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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mar. Sci.</journal-id>
<journal-title>Frontiers in Marine Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mar. Sci.</abbrev-journal-title>
<issn pub-type="epub">2296-7745</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmars.2018.00274</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Marine Science</subject>
<subj-group>
<subject>Original Research</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>The B-Vitamin Mutualism Between the Dinoflagellate <italic>Lingulodinium polyedrum</italic> and the Bacterium <italic>Dinoroseobacter shibae</italic></article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name><surname>Cruz-L&#x000F3;pez</surname> <given-names>Ricardo</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x0002A;</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x02020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/269477/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Maske</surname> <given-names>Helmut</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/199064/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Yarimizu</surname> <given-names>Kyoko</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/268063/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Holland</surname> <given-names>Neal A.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Oceanograf&#x000ED;a Biol&#x000F3;gica, Centro de Investigaci&#x000F3;n Cient&#x000ED;fica y de Educaci&#x000F3;n Superior de Ensenada (CICESE)</institution>, <addr-line>Ensenada</addr-line>, <country>Mexico</country></aff>
<aff id="aff2"><sup>2</sup><institution>Department of Chemistry and Biochemistry, San Diego State University</institution>, <addr-line>San Diego, CA</addr-line>, <country>United States</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Stanley Chun Kwan Lau, Hong Kong University of Science and Technology, Hong Kong</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Meinhard Simon, University of Oldenburg, Germany; John Everett Parkinson, Oregon State University, United States</p></fn>
<corresp id="c001">&#x0002A;Correspondence: Ricardo Cruz-L&#x000F3;pez <email>ricardo.crlp&#x00040;gmail.com</email></corresp>
<fn fn-type="other" id="fn001"><p>This article was submitted to Aquatic Microbiology, a section of the journal Frontiers in Marine Science</p></fn>
<fn fn-type="present-address" id="fn002"><p>&#x02020;Present Address: Ricardo Cruz-L&#x000F3;pez, Department of Chemistry and Biochemistry, San Diego State University, San Diego, CA, United States</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>28</day>
<month>08</month>
<year>2018</year>
</pub-date>
<pub-date pub-type="collection">
<year>2018</year>
</pub-date>
<volume>5</volume>
<elocation-id>274</elocation-id>
<history>
<date date-type="received">
<day>01</day>
<month>03</month>
<year>2018</year>
</date>
<date date-type="accepted">
<day>20</day>
<month>07</month>
<year>2018</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x000A9; 2018 Cruz-L&#x000F3;pez, Maske, Yarimizu and Holland.</copyright-statement>
<copyright-year>2018</copyright-year>
<copyright-holder>Cruz-L&#x000F3;pez, Maske, Yarimizu and Holland</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Recent research has shown that in aquatic systems pairs of prokaryote and eukaryote species exercise symbiotic exchanges of metabolites that are essential for the proliferation of either species. Using dinoflagellate <italic>Lingulodinium polyedrum</italic> cultures and a factorial design, we examined its growth at different concentrations of vitamin B<sub>1</sub> (thiamine) and B<sub>12</sub> (cobalamin). When both vitamins were at their lowest concentrations tested, 0.033 pM of B<sub>1</sub> and 0.053 pM of B<sub>12</sub> the growth was limited. When axenic <italic>L. polyedrum</italic> was co-cultured with the bacterium <italic>Dinoroseobacter shibae</italic>, a known B<sub>1</sub> and B<sub>12</sub> producer, then <italic>L. polyedrum</italic> grew at the same rate as in culture media supplemented with B<sub>1</sub> and B<sub>12</sub>. In the <italic>L. polyedrum</italic> vitamin&#x02014;limited culture (V-L), the abundance of attached and free-living <italic>D. shibae</italic> was higher than in the vitamin&#x02014;replete (V-R) culture. In the V-R and V-L co-cultures the measured particulate B<sub>12</sub> (pB<sub>12</sub>) concentration of attached and free-living <italic>D. shibae</italic> were in the range of 4.7 &#x000D7; 10<sup>&#x02212;19</sup> to 3 &#x000D7; 10<sup>&#x02212;18</sup> and 8.4 &#x000D7; 10<sup>&#x02212;21</sup> to1.2 &#x000D7; 10<sup>&#x02212;19</sup> (mol cell<sup>&#x02212;1</sup>), respectively. Without B<sub>12</sub> or B<sub>7</sub> (biotin) added to the culture medium of a co-culture of <italic>L. polyedrum</italic> and <italic>D. shibae</italic>, the measured dissolved B<sub>12</sub> (dB<sub>12</sub>) concentration was more than 60 pM higher than necessary for un-limited growth rates <italic>of L. polyedrum</italic>. In the same culture we measured B<sub>7</sub> in the <italic>L. polyedrum</italic> particulate fraction (pB<sub>7</sub>; 4.7 &#x000D7; 10<sup>&#x02212;19</sup> to 9.4 &#x000D7; 10<sup>&#x02212;19</sup> mol cell<sup>&#x02212;1</sup>). We suggest that in response to the production of B<sub>1</sub> and B<sub>12</sub> by <italic>D. shibae</italic> to supply <italic>L. polyedrum</italic> requeriments, the latter produced B<sub>7</sub>, which is required by <italic>D. shibae</italic>, and in our culture was only produced by <italic>L. polyedrum</italic> when <italic>D. shibae</italic> was present. We propose that <italic>D. shibae</italic> can control <italic>L. polyedrum</italic> through the release of B<sub>1</sub> and B<sub>12</sub>, and <italic>L. polyedrum</italic> can control <italic>D. shibae</italic> through the release of B<sub>7</sub>. <italic>D. shibae</italic> is also auxotroph for niacin and 4-amino-benzoic acid, not provided by the culture medium. Therefore, <italic>L. polyedrum</italic> might affect a similar control through the release of these specific compounds and organic substrate necessary for the growth of <italic>D. shibae</italic>.</p>
</abstract>
<kwd-group>
<kwd>B vitamin auxotrophy</kwd>
<kwd>growth limitation</kwd>
<kwd>Dinoflagellate-bacteria interactions</kwd>
<kwd>dissolved B<sub>12</sub></kwd>
<kwd>particulate B<sub>12</sub></kwd>
<kwd>particulate B<sub>7</sub></kwd>
</kwd-group>
<contract-num rid="cn001">CB-2008-01 106003</contract-num>
<contract-sponsor id="cn001">Consejo Nacional de Ciencia y Tecnolog&#x000ED;a<named-content content-type="fundref-id">10.13039/501100007350</named-content></contract-sponsor>
<counts>
<fig-count count="4"/>
<table-count count="4"/>
<equation-count count="0"/>
<ref-count count="62"/>
<page-count count="12"/>
<word-count count="9796"/>
</counts>
</article-meta>
</front>
<body>
<sec sec-type="intro" id="s1">
<title>Introduction</title>
<p>Eukaryotic phytoplankton and bacteria have developed a number of interkingdom metabolic interactions. These include growth stimulators (Ferrier et al., <xref ref-type="bibr" rid="B24">2002</xref>), potential toxin inducers (Green et al., <xref ref-type="bibr" rid="B28">2004</xref>, <xref ref-type="bibr" rid="B27">2006</xref>), cyst inducers (Adachi et al., <xref ref-type="bibr" rid="B3">2003</xref>, <xref ref-type="bibr" rid="B4">2004</xref>; Mayali et al., <xref ref-type="bibr" rid="B42">2007</xref>), growth inhibitors (Hare et al., <xref ref-type="bibr" rid="B29">2005</xref>), algicids (Doucette et al., <xref ref-type="bibr" rid="B19">1999</xref>), and chemosensors (Miller et al., <xref ref-type="bibr" rid="B43">2004</xref>). The interactions also include mutualistic trade-off of soluble factors, for example, iron siderophores (Amin et al., <xref ref-type="bibr" rid="B5">2009</xref>) and vitamins (Croft et al., <xref ref-type="bibr" rid="B16">2005</xref>; Wagner-D&#x000F6;bler et al., <xref ref-type="bibr" rid="B57">2010</xref>; Kazamia et al., <xref ref-type="bibr" rid="B34">2012</xref>; Cruz-L&#x000F3;pez and Maske, <xref ref-type="bibr" rid="B18">2016</xref>). B vitamins are essential growth factors for most marine eukaryotic phytoplankton because they are required for the activity of several enzymes in central metabolism. Vitamin B<sub>12</sub> (cobalamin; hereafter B<sub>12</sub>) is essential for the biosynthesis of deoxyriboses from riboses, the reduction and transfer of single carbon fragments in many biochemical pathways, porphyrin and methionine biosynthesis, which is dominant in eukaryotic phytoplankton (Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>; Sa&#x000F1;udo-Wilhelmy et al., <xref ref-type="bibr" rid="B53">2014</xref>). Vitamin B<sub>1</sub> (thiamin; hereafter B<sub>1</sub>) plays a major role for enzymes involved in primary carbon metabolism like the Krebs and Calvin-Benson cycles, and for branch-chain amino acid metabolism, like alanine, leucine and valine (Sa&#x000F1;udo-Wilhelmy et al., <xref ref-type="bibr" rid="B53">2014</xref>). Vitamin B<sub>7</sub> (biotin; hereafter B<sub>7</sub>) is essential for several carboxylase enzymes, including acetyl coenzyme A (CoA) carboxylase, which is involved in the fatty acid biosynthesis, and pyruvate carboxylase, which catalyzes the first step in gluconeogenesis by converting pyruvate to oxaloacetate, hence universally required (Croft et al., <xref ref-type="bibr" rid="B17">2006</xref>; Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>; Sa&#x000F1;udo-Wilhelmy et al., <xref ref-type="bibr" rid="B53">2014</xref>). Many phytoplankton species are natural B vitamin auxotrophs, meaning they lack the biosynthetic pathways to produce B vitamins and thus must acquire them from exogenous sources. Of the phytoplankton surveyed to date, 54% are B12 auxotrophs, 27% are B1 auxotrophs, and 8% are B7 auxotrophs (Croft et al., <xref ref-type="bibr" rid="B16">2005</xref>; Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>). Because these auxotrophs are common in natural waters, they are useful to study to determine the roles that niche partitioning and species succession play in phytoplankton blooms (Helliwell, <xref ref-type="bibr" rid="B30">2017</xref>).</p>
<p>Although B vitamin auxotrophy is not systematically distributed across the algal lineages, in particular, dinoflagellates have evolved obligate dependence on vitamins (Croft et al., <xref ref-type="bibr" rid="B17">2006</xref>; Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>; Helliwell et al., <xref ref-type="bibr" rid="B32">2011</xref>). Dinoflagellates form part of the eukaryotic phytoplankton and contribute significantly to the primary production of coastal areas (Moustafa et al., <xref ref-type="bibr" rid="B44">2010</xref>), many dinoflagellates form blooms that can represent a potential threat to coastal ecosystems, public health, economies, and fisheries (Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>). Tang et al. (<xref ref-type="bibr" rid="B56">2010</xref>) reported that of the surveyed dinoflagellate species that are involved in harmful algal bloom events, 100% required B<sub>12</sub>, 78% required B<sub>1</sub> and 32% B<sub>7</sub>.</p>
<p>Recent culture studies showed that for auxotrophic dinoflagellates a minimum of 2 &#x000D7; 10<sup>&#x02212;5</sup>-5 &#x000D7; 10<sup>&#x02212;4</sup> pM of B<sub>12</sub> and from 1.4 &#x000D7; 10<sup>&#x02212;11</sup> to 0.55 &#x000D7; 10<sup>&#x02212;6</sup> nM of B<sub>1</sub> are required for growth (Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>). These concentrations are typically found in coastal waters where dinoflagellates thrive (Gobler et al., <xref ref-type="bibr" rid="B25">2007</xref>; Panzeca et al., <xref ref-type="bibr" rid="B47">2009</xref>; Sa&#x000F1;udo-Wilhelmy et al., <xref ref-type="bibr" rid="B51">2012</xref>). During bloom conditions, the B<sub>1</sub> and B<sub>12</sub> concentrations are variable, from 5 to 20 pM for both vitamins; these concentrations should be sufficient to support dinoflagellate growth (Gobler et al., <xref ref-type="bibr" rid="B25">2007</xref>; Koch et al., <xref ref-type="bibr" rid="B38">2011</xref>).</p>
<p>Most experimental physiology studies related to vitamins have focused on single-vitamin limitation, for example, the role of B<sub>12</sub> at different concentrations (reviewed in Droop, <xref ref-type="bibr" rid="B23">2007</xref>; Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>). Droop (<xref ref-type="bibr" rid="B21">1974</xref>) found threshold type limitation for phosphate and B<sub>12</sub> in phytoplankton cultures. Other authors have reported concurrent limitation of vitamins with nitrogen (Gobler et al., <xref ref-type="bibr" rid="B25">2007</xref>; Koch et al., <xref ref-type="bibr" rid="B38">2011</xref>; Bertrand and Allen, <xref ref-type="bibr" rid="B8">2012</xref>), iron (Panzeca et al., <xref ref-type="bibr" rid="B48">2006</xref>; Bertrand et al., <xref ref-type="bibr" rid="B10">2007</xref>, <xref ref-type="bibr" rid="B9">2011</xref>; Koch et al., <xref ref-type="bibr" rid="B38">2011</xref>) or CO<sub>2</sub> (King et al., <xref ref-type="bibr" rid="B35">2011</xref>). Although Panzeca et al. (<xref ref-type="bibr" rid="B48">2006</xref>), reported primary and secondary production limitation by Fe, B<sub>1</sub>, and B<sub>12</sub> in coastal communities off the Antarctic, they did not investigate the potential for co-limitation of B<sub>12</sub> with other essential vitamins.</p>
<p>Heterotrophic bacteria, archaea, and marine cyanobacteria are the only known source of B vitamins (Bonnet et al., <xref ref-type="bibr" rid="B12">2010</xref>; Sa&#x000F1;udo-Wilhelmy et al., <xref ref-type="bibr" rid="B53">2014</xref>; Doxey et al., <xref ref-type="bibr" rid="B20">2015</xref>), although, in early studies, some phytoplankton species have also been reported to produce B vitamins (Bednar and Holm-Hansen, <xref ref-type="bibr" rid="B7">1964</xref>; Carlucci and Bowes, <xref ref-type="bibr" rid="B14">1970a</xref>,<xref ref-type="bibr" rid="B15">b</xref>; Aaronson et al., <xref ref-type="bibr" rid="B1">1971</xref>, <xref ref-type="bibr" rid="B2">1977</xref>). Hence dinoflagellates would have to acquire their B vitamin from the environment either through phagotrophy (Jeong et al., <xref ref-type="bibr" rid="B33">2005</xref>), active uptake from the dissolved fraction (Bertrand et al., <xref ref-type="bibr" rid="B10">2007</xref>; Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>; Kazamia et al., <xref ref-type="bibr" rid="B34">2012</xref>), or episymbiosis (Croft et al., <xref ref-type="bibr" rid="B16">2005</xref>; Wagner-D&#x000F6;bler et al., <xref ref-type="bibr" rid="B57">2010</xref>; Kazamia et al., <xref ref-type="bibr" rid="B34">2012</xref>; Kuo and Lin, <xref ref-type="bibr" rid="B40">2013</xref>; Xie et al., <xref ref-type="bibr" rid="B61">2013</xref>; Cruz-L&#x000F3;pez and Maske, <xref ref-type="bibr" rid="B18">2016</xref>). Little is known currently about the relative contribution of these different mechanisms to acquire the different vitamins by auxotrophic dinoflagellates.</p>
<p>Previously we reported <italic>Lingulodinium polyedrum</italic> vitamin auxotrophy for B<sub>1</sub> and B<sub>12</sub> (Cruz-L&#x000F3;pez and Maske, <xref ref-type="bibr" rid="B18">2016</xref>), where a high concentration of one vitamin cannot overcome the lack of the other. This research left several questions open: At very low, ecologically relevant concentrations of both vitamins, can increasing the concentration of one support increased algal growth without an increase the in the other vitamin? Also, what is provided by the dinoflagellate to the bacteria in exchange for the necessary B-vitamins? Here we report the effect of vitamin B<sub>1</sub> and B<sub>12</sub> under multiple vitamin concentrations on growth rate. We also report the B<sub>7</sub> and B<sub>12</sub> cellular quotas for <italic>L. polyedrum</italic> in co-culture with the bacterium <italic>Dinoroseobacter shibae</italic>, a well-known B<sub>1</sub> and B<sub>12</sub> producing bacterium. Differently from our previous work concerning a co-culture of <italic>L. polyedrum</italic> with a bacterial community, the present work did not include auxotrophic bacteria that could compete with <italic>L. polyedrum</italic> for B<sub>1</sub> and B<sub>12</sub>.</p>
</sec>
<sec sec-type="materials and methods" id="s2">
<title>Materials and methods</title>
<sec>
<title><italic>L. polyedrum</italic> growth conditions</title>
<p>Oceanic seawater was collected off Ensenada (31.671&#x000B0;N, 116.693&#x000B0;W; Ensenada, M&#x000E9;xico) treated with activated charcoal, filtered through GF/F, and 0.22-mm pore-size cartridge filter (Pall Corporation) and stored in the dark at room temperature to age for at least 2 months. Aged seawater was sparged with CO<sub>2</sub> (5 min per 1 L of seawater), autoclaved for 15 min and then equilibrated with air. <italic>L. polyedrum</italic> strain was isolated from Venice beach California and kindly provided by Avery Tatters (University of Southern California). Xenic <italic>L. polyedrum</italic> culture was grown in L1 medium (National Center for Marine Algae and Microbiota, NCMA, Maine, USA) prepared with aged oceanic water under 12:12 h light/dark cycle at an irradiance of 100 &#x003BC;mol m<sup>2</sup> s<sup>&#x02212;1</sup>, and a temperature of 20&#x000B0;C. To make the culture axenic, <italic>L. polyedrum</italic> culture was incubated with 1 mL of antibiotic solution (Penicillin, 5,000 U; Streptomycin, 5 mg mL<sup>&#x02212;1</sup>; Neomycin, 10 mg mL<sup>&#x02212;1</sup>. Sigma-Aldrich, P4083-100ML) for 50 mL of culture during 24 h, rinsed with the L1 medium, and repeated three times each step. Bacterial presence in the <italic>L. polyedrum</italic> culture was checked by staining with the nucleic acid-specific stain 4&#x02032;,6-diamino-2-phenylindole (DAPI,1 &#x003BC;g mL<sup>&#x02212;1</sup>) and quantification using epifluorescence microscopy (Axioskope II plus, Carl Zeiss, Oberkochen, Germany) connected by liquid light guide to a 175W xenon arc lamp (Lambda LS, Sutter), with optical filtering (Excitation, 360 nm/Dichroic, 395 nm/Emission, &#x0003E;397 nm; Semrock &#x00026; Zeiss) under X100 objective lens (Plan-Apochromat, Carl Zeiss). The axenic status was documented after three antibiotic rounds, and sterile medium washes when we could not detect bacteria in the culture using epifluorescence microscopy.</p>
</sec>
<sec>
<title>Assessment of <italic>L. polyedrum</italic> vitamin B<sub>1</sub> and B<sub>12</sub> limiting concentrations</title>
<p>To test the vitamin B<sub>1</sub> and B<sub>12</sub> limiting concentrations of <italic>L. polyedrum</italic>, cultures were grown in 50 mL cell culture flasks (BD Falcon&#x02122;). Cultures were acclimated by six semi-continuous transfers during 6 weeks with an initial cell concentration of 1,300 cell L<sup>&#x02212;1</sup>. The medium for <italic>L. polyedrum</italic> axenic cultures was supplemented with L1 and B<sub>1</sub>, B<sub>12</sub> vitamins (Sigma-Aldrich) using a factorial experimental design combining 1) two vitamins (B<sub>1</sub> &#x0002B; B<sub>12</sub>) and five vitamin concentrations ranging from 3.33 &#x000D7; 10<sup>&#x02212;2</sup> to 3.33 &#x000D7; 10<sup>1</sup> pM of B<sub>1</sub> and 5.25 &#x000D7; 10<sup>&#x02212;2</sup> to 5.25 &#x000D7; 10<sup>1</sup> pM of B<sub>12</sub> (Table <xref ref-type="table" rid="T1">1</xref>). After acclimation, each culture and corresponding vitamin amendment were transferred and grown in 15 mL glass test tubes with silicon stoppers (<italic>n</italic> &#x0003D; 3) and placed randomly in transparent test tube holders to minimize bias in the data due to a heterogeneous light field in the incubator or shading by other cultures tubes. Cell growth rate was monitored by first mixing the cultures with an inclined rotating test tube holder (10 rpm) and then measuring <italic>in vivo</italic> Chlorophyll <italic>a</italic> (Chl <italic>a</italic>) fluorescence using a Turner Designs 10-000 fluorometer at the midpoint of the light phase. The specific growth rate (&#x003BC;) was calculated according to the equation &#x003BC; &#x0003D; ln (N2/N1)/(t2-t1): where N1 and N2 was <italic>in vivo</italic> Chl <italic>a</italic> fluorescence in relative units (r. u.) at time 1 (t1) and time 2 (t2), respectively. To calculate &#x003BC;, we used the data obtained during the exponential phase of each growth curve on days 8, 10 and 12 after inoculation. <italic>in vivo</italic> Chl <italic>a</italic> fluorescence and cell counts were well correlated (Figure <xref ref-type="supplementary-material" rid="SM1">S1</xref>, <italic>r</italic><sup>2</sup> &#x0003D; 0.98). The specific growth rate was adjusted to a Monod-type model of specific growth rate vs. the initial B<sub>1</sub> and B<sub>12</sub> concentrations in the bioassays. A least square estimate of a Michaelis-Menten type kinetic was calculated with the PRISM 6.07v software (GraphPad, CA, USA).</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>Half-saturation constants (<italic>K</italic>s) and maximum specific growth rates (&#x003BC;) of <italic>L. polyedrum</italic> for B<sub>1</sub> and B<sub>12</sub> amendments.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th valign="top" align="left"><bold>B<sub>12</sub></bold></th>
<th valign="top" align="center"><bold><italic>K</italic>max</bold></th>
<th valign="top" align="center"><bold><italic>K</italic><sub>s</sub></bold></th>
<th valign="top" align="center"><bold>&#x003BC; max</bold></th>
<th valign="top" align="center"><bold><italic>R</italic><sup>2</sup></bold></th>
</tr>
<tr>
<th valign="top" align="left"><bold>(pM)</bold></th>
<th valign="top" align="center"><bold>(B<sub>1</sub> pM)</bold></th>
<th valign="top" align="center"><bold>(B<sub>1</sub> pM)</bold></th>
<th valign="top" align="center"><bold>(d<sup>&#x02212;1</sup>)</bold></th>
<th/>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">0.0526</td>
<td valign="top" align="center">3.3</td>
<td valign="top" align="center">0.60</td>
<td valign="top" align="center">0.17 &#x000B1; 0.018</td>
<td valign="top" align="center">0.72</td>
</tr>
<tr>
<td valign="top" align="left">0.526</td>
<td valign="top" align="center">3.3</td>
<td valign="top" align="center">1.02</td>
<td valign="top" align="center">0.2 &#x000B1; 0.016</td>
<td valign="top" align="center">0.88</td>
</tr>
<tr>
<td valign="top" align="left">5.26</td>
<td valign="top" align="center">3.3</td>
<td valign="top" align="center">0.14</td>
<td valign="top" align="center">0.11 &#x000B1; 0.021</td>
<td valign="top" align="center">0.15</td>
</tr>
<tr>
<td valign="top" align="left">52.6</td>
<td valign="top" align="center">3.3</td>
<td valign="top" align="center">0.75</td>
<td valign="top" align="center">0.16 &#x000B1; 0.017</td>
<td valign="top" align="center">0.75</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec>
<title>Dinoflagellate-bacterial co-culture</title>
<p>The axenic bacterium culture <italic>D. shibae</italic> DFL-12<sup>T</sup> (NCMA, Maine, USA) was grown in oceanic seawater supplemented with yeast extract (2 g L<sup>&#x02212;1</sup>) and peptone (1.25 g L<sup>&#x02212;1</sup>). The co-culture was started by inoculating <italic>D. shibae</italic> cells to a final concentration of 10<sup>6</sup> cells mL<sup>&#x02212;1</sup> of an axenic, early exponential phase <italic>L. polyedrum</italic> culture in the L1 medium that was B<sub>1</sub>B<sub>7</sub>B<sub>12</sub>-supplemented (hereafter vitamin-replete, V-R) or B<sub>1</sub>B<sub>7</sub>B<sub>12</sub> non-supplemented (hereafter vitamin-limited, V-L) medium and incubated under 12:12 h light/dark cycle, irradiance of 100 &#x003BC;mol m<sup>2</sup> s<sup>&#x02212;1</sup>, and a temperature of 20&#x000B0;C. The cultures were transferred weekly to fresh L1 medium at a ratio of 1:10 during 4 weeks before the experiment.</p>
</sec>
<sec>
<title>Sampling and cell fixation</title>
<p>All cultures were monitored for 15 d, and sampled every 2 days for cell counting by light microscopy. One milliliter of <italic>L. polyedrum</italic> cells from V-R and V-L cultures were harvested at lag (d2), exponential (d8) and stationary (d15) phase and fixed with paraformaldehyde-PBS at a final concentration of 1% for 12 h at 4&#x000B0;C. For attached bacteria, fixed cells were immobilized onto an 8.0 &#x003BC;m pore size, 25 mm-diameter Nucleopore filters (Whatman International, Ltd., Maidstone, England), and rinsed with phosphate-buffered saline (PBS, 0.1 M NaCl, 2 mM KCl, 4 mM Na<sub>2</sub>HPO<sub>4</sub>, pH 8.1; Palacios and Mar&#x000ED;n, <xref ref-type="bibr" rid="B46">2008</xref>). For free-living bacteria, the fraction which passed through an 8.0 &#x003BC;m pore size filter was collected on 0.2 &#x003BC;m pore size, 25 mm-diameter Nucleopore filters (Whatman International, Ltd., Maidstone, England) and rinsed with PBS. The cells collected on the 8.0 &#x003BC;m filter were covered with 13 &#x003BC;L of low-melting-point agarose (0.05%, LMA) (BioRad, 161-3111) at 55&#x000B0;C, dried for 15 min at 37&#x000B0;C, then LMA was added again and the filter dried as previously. For all filtration steps, the pressure difference was &#x0003C;3.3 kPa to minimize cell damage.</p>
</sec>
<sec>
<title>Visual observations</title>
<p>To visualize <italic>D. shibae</italic> cells attached to <italic>L. polyedrum</italic> cells, we used an epifluorescence microscope (Axioskope II plus, Carl Zeiss, Oberkochen, Germany; oil immersion X100 objective, Plan-Apochromat, Carl Zeiss; 175W xenon arc lamp; Lambda LS, Sutter connected through a liquid light guide) with a triple Sedat filter, a dichroic filter with three transmission bands. Excitation and emission spectra were controlled by filter wheels (Lambda 10-3, Sutter). Images were captured with a cooled CCD camera (Clara E, Andor) with 10 ms integration time. Optical stacks, 2.0 &#x003BC;m focal distance between images, were acquired with a computer controlled focusing stage (Focus Drive, Ludl Electronic Products, Hawthorne, NY, USA) and Micro-Manager (version 1.3.40, Vale Lab, UCSF) that controlled the filter selection and the focusing stage. The images were processed in ImageJ (Schneider et al., <xref ref-type="bibr" rid="B54">2012</xref>).</p>
</sec>
<sec>
<title>Quantification of dissolved and particulate B<sub>12</sub> (dB<sub>12</sub>, pB<sub>12</sub>)</title>
<p>For quantification of dB<sub>12</sub> and pB<sub>12</sub> we prepared four different fractions: 20 mL of <italic>L. polyedrum</italic> cells from V-R and V-L cultures were harvested at time zero, mid-exponential and stationary phase (<italic>n</italic> &#x0003D; 3). These samples were (a) pre-filtered (8.0 &#x003BC;m pore size, 25 mm-diameter Nuclepore filters) to harvest the fraction of pB<sub>12</sub> of the <italic>L. polyedrum</italic> and attached <italic>D. shibae</italic>; (b) The filtrate of (a) was filtered again (0.4 &#x003BC;m pore size, 25 mm-diameter polycarbonate filter (Whatman International, Ltd., Maidstone, England) to recover the free-living <italic>D. shibae</italic> fraction. (c) The first filter (a) containing the <italic>L. polyedrum</italic> cells with attached <italic>D. shibae</italic> were treated with 10 mM N-acetyl cysteine (NAC; Sigma) (PBS&#x02212;0.2 &#x003BC;M calcium chloride, 0.5 mM magnesium chloride, 15 mM glucose) for 1 h with agitation (70 rpm) at room temperature to detach adhered bacteria (Barr et al., <xref ref-type="bibr" rid="B6">2013</xref>). Filtering this sample again with 0.8 &#x003BC;m collected <italic>L. polyedrum</italic>, cells without attached <italic>D. shibae</italic>. (d) The detached <italic>D. shibae</italic> cells were collected onto a 0.4 &#x003BC;m pore size, 25 mm-diameter polycarbonate filter.</p>
<p>Vitamin B<sub>12</sub> was quantified by Enzyme-Linked Immunosorbent Assay, ELISA (Immunolab GmbH, B12-E01. Kassel, Germany) according to Zhu et al. (<xref ref-type="bibr" rid="B62">2011</xref>). These authors tested the ELISA with seawater samples and found close to 100 percent recovery of cyanocobalamin, methylcobalamin, hydroxycobalamin and coenzyme B<sub>12</sub>, but the method cannot distinguish between these different forms of B<sub>12</sub>.</p>
<p>For dB<sub>12</sub>, the filtered sample (0.2 &#x003BC;m) was pre-concentrated by solid phase (RP-C18) extraction according to Okbamichael and Sa&#x000F1;udo-Wilhelmy (<xref ref-type="bibr" rid="B45">2004</xref>); the column was eluted with 5 mL methanol, the methanol was evaporated at 60&#x000B0;C with low vacuum, the sediment dissolved in ddH<sub>2</sub>0 with a final volume of 1.5 mL, and 50 &#x003BC;L of the concentrate was injected into the ELISA well plate for quantification. Villegas-Mendoza et al. (in preparation) report a recovery efficiency of 85 percent using the above method for dissolved B<sub>12</sub>.</p>
<p>For the pB<sub>12</sub>, filters were cut for easier disintegration and transferred to bead beating tubes using 0.5 mm zirconia beads (biospec.com) with 1 mL of methanol (10:1 methanol:beads). Bead beating was conducted for 5 min followed by 5 min at &#x02212;20&#x000B0;C, and repeated twice. The tubes were centrifuged at 5,000 rpm for 10 min and the supernatant transferred to a fresh tube. The methanol was evaporated at 60&#x000B0;C with vacuum, the sediment dissolved in ddH<sub>2</sub>0 with a final volume of 1.5 mL, and 50 &#x003BC;L of the concentrate was injected into the ELISA well plate for quantification.</p>
</sec>
<sec>
<title>Quantification of particulate B<sub>7</sub> (pB<sub>7</sub>)</title>
<p>The samples were prepared for the solid extraction method described in Suffridge et al. (<xref ref-type="bibr" rid="B55">2017</xref>), with a slight modification. One hundred milliliters of axenic <italic>L. polyedrum</italic> culture (<italic>n</italic> &#x0003D; 3) was harvested at exponential phase using 8.0 &#x003BC;m pore size, 25 mm-diameter Nuclepore filters (Whatman International, Ltd. Maidstone, England). 100 mL of <italic>L. polyedrum</italic> &#x0002B; <italic>D. shibae</italic> culture (<italic>n</italic> &#x0003D; 3) was harvested at mid-exponential phase, and pre-filtered (a) to harvest the fraction of particulate B<sub>7</sub> of the <italic>L. polyedrum</italic> and attached <italic>D. shibae</italic> using 8.0 &#x003BC;m pore size, 25 mm-diameter Nuclepore filter; (b) to collect the free-living <italic>D. shibae</italic> fraction the filtrate from (a) was filtered with 0.4 &#x003BC;m pore size, 25 mm-diameter polycarbonate filter (Whatman International, Ltd., Maidstone, England). The first filter (a) containing <italic>L. polyedrum</italic> cells with attached <italic>D. shibae</italic> was rinsed with 10 mL of Milli-Q water to detach adhered <italic>D. shibae</italic>. (c) Filtering this fraction again through 0.8 &#x003BC;m collected <italic>L. polyedrum</italic> cells without attached <italic>D. shibae</italic>. (d) The detached <italic>D. shibae</italic> cells passing through 8.0 &#x003BC;m filter were collected onto a 0.4 &#x003BC;m pore size, 25 mm-diameter polycarbonate filter.</p>
<p>Frozen filters containing the different fractions mentioned above were processed according to Suffridge et al. (<xref ref-type="bibr" rid="B55">2017</xref>) with slight modifications. In brief, frozen filters were placed in an autoclaved 1.5 mL Eppendorf tube with 1 mL of diluent (50% LC-MS grade acetonitrile, 50% water, 0.1% formic acid). The cells were lysed by repeated vortexing for 5 min followed by 1 min cooling on ice for a total period of 30 min. The cells were further sonicated for 5 min. The cell lysate was passed through 0.2 &#x003BC;m pore size, 25 mm-diameter polycarbonate filter (Whatman International, Ltd, Maidstone, England) to remove large particles and cell debris. The filters were washed with 0.5 mL of diluent to collect residual cell metabolites. An equal volume of chloroform was added to the filtrate; the mix was vigorously shaken for 1 min and then centrifuged for liquid phase extraction. The top aqueous phase was transferred to a new Eppendorf tube. The liquid phase extraction with chloroform was repeated twice. The residual aqueous phase was adjusted to 300&#x02013;500 &#x003BC;L with the diluent, and then the sample was injected in triplicate in a LC-MS (Applied Biosystems API4000 SCIEX) for pB<sub>7</sub> quantification. To obtain the efficiency of recovery, 100 ng mL<sup>&#x02212;1</sup> of B<sub>7</sub> standard (Sigma-Aldrich-B4501) was added to three different samples.</p>
</sec>
<sec>
<title><italic>D. shibae</italic> frequency of attachment on <italic>L. polyedrum</italic></title>
<p>The frequency was established using the co-culture in exponential phase with modifications as follows: An initial V-R (V-R<sub>0</sub>) culture was followed for 15 d, then, the culture was transferred weakly to fresh L1 medium under semi-continuous culture conditions during 4 weeks; each consecutive culture was termed V-R<sub>1</sub>, V-R<sub>2</sub>, and V-R<sub>3.</sub> A parallel culture was started from the V-R<sub>0</sub> culture under V-L conditions, this was termed V-L<sub>0</sub>, then the culture was transferred to a second V-L condition, and termed V-L<sub>1</sub>, and for the next transferred, add-back to a V-R condition, and termed V-L<sub>1</sub> to V-<inline-formula><mml:math id="M1"><mml:msub><mml:mrow><mml:mtext>R</mml:mtext></mml:mrow><mml:mrow><mml:msup><mml:mrow><mml:mn>1</mml:mn></mml:mrow><mml:mrow><mml:mtext>&#x02032;</mml:mtext></mml:mrow></mml:msup></mml:mrow></mml:msub></mml:math></inline-formula>. In each culture, a sample at mid-exponential phase was taken, and processed as described in <italic>Sampling and cell fixation</italic>, and <italic>Visual observations</italic>.</p>
</sec>
<sec>
<title>Statistical analysis</title>
<p>One-way ANOVA was used to compare the specific growth rate during exponential phase at day 8 of <italic>L. polyedrum</italic> under V-R vs. V-L cultures, to compare the dB<sub>12</sub> in V-R vs. V-L cultures, and to compare pB<sub>12</sub> from attached and free-living <italic>D. shibae</italic> at lag, exponential and stationary phase. Since the distribution of the number of attached <italic>D. shibae</italic> on <italic>L. polyedrum</italic> cell had no Gaussian distribution, we used a Mann&#x02013;Whitney test to assess the significance of the number of attached bacteria on <italic>L. polyedrum</italic> during mid-exponential phase at day 8. All analysis were performed using STATISTICA 7.1v software (Stat Soft Inc., USA).</p>
</sec>
</sec>
<sec sec-type="results" id="s3">
<title>Results</title>
<sec>
<title>Quantitative vitamin B<sub>1</sub> and B<sub>12</sub> requirements</title>
<p><italic>L. polyedrum</italic> has recently been shown to be vitamin B<sub>1</sub> and B<sub>12</sub> auxotroph but not to be B<sub>7</sub> auxotroph (Cruz-L&#x000F3;pez and Maske, <xref ref-type="bibr" rid="B18">2016</xref>), following the pattern of the majority of the examined dinoflagellate species requiring these two vitamins (Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>). In a new set of batch culture experiments, we explored the growth limiting concentrations for this species using a factorial design for both vitamins. In these experiments, cultures exhibited a &#x003BC;<sub>max</sub> of 0.18 &#x000B1; 0.003 d<sup>&#x02212;1</sup> (<italic>n</italic> &#x0003D; 3) in the ranges of 0.33&#x02013;3.3 pM for B<sub>1</sub>, and 0.053&#x02013;0.53 pM for B<sub>12</sub> (Figure <xref ref-type="fig" rid="F1">1</xref>). Vitamin half-saturation constants (<italic>K</italic>s) for &#x003BC;<sub>max</sub> were 3.3 pM for B<sub>1</sub>, and 0.53 pM for B<sub>12</sub> (Table <xref ref-type="table" rid="T1">1</xref>). Growth rates and biomass were strongly dependent on both vitamins and did not grow at concentrations of 0.033 and 0.053 pM of B<sub>1</sub> and B<sub>12</sub>, respectively (Tables <xref ref-type="supplementary-material" rid="SM1">S1</xref>, <xref ref-type="supplementary-material" rid="SM1">S2</xref>).</p>
<fig id="F1" position="float">
<label>Figure 1</label>
<caption><p>Vitamin B<sub>1</sub> vs. B<sub>12</sub> growth kinetics curve for <italic>L. polyedrum</italic>. The data plotted are from 16 (<italic>n</italic> &#x0003D; 3) independent experiments. <italic>L. polyedrum</italic> growth under <bold>(A)</bold> 0.0526, <bold>(B)</bold> 0.526, <bold>(C)</bold> 5.26, <bold>(D)</bold> 52.6 pM of B<sub>12</sub>, and 0.0333, 0.333, 3.33, and 33.3 pM of B<sub>1</sub>. Error bars represented one standard deviation (<italic>n</italic> &#x0003D; 3). A hyperbolic Michaelis&#x02013;Menten model is plotted, <italic>K</italic>s and &#x003BC;max are summarized in Table <xref ref-type="table" rid="T1">1</xref>.</p></caption>
<graphic xlink:href="fmars-05-00274-g0001.tif"/>
</fig>
</sec>
<sec>
<title>dB<sub>12</sub> and cell quotas of <italic>L. polyedrum</italic> and <italic>D. shibae</italic></title>
<p>Dissolved B<sub>12</sub> varied between cultures. During the lag phase, in the V-R culture, dB<sub>12</sub> was 42.7 (&#x000B1;1.8) pM, whereas in the V-L culture dB<sub>12</sub> was 29.9 (&#x000B1;5.3) pM. In exponential phase, in the V-R culture the dB<sub>12</sub> was 43.1 (&#x000B1;8.6) pM, and in the V-L 65.3 (&#x000B1;24.3) pM (Table <xref ref-type="table" rid="T1">1</xref>). During stationary phase, in the V-R culture dB<sub>12</sub> was 37.6 (&#x000B1;3.1) pM, and in the V-L culture 372 (&#x000B1;2.4) pM. The dB<sub>12</sub> was higher during lag phase in the V-R than the V-L culture, dB<sub>12</sub> concentration in the V-R and V-L cultures were similar during stationary phase, but unexpectedly during exponential phase, the dB<sub>12</sub> in the V-R culture was much lower than in the V-L culture.</p>
<p>The B<sub>12</sub> cell quotas (mol cell<sup>&#x02212;1</sup>) of <italic>L. polyedrum</italic>, attached and free-living <italic>D. shibae</italic> were calculated by dividing the pB<sub>12</sub> concentration by cell abundance. Samples were taken at the lag, exponential and stationary phase of the V-R and V-L cultures. For <italic>L. polyedrum</italic>, during the lag phase, in the V-R and V-L culture, the pB<sub>12</sub> were both the same, 2.7 &#x000D7; 10<sup>&#x02212;17</sup> mol cell<sup>&#x02212;1</sup>, respectively (Table <xref ref-type="table" rid="T2">2</xref>). During the exponential phase, in the V-R and V-L cultures, the cell quotas were similar at 8.9 &#x000D7; 10<sup>&#x02212;18</sup> (&#x000B1;1.05 &#x000D7; 10<sup>&#x02212;18</sup>) and 9.9 &#x000D7; 10<sup>&#x02212;18</sup> (&#x000B1;1.1 &#x000D7; 10<sup>&#x02212;18</sup>) mol cell<sup>&#x02212;1</sup>, decreasing during the stationary phase to 5.8 &#x000D7; 10<sup>&#x02212;18</sup> (&#x000B1;5.6 &#x000D7; 10<sup>&#x02212;19</sup>) and 5.0 &#x000D7; 10<sup>&#x02212;18</sup> (&#x000B1;7.1 &#x000D7; 10<sup>&#x02212;19</sup>) mol cell<sup>&#x02212;1</sup> in V-R and V-L cultures, respectively. The cell quotas of <italic>L. polyedrum</italic> in both types of culture were similar and showed maximum dB<sub>12</sub> concentrations during exponential phase.</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p>Dissolved and B<sub>12</sub> quotas expressed per cell (mol cell<sup>&#x02212;1</sup>) for <italic>L. polyedrum</italic> and <italic>D. shibae</italic> in co-culture.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th/>
<th/>
<th valign="top" align="center" colspan="3" style="border-bottom: thin solid #000000;"><bold>B</bold><sub><bold>12</bold></sub> <bold>dissolved (pM)</bold></th>
<th valign="top" align="center" colspan="3" style="border-bottom: thin solid #000000;"><bold>B</bold><sub><bold>12</bold></sub> <bold>per cell (mol cell</bold> <sup><bold>&#x02212;1</bold></sup><bold>)</bold></th>
</tr>
<tr>
<th/>
<th/>
<th valign="top" align="center"><bold>Lag (</bold><italic><bold>n</bold></italic> &#x0003D; <bold>4)</bold></th>
<th valign="top" align="center"><bold>Exp (</bold><italic><bold>n</bold></italic> &#x0003D; <bold>4)</bold></th>
<th valign="top" align="center"><bold>Stat (</bold><italic><bold>n</bold></italic> &#x0003D; <bold>4)</bold></th>
<th valign="top" align="center"><bold>Lag (</bold><italic><bold>n</bold></italic> &#x0003D; <bold>1)</bold></th>
<th valign="top" align="center"><bold>Exp (</bold><italic><bold>n</bold></italic> &#x0003D; <bold>3)</bold></th>
<th valign="top" align="center"><bold>Stat (</bold><italic><bold>n</bold></italic> &#x0003D; <bold>3)</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><italic>L. polyedrum</italic></td>
<td valign="top" align="left">V-R</td>
<td valign="top" align="center">62.9 (&#x000B1;40.4)</td>
<td valign="top" align="center">43 (&#x000B1;8.63)</td>
<td valign="top" align="center">37.6 (&#x000B1;3.15)</td>
<td valign="top" align="center">2.71 &#x000D7; 10<sup>&#x02212;17</sup></td>
<td valign="top" align="center">8.9 &#x000D7; 10<sup>&#x02212;18</sup> (&#x000B1;1.05 &#x000D7; 10<sup>&#x02212;18</sup>)</td>
<td valign="top" align="center">5.8 &#x000D7; 10<sup>&#x02212;18</sup> (&#x000B1;5.6 &#x000D7; 10<sup>&#x02212;19</sup>)</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">V-L</td>
<td valign="top" align="center">26.9 (&#x000B1;5.3)</td>
<td valign="top" align="center">65.3 (&#x000B1; 24.31)</td>
<td valign="top" align="center">37.2 (&#x000B1;2.43)</td>
<td valign="top" align="center">2.72 &#x000D7; 10<sup>&#x02212;17</sup></td>
<td valign="top" align="center">10 &#x000D7; 10<sup>&#x02212;18</sup> (&#x000B1;1.06 &#x000D7; 10<sup>&#x02212;18</sup>)</td>
<td valign="top" align="center">5 &#x000D7; 10<sup>&#x02212;18</sup> (&#x000B1;7.1 &#x000D7; 10<sup>&#x02212;19</sup>)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>D. shibae</italic>- free-living</td>
<td valign="top" align="left">V-R</td>
<td/>
<td/>
<td/>
<td valign="top" align="center">1.2 &#x000D7; 10<sup>&#x02212;19</sup></td>
<td valign="top" align="center">6.5 &#x000D7; 10<sup>&#x02212;20</sup> (&#x000B1;1.7 &#x000D7; 10<sup>&#x02212;20</sup>)</td>
<td valign="top" align="center">1.6 &#x000D7; 10<sup>&#x02212;20</sup> (2 &#x000D7; 10<sup>&#x02212;21</sup>)</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">V-L</td>
<td/>
<td/>
<td/>
<td valign="top" align="center">9.7 &#x000D7; 10<sup>&#x02212;20</sup></td>
<td valign="top" align="center">2.9 &#x000D7; 10<sup>&#x02212;20</sup> (&#x000B1;3.2 &#x000D7; 10<sup>&#x02212;21</sup>)</td>
<td valign="top" align="center">8.4 &#x000D7; 10<sup>&#x02212;21</sup> (3.3 &#x000D7; 10<sup>&#x02212;22</sup>)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>D. shibae</italic>- attached</td>
<td valign="top" align="left">V-R</td>
<td/>
<td/>
<td/>
<td valign="top" align="center">3.1 &#x000D7; 10<sup>&#x02212;18</sup></td>
<td valign="top" align="center">5.9 &#x000D7; 10<sup>&#x02212;19</sup> (&#x000B1;1.3 &#x000D7; 10<sup>&#x02212;19</sup>)</td>
<td valign="top" align="center">4.8 &#x000D7; 10<sup>&#x02212;19</sup> (&#x000B1;1.3 &#x000D7; 10<sup>&#x02212;20</sup>)</td>
</tr>
<tr>
<td/>
<td valign="top" align="left">V-L</td>
<td/>
<td/>
<td/>
<td valign="top" align="center">3 &#x000D7; 10<sup>&#x02212;18</sup></td>
<td valign="top" align="center">5.2 &#x000D7; 10<sup>&#x02212;19</sup> (&#x000B1;4.4 &#x000D7; 10<sup>&#x02212;20</sup>)</td>
<td valign="top" align="center">4.7 &#x000D7; 10<sup>&#x02212;19</sup> (&#x000B1;9.2 &#x000D7; 10<sup>&#x02212;22</sup>)</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>V-R, vitamin-replete; V-L, vitamin-limited. Lag, Lag phase; Exp, exponential phase; Stat, stationary phase</italic>.</p>
</table-wrap-foot>
</table-wrap>
<p>For free-living <italic>D. shibae</italic>, the estimates for the lag, exponential and stationary phase in the V-R culture, cell quotas were 1.2 &#x000D7; 10<sup>&#x02212;19</sup>, 6.5 &#x000D7; 10<sup>&#x02212;20</sup> (&#x000B1;1.7 &#x000D7; 10<sup>&#x02212;20</sup>) and 1.6 &#x000D7; 10<sup>&#x02212;20</sup> (2.1 &#x000D7; 10<sup>&#x02212;21</sup>), and for the V-L culture, they were 9.7 &#x000D7; 10<sup>&#x02212;20</sup>, 2.9 &#x000D7; 10<sup>&#x02212;20</sup> (&#x000B1;3.2 &#x000D7; 10<sup>&#x02212;21</sup>) and 8.5 &#x000D7; 10<sup>&#x02212;21</sup> (3.3 &#x000D7; 10<sup>&#x02212;22</sup>) mol cell<sup>&#x02212;1</sup>. For the attached <italic>D. shibae</italic>, the estimates for the lag, exponential and stationary phase in V-R culture were 3.1 &#x000D7; 10<sup>&#x02212;18</sup>, 5.9 &#x000D7; 10<sup>&#x02212;19</sup> (&#x000B1;1.3 &#x000D7; 10<sup>&#x02212;19</sup>) and 4.9 &#x000D7; 10<sup>&#x02212;19</sup> (&#x000B1;1.3 &#x000D7; 10<sup>&#x02212;20</sup>) mol cell<sup>&#x02212;1</sup>, and for the V-L culture were 3.0 &#x000D7; 10<sup>&#x02212;18</sup>, 5.3 &#x000D7; 10<sup>&#x02212;19</sup> (&#x000B1;4.4 &#x000D7; 10<sup>&#x02212;20</sup>), 4.7 &#x000D7; 10<sup>&#x02212;19</sup> (&#x000B1;9.2 &#x000D7; 10<sup>&#x02212;22</sup>) mol cell<sup>&#x02212;1</sup>. The <italic>D. shibae</italic> B<sub>12</sub> cell quotas of attached <italic>D. shibae</italic> were always much higher than those for free-living <italic>D. shibae</italic> by a factor 10 to 55 (Table <xref ref-type="table" rid="T2">2</xref>).</p>
</sec>
<sec>
<title>B<sub>7</sub> cell quotas of <italic>L. polyedrum</italic> and <italic>D. shibae</italic></title>
<p>We could not detect pB<sub>7</sub> in <italic>L. polyedrum</italic> axenic cultures, while in the xenic culture; <italic>L. polyedrum</italic> contained an average of 7.07 &#x000D7; 10<sup>&#x02212;19</sup> mol cell<sup>&#x02212;1</sup> of B<sub>7</sub>. As reported previously, <italic>D. shibae</italic> can thrive in two phenotypes, in attached mode or free-living; when we tried to quantify the free-living fraction, we could not detect any trace of pB<sub>7</sub>, whereas, in the attached fraction, we quantified an average of 1.8 &#x000D7; 10<sup>&#x02212;19</sup> (<italic>n</italic> &#x0003D; 2) mol cell<sup>&#x02212;1</sup> (Table <xref ref-type="table" rid="T3">3</xref>).</p>
<table-wrap position="float" id="T3">
<label>Table 3</label>
<caption><p>B<sub>7</sub> quotas expressed per cell (mol cell<sup>&#x02212;1</sup>) for axenic <italic>L. polyedrum</italic> and with <italic>D. shibae</italic> in co-culture.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th/>
<th/>
<th valign="top" align="center" style="border-bottom: thin solid #000000;"><bold>B<sub>7</sub> per cell (mol cell<sup>&#x02212;1</sup>)</bold></th>
</tr>
<tr>
<th/>
<th/>
<th valign="top" align="center"><bold>Exp</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><italic>L. polyedrum</italic></td>
<td valign="top" align="left">ax</td>
<td valign="top" align="center">b. l. d.</td>
</tr>
<tr>
<td valign="top" align="left"><italic>L. polyedrum</italic></td>
<td valign="top" align="left">ax</td>
<td valign="top" align="center">b. l. d.</td>
</tr>
<tr>
<td valign="top" align="left"><italic>L. polyedrum</italic></td>
<td valign="top" align="left">xe</td>
<td valign="top" align="center">4.74 &#x000D7; 10<sup>&#x02212;19</sup></td>
</tr>
<tr>
<td valign="top" align="left"><italic>L. polyedrum</italic></td>
<td valign="top" align="left">xe</td>
<td valign="top" align="center">9.41 &#x000D7; 10<sup>&#x02212;19</sup></td>
</tr>
<tr>
<td valign="top" align="left"><italic>D. shibae</italic>&#x02014;free-living</td>
<td valign="top" align="left">xe</td>
<td valign="top" align="center">b. l. d.</td>
</tr>
<tr>
<td valign="top" align="left"><italic>D. shibae</italic>&#x02014;free-living</td>
<td valign="top" align="left">xe</td>
<td valign="top" align="center">b. l. d.</td>
</tr>
<tr>
<td valign="top" align="left"><italic>D. shibae</italic>&#x02014;attached</td>
<td valign="top" align="left">xe</td>
<td valign="top" align="center">1.71 &#x000D7; 10<sup>&#x02212;19</sup></td>
</tr>
<tr>
<td valign="top" align="left"><italic>D. shibae</italic>&#x02014;attached</td>
<td valign="top" align="left">xe</td>
<td valign="top" align="center">1.89 &#x000D7; 10<sup>&#x02212;19</sup></td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>B<sub>7</sub> per cell (mol cell<sup>&#x02212;1</sup>). Axenic (ax), xenic (xe), below limit of detection (b. l. d.)</italic></p>
</table-wrap-foot>
</table-wrap>
</sec>
<sec>
<title><italic>D. shibae</italic> frequency of attachment on <italic>L. polyedrum</italic></title>
<p>We quantified the attachment of <italic>D. shibae</italic> to <italic>L. polyedrum</italic> cells by counting microscopically the number of attached bacteria to each <italic>L. polyedrum</italic> cell. Because 100 <italic>L. polyedrum</italic> cells were observed the frequency of bacteria per host cell in Figure <xref ref-type="fig" rid="F2">2</xref> gives the relative frequency in percent. Figure <xref ref-type="fig" rid="F2">2</xref> shows that in the V-R culture the average number of <italic>D. shibae</italic> bound to <italic>L. polyedrum</italic> was lower, compared with the V-L culture (<italic>p</italic> &#x0003C; 0.05, Mann-Whitney). In addition, the abundance of free-living <italic>D. shibae</italic> in the V-R culture was lower than in the V-L culture (Figure <xref ref-type="fig" rid="F3">3</xref>; <italic>p</italic> &#x0003C; 0.05, ANOVA).</p>
<fig id="F2" position="float">
<label>Figure 2</label>
<caption><p>Frequency of <italic>D. shibae</italic> cells attached to single <italic>L. polyedrum</italic> cell in semi-continuous culture conditions. <italic>L. polyedrum</italic> in V-R culture (<inline-graphic xlink:href="fmars-05-00274-i0001.tif"/>), and V-L culture (<inline-graphic xlink:href="fmars-05-00274-i0002.tif"/>).</p></caption>
<graphic xlink:href="fmars-05-00274-g0002.tif"/>
</fig>
<fig id="F3" position="float">
<label>Figure 3</label>
<caption><p>Growth of <italic>L. polyedrum</italic> and <italic>D. shibae</italic> under V-R (-&#x02022;-) and V-L (-&#x000B0;-) cultures. <bold>(A)</bold> <italic>L. polyedrum</italic> abundance; red arrows denoted time-points of sampling. <bold>(B)</bold> Free-living <italic>D. shibae</italic> abundance. &#x0002A;<italic>p</italic> &#x0003C; 0.05 (ANOVA).</p></caption>
<graphic xlink:href="fmars-05-00274-g0003.tif"/>
</fig>
</sec>
</sec>
<sec sec-type="discussion" id="s4">
<title>Discussion</title>
<sec>
<title>Limiting concentrations of B<sub>1</sub> and B<sub>12</sub></title>
<p>Our results show that B<sub>1</sub> and B<sub>12</sub> at the lowest concentrations tested limited the growth rate of <italic>L. polyedrum</italic>. The <italic>L. polyedrum</italic> strain examined in this study must possess high-affinity uptake systems for B<sub>1</sub> and B<sub>12</sub> to explain their low <italic>K</italic>s values (Table <xref ref-type="table" rid="T1">1</xref>). Our <italic>K</italic>s estimate for B<sub>12</sub> of 0.53 pM is in the range of values reported by Tang et al. (<xref ref-type="bibr" rid="B56">2010</xref>; Table <xref ref-type="table" rid="T2">2</xref>) for six different phytoplankton species including two dinoflagellate species reported to have the lowest (0.02 pM) and highest <italic>K</italic>s values (13.1 pM) for B<sub>12</sub> in the list. Our <italic>K</italic>s estimate for B<sub>1</sub> of 3.3 pM is lower than the values reported by Tang et al. (<xref ref-type="bibr" rid="B56">2010</xref>; Table <xref ref-type="table" rid="T2">2</xref>) for five species. In their list, the values of the three dinoflagellates ranged from 86 to 131 pM.</p>
<p>The uptake of B<sub>1</sub> and B<sub>12</sub> by phytoplankton communities has been documented in coastal areas (Gobler et al., <xref ref-type="bibr" rid="B25">2007</xref>; Koch et al., <xref ref-type="bibr" rid="B38">2011</xref>, <xref ref-type="bibr" rid="B37">2012</xref>), but the potential for colimitation of B<sub>1</sub> and B<sub>12</sub> has not been reported. Given the slow growth rate of dinoflagellates, it is difficult to imagine that traditional bioassay experiments with natural populations probing vitamin limitation would yield conclusive results for dinoflagellates. But concurrent limitation of vitamins with other compounds have been reported (Panzeca et al., <xref ref-type="bibr" rid="B48">2006</xref>; Bertrand et al., <xref ref-type="bibr" rid="B10">2007</xref>, <xref ref-type="bibr" rid="B9">2011</xref>; Gobler et al., <xref ref-type="bibr" rid="B25">2007</xref>; King et al., <xref ref-type="bibr" rid="B35">2011</xref>; Koch et al., <xref ref-type="bibr" rid="B38">2011</xref>; Bertrand and Allen, <xref ref-type="bibr" rid="B8">2012</xref>).</p>
<p>The limiting concentrations of B<sub>1</sub> and B<sub>12</sub> supporting maximum growth rates of <italic>L. polyedrum</italic> can be compared with measured <italic>in situ</italic> concentrations. In coastal systems dB<sub>12</sub> ranges from undetectable to 87 pM (Sa&#x000F1;udo-Wilhelmy et al., <xref ref-type="bibr" rid="B52">2006</xref>, <xref ref-type="bibr" rid="B51">2012</xref>; Panzeca et al., <xref ref-type="bibr" rid="B47">2009</xref>) and for dB<sub>1</sub> from undetectable to 200 pM (Gobler et al., <xref ref-type="bibr" rid="B25">2007</xref>; Koch et al., <xref ref-type="bibr" rid="B37">2012</xref>, <xref ref-type="bibr" rid="B39">2013</xref>; Sa&#x000F1;udo-Wilhelmy et al., <xref ref-type="bibr" rid="B51">2012</xref>; Suffridge et al., <xref ref-type="bibr" rid="B55">2017</xref>). This comparison suggests that B<sub>1</sub> or B<sub>12</sub> might limit the growth rate of <italic>L. polyedrum</italic> during certain stages of bloom formation. Koch et al. (<xref ref-type="bibr" rid="B36">2014</xref>), measured dissolved B<sub>1</sub> and B<sub>12</sub> concentrations inside and outside of dinoflagellate blooms, and found concentrations higher than the limiting concentrations reported in our study. They also reported that vitamin concentrations inside dinoflagellate blooms were lower than outside of blooms, which pointed to active uptake and the possibility of vitamin limitation. Further field data will have to show if the dinoflagellate bloom development can be limited by vitamin availability in coastal waters that are less eutrophic than their study area.</p>
</sec>
<sec>
<title><italic>L. polyedrum</italic> and <italic>D. shibae</italic> co-culture</title>
<p>Our experiments were planned after having shown B<sub>1</sub> and B<sub>12</sub> auxotrophy of <italic>L. polyedrum</italic>, including experimental evidence that co-cultured bacterial communities could overcome the vitamin limitation without supplying the bacteria with additional organic substrate in the culture medium (Cruz-L&#x000F3;pez and Maske, <xref ref-type="bibr" rid="B18">2016</xref>). Our previous experimental approach could not separate the vitamin auxotrophy of part of the bacterial community from the auxotrophy of <italic>L. polyedrum</italic>. In a new set of experiments, we co-cultured <italic>L. polyedrum</italic> with <italic>D. shibae</italic>, a bacterium reported to produce B<sub>1</sub> and B<sub>12</sub> (Wagner-D&#x000F6;bler et al., <xref ref-type="bibr" rid="B57">2010</xref>). <italic>D. shibae</italic> has been shown to be B<sub>7</sub> auxotroph (Biebl et al., <xref ref-type="bibr" rid="B11">2005</xref>; Wang et al., <xref ref-type="bibr" rid="B58">2014a</xref>) which combined well with <italic>L. polyedrum</italic> that was shown not to be B<sub>7</sub> auxotroph (Cruz-L&#x000F3;pez and Maske, <xref ref-type="bibr" rid="B18">2016</xref>).</p>
<p>In the co-cultures, we calculated B<sub>12</sub> cell quotas based on pB<sub>12</sub> and cell abundances for <italic>L. polyedrum</italic> ranging from 5 &#x000D7; 10<sup>&#x02212;18</sup> to 2 &#x000D7; 10<sup>&#x02212;17</sup> mol cell<sup>&#x02212;1</sup> (Table <xref ref-type="table" rid="T2">2</xref>). These cell quotas are comparable to 4 &#x000D7; 10<sup>&#x02212;22</sup> and 1.7 &#x000D7; 10<sup>&#x02212;18</sup>, the values reported for dinoflagellates by Tang et al. (<xref ref-type="bibr" rid="B56">2010</xref>; Table <xref ref-type="table" rid="T2">2</xref>). Our measured cell quotas show between one and two orders higher cellular B<sub>12</sub> content for <italic>L. polyedrum</italic> than for both types of <italic>D. shibae</italic> phenotypes, attached and free-living. In our results, <italic>L. polyedrum</italic> had lower <italic>K</italic>s but higher cell quotas compared with other dinoflagellate species (Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>); the former might provide an ecological advantage to <italic>L. polyedrum</italic> or partially compensate for the disadvantage of a high cell quota. The cell quota concentrations based on cell volumes are 2&#x02013;3 orders of magnitude lower for <italic>L. polyedrum</italic> cells than for <italic>D. shibae</italic> cells (Table <xref ref-type="table" rid="T1">1</xref>). Panzeca et al. (<xref ref-type="bibr" rid="B47">2009</xref>) quantified the concentration of B<sub>12</sub> during a <italic>L. polyedrum</italic> bloom in a coastal, ranging from 2 to 61 pM, concentrations that should not be limiting for <italic>L. polyedrum. L. polyedrum</italic> abundance was not quantified at the time of B<sub>12</sub> measurements, but at nearby locations at a later date the abundance was shown to be high, ranging from 1 &#x000D7; 10<sup>6</sup> to 6 &#x000D7; 10<sup>6</sup> (cell L<sup>&#x02212;1</sup>) (Pe&#x000F1;a-Manjarrez et al., <xref ref-type="bibr" rid="B50">2009</xref>).</p>
<p>According to Croft et al. (<xref ref-type="bibr" rid="B16">2005</xref>), a minimum of 10 ng L<sup>&#x02212;1</sup> of B<sub>12</sub> is required for growth in culture by most phytoplankton species, while Tang et al. (<xref ref-type="bibr" rid="B56">2010</xref>) showed that HAB species need higher concentrations than non-bloom forming species. Most of the B<sub>12</sub> quantification in the field or in culture studies measured the dissolved form, and only few studies related to dinoflagellates in the field (Carlucci, <xref ref-type="bibr" rid="B13">1970</xref>; Gobler et al., <xref ref-type="bibr" rid="B25">2007</xref>; Panzeca et al., <xref ref-type="bibr" rid="B47">2009</xref>) or in cultures (Croft et al., <xref ref-type="bibr" rid="B16">2005</xref>; Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>; Cruz-L&#x000F3;pez and Maske, <xref ref-type="bibr" rid="B18">2016</xref>). Recently Suffridge et al. (<xref ref-type="bibr" rid="B55">2017</xref>), quantified the particulate fraction for several B-type vitamins in the field and cultured marine bacteria, given previous cell quotas for marine phytoplankton or heterotrophic bacteria are based on uptake rates (reviewed in Droop, <xref ref-type="bibr" rid="B22">2003</xref>; Bonnet et al., <xref ref-type="bibr" rid="B12">2010</xref>).</p>
<p>To quantify the B<sub>12</sub> in the different fractions, we used a highly sensitive enzyme-linked immunosorbent assay (ELISA) able to recognize all B<sub>12</sub> forms (cyanocobalamin, methylcobalamin, hydroxocobalamin, and coenzyme B<sub>12</sub>), but unable to distinguish them individually. The cyanocobalamin produced by <italic>D. shibae</italic> can be used directly by the algal auxotroph without post-modifications (Helliwell et al., <xref ref-type="bibr" rid="B31">2016</xref>). A likely explanation for our co-culture experimental results is that <italic>L. polyedrum</italic> acquired B<sub>1</sub> and B<sub>12</sub> vitamins from <italic>D. shibae</italic> in sufficient quantity to sustain the maximum growth over many generations; however, it had not been shown what <italic>D. shibae</italic> receives in return from <italic>L. polyedrum</italic>. For <italic>D. shibae</italic> to grow together with <italic>L. polyedrum</italic>, it would need organic substrate for biomass formation but in addition also specific compounds because <italic>D. shibae</italic> is auxotroph for B<sub>7</sub>, niacin and 4-amino-benzoic acid (Biebl et al., <xref ref-type="bibr" rid="B11">2005</xref>). The production and release of niacin and 4-amino-benzoic acid by a dinoflagellate host was previously suggested by Wagner-D&#x000F6;bler et al. (<xref ref-type="bibr" rid="B57">2010</xref>) and Wang et al. (<xref ref-type="bibr" rid="B58">2014a</xref>) to explain their co-cultures of <italic>Prorocentrum minimum</italic> CCMP1329 with <italic>D. shibae</italic> in medium lacking B<sub>12</sub> or any of the other essential vitamins mentioned above. However, the dinoflagellate <italic>P. minimum</italic> CCMP1329 is B<sub>7</sub> auxotroph (Wagner-D&#x000F6;bler et al., <xref ref-type="bibr" rid="B57">2010</xref>) and therefore B<sub>7</sub> had to be supplied to the medium. In the case of <italic>L. polyedrum</italic>, B<sub>7</sub> is not required (Cruz-L&#x000F3;pez and Maske, <xref ref-type="bibr" rid="B18">2016</xref>) and the culture medium was not supplemented with B<sub>7</sub>, niacin or 4-amino-benzoic acid. We assume that these organic growth factors could not be provided by the prepared seawater medium. We suggest that these three compounds were provided by <italic>L. polyedrum</italic> in the form of exudates in sufficient quantity to support the growth of the <italic>D. shibae</italic> population. In return, <italic>L. polyedrum</italic> thus promoted the production of B<sub>1</sub> and B<sub>12</sub>. Due to technical limitations, we only measured B<sub>7</sub> in the particulate fraction, but not in the dissolved fraction. Future research should quantify B<sub>7</sub>, niacin or 4-amino-benzoic acid in the dissolved fraction to better define the mutualistic relationship between <italic>D. shibae</italic> and <italic>L. polyedrum</italic> (Figure <xref ref-type="fig" rid="F4">4</xref>).</p>
<fig id="F4" position="float">
<label>Figure 4</label>
<caption><p>Proposed mutualism of <italic>L. polyedrum</italic> and <italic>D. shibae</italic>. Depending on the degree of B<sub>1</sub> and B<sub>12</sub> limitation <italic>L. polyedrum</italic> liberates growth promoters for <italic>D. shibae</italic>, for example, B<sub>7</sub>, niacin and 4-amino-benzoic acid. <italic>D. shibae</italic> responds with an increased tendency to attach to <italic>L. polyedrum</italic> cells and to produce B<sub>1</sub> and B<sub>12</sub>. The red arrows indicate the kinetic between free-living and attached lifestyle of <italic>D. shibae</italic> based on the dissolved pool of B<sub>1</sub> and B<sub>12</sub>.</p></caption>
<graphic xlink:href="fmars-05-00274-g0004.tif"/>
</fig>
<p>On the other hand, the release of B<sub>7</sub> from different phytoplankton species has been documented previously (Bednar and Holm-Hansen, <xref ref-type="bibr" rid="B7">1964</xref>; Carlucci and Bowes, <xref ref-type="bibr" rid="B14">1970a</xref>,<xref ref-type="bibr" rid="B15">b</xref>; Aaronson et al., <xref ref-type="bibr" rid="B1">1971</xref>, <xref ref-type="bibr" rid="B2">1977</xref>), cell quotas for dinoflagellates are based on uptake rates (Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>). Our pB<sub>7</sub> results showed no pB<sub>7</sub> in the <italic>L. polyedrum</italic> axenic culture, whereas in co-culture with <italic>D. shibae, L. polyedrum</italic> we found from 4.74 &#x000D7; 10<sup>&#x02212;19</sup> to 9.41 &#x000D7; 10<sup>&#x02212;19</sup> mol cell<sup>&#x02212;1</sup>. Adjusting to pmol cell<sup>&#x02212;1</sup>, our results are in the range (4.74 &#x000D7; 10<sup>&#x02212;7</sup> to 9.41 &#x000D7; 10<sup>&#x02212;7</sup>) for the cell quotas reported for <italic>Gymnodinium instriatum</italic> L3, and two orders of magnitude higher than those reported for <italic>P. minimum</italic> CCMP696 and <italic>P. minimum</italic> PB3 (Tang et al., <xref ref-type="bibr" rid="B56">2010</xref>).</p>
<p>For marine heterotrophic bacteria, the B<sub>7</sub> production has been inferred, based on their available genomes, or <italic>in situ</italic> transcriptional studies (Luo and Moran, <xref ref-type="bibr" rid="B41">2014</xref>; Sa&#x000F1;udo-Wilhelmy et al., <xref ref-type="bibr" rid="B53">2014</xref>; G&#x000F3;mez-Consarnau et al., <xref ref-type="bibr" rid="B26">2018</xref>). Among the Roseobacter clade, of the 52 Roseobacter genomes analyzed by Luo and Moran (<xref ref-type="bibr" rid="B41">2014</xref>), 30 species were found to be auxotrophs for B<sub>7</sub>, including <italic>D. shibae</italic> (Biebl et al., <xref ref-type="bibr" rid="B11">2005</xref>; Wienhausen et al., <xref ref-type="bibr" rid="B60">2017</xref>; G&#x000F3;mez-Consarnau et al., <xref ref-type="bibr" rid="B26">2018</xref>). Of these 30 Roseobacter species, 13 produce B<sub>1</sub> and B<sub>12</sub>, and 17 only B<sub>12</sub> (Table <xref ref-type="table" rid="T4">4</xref>). In the case of <italic>D. shibae</italic> in co-culture with <italic>L. polyedrum</italic>, we could only detect B<sub>7</sub> in the attached <italic>D. shibae</italic> phenotype, with cell quotas ranging from 1.72 &#x000D7; 10<sup>&#x02212;7</sup> to 1.9 &#x000D7; 10<sup>&#x02212;7</sup> pmol cell<sup>&#x02212;1</sup>.</p>
<table-wrap position="float" id="T4">
<label>Table 4</label>
<caption><p>Select genes for B-vitamin biosynthesis in 30 B<sub>7</sub> auxotroph <italic>Roseobacter</italic> isolate genomes.</p></caption>
<table frame="hsides" rules="groups">
<thead><tr>
<th/>
<th valign="top" align="center"><bold>B<sub>12</sub></bold></th>
<th valign="top" align="center"><bold>B<sub>1</sub></bold></th>
<th valign="top" align="left"><bold>Isolation</bold></th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">Rhodobacterales bacterium KLH11</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left">n. a.</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Oceanibulbus indolifex</italic> HEL45</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left">Seawater 10 m depth</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Roseobacter denitrificans</italic> Och 114</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left">Coastal marine sediments</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Roseobacter litoralis</italic> Och 149</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left">Seaweed</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Roseovarius nubinhibens</italic> ISM</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left">Surface seawater</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Roseobacter</italic> sp. AzwK-3b</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left">n. a.</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Roseovarius</italic> sp. 217</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left">Surface seawater</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Roseovarius</italic> sp. TM1035</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left"><bold>Dinoflagellate:</bold> <italic><bold>Pfiesteria piscicida</bold></italic></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Oceanicola batsensis</italic> HTCC2597</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left">Seawater 10 m depth</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Pelagibaca bermudensis</italic> HTCC2601</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left">Seawater 10 m depth</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Octadecabacter arcticus</italic> 238</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left">n. a.</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Octadecabacter antarcticus</italic> 307</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left">n. a.</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Dinoroseobacter shibae</italic> DFL 12</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="left"><bold>Dinoflagellate:</bold> <italic><bold>Prorocentrum lima</bold></italic></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Ruegeria</italic> sp. TM1040</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left"><bold>Dinoflagellate:</bold> <italic><bold>Pfiesteria piscicida</bold></italic></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Roseobacter</italic> sp. GAl101</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">n. a.</td>
</tr>
<tr>
<td valign="top" align="left">Rhodobacterales bacterium HTCC2083</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">n. a.</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Roseobacter</italic> sp. R2A57</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">Seawater</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Sagittula stellata</italic> E-37</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">Coastal seawater</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Thalassiobium</italic> sp. R2A62</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">n. a.</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Loktanella</italic> sp. SE62</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">decaying <italic>Spartina</italic></td>
</tr>
<tr>
<td valign="top" align="left"><italic>Roseobacter</italic> sp. CCS2</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">Coastal seawater</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Loktanella vestfoldensis</italic> SKA53</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">Seawater 2&#x02013;5 m depth</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Loktanella vestfoldensis</italic> R-9477</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">Microbial mat</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Oceanicola granulosus</italic> HTCC2516</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">Seawater 10 m depth</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Wenxinia marina</italic> HY34</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">Marine sediments</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Jannaschia</italic> sp. CCS1</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">Coastal seawater</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Maritimibacter alkaliphilus</italic> HTCC2654</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">Seawater 10 m depth</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Roseobacter</italic> sp. LE17</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">n. a.</td>
</tr>
<tr>
<td valign="top" align="left">Rhodobacterales bacterium HTCC2150</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">Coastal seawater</td>
</tr>
<tr>
<td valign="top" align="left">Rhodobacterales bacterium HTCC2255</td>
<td valign="top" align="center" style="background-color:#c6e0b4">&#x0221A;</td>
<td valign="top" align="center" style="background-color:#f8ccae">X</td>
<td valign="top" align="left">Coastal seawater 10 m depth</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<p><italic>Presence &#x0221A;, <inline-graphic xlink:href="fmars-05-00274-i0003.tif"/>; absence X, <inline-graphic xlink:href="fmars-05-00274-i0004.tif"/></italic>.</p>
<p><italic>B<sub>7</sub>, biotin synthase; B<sub>1</sub>, thiamine synthase; B<sub>12</sub>, cobalamin synthase (extracted from Luo and Moran, <xref ref-type="bibr" rid="B41">2014</xref>). Isolation source extracted from <ext-link ext-link-type="uri" xlink:href="http://www.roseobase.org">www.roseobase.org</ext-link> and <ext-link ext-link-type="uri" xlink:href="https://genome.jgi.doe.gov">https://genome.jgi.doe.gov</ext-link>. n. a., Not available</italic>.</p>
</table-wrap-foot>
</table-wrap>
<p>In a recent study, Suffridge et al. (<xref ref-type="bibr" rid="B55">2017</xref>), developed a method to quantify B-type vitamins in the dissolved and particulate fraction using cultures of marine bacteria. They obtained cell quotas of B<sub>7</sub> for <italic>Synechococcus</italic> strain CC9311 (9.9 &#x000D7; 10<sup>&#x02212;6</sup> &#x000B1; 8.1 &#x000D7; 10<sup>&#x02212;6</sup> mol cell<sup>&#x02212;1</sup>), and for <italic>Vibrio</italic> AND4 (2.47 &#x000D7; 10<sup>&#x02212;6</sup> &#x000B1; 1.36 &#x000D7; 10<sup>&#x02212;6</sup> mol cell<sup>&#x02212;1</sup>). In our cultures, surprisingly the free-living <italic>D. shibae</italic> did not contain pB<sub>7</sub>. As was shown by Luo and Moran (<xref ref-type="bibr" rid="B41">2014</xref>), the B<sub>7</sub> auxotrophy is a widespread phenomenon among the Roseobacter clade, although this auxotrophy is not always related to a symbiotic lifestyle with phytoplankton, which needs to be clarified with further culture and genomic studies.</p>
</sec>
<sec>
<title><italic>D. shibae</italic> frequency of attachment on <italic>L. polyedrum</italic></title>
<p>Eukaryotic phytoplankton and heterotrophic bacteria are interacting to fulfill the need for vitamins of the former and the need of excreted organic substrate of the latter. Different modes of exchange of vitamins and organic substrate are possible; vitamin-producing bacterial epibionts can be attached to the vitamin-auxotroph cells, or the vitamin-producing and consuming cells can be freely suspended, and the exchange of the dissolved compounds is maintained by turbulent and molecular diffusion at sufficiently high rates to supply the metabolic demand of the auxotrophs (Croft et al., <xref ref-type="bibr" rid="B16">2005</xref>; Droop, <xref ref-type="bibr" rid="B23">2007</xref>).</p>
<p>We used vitamin-replete and vitamin-limited cultures of <italic>L. polyedrum</italic> to produce contrasting host-bacterial culture conditions assuming that the V-L condition would promote the cellular attachment of bacteria and host. The frequency of <italic>D. shibae</italic> attached to <italic>L. polyedrum</italic> was higher under V-L condition compared to V-R condition (Figure <xref ref-type="fig" rid="F2">2</xref>; Table <xref ref-type="supplementary-material" rid="SM1">S3</xref>; Mann-Whitney, <italic>p</italic> &#x0003C; 0.005). When V-L cultures returned to V-R condition, the frequency of attachment reduced to average abundance. Higher attachment frequency under V-L condition suggests a more intense exchange of metabolites under growth culture conditions where this exchange would be essential to the growth of either population.</p>
<p>Because no carbon substrates were added to the culture medium that could have supported the growth of <italic>D. shibae</italic>, our results suggest that <italic>D. shibae</italic> was able to use dinoflagellate photosynthates as a carbon source in return for supplying the host with vitamin B<sub>1</sub> and B<sub>12</sub>. As pointed out above <italic>L. polyedrum</italic> might have provided more specific growth enhancing substrates to <italic>D. shibae</italic>. Although in media without added vitamin <italic>D. shibae</italic> was found to be attached more frequently to <italic>L. polyedrum</italic> cells suggesting a synergy between both species, it leaves the question open about the mechanism of delivery. Vitamin could have either been exchanged in the dissolved form originating from free-living partners or by a more direct exchange of metabolites when both cell types are physically attached. Interestingly, in similar experiments but with a natural community of microbes instead of <italic>D. shibae</italic>, the frequency of attachment of microbes to <italic>L. polyedrum</italic> did not increase but the abundance of free-living bacteria in the co-culture increased (Cruz-L&#x000F3;pez and Maske, <xref ref-type="bibr" rid="B18">2016</xref>). For co-cultures of <italic>L. polyedrum</italic> with bacterial communities, the vitamin exchange and balance is more difficult to analyze because an unknown part of the bacterial community is also B<sub>12</sub> auxotroph.</p>
<p>During the co-culture of <italic>L. polyedrum</italic> and <italic>D. shibae</italic>, we quantified the free-living and attached <italic>D. shibae</italic> cells in V-R and V-L cultures, and observed that the abundance of free-living <italic>D. shibae</italic> in the V-R culture was lower than in V-L culture (Figure <xref ref-type="fig" rid="F3">3B</xref>; ANOVA, <italic>p</italic> &#x0003E; 0.05), and that <italic>L. polyedrum</italic> in the V-R culture was lightly colonized in comparison with the V-L culture (Figure <xref ref-type="fig" rid="F2">2</xref>; Table <xref ref-type="supplementary-material" rid="SM1">S3</xref>; Mann-Whitney, <italic>p</italic> &#x0003C; 0.005). These two alternative lifestyles of <italic>D. shibae</italic> have been documented before (Biebl et al., <xref ref-type="bibr" rid="B11">2005</xref>; Wagner-D&#x000F6;bler et al., <xref ref-type="bibr" rid="B57">2010</xref>; Wang et al., <xref ref-type="bibr" rid="B58">2014a</xref>), and are controlled by quorum sensing (QS) <italic>via</italic> CtrA signal transduction protein (Patzel et al., <xref ref-type="bibr" rid="B49">2013</xref>; Wang et al., <xref ref-type="bibr" rid="B59">2014b</xref>). Note, however, that increased bacterial attachment frequency under vitamin limitation coincided with an increased abundance of free-living bacteria, further work will be required to confirm that this phenotype is driven by nutrient exchange requirements.</p>
</sec>
</sec>
<sec sec-type="conclusions" id="s5">
<title>Conclusion</title>
<p>Our data show that the B<sub>1</sub> and B<sub>12</sub> limiting concentrations for <italic>L. polyedrum</italic> growth are lower than typical concentrations found in coastal waters. In vitamin-depleted cultures of <italic>L. polyedrum</italic>, the limitation could be overcome by co-culture with <italic>D. shibae</italic>, because the bacterium was likely able to provide sufficient quantities of B<sub>1</sub> and B<sub>12</sub> to support the growth of <italic>L. polyedrum</italic>. In return, <italic>D. shibae</italic> was likely provided sufficient exudates by <italic>L. polyedrum</italic> to support its growth. Also, the mutualism between both partners may have extended beyond the supply of B<sub>1</sub> and B<sub>12</sub> and dissolved organic carbon. Since <italic>D. shibae</italic> is auxotrophic for B<sub>7</sub>, niacin and 4-amino-benzoic acid, <italic>L. polyedrum</italic> needed to provide sufficient quantities of these compounds to overcome <italic>D. shibae</italic>&#x00027;s auxotrophy. This mutualism was probably helped by the phenotypic ability of <italic>D. shibae</italic> to choose between a free-living or attached lifestyle, where the attached lifestyle could serve as a reservoir of B<sub>7</sub> within this isogenic population.</p>
</sec>
<sec id="s6">
<title>Author contributions</title>
<p>RC-L conceived, performed, and wrote the article. HM conceived and wrote the article. KY and NH performed and wrote the article.</p>
<sec>
<title>Conflict of interest statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</sec>
</body>
<back>
<ack><p>This work was partially supported by the National Council of Science and Technology (CONACyT-M&#x000E9;xico) project CB-2008-01 106003 (to HM), a Ph.D. scholarship, and a Postdoctoral fellowship for overseas to RCL (CONACyT-M&#x000E9;xico). Additionally, we would like to thank Avery O. Tatters (University of Southern California) for kindly providing the <italic>L. polyedrum</italic> strain and Prof. Carl J. Carrano (San Diego State University) for allowing us to use his laboratory to prepare samples. We would like to show our gratitude to Sharon and Christopher A. Rhodes, the owners of Drug Delivery Experts LLC., for allowing us to use their facility to generate LC-MS data. Finally, we would like to thank the reviewers for constructive comments and suggestions.</p>
</ack>
<sec sec-type="supplementary-material" id="s7">
<title>Supplementary material</title>
<p>The Supplementary Material for this article can be found online at: <ext-link ext-link-type="uri" xlink:href="https://www.frontiersin.org/articles/10.3389/fmars.2018.00274/full#supplementary-material">https://www.frontiersin.org/articles/10.3389/fmars.2018.00274/full#supplementary-material</ext-link></p>
<supplementary-material xlink:href="Data_Sheet_1.PDF" id="SM1" mimetype="application/pdf" xmlns:xlink="http://www.w3.org/1999/xlink"/>
</sec>
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