Frontiers in Genetics | Computational Genomics

Original Research

Published on 18 Sep 2023

KD_ConvNeXt: knowledge distillation-based image classification of lung tumor surgical specimen sections

in Computational Genomics

Zhaoliang Zheng
Henian Yao
Chengchuang Lin
Kaixin Huang
Luoxuan Chen
Ziling Shao
Haiyu Zhou
Gansen Zhao

Frontiers in Genetics

doi 10.3389/fgene.2023.1254435

3,047 views
4 citations

Original Research

Published on 18 Sep 2023

ITRPCA: a new model for computational drug repositioning based on improved tensor robust principal component analysis

in Computational Genomics

Mengyun Yang
Bin Yang
Guihua Duan
Jianxin Wang

Frontiers in Genetics

doi 10.3389/fgene.2023.1271311

1,971 views
4 citations

Technology and Code

Published on 15 Sep 2023

ARGem: a new metagenomics pipeline for antibiotic resistance genes: metadata, analysis, and visualization

in Computational Genomics

Xiao Liang
Jingyi Zhang
Yoonjin Kim
Josh Ho
Kevin Liu
Ishi Keenum
Suraj Gupta
Benjamin Davis
Shannon L. Hepp
Liqing Zhang

Frontiers in Genetics

doi 10.3389/fgene.2023.1219297

7,368 views
2 citations

Original Research

Published on 13 Sep 2023

Machine learning and bioinformatics analysis to identify autophagy-related biomarkers in peripheral blood for rheumatoid arthritis

in Computational Genomics

Guoqi Dong
Hui Gao
Yingqi Chen
Huayuan Yang

Frontiers in Genetics

doi 10.3389/fgene.2023.1238407

3,427 views
4 citations

Original Research

Published on 08 Sep 2023

Comprehensive analysis of mitophagy-related genes in diagnosis and heterogeneous endothelial cells in chronic rhinosinusitis: based on bulk and single-cell RNA sequencing data

in Computational Genomics

Shican Zhou
Kai Fan
Ju Lai
Shiwang Tan
Zimu Zhang
Jingwen Li
Xiayue Xu
Chunyan Yao
BoJin Long
Chuanliang Zhao

Frontiers in Genetics

doi 10.3389/fgene.2023.1228028

4,179 views
1 citation

Original Research

Published on 08 Sep 2023

Identification and validation of disulfidptosis-associated molecular clusters in non-alcoholic fatty liver disease

in Computational Genomics

Xiaoxiao Yu
Zihao Guo
Zhihao Fang
Kai Yang
Changxu Liu
Zhichao Dong
Chang Liu

Frontiers in Genetics

doi 10.3389/fgene.2023.1251999

3,957 views
5 citations

Editorial

Published on 08 Sep 2023

Editorial: Predicting high-risk individuals for common diseases using multi-omics and epidemiological data, volume II

in Computational Genomics

Werner P. Veldsman
Xin Maizie Zhou
YuanWei Zhang
Bailiang Li
Lu Zhang

Frontiers in Genetics

doi 10.3389/fgene.2023.1280648

1,241 views

Original Research

Published on 07 Sep 2023

MBMethPred: a computational framework for the accurate classification of childhood medulloblastoma subgroups using data integration and AI-based approaches

in Computational Genomics

Edris Sharif Rahmani
Ankita Lawarde
Prakash Lingasamy
Sergio Vela Moreno
Andres Salumets
Vijayachitra Modhukur

Frontiers in Genetics

doi 10.3389/fgene.2023.1233657

5,111 views
6 citations

Methods

Published on 06 Sep 2023

Intra-FCY1: a novel system to identify mutations that cause protein misfolding

in Computational Genomics

N. Quan
Y. Eguchi
K. Geiler-Samerotte

Frontiers in Genetics

doi 10.3389/fgene.2023.1198203

2,841 views

Original Research

Published on 05 Sep 2023

A novel marker integrating multiple genetic alterations better predicts platinum sensitivity in ovarian cancer than HRD score

in Computational Genomics

Fan Yang
Wei Wei
Ganghua Li
Qiongyu Lan
Xiwei Liu
Lin Gao
Chao Zhang
Jiangtao Fan
Jundong Li

Frontiers in Genetics

doi 10.3389/fgene.2023.1240068

2,474 views
1 citation

Correction

Published on 05 Sep 2023

Corrigendum: A microarray data analysis investigating the pathogenesis and potential biomarkers of autophagy and ferroptosis in intervertebral disc degeneration

in Computational Genomics

Wenhao Kuang
Cong Jiang
Cheng Yu
Jinwei Hu
Yang Duan
Zhong Chen

Frontiers in Genetics

doi 10.3389/fgene.2023.1236744

1,502 views
1 citation

Original Research

Published on 31 Aug 2023

Gene network inference from single-cell omics data and domain knowledge for constructing COVID-19-specific ICAM1-associated pathways

in Computational Genomics

Mitsuhiro Odaka
Morgan Magnin
Katsumi Inoue

Frontiers in Genetics

doi 10.3389/fgene.2023.1250545

2,551 views
1 citation

Brief Research Report

Published on 31 Aug 2023

Prediction of distinct populations of innate lymphoid cells by transcriptional profiles

in Computational Genomics

Haiyao Dong
Zhenguang Du
Haoming Ma
Zhicheng Zhou
Haitao Yang
Zhenyuan Wang

Frontiers in Genetics

doi 10.3389/fgene.2023.1227452

1,714 views

Original Research

Published on 29 Aug 2023

A meta-analysis of microarray datasets to identify biological regulatory networks in Alzheimer’s disease

in Computational Genomics

Kimia Sadat Hashemi
Mohadese Koohi Aliabadi
Arian Mehrara
Elham Talebi
Ali Akbar Hemmati
Radin Dabbagh Rezaeiye
Mohammad Javad Ghanbary
Maryam Motealleh
Behnaz Dayeri
Shayan Khalili Alashti

Frontiers in Genetics

doi 10.3389/fgene.2023.1225196

4,892 views
6 citations

Technology and Code

Published on 24 Aug 2023

EasySSR: a user-friendly web application with full command-line features for large-scale batch microsatellite mining and samples comparison

in Computational Genomics

Sandy Ingrid Aguiar Alves
Victor Benedito Costa Ferreira
Carlos Willian Dias Dantas
Artur Luiz da Costa da Silva
Rommel Thiago Jucá Ramos

Frontiers in Genetics

doi 10.3389/fgene.2023.1228552

4,372 views
5 citations

Original Research

Published on 24 Aug 2023

An efficient convolutional neural network-based diagnosis system for citrus fruit diseases

in Computational Genomics

Zhangcai Huang
Xiaoxiao Jiang
Shaodong Huang
Sheng Qin
Su Yang

Frontiers in Genetics

doi 10.3389/fgene.2023.1253934

2,560 views
8 citations