref-type="bibr" rid="B108">Llamb&#x00ED; and Rada, 2019</xref>; <xref ref-type="bibr" rid="B167">Sandoval et al., 2019</xref>) and ecological adaptive traits (e.g., <xref ref-type="bibr" rid="B13">Bruelheide et al., 2018</xref>; <xref ref-type="bibr" rid="B33">Cort&#x00E9;s and Blair, 2018</xref>) must be noted more systematically at local scales in natural surveys and field tests, like reciprocal transplant assays of ecotypes among microhabitats (as in <xref ref-type="bibr" rid="B172">Sedlacek et al., 2015</xref>), and space-by-time substitution trials across altitudes (<xref ref-type="bibr" rid="B48">Cuesta et al., 2017</xref>) and habitats (<xref ref-type="bibr" rid="B198">Wheeler et al., 2014</xref>, <xref ref-type="bibr" rid="B197">2016</xref>). Ultimately, micro-scales keep genetic variance (<xref ref-type="bibr" rid="B34">Cort&#x00E9;s et al., 2011</xref>, <xref ref-type="bibr" rid="B38">2018b</xref>; <xref ref-type="bibr" rid="B71">Galeano et al., 2012</xref>; <xref ref-type="bibr" rid="B91">Kelleher et al., 2012</xref>; <xref ref-type="bibr" rid="B9">Blair et al., 2013</xref>, <xref ref-type="bibr" rid="B8">2018</xref>; <xref ref-type="bibr" rid="B32">Cort&#x00E9;s, 2013</xref>; <xref ref-type="bibr" rid="B202">Wu et al., 2020</xref>), morphological diversity, and adaptive trait variation (<xref ref-type="bibr" rid="B171">Sedlacek et al., 2016</xref>; <xref ref-type="bibr" rid="B141">Pacifici et al., 2017</xref>).</p>
<p>Conservation efforts may also buffer the impact of climate change on P&#x00E1;ramo ecosystems by enhancing their adaptive capacity. Vast areas of P&#x00E1;ramo land now safe from conflict are not being rapidly protected, making them susceptible to deforestation for cattle and agriculture (<xref ref-type="bibr" rid="B5">Avellaneda-Torres et al., 2020</xref>), and illegal logging (<xref ref-type="bibr" rid="B190">V&#x00E1;squez et al., 2015</xref>) and mining (<xref ref-type="bibr" rid="B148">P&#x00E9;rez-Escobar et al., 2018</xref>). Thus, improving the current network of protected areas would help minimizing ongoing threats (<xref ref-type="bibr" rid="B57">Duchicela et al., 2019</xref>), especially in the highly diverse P&#x00E1;ramo complexes of the Eastern Cordillera where putatively new species are still being discovered (<xref ref-type="bibr" rid="B51">Diazgranados and Sanchez, 2017</xref>; <xref ref-type="bibr" rid="B119">Mav&#x00E1;rez, 2019a</xref>). Alongside adoption of mitigation policies, adaptation policies (<xref ref-type="bibr" rid="B59">Elsen et al., 2020</xref>) may help safeguarding P&#x00E1;ramos. Finding more sustainable land uses by empowering local communities and developing ecotourism are then as essential to relieve human impact on tropical-alpine plant diversity in the northern Andes.</p>
<p>Last but not least, extending the modeling approach implemented in this work to other key pressures (e.g., fire, <xref ref-type="bibr" rid="B201">Wu and Porinchu, 2019</xref>; <xref ref-type="bibr" rid="B163">Rivadeneira et al., 2020</xref>; <xref ref-type="bibr" rid="B208">Zomer and Ramsay, 2020</xref>) and plant groups (<xref ref-type="bibr" rid="B113">Luteyn, 1999</xref>) in the P&#x00E1;ramo, as well as to other sky islands around the mountains of the world (<xref ref-type="bibr" rid="B83">Hoorn et al., 2018</xref>; <xref ref-type="bibr" rid="B145">Pausas et al., 2018</xref>; <xref ref-type="bibr" rid="B136">N&#x00FC;rk et al., 2019</xref>; <xref ref-type="bibr" rid="B180">Testolin et al., 2020</xref>), and more broadly to other island-like systems (<xref ref-type="bibr" rid="B144">Papadopoulou and Knowles, 2015</xref>; <xref ref-type="bibr" rid="B96">Lamichhaney et al., 2017</xref>; <xref ref-type="bibr" rid="B19">C&#x00E1;mara-Leret et al., 2020</xref>; <xref ref-type="bibr" rid="B65">Flantua et al., 2020</xref>), will help understanding climate change effects on unrelated taxa experiencing similar evolutionary processes (<xref ref-type="bibr" rid="B29">Condamine et al., 2018</xref>; <xref ref-type="bibr" rid="B39">Cort&#x00E9;s et al., 2020</xref>; <xref ref-type="bibr" rid="B139">N&#x00FC;rk et al., 2020</xref>). Such systems offer natural experiments to assess the role of colonization and adaptation (<xref ref-type="bibr" rid="B52">Ding et al., 2020</xref>; <xref ref-type="bibr" rid="B123">McGee et al., 2020</xref>; <xref ref-type="bibr" rid="B181">Tito et al., 2020</xref>) in the past and ongoing responses to climate change, which undeniably will complement ecological predictive modeling.</p>
</sec>
<sec id="S6">
<title>Data Availability Statement</title>
<p>All datasets generated for this study are included in the article/<xref ref-type="supplementary-material" rid="FS1">Supplementary Material</xref> and in the Dryad repository under <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.5061/dryad.gf1vhhmmp">https://doi.org/10.5061/dryad.gf1vhhmmp</ext-link>. Further inquiries can be directed to the corresponding author.</p>
</sec>
<sec id="S7">
<title>Author Contributions</title>
<p>AC, JV, and SM conceived the study. JV compiled the data. JV and JM analyzed the data with contributions from AC and JL. AC, JV, and SM interpreted the data. AC wrote the manuscript with contributions from JV, and further edits made by the other co-authors. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec id="conf1">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</body>
<back>
<fn-group>
<fn fn-type="financial-disclosure">
<p><bold>Funding.</bold> Grants 4.1-2016-00418 from Vetenskapsr&#x00E5;det (VR) and BS20170036 from Kungliga Vetenskapsakademien (KVA) are thanked for funding AC. The University of California (CA, United States) Conservation Grant, the Wildlife Conservation Society (WCS, NY, United States) and Facultad de Ingenier&#x00ED;a y Administraci&#x00F3;n from Universidad Nacional de Colombia (Palmira, Colombia) are also acknowledged for supporting JV&#x2019;s presentation at ESRI User Conference during 2018 at San Diego (CA, United States). The editorial fund from the Colombian Corporation for Agricultural Research (AGROSAVIA) is thanked for financing this publication.</p>
</fn>
</fn-group>
<ack>
<p>We thank early discussions on <italic>Espeletia</italic> ecological divergence with A. Antonelli, C.D. Bacon, I. Calixto-Bot&#x00ED;a, N. Contreras-Ortiz, I. Jim&#x00E9;nez, J. Mavarez, and M. Pineda. J. Ramirez-Villegas, and C.C. Sosa assistance in the prioritization of bioclimatic variables is recognized. V. Berm&#x00FA;dez, L. Gaona, and A. Salamanca are acknowledged for administrative support. M.J. Torres-Urrego aid while drafting this work is deeply appreciated, too. Some of the analyses and ideas presented in this manuscript were polished thanks to comments from participants of the Facultad de Ingenier&#x00ED;a y Administraci&#x00F3;n (UNAL) FiaInnova Workshop, and the International Center for Tropical Agriculture (CIAT)&#x2019;s Decision &#x0026; Policy Analysis (DAPA) Annual Meeting, respectively, held in November 2018 and April 2019 at Palmira (Colombia). Topic editors and reviewers are also thanked for envisioning a well-timed Research Topic on the &#x201C;Consequences of Climate Change for Plant Biodiversity in High Mountain Ecosystems,&#x201D; and for improving an early version of this manuscript through their thoughtful recommendations.</p>
</ack>
<sec id="S10" sec-type="supplementary material"><title>Supplementary Material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fevo.2020.565708/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fevo.2020.565708/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Data_Sheet_1.PDF" id="FS1" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Figure 1</label>
<caption><p>Frequency distributions of the number of records per taxon <bold>(A)</bold>, and the number of P&#x00E1;ramo complexes <bold>(B)</bold> spanned by each of the 28 <italic>Espeletia</italic> taxa across P&#x00E1;ramo sky islands in the Colombian Andes. Number of records, and number of P&#x00E1;ramo complexes spanned for each taxon are drawn from <xref ref-type="supplementary-material" rid="TS2">Supplementary Table S2</xref>.</p></caption>
</supplementary-material>
<supplementary-material xlink:href="Data_Sheet_2.PDF" id="FS2" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Figure 2</label>
<caption><p>Pairwise Pearson correlation coefficients (<italic>r</italic>) among 19 WorldClim bioclimatic variables (in the baseline period 1970&#x2013;2000), and Digital Elevation Model (DEM) at a 30 s (1 km<sup>2</sup>) spatial resolution. Five bioclimatic variables and DEM did not exhibit collinearity problems (<xref ref-type="supplementary-material" rid="TS3">Supplementary Table S3</xref>) and were retained.</p></caption>
</supplementary-material>
<supplementary-material xlink:href="Data_Sheet_3.PDF" id="FS3" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Figure 3</label>
<caption><p>Ridgeline plots for the adaptive capacity <bold>(A)</bold>, climate sensitivity <bold>(B)</bold>, and vulnerability <bold>(C)</bold> scores across 36 P&#x00E1;ramo complexes in the Colombian Andes. For comparative purposes, P&#x00E1;ramo complexes are sorted in <bold>(A)</bold> from those with a low adaptive potential to anthropic pressures according to the enhancing and limiting factors depicted in <xref ref-type="fig" rid="F3">Figure 3</xref>, in <bold>(B)</bold> from those likely to experience a range loss (distributions below zero) to those predicted to exhibit a range gain (distributions above zero) by 2050 (under RCP 8.5), while in <bold>(C)</bold> P&#x00E1;ramo complexes at the top are the most vulnerable. Ridgeline plots summarize grid estimates shown in <xref ref-type="fig" rid="F4">Figure 4</xref>.</p></caption>
</supplementary-material>
<supplementary-material xlink:href="Data_Sheet_4.PDF" id="FS4" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Figure 4</label>
<caption><p>Pairwise Pearson correlation coefficients (<italic>r</italic>) among climate sensitivity (S), adaptive capacity (AC), climate vulnerability (V) and the components of the adaptive capacity in the <italic>Espeletia</italic> complex across P&#x00E1;ramo sky islands in the Colombian Andes. The adaptive capacity enhancing components were diversity (D), protected areas (PA) and forest area around the P&#x00E1;ramo (F), while its limiting factors were agriculture (A), mining (M) and rural population density (RPD). The area of each of the 36 P&#x00E1;ramo complexes is also considered in hectares (Ha). Correlation estimates and 95% confidence intervals are presented above the diagonal, while below the diagonal circles are colored and sized accordingly. Estimates are gathered from <xref ref-type="supplementary-material" rid="TS7">Supplementary Table S7</xref> and are negatively transformed for agriculture (A), mining (M) and rural population density (RPD) in order to aid interpretation.</p></caption>
</supplementary-material>
<supplementary-material xlink:href="Table_1.XLSX" id="TS1" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Table 1</label>
<caption><p>Occurrence data of 28 <italic>Espeletia</italic> taxa across P&#x00E1;ramo sky islands in the Colombian Andes. Occurrences were gathered as georeferenced specimen data from GBIF. Given a starting set of 15,466 specimen records, a total of 1,432 were kept after cleaning for georeferencing consistency (i.e., non-redundant records located within the study area) and number of records per species (to avoid distributions with less than 10 points, as suggested by <xref ref-type="bibr" rid="B187">Van Proosdij et al. (2016)</xref> for narrow-ranged species). <italic>Espeletia</italic> taxonomy follows <xref ref-type="bibr" rid="B45">Cuatrecasas (2013)</xref>.</p></caption>
</supplementary-material>
<supplementary-material xlink:href="Table_2.XLSX" id="TS2" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Table 2</label>
<caption><p>Number of records for each of the 28 <italic>Espeletia</italic> taxa across P&#x00E1;ramo sky islands in the Colombian Andes, and altitudinal range for each taxon. Number of records, number of P&#x00E1;ramo complexes spanned, and minimum and maximum altitudes for each taxon are gathered from <xref ref-type="supplementary-material" rid="TS1">Supplementary Table S1</xref>.</p></caption>
</supplementary-material>
<supplementary-material xlink:href="Table_3.XLSX" id="TS3" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Table 3</label>
<caption><p>Variance Inflation Factor (VIF) for five non-collinear (VIF &#x003C; 10) WorldClim bioclimatic variables considered for modeling at a 30 s (1 km<sup>2</sup>) spatial resolution for the current and future scenarios, besides a Digital Elevation Model (DEM). Absolute <italic>r</italic>-values ranged from 0.05 (BIO18&#x223C;DEM) to 0.65 (BIO15&#x223C;BIO18).</p></caption>
</supplementary-material>
<supplementary-material xlink:href="Table_4.XLSX" id="TS4" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Table 4</label>
<caption><p>Current model validation based on average Area Under the ROC Curve (AUC) and porcentual contribution of the six non-collinear environmental variables for each of the 28 <italic>Espeletia</italic> taxa. AUC in the training and testing datasets are an aggregate measure of performance across all possible classification thresholds. Pseudo-absences (number of background points) are also averaged for each of the 28 putative taxa. Un-averaged statistics are kept in <xref ref-type="supplementary-material" rid="TS5">Supplementary Table S5</xref>. The six non-collinear variables included five WorldClim bioclimatic variables at a 30 s (1 m<sup>2</sup>) spatial resolution. Environmental variables (<xref ref-type="supplementary-material" rid="TS3">Supplementary Table S3</xref>) are abbreviated as follows: (BIO2) Mean Diurnal Range, (BIO4) Temperature Seasonality, (BIO15) Precipitation Seasonality, (BIO18) Precipitation of Warmest Quarter, (BIO19) Precipitation of Coldest Quarter, and (DEM) Digital Elevation Model.</p></caption>
</supplementary-material>
<supplementary-material xlink:href="Table_5.XLSX" id="TS5" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Table 5</label>
<caption><p>Current model validation based on Area Under the ROC Curve (AUC) and relative contribution of the six non-collinear environmental variables for each of the 10 runs in the 28 <italic>Espeletia</italic> taxa. The following overall summary statistics are kept: optimum training subset, regularized training gains, un-regularized training gains, effective iterations, training AUC, optimum testing subset, test gains, test AUC, AUC standard deviation, pseudo-absences (number of background points), and entropy. The following relative contribution scores are kept for the six environmental variables: contribution, permutation importance, training gain, test gain and AUC without and with only each variable. The six non-collinear environmental variables (<xref ref-type="supplementary-material" rid="TS3">Supplementary Table S3</xref>) included five WorldClim BIO variables at a 30 s (1 km<sup>2</sup>) spatial resolution, and are coded as: (BIO2) Mean Diurnal Range, (BIO4) Temperature Seasonality, (BIO15) Precipitation Seasonality, (BIO18) Precipitation of Warmest Quarter, (BIO19) Precipitation of Coldest Quarter, and (DEM) Digital Elevation Model.</p></caption>
</supplementary-material>
<supplementary-material xlink:href="Table_6.XLSX" id="TS6" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Table 6</label>
<caption><p>Current model validation based on Akaike (AIC) and Bayesian (BIC) Information Criteria per repetition of each of the 28 <italic>Espeletia</italic> taxa. Optimum training and testing subsets are summed under N<sub>TR</sub><sub>+</sub><sub>TS</sub>.</p></caption>
</supplementary-material>
<supplementary-material xlink:href="Table_7.XLSX" id="TS7" mimetype="application/vnd.openxmlformats-officedocument.spreadsheetml.sheet" xmlns:xlink="http://www.w3.org/1999/xlink">
<label>Supplementary Table 7</label>
<caption><p>Climate sensitivity (S), adaptive capacity (AC), and climate vulnerability (V) in the <italic>Espeletia</italic> complex across P&#x00E1;ramo sky islands in the Colombian Andes. The adaptive capacity enhancing components were diversity (D), protected areas (PA) and forest area around the P&#x00E1;ramo (F), while its limiting factors were agriculture (A), mining (M) and rural population density (RPD). Diversity (D), which is the number of <italic>Espeletia</italic> taxa totalized in a 1 km grid based on the occurrence data downloaded from GBIF, and the inverse value of the normalized rural population density (RPD) were scaled from 0 to 1. A total of 1,050 protected areas (PA) were rated as 1, 0.3, 0.1, and 0.1 for National Natural Parks, Civil Society Reserves, Regional Natural Parks and National Protected Forest Reserves, respectively, following (<xref ref-type="bibr" rid="B26">CIAT, 2017</xref>). Forest patches (F) around the P&#x00E1;ramo complexes (2 km around the tree line, 1 km grid) were recorded as presence points (1 = presence), while agriculture (A) and mining (M) for the period 2010&#x2013;2012 were marked as null data points (0 = presence) within the study area and in its buffer zone (2 km around the tree line, 1 km grid). The area of each of the 36 P&#x00E1;ramo complexes is also presented in hectares (Ha), as well as its name and ID number following <xref ref-type="fig" rid="F2">Figure 2A</xref>, <xref ref-type="bibr" rid="B125">Morales et al. (2007)</xref> and <xref ref-type="bibr" rid="B111">Londo&#x00F1;o et al. (2014)</xref>.</p></caption>
</supplementary-material></sec>
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