Frontiers in Genetics | Computational Genomics section | New and Recent Articles https://www.frontiersin.org/journals/genetics/sections/computational-genomics RSS Feed for Computational Genomics section in the Frontiers in Genetics journal | New and Recent Articles en-us Frontiers Feed Generator,version:1 2026-08-17T16:54:01.946+00:00 60 https://www.frontiersin.org/articles/10.3389/fgene.2026.1813369 https://www.frontiersin.org/articles/10.3389/fgene.2026.1813369 <![CDATA[Integrating single-cell transcriptomics with deep learning for glioblastoma treatment]]> 2026-08-17T00:00:00Z Review Marybeth G. YonkMainak MustafiMegan A. LimKimberly B. HoangWilliam H. DelaneyCharee M. ThompsonThais FedericiYuhong DuNicholas M. BoulisAntonina MitrofanovaKecheng Lei https://www.frontiersin.org/articles/10.3389/fgene.2026.1799530 https://www.frontiersin.org/articles/10.3389/fgene.2026.1799530 <![CDATA[Sex-dependent prediction of autism]]> 2026-08-13T00:00:00Z Original Research Catriona J. MillerTheo PortlockDenis M. NyagaJustin M. O’Sullivan https://www.frontiersin.org/articles/10.3389/fgene.2026.1913487 https://www.frontiersin.org/articles/10.3389/fgene.2026.1913487 <![CDATA[PySimi: a unified framework for similarity measure evaluation in spectral clustering with applications to omics data]]> 2026-08-12T00:00:00Z Original Research Tianyi ShiXiucai YeZeng ZouWenyu XiTetsuya Sakurai https://www.frontiersin.org/articles/10.3389/fgene.2026.1880490 https://www.frontiersin.org/articles/10.3389/fgene.2026.1880490 <![CDATA[OtoVCE: a mechanism-aware language-model evidence layer for hereditary hearing-loss variant interpretation]]> 2026-08-12T00:00:00Z Original Research Shaopei YeLan WangPeng Chen https://www.frontiersin.org/articles/10.3389/fgene.2026.1845510 https://www.frontiersin.org/articles/10.3389/fgene.2026.1845510 <![CDATA[A reproducible pretreatment mucosal-inflammatory-remodeling state is associated with induction-phase anti-tumor necrosis factor non-response in ulcerative colitis]]> 2026-07-30T00:00:00Z Original Research Hongwei ZhengXin ZhuangWenbiao Chen https://www.frontiersin.org/articles/10.3389/fgene.2026.1922890 https://www.frontiersin.org/articles/10.3389/fgene.2026.1922890 <![CDATA[Editorial: Methods for imaging and omics data science: advances, applications, and spatiotemporal innovations]]> 2026-07-29T00:00:00Z Editorial Himel MallickLingling AnShrabanti ChowdhuryAnchal GhaiSuvo ChatterjeeSiyuan MaAli RahnavardPinaki Sarder https://www.frontiersin.org/articles/10.3389/fgene.2026.1871376 https://www.frontiersin.org/articles/10.3389/fgene.2026.1871376 <![CDATA[A novel multivariate framework for functional gene networks enrichment analysis]]> 2026-07-24T00:00:00Z Original Research Heewon ParkSeiya Imoto https://www.frontiersin.org/articles/10.3389/fgene.2026.1874451 https://www.frontiersin.org/articles/10.3389/fgene.2026.1874451 <![CDATA[Improved prediction of microbial optimal growth temperatures with neural networks and protein language models]]> 2026-07-20T00:00:00Z Original Research Mensur DlakićWilliam P. Inskeep https://www.frontiersin.org/articles/10.3389/fgene.2026.1896629 https://www.frontiersin.org/articles/10.3389/fgene.2026.1896629 <![CDATA[mwHIT: accelerated and accurate histone modification imputation using multi-scale window attention]]> 2026-07-13T00:00:00Z Original Research Zhaoxi ZhangLijuan JiaXiaoya FanZengyou HeJuan WangZhong Wang https://www.frontiersin.org/articles/10.3389/fgene.2026.1814786 https://www.frontiersin.org/articles/10.3389/fgene.2026.1814786 <![CDATA[Global–local feature fusion: a robust hybrid deep learning model for multiclass brain tumor classification with Grad-CAM++ interpretation]]> 2026-07-09T00:00:00Z Original Research Kirti PantPijush Kanti Dutta PramanikShahid Mohammad GanieAnindita SahaZhongming Zhao https://www.frontiersin.org/articles/10.3389/fgene.2026.1850219 https://www.frontiersin.org/articles/10.3389/fgene.2026.1850219 <![CDATA[CNNKSCEC: a deep learning-based framework for chromatin loop prediction with multi-source feature integration]]> 2026-07-03T00:00:00Z Original Research Junfeng WangBingzi ZhengLili WuXiaoyan LiuHaixia ZhaiJunwei Luo https://www.frontiersin.org/articles/10.3389/fgene.2026.1863100 https://www.frontiersin.org/articles/10.3389/fgene.2026.1863100 <![CDATA[GAHIB: graph attention VAE with a hyperbolic information bottleneck for biologically structured single-cell representations]]> 2026-06-26T00:00:00Z Original Research Zeyu FuJiawei FuXiaoxia WangYiyao LiuTianfei Ran https://www.frontiersin.org/articles/10.3389/fgene.2026.1817432 https://www.frontiersin.org/articles/10.3389/fgene.2026.1817432 <![CDATA[miRNAProtPred: computational prediction of human miRNA binding based on seed complementarity and thermodynamic stability]]> 2026-06-24T00:00:00Z Original Research Somenath DuttaManisha PritamSudipta SardarNitimoy MondalSun Gu Lee https://www.frontiersin.org/articles/10.3389/fgene.2026.1846707 https://www.frontiersin.org/articles/10.3389/fgene.2026.1846707 <![CDATA[Stereo-cell coupled with single-cell transcriptomics identifies a transitional metabolic state in maturing skeletal muscle myofibers]]> 2026-06-17T00:00:00Z Brief Research Report Langchao LiangYuxin GongChaochao ChaiShijie Hao https://www.frontiersin.org/articles/10.3389/fgene.2026.1820192 https://www.frontiersin.org/articles/10.3389/fgene.2026.1820192 <![CDATA[Transcriptomic profiling and experimental validation of myeloid-cell-differentiation-related key genes in osteoarthritis]]> 2026-06-17T00:00:00Z Original Research Jiaming LiuXinyu ZhangHai XuXueyi FuDuanyang ShengYinghe HuangYuanxin HuangXianglong LvWei Lu https://www.frontiersin.org/articles/10.3389/fgene.2026.1843679 https://www.frontiersin.org/articles/10.3389/fgene.2026.1843679 <![CDATA[Network-based analysis identifies shared mechanisms between ischemic stroke and myocardial infarction and therapeutic ingredients of Buyang Huanwu Decoction]]> 2026-06-17T00:00:00Z Original Research Shuaixin ZhangYue LinWenke XiaoWei ChenSanyin Zhang https://www.frontiersin.org/articles/10.3389/fgene.2026.1841532 https://www.frontiersin.org/articles/10.3389/fgene.2026.1841532 <![CDATA[Codon usage bias and molecular evolution of Dnajc15 across avian lineages]]> 2026-06-16T00:00:00Z Original Research Zeshuo ZhouJianke YangDuminda S. B. DissanayakeLisa SchwanzArthur GeorgesLei Xiong https://www.frontiersin.org/articles/10.3389/fgene.2026.1822168 https://www.frontiersin.org/articles/10.3389/fgene.2026.1822168 <![CDATA[scCCVGBen for benchmarking of single-cell representation learning anchored on a centroid-coupled variational graph attention autoencoder across scRNA-seq and scATAC-seq]]> 2026-06-16T00:00:00Z Original Research Zeyu FuJiawei FuChunlin ChenKeyang ZhangJunping WangTianfei RanSong Wang https://www.frontiersin.org/articles/10.3389/fgene.2026.1812729 https://www.frontiersin.org/articles/10.3389/fgene.2026.1812729 <![CDATA[Knowledge mapping of alström syndrome research: a bibliometric and visualization analysis based on WoS data from 2000 to 2025]]> 2026-06-09T00:00:00Z Review Heng ZhangHang FuXiaohui SuiShangan SiYuan ZhangKaifeng LiMengran WangZhe SongYuxin YangZiqi LiuGuiju Zhang https://www.frontiersin.org/articles/10.3389/fgene.2026.1851372 https://www.frontiersin.org/articles/10.3389/fgene.2026.1851372 <![CDATA[Editorial: Refining precision medicine through AI and multi-omics integration]]> 2026-06-09T00:00:00Z Editorial Viola Bianca SerioPu-Feng DuElisa FrullantiMaria Palmieri