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<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Microbiol.</journal-id>
<journal-title>Frontiers in Microbiology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Microbiol.</abbrev-journal-title>
<issn pub-type="epub">1664-302X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fmicb.2020.591021</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Microbiology</subject>
<subj-group>
<subject>Mini Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>The Rationale for Using Bacteriophage to Treat and Prevent Periprosthetic Joint Infections</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name><surname>Van Belleghem</surname> <given-names>Jonas D.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/623850/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Manasherob</surname> <given-names>Robert</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
</contrib>
<contrib contrib-type="author">
<name><surname>Mi&#x0229;dzybrodzki</surname> <given-names>Ryszard</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/361462/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Rog&#x00F3;&#x017C;</surname> <given-names>Pawe&#x0142;</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/1050555/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>G&#x00F3;rski</surname> <given-names>Andrzej</given-names></name>
<xref ref-type="aff" rid="aff3"><sup>3</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/360356/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Suh</surname> <given-names>Gina A.</given-names></name>
<xref ref-type="aff" rid="aff4"><sup>4</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/948224/overview"/>
</contrib>
<contrib contrib-type="author">
<name><surname>Bollyky</surname> <given-names>Paul L.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/662289/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name><surname>Amanatullah</surname> <given-names>Derek F.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/940096/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Division of Infectious Diseases and Geographic Medicine, Department of Medicine, Stanford University</institution>, <addr-line>Stanford, CA</addr-line>, <country>United States</country></aff>
<aff id="aff2"><sup>2</sup><institution>Department of Orthopaedic Surgery, Stanford University</institution>, <addr-line>Stanford, CA</addr-line>, <country>United States</country></aff>
<aff id="aff3"><sup>3</sup><institution>Ludwik Hirszfeld Institute of Immunology and Experimental Therapy, Polish Academy of Sciences</institution>, <addr-line>Wroc&#x0142;aw</addr-line>, <country>Poland</country></aff>
<aff id="aff4"><sup>4</sup><institution>Mayo Clinic</institution>, <addr-line>Rochester, MN</addr-line>, <country>United States</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Karsten Becker, University Medicine Greifswald, Germany</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Sandra Patricia Morales, Phage Solutions, Sydney, NSW, Australia; Devendra Dusane, The Ohio State University, United States</p></fn>
<corresp id="c001">&#x002A;Correspondence: Derek F. Amanatullah, <email>dfa@stanford.edu</email></corresp>
<fn fn-type="other" id="fn002"><p><sup>&#x2020;</sup>These authors have contributed equally to this work</p></fn>
<fn fn-type="other" id="fn004"><p>This article was submitted to Antimicrobials, Resistance and Chemotherapy, a section of the journal Frontiers in Microbiology</p></fn>
</author-notes>
<pub-date pub-type="epub">
<day>21</day>
<month>12</month>
<year>2020</year>
</pub-date>
<pub-date pub-type="collection">
<year>2020</year>
</pub-date>
<volume>11</volume>
<elocation-id>591021</elocation-id>
<history>
<date date-type="received">
<day>03</day>
<month>08</month>
<year>2020</year>
</date>
<date date-type="accepted">
<day>24</day>
<month>11</month>
<year>2020</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2020 Van Belleghem, Manasherob, Mi&#x0229;dzybrodzki, Rog&#x00F3;&#x017C;, G&#x00F3;rski, Suh, Bollyky and Amanatullah.</copyright-statement>
<copyright-year>2020</copyright-year>
<copyright-holder>Van Belleghem, Manasherob, Mi&#x0229;dzybrodzki, Rog&#x00F3;&#x017C;, G&#x00F3;rski, Suh, Bollyky and Amanatullah</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>Prosthetic joint infection (PJI) is a devastating complication after a joint replacement. PJI and its treatment have a high monetary cost, morbidity, and mortality. The lack of success treating PJI with conventional antibiotics alone is related to the presence of bacterial biofilm on medical implants. Consequently, surgical removal of the implant and prolonged intravenous antibiotics to eradicate the infection are necessary prior to re-implanting a new prosthetic joint. Growing clinical data shows that bacterial predators, called bacteriophages (phages), could be an alternative treatment strategy or prophylactic approach for PJI. Phages could further be exploited to degrade biofilms, making bacteria more susceptible to antibiotics and enabling potential combinatorial therapies. Emerging research suggests that phages may also directly interact with the innate immune response. Phage therapy may play an important, and currently understudied, role in the clearance of PJI, and has the potential to treat thousands of patients who would either have to undergo revision surgery to attempt to clear an infections, take antibiotics for a prolonged period to try and suppress the re-emerging infection, or potentially risk losing a limb.</p>
</abstract>
<kwd-group>
<kwd>periprosthetic joint infection</kwd>
<kwd>phage (bacteriophage)</kwd>
<kwd>treatment</kwd>
<kwd>biofilm</kwd>
<kwd>immune system</kwd>
</kwd-group>
<counts>
<fig-count count="2"/>
<table-count count="1"/>
<equation-count count="0"/>
<ref-count count="137"/>
<page-count count="10"/>
<word-count count="0"/>
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</article-meta>
</front>
<body>
<sec id="S1">
<title>Introduction</title>
<p>Joint replacement is a life-enhancing procedure for millions of people around the world. Successful joint replacement improves quality of life by relieving pain as well as restoring function and independence (<xref ref-type="bibr" rid="B36">Giori et al., 2018</xref>). It is projected that by 2030 there will be approximately 500,000 hip and 3.5 million knee replacements performed annually in the United States alone (<xref ref-type="bibr" rid="B55">Kurtz et al., 2007</xref>). The vast majority of patients undergoing joint replacements experience near pain-free function, but an unfortunate minority experience pain and ultimately require additional surgery (<xref ref-type="bibr" rid="B85">Mortazavi et al., 2011</xref>). The etiologies of joint replacement failure include aseptic failures from loosening at the bone-cement, cement-implant, or bone-implant interfaces, fracture of the bone or implant, wear debris from the articulation, or poor implant position resulting in joint instability (<xref ref-type="bibr" rid="B86">Mulhall et al., 2006</xref>). However, septic failure (i.e., periprosthetic joint infection, PJI) is the most feared and often times the most common reason for joint replacement failure (<xref ref-type="bibr" rid="B121">Tande and Patel, 2014</xref>).</p>
<p>Periprosthetic joint infection is the leading cause of failure for knee replacements and the third leading cause for failure in hip replacements, accounting for between 15 and 25% of all revision surgeries (<xref ref-type="bibr" rid="B50">Kamath et al., 2015</xref>). Nearly 11,000 patients are affected by PJI yearly in the United States alone, costing over &#x0024;1.6 billion in 2020 (<xref ref-type="bibr" rid="B56">Kurtz et al., 2012</xref>; <xref ref-type="bibr" rid="B50">Kamath et al., 2015</xref>). PJI can be categorized in three groups based on the timing of onset. Early PJI is classified when the infection occurs within 3 months after surgery, where delayed PJI occurs between 3 and 24 months after surgery. Late PJI is categorized when the PJI develops 24 months after the surgery occurred. Common signs and symptoms include swelling, redness, and pain localized to the joint, incisional erythema and/or drainage, as well as fever (<xref ref-type="bibr" rid="B14">Berbari et al., 1998</xref>; <xref ref-type="bibr" rid="B17">Bongartz et al., 2008</xref>; <xref ref-type="bibr" rid="B104">Ravi et al., 2012</xref>; <xref ref-type="bibr" rid="B123">Taylor et al., 2012</xref>).</p>
<p>During PJI, bacteria bound to an implant survive the administration of antibiotics by forming an antibiotic-tolerant biofilm, an extracellular polymeric substance of DNA, proteins, and polysaccharides (<xref ref-type="bibr" rid="B32">Fauvart et al., 2011</xref>; <xref ref-type="bibr" rid="B128">Urish et al., 2016</xref>). The subsequent treatment of PJI requires the removal of these biofilm contaminated implants (i.e., one- or two-stage revision surgery) in addition to the administration of antibiotics. The cost associated with each of these revisions is more than &#x0024;25,000 and is associated with a significant morbidity as well as a one year mortality greater than 10% (<xref ref-type="bibr" rid="B137">Zmistowski et al., 2013</xref>; <xref ref-type="bibr" rid="B50">Kamath et al., 2015</xref>). Despite being the focus of research efforts for many years, treatment failure of PJI can be high with failure rates up between 20 and 50% when the implant is retained (<xref ref-type="bibr" rid="B96">Peel et al., 2011</xref>; <xref ref-type="bibr" rid="B88">Namba et al., 2013</xref>; <xref ref-type="bibr" rid="B102">Pourzal et al., 2016</xref>; <xref ref-type="bibr" rid="B115">Song et al., 2018</xref>).</p>
<p>Although PJI can occur in any patient, certain risk factors increase the risk of PJI. Obesity (body mass index, BMI &#x003E; 35 kg/m<sup>2</sup>) was generally brought forth as a risk factor but in recent years this has been brought into question (<xref ref-type="bibr" rid="B36">Giori et al., 2018</xref>). Additional known factors are rheumatoid arthritis, immunosuppression, and malignancy (<xref ref-type="bibr" rid="B14">Berbari et al., 1998</xref>; <xref ref-type="bibr" rid="B17">Bongartz et al., 2008</xref>; <xref ref-type="bibr" rid="B46">J&#x00E4;msen et al., 2009</xref>; <xref ref-type="bibr" rid="B96">Peel et al., 2011</xref>; <xref ref-type="bibr" rid="B104">Ravi et al., 2012</xref>; <xref ref-type="bibr" rid="B123">Taylor et al., 2012</xref>; <xref ref-type="bibr" rid="B102">Pourzal et al., 2016</xref>). Several studies associate PJI with poor glucose control at surgery, whereby diabetes mellitus is used as a surrogate (<xref ref-type="bibr" rid="B70">Malinzak et al., 2009</xref>; <xref ref-type="bibr" rid="B22">Cazanave et al., 2013</xref>; <xref ref-type="bibr" rid="B88">Namba et al., 2013</xref>; <xref ref-type="bibr" rid="B102">Pourzal et al., 2016</xref>). Besides disease-associated risk factors, peri-operative risk factors play an important role as well. One study has shown that hinged-knee prostheses are more frequently infected than standard replacements (<xref ref-type="bibr" rid="B101">Poss et al., 1984</xref>; <xref ref-type="bibr" rid="B6">Amanatullah et al., 2015</xref>). Additionally, postoperative complications associated with an increased risk of PJI include hematoma, superficial surgical site infection, wound drainage, and wound dehiscence (<xref ref-type="bibr" rid="B14">Berbari et al., 1998</xref>; <xref ref-type="bibr" rid="B103">Pulido et al., 2008</xref>; <xref ref-type="bibr" rid="B8">Aslam et al., 2010</xref>; <xref ref-type="bibr" rid="B96">Peel et al., 2011</xref>). Wound closure is critical, as open wounds or poorly apposed skin will more rapidly lead to bacterial colonization and subsequent infection.</p>
<p>Despite the existing treatment strategies for PJI such as surgical debridement and use of local and systemic antibiotics or the use of antimicrobial coatings and texturing, the presence of biofilm and the rise of antibiotic resistance limits the effectiveness of current treatment modalities. The use of bacteriophages (a.k.a., phages), viruses that specifically target bacteria, represents an alternative to therapeutic and preventative models. Understanding phage therapy begins with understanding the bacterial pathogens involved in PJI and how phage therapy can augment current treatment or prophylactic protocols.</p>
</sec>
<sec id="S2">
<title>Bacterial Pathogenesis of PJI</title>
<p><xref ref-type="bibr" rid="B117">Southwood et al. (1985)</xref> showed that most PJIs occurring within the first year are initiated by microorganisms introduced at the time of surgery (<xref ref-type="bibr" rid="B100">Popa and Dagan, 2011</xref>). This is often correlated with longer operation times (<xref ref-type="bibr" rid="B98">Peersman et al., 2006</xref>). Bacterial contamination occurs through either direct contact or aerosolized contamination of the prosthesis or periprosthetic tissues. Subsequently microorganisms begin colonizing the surface of the implant.</p>
<p><italic>Staphylococcus</italic> is the predominant bacteria associated with PJIs and it likely seeds the joint as the implant crosses the skin (<xref ref-type="table" rid="T1">Table 1</xref>; <xref ref-type="bibr" rid="B12">Barber&#x00E1;n, 2006</xref>; <xref ref-type="bibr" rid="B60">Laffer et al., 2006</xref>; <xref ref-type="bibr" rid="B82">Montanaro et al., 2011</xref>). Gram-positive bacteria, including <italic>Staphylococcus aureus</italic> and coagulase-negative <italic>Staphylococcus</italic> (CNS) infect between 50 and 60% of the implants (<xref ref-type="bibr" rid="B127">Tsukayama et al., 1996</xref>; <xref ref-type="bibr" rid="B87">Murdoch et al., 2001</xref>; <xref ref-type="bibr" rid="B111">Sendi et al., 2011</xref>). Other pathogens play an important role in PJI, including <italic>Streptococcus</italic> species, <italic>Enterococcus</italic>, and aerobic Gram-negative bacilli (<xref ref-type="table" rid="T1">Table 1</xref>; <xref ref-type="bibr" rid="B25">Chodos and Johnson, 2009</xref>; <xref ref-type="bibr" rid="B61">Lee et al., 2010</xref>; <xref ref-type="bibr" rid="B106">Rodr&#x00ED;guez et al., 2010</xref>). Only a few contaminating microorganisms are needed to establish an infection and even fewer to establish a PJI. In a rabbit model, 10<sup>4</sup> colony forming units (CFU) of <italic>S. aureus</italic> will create an infection, but when an implant is present less than 10<sup>2</sup> CFU will create a PJI (<xref ref-type="bibr" rid="B117">Southwood et al., 1985</xref>). CNS are ubiquitous members of the human microbiome found on the skin with the most frequently identified member being <italic>S. epidermidis</italic> (<xref ref-type="bibr" rid="B126">Tripathi et al., 2020</xref>). Although less common, <italic>Enterococcal</italic> species account for 12&#x2013;15% of early-onset PJI often as part of a polymicrobial infection (<xref ref-type="bibr" rid="B13">Bengtson and Knutson, 1991</xref>; <xref ref-type="bibr" rid="B14">Berbari et al., 1998</xref>; <xref ref-type="bibr" rid="B26">Cobo et al., 2011</xref>; <xref ref-type="bibr" rid="B95">Peel et al., 2012b</xref>; <xref ref-type="bibr" rid="B121">Tande and Patel, 2014</xref>).</p>
<table-wrap position="float" id="T1">
<label>TABLE 1</label>
<caption><p>Overview of the most common bacterial pathogens isolated form prosthetic joint infections and their available phages for therapeutic purposes.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<td valign="top" align="left">Infectious bacteria</td>
<td valign="top" align="center">Occurrence</td>
<td valign="top" align="center">Number of phages available (according to NCBI)</td>
<td valign="top" align="left">Reference of bacterial infections</td>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><italic>Staphylococcus aureus</italic></td>
<td valign="top" align="center">++++</td>
<td valign="top" align="center">145</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B14">Berbari et al., 1998</xref>, <xref ref-type="bibr" rid="B15">Berbari et al., 2010</xref>; <xref ref-type="bibr" rid="B71">Marculescu et al., 2006</xref>; <xref ref-type="bibr" rid="B109">Sch&#x00E4;fer et al., 2008</xref>; <xref ref-type="bibr" rid="B16">Biring et al., 2009</xref>; <xref ref-type="bibr" rid="B61">Lee et al., 2010</xref>; <xref ref-type="bibr" rid="B112">Shukla et al., 2010</xref>; <xref ref-type="bibr" rid="B52">Kim et al., 2011</xref>; <xref ref-type="bibr" rid="B57">Kusuma et al., 2011</xref>; <xref ref-type="bibr" rid="B68">Mahmud et al., 2012</xref>; <xref ref-type="bibr" rid="B94">Peel et al., 2012a</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Coagulase negative <italic>Staphylococcus</italic></td>
<td valign="top" align="center">++++</td>
<td/>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B14">Berbari et al., 1998</xref>, <xref ref-type="bibr" rid="B15">Berbari et al., 2010</xref>; <xref ref-type="bibr" rid="B71">Marculescu et al., 2006</xref>; <xref ref-type="bibr" rid="B109">Sch&#x00E4;fer et al., 2008</xref>; <xref ref-type="bibr" rid="B16">Biring et al., 2009</xref>; <xref ref-type="bibr" rid="B61">Lee et al., 2010</xref>; <xref ref-type="bibr" rid="B112">Shukla et al., 2010</xref>; <xref ref-type="bibr" rid="B52">Kim et al., 2011</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Streptococcus species</italic></td>
<td valign="top" align="center">+++</td>
<td valign="top" align="center">55</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B14">Berbari et al., 1998</xref>, <xref ref-type="bibr" rid="B15">Berbari et al., 2010</xref>; <xref ref-type="bibr" rid="B71">Marculescu et al., 2006</xref>; <xref ref-type="bibr" rid="B109">Sch&#x00E4;fer et al., 2008</xref>; <xref ref-type="bibr" rid="B16">Biring et al., 2009</xref>; <xref ref-type="bibr" rid="B61">Lee et al., 2010</xref>; <xref ref-type="bibr" rid="B112">Shukla et al., 2010</xref>; <xref ref-type="bibr" rid="B52">Kim et al., 2011</xref>; <xref ref-type="bibr" rid="B57">Kusuma et al., 2011</xref>; <xref ref-type="bibr" rid="B68">Mahmud et al., 2012</xref>; <xref ref-type="bibr" rid="B94">Peel et al., 2012a</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Enterococcus species</italic></td>
<td valign="top" align="center">++</td>
<td valign="top" align="center">40</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B109">Sch&#x00E4;fer et al., 2008</xref>; <xref ref-type="bibr" rid="B61">Lee et al., 2010</xref>; <xref ref-type="bibr" rid="B112">Shukla et al., 2010</xref>; <xref ref-type="bibr" rid="B52">Kim et al., 2011</xref>; <xref ref-type="bibr" rid="B94">Peel et al., 2012a</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Pseudomonas aeruginosa</italic></td>
<td valign="top" align="center">+++</td>
<td valign="top" align="center">212</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B15">Berbari et al., 2010</xref>; <xref ref-type="bibr" rid="B61">Lee et al., 2010</xref>; <xref ref-type="bibr" rid="B112">Shukla et al., 2010</xref>; <xref ref-type="bibr" rid="B57">Kusuma et al., 2011</xref>; <xref ref-type="bibr" rid="B68">Mahmud et al., 2012</xref>; <xref ref-type="bibr" rid="B94">Peel et al., 2012a</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Escherichia coli</italic></td>
<td valign="top" align="center">++</td>
<td valign="top" align="center">247</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B16">Biring et al., 2009</xref>; <xref ref-type="bibr" rid="B61">Lee et al., 2010</xref>; <xref ref-type="bibr" rid="B57">Kusuma et al., 2011</xref>; <xref ref-type="bibr" rid="B68">Mahmud et al., 2012</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Acinetobacter baumannii</italic></td>
<td valign="top" align="center">+</td>
<td valign="top" align="center">59</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B52">Kim et al., 2011</xref>)</td>
</tr>
<tr>
<td valign="top" align="left"><italic>Klebsiella pneumoniae</italic></td>
<td valign="top" align="center">+</td>
<td valign="top" align="center">94</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B19">Cano et al., 2020</xref>)</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>At times a causative bacterial pathogen cannot be isolated during PJI. The inability to grow a pathogen in laboratory culture can be attributed to prior antimicrobial treatment, inadequate use of available microbiological methods, or an inability to detect and recognized the pathogen using currently available diagnostic methods (<xref ref-type="bibr" rid="B121">Tande and Patel, 2014</xref>). Clearly, identifying a bacterial pathogen is critical when employing phage therapy to treat or prevent PJI. In some cases, isolation of a bacterial pathogen from the intraoperative swab may enable to prepare an active individualized phage formulation.</p>
<p>Another mechanism of establishing a PJI is the contiguous spread of infection from an adjacent site, called hematogenous seeding (<xref ref-type="bibr" rid="B121">Tande and Patel, 2014</xref>). Several studies showed that peri-operative infections at a distant site, including urinary and respiratory tract, are associated with an increased risk of PJI (<xref ref-type="bibr" rid="B14">Berbari et al., 1998</xref>; <xref ref-type="bibr" rid="B97">Peersman et al., 2001</xref>; <xref ref-type="bibr" rid="B103">Pulido et al., 2008</xref>). This may be the result of transient bacteremia from the distant infection site during a high-risk time period. Ultimately, however, PJI originating from remote sites of infection are rare (<xref ref-type="bibr" rid="B100">Popa and Dagan, 2011</xref>).</p>
</sec>
<sec id="S3">
<title>Bacterial Biofilm</title>
<p>Biofilm is part of the bacterial lifecycle in PJI (<xref ref-type="fig" rid="F1">Figure 1</xref>). Biofilms are composed of an extracellular matrix made from exopolysaccharides, proteins, teichoic acids, lipids, and extracellular DNA (<xref ref-type="bibr" rid="B7">Arciola et al., 2012</xref>). Complex communities of bacteria are engulfed in this extracellular matrix. These communities can be mono- or polymicrobial. One of the consequences of biofilm formation during PJI is the formation of a bacterial reservoir that often leads to symptomatic but non-culturable infection, recurrent or persistent infection, or infectious spread via emboli (i.e., part of the biofilm migrates through the blood) (<xref ref-type="bibr" rid="B10">Azeredo and Sutherland, 2008</xref>).</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption><p>Phage induced immune responses. A variety of immune cells can recognize and interact with phages. (1) Phages are recognized by a currently unknown cell receptor. (2) This leads to the internalization of the phage where it will end up in the endosome. (3) Once present in the endosome, the phage gets degraded and its genetic content can either be recognized by TLR9 (dsDNA) or by TLR3 (dsRNA). (4) The activation of these immune receptors will lead to a signaling cascade and the expression of type I interferon (IFN).</p></caption>
<graphic xlink:href="fmicb-11-591021-g001.tif"/>
</fig>
<p>The growth of a biofilm is not static but occurs through multiple stages. Starting with the attachment of the bacterial cell to a surface, followed by the initial growth on the surface, maturation of the biofilm, and finally embolization. In the end, the mature biofilm has a multicellular non-homogeneous structure wherein bacteria communicate with each other through quorum sensing. Quorum sensing make use of chemical signals to help bacteria communicate, coordinate, and cooperate. Quorum is the critical density needed to establish a biofilm colony and express virulence (<xref ref-type="bibr" rid="B79">Miller and Bassler, 2001</xref>; <xref ref-type="bibr" rid="B89">Ng and Bassler, 2009</xref>). Quorum sensing is a positive feed-forward loop which stimulates population-based gene expression (<xref ref-type="bibr" rid="B110">Seed et al., 1995</xref>; <xref ref-type="bibr" rid="B107">Rutherford and Bassler, 2012</xref>). Both Gram-negative and Gram-positive bacteria utilize these quorum sensing strategies to facilitate intraspecies communication. Additionally, due to the conserved nature of the quorum signal mechanism, inter-species communication also occurs providing a plausible explanation for cooperative polymicrobial biofilms (<xref ref-type="bibr" rid="B83">Mooney et al., 2018</xref>).</p>
<p>Bacterial sub-populations have different functions that ultimately support the whole biofilm. In this biofilm state, bacteria are protected from antimicrobials and the immune system (<xref ref-type="bibr" rid="B31">Donlan and Costerton, 2002</xref>). This is partially due to the physical separation of the bacteria from the antimicrobials or the immune cells, but also because bacteria are in a metabolic inactive state, called persistence (<xref ref-type="bibr" rid="B30">del Pozo and Patel, 2007</xref>; <xref ref-type="bibr" rid="B81">Molina-Manso et al., 2013</xref>). This makes the treatment of PJI with conventional antimicrobials very difficult, mandating surgical intervention, including the removal of the prothesis, to achieve a cure. Some antimicrobial agents have an effect against biofilm-resident bacteria such as rifampicin, but ultimately resistance frequently still occurs (<xref ref-type="bibr" rid="B75">Maudsdotter et al., 2019</xref>). Alternatively, bacteriophages, or their derived proteins can be exploited to treat biofilms.</p>
</sec>
<sec id="S4">
<title>Bacteriophage &#x2013; A Bacterial Predator</title>
<p>Phages, viruses that specifically target and infect bacterial cells, can be exploited to treat biofilms in PJI. Phages consist either of DNA or RNA which is encapsulated in a protein coat called a capsid (<xref ref-type="bibr" rid="B131">van Regenmortel, 1992</xref>). Bacteriophages are the most abundant biological entity on the world and occur everywhere in the biosphere. They have colonized even such forbidding habitats as volcanic hot springs. Their main habitats are the oceans and terrestrial topsoil (<xref ref-type="bibr" rid="B3">Ackermann, 2011</xref>). Phage particles can be tailed, polyhedral, filamentous, or pleiomorphic (<xref ref-type="bibr" rid="B18">Calendar, 2006</xref>; <xref ref-type="bibr" rid="B2">Ackermann, 2009</xref>). Tailed phages, representing over 96% of all known phage species, constitute the order <italic>Caudovirales</italic> with three families, characterized by contractile (<italic>Myoviridae</italic>), long and non-contractile (<italic>Siphoviridae</italic>), or short and non-contractile (<italic>Podoviridae</italic>) tails (<xref ref-type="bibr" rid="B3">Ackermann, 2011</xref>).</p>
<p>The most common phage life cycles are the lytic and lysogenic life cycle. In the lytic life cycle, the phage genome exists within the host but outside the host genome. Lytic or virulent phages repeat a cycle in which self-proliferation is synchronous with the destruction of bacteria (i.e., the lytic cycle or the virulent infection) (<xref ref-type="bibr" rid="B74">Matsuzaki et al., 2005</xref>). In this stage, gene expression, genome replication, and morphogenesis occurs (i.e., the formation of the genomes and capsids and the packing of the genomes in the capsids) (<xref ref-type="bibr" rid="B1">Ackermann, 1998</xref>). Lysogenic or temperate phages, can remain dormant in the host through integration of its genome in the bacterial genome, called a prophage, replicating along with the host until they are triggered into a lytic lifecycle. For most lysogens this trigger entails DNA damage, which can be triggered by a multitude of stimuli such as antibiotics, reactive oxygen species or UV (<xref ref-type="bibr" rid="B1">Ackermann, 1998</xref>; <xref ref-type="bibr" rid="B132">Weinbauer, 2004</xref>).</p>
<p>The biological characteristics of phages make them ideal for treating bacterial infections. Their lytic activity, auto-dosing, low inherent toxicity, minimal disruption of normal flora, narrow potential for inducing resistance, lack of cross-resistance with antibiotics, rapid discovery, formulation and application versatility, and biofilm clearance are characteristics looked for in antimicrobials (<xref ref-type="bibr" rid="B65">Loc-Carrillo and Abedon, 2011</xref>). Auto-dosing refers to the fact that phages themselves contribute to establishing the bacterial lethal dose by increasing their number during the bacterial-killing process (<xref ref-type="bibr" rid="B21">Carlton, 1999</xref>; <xref ref-type="bibr" rid="B113">Skurnik and Strauch, 2006</xref>; <xref ref-type="bibr" rid="B23">Chan and Abedon, 2012</xref>). A narrow host range limits the number of bacterial types with which selection for specific phage-resistance mechanisms can occur (<xref ref-type="bibr" rid="B44">Hyman and Abedon, 2010</xref>). Some phage derived proteins, such as endolysins or depolymerases, are able to degrade the biofilm allowing the phage to destroy the reservoir of bacteria that reside within exopolysaccharide matrix (<xref ref-type="bibr" rid="B42">Hanlon et al., 2001</xref>; <xref ref-type="bibr" rid="B120">Tait et al., 2002</xref>).</p>
<p>Phages are versatile in terms of formulation and can be combined with antibiotics or incorporated into scaffolds such as hydrogels or wound dressings (<xref ref-type="bibr" rid="B5">Alisky et al., 1998</xref>; <xref ref-type="bibr" rid="B59">Kutter et al., 2010</xref>; <xref ref-type="bibr" rid="B133">Wroe et al., 2020</xref>). They can be applied as liquids, creams, impregnated into solids, in addition to being suitable for most routes of administration (<xref ref-type="bibr" rid="B21">Carlton, 1999</xref>; <xref ref-type="bibr" rid="B58">Kutateladze and Adamia, 2010</xref>; <xref ref-type="bibr" rid="B59">Kutter et al., 2010</xref>). Different phages can be mixed as cocktails to broaden their properties, typically resulting in a collectively greater antibacterial spectrum of activity and lowering the chance of acquiring phage resistant bacterial strains (<xref ref-type="bibr" rid="B76">Merabishvili et al., 2009</xref>; <xref ref-type="bibr" rid="B38">Goodridge, 2010</xref>).</p>
<p>Phages as pharmaceuticals are protein-based, live-biological agents that can potentially interact with the body&#x2019;s immune system, can actively replicate, and can even evolve during manufacture or use (<xref ref-type="bibr" rid="B65">Loc-Carrillo and Abedon, 2011</xref>). Phages possess unique pharmacokinetics and pharmacodynamics that remain poorly understood (<xref ref-type="bibr" rid="B27">Cooper et al., 2016</xref>). The pharmacokinetics of phages are complicated due to their self-replicating nature. Critical parameters that affect phage therapy are the phage adsorption rate, burst size (the number of phages released by one infected bacteria), latent period (the time between phage infection and bacterial lysis, i.e., the time needed to assemble new phage progenies), initial phage dose, and density-dependent thresholds (<xref ref-type="bibr" rid="B93">Payne and Jansen, 2001</xref>). Another important parameter is the clearance rate of the phage particles from the body fluids by the reticuloendothelial system. Although phages are considered generally well penetrating different tissues and body organs they may significantly differ in bioavailability after oral application (<xref ref-type="bibr" rid="B80">Mi&#x0229;dzybrodzki et al., 2017b</xref>; <xref ref-type="bibr" rid="B29">Da&#x0327;browska, 2019</xref>). Their stability in environment is one of the limiting factors for production of standard phage medicinal products which require longer storage (<xref ref-type="bibr" rid="B47">Jault et al., 2018</xref>; <xref ref-type="bibr" rid="B48">Jo&#x0144;czyk-Matysiak et al., 2019</xref>).</p>
</sec>
<sec id="S5">
<title>Phages and the Immune System</title>
<p>Historically, phages were regarded as immunologically inert. However, phages do cause a humoral immune response (<xref ref-type="bibr" rid="B90">Ochs et al., 1971</xref>; <xref ref-type="bibr" rid="B66">&#x0141;usiak-Szelachowska et al., 2014</xref>; <xref ref-type="bibr" rid="B43">Hodyra-Stefaniak et al., 2015</xref>; <xref ref-type="bibr" rid="B69">Majewska et al., 2015</xref>; <xref ref-type="bibr" rid="B135">Zaczek et al., 2016</xref>). The production of anti-phage antibodies can affect the outcome of phage therapeutic interventions (<xref ref-type="bibr" rid="B66">&#x0141;usiak-Szelachowska et al., 2014</xref>). Furthermore, the route of administration plays a big role on the level of antibody production (<xref ref-type="bibr" rid="B136">Zelasko et al., 2016</xref>; <xref ref-type="bibr" rid="B67">&#x0141;usiak-Szelachowska et al., 2017</xref>). For instance, oral administration seems to lead to the lowest level of anti-phage antibodies compared to intraperitoneal injection in mouse models (<xref ref-type="bibr" rid="B29">Da&#x0327;browska, 2019</xref>). Moreover, low levels of anti-phage antibodies have also been detected in human subjects after oral administration of phage (<xref ref-type="bibr" rid="B80">Mi&#x0229;dzybrodzki et al., 2017b</xref>). Although an antibody response might be present during or after a phage therapeutic intervention, this does not necessarily lead to a reduction of the therapeutic potential (<xref ref-type="bibr" rid="B66">&#x0141;usiak-Szelachowska et al., 2014</xref>, <xref ref-type="bibr" rid="B67">2017</xref>; <xref ref-type="bibr" rid="B136">Zelasko et al., 2016</xref>; <xref ref-type="bibr" rid="B28">Da&#x0327;browska, 2018</xref><xref ref-type="bibr" rid="B29">Da&#x0327;browska, 2019</xref>).</p>
<p>However, recent research has demonstrated a phage-induced innate immune response (<xref ref-type="fig" rid="F1">Figure 1</xref>). Moreover, mathematical models have predicted their importance in the outcome of a therapeutic intervention (<xref ref-type="bibr" rid="B130">Van Belleghem et al., 2018</xref>). As expected, this phage induced response appears to mimic an antiviral response (<xref ref-type="bibr" rid="B129">Van Belleghem et al., 2017</xref>; <xref ref-type="bibr" rid="B37">Gogokhia et al., 2019</xref>; <xref ref-type="bibr" rid="B119">Sweere et al., 2019</xref>). The antiviral immune response is driven by a Toll-like receptor (TLR) 9 response to <italic>Caudovirales</italic> DNA (<xref ref-type="bibr" rid="B37">Gogokhia et al., 2019</xref>) whereas it is driven by a TLR3 response to <italic>Inoviridae</italic> RNA (<xref ref-type="bibr" rid="B119">Sweere et al., 2019</xref>). The antiviral immune response may help the phage escape clearance or enable the bacterial host to thrive.</p>
<p>Interestingly, some phages or their preparations may exert anti-inflammatory activity (<xref ref-type="bibr" rid="B129">Van Belleghem et al., 2017</xref>, <xref ref-type="bibr" rid="B130">2018</xref>). A significant decrease in C reactive proteins (CRP) was observed in some patients treated with phages, even in the absence of clearing the bacterial infection (<xref ref-type="bibr" rid="B39">Gorski et al., 2016</xref>). Moreover, it has been shown that <italic>Escherichia coli</italic> phage T4 presents a strong anti-inflammatory effect in mouse models reflecting the autoimmune reaction corresponding to rheumatoid arthritis (<xref ref-type="bibr" rid="B77">Mi&#x0229;dzybrodzki et al., 2017a</xref>). These observations are in accordance with observations in humans, suggesting that phage therapy may modify the immune responses.</p>
</sec>
<sec id="S6">
<title>Phages Aiding Suppressive Therapy</title>
<p>The minimal inhibitory concentration (MIC) of an antibiotic is determined on cultured bacteria and does not reflect the susceptibility of the bacteria within a biofilm. Killing the bacteria within a biofilm requires a many-fold higher concentration of antibiotic to achieve the minimum biofilm eradication concentration (MBEC) (<xref ref-type="bibr" rid="B105">Ricciardi et al., 2020</xref>). Thus, the use of suboptimal antibiotic concentrations could lead to antibiotic resistance in the setting of PJI. Phages are an ideal alternative or adjunct to antibiotics for treating or suppressing PJI (<xref ref-type="table" rid="T1">Table 1</xref>). Phages have a proven track record for combating, and in some cases eradicating biofilms (<xref ref-type="bibr" rid="B124">Tkhilaishvili et al., 2020</xref>). Even though bacteria in a biofilm, such as small colony variants, have a decreased cellular metabolic activity that often makes them resistant to antibiotics. Furthermore, studies have shown synergy between the use of systemic antibiotics and phages to treat biofilm-associated infections, although the precise mechanism is currently not known (<xref ref-type="bibr" rid="B134">Yilmaz et al., 2013</xref>; <xref ref-type="bibr" rid="B49">Kamal and Dennis, 2015</xref>; <xref ref-type="bibr" rid="B125">Torres-Barcel&#x00F3; et al., 2016</xref>). On the downside, antagonistic effects between phages and antibiotics have been observed as well. <italic>In vitro</italic> antagonism between a mixture of two <italic>P. aeruginosa</italic> phages and high doses of tobramycin (<xref ref-type="bibr" rid="B49">Kamal and Dennis, 2015</xref>) was observed in which MBEC tobramycin was effective against <italic>P. aeruginosa</italic> biofilms, but its effect diminished when phage was added. This is in line with an observation that phage may sequester antibiotics, thus lowering the active concentration (<xref ref-type="bibr" rid="B122">Tarafder et al., 2020</xref>). Hence, when combining antibiotics and phages, strategies may have to be considered for sequential administration.</p>
<p>Furthermore, the occurrence of phage resistance provides an additional hurdle for the use of phage as a therapeutic (<xref ref-type="bibr" rid="B114">Smith and Huggins, 1983</xref>; <xref ref-type="bibr" rid="B64">Levin and Bull, 2004</xref>). In the therapeutic setting, these phage resistant strains can occur in 17&#x2013;86% of treated patients, depending on the pathogen (<xref ref-type="bibr" rid="B78">Mi&#x0229;dzybrodzki et al., 2012</xref>). However, phage resistance often comes at the cost of reduced bacterial virulence and can even be accompanied by re-sensitization to antibiotics (<xref ref-type="bibr" rid="B20">Capparelli et al., 2010</xref>; <xref ref-type="bibr" rid="B41">Gu et al., 2012</xref>; <xref ref-type="bibr" rid="B63">Le&#x00F3;n and Bast&#x00ED;as, 2015</xref>; <xref ref-type="bibr" rid="B24">Chan et al., 2016</xref>; <xref ref-type="bibr" rid="B91">Oechslin, 2018</xref>).</p>
<p>Only a limited amount of pre-clinical studies have evaluated the potential use of phages to treat PJI (<xref ref-type="bibr" rid="B134">Yilmaz et al., 2013</xref>; <xref ref-type="bibr" rid="B51">Kaur et al., 2016</xref>; <xref ref-type="bibr" rid="B53">Kishor et al., 2016</xref>; <xref ref-type="bibr" rid="B33">Ferry et al., 2018a</xref>, <xref ref-type="bibr" rid="B34">b</xref>; <xref ref-type="bibr" rid="B19">Cano et al., 2020</xref>), although attempts to treat PJI-like diseases, such as osteomyelitis, with phage date back to the early 1930s (<xref ref-type="bibr" rid="B4">Albee, 1933</xref>). Different administration routes can be deployed, as recently reviewed by <xref ref-type="bibr" rid="B29">Da&#x0327;browska (2019)</xref>, of which oral administration or injection (intraperitoneal, intramuscular, or subcutaneous) are the most common (<xref ref-type="bibr" rid="B29">Da&#x0327;browska, 2019</xref>). The actual dose needed to obtain a therapeutic effect is still debated within the field with reports showing as low as 10<sup>3</sup> pfu/ml being sufficient to eradicate a bacterial infection (<xref ref-type="bibr" rid="B116">Soothill, 1994</xref>; <xref ref-type="bibr" rid="B73">Marza, 2006</xref>), with general consensus saying a minimum of 10<sup>6</sup> pfu/ml is needed (<xref ref-type="bibr" rid="B84">Morozova et al., 2018</xref>).</p>
<p>Phages have been used to treat PJI in the context of antibiotics (<xref ref-type="bibr" rid="B34">Ferry et al., 2018b</xref>). For example, in 2018, a patient with relapsing PJI of the right hip was treated by injecting a cocktail of phages into the joint in addition to systemic antibiotics. Eighteen months after phage therapy, the clinical signs of PJI were absent. This case shows the efficacy of phages in a PJI setting, although surgical intervention was still necessary for this treatment and it is unclear whether this represents suppression prior to phage resistance or eradication. Another recent case with a patient with a right total knee arthroplasty 11 years prior, suffering multiple episodes of PJI despite numerous surgeries and prolonged courses of antibiotics, showed progressive clinical worsening and development of severe allergies to antibiotics, had been offered limb amputation for his persistent right prosthetic knee infection due to <italic>Klebsiella pneumoniae</italic> complex. As a last resort he was offered intravenous phage therapy (<xref ref-type="bibr" rid="B19">Cano et al., 2020</xref>). The patient received 40 doses of a single phage spread over 8 weeks, in combination with minocycline and was able to circumvent further surgery. Furthermore, the authors were not able to identify any phage resistant strains over this eight-week course of phage treatment. This might be due to the lower metabolic activity of the bacteria in the biofilm leading to a lower chance of phage resistance to occur.</p>
</sec>
<sec id="S7">
<title>Phages Preventing PJI</title>
<p>Prophylactic strategies require anticipating a certain bacterial infection in order to provide the necessary agents to combat a not yet existing infection. Nevertheless, additional research is needed to further extend the lifetime of these phages after they undergo the coating or impregnation strategies to provide long lasting protection (<xref ref-type="fig" rid="F2">Figure 2</xref>). It is currently not well described what amount of phage inactivation could be expected or is accepted when mixing phages with bone cement or coating them on prosthetic surfaces. Also getting a clear view of the commensal flora of a patient will become valuable in order to make educated guesses as to which phages to prevent PJI. The main difficulty with using phages in this manner is that they will lose their activity after one round of infection. This enables the removal of an initial infection but would not enable the clearance of a future recurrent infection. To tackle this problem the bioavailability of the phage can be altered by embedding them in a matrix enabling the slow release from the prosthetic bone cement over time and in different waves.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption><p>Alternative strategies for treating or preventing Prosthetic joint infections (PJI). Although that joint replacement is a life-enhancing procedure, an unfortunate minority experiences pain and will ultimately require additional surgery. Septic failure, i.e., periprosthetic joint infections, are the most common reason for joint replacement failure. During PJI, bacteria bound to the prosthetic will form biofilm structure that become resistant to antibiotic treatments. Hence the treatment of PJI requires the removal of these biofilm contaminated implants in addition to the administration of antibiotics. The use of phage can form a valid alternative (or additive to classic antibiotic treatments) to treat these PJIs without the need of a surgical intervention. These phages can be administered orally as a liquid or in a powdered formulation or injected intravenously or as a hydrogel directly in the joint. Alternatively, phages can be used to prevent the occurrence of PJI by either mixing phages in the bone cement or coating the implant with phages. In case of coating implants with phage, one could opt for a single phage or a cocktail of phages. A gradual release system could be applied, using hydroxypropyl methylcellulose (HPMC) to gradually release and deliver the therapeutic agents at the potential sites of infections. This might prevent the establishment of biofilms and the occurrence of PJIs.</p></caption>
<graphic xlink:href="fmicb-11-591021-g002.tif"/>
</fig>
<p>After the selective identification, patients could be decolonized of offending organisms prior to surgery, reducing surgical site infection and PJI after joint arthroplasty. The downside of the use of antibiotics for decolonization, especially in PJI, is the occurrence of antibiotic resistant strains. However, this problem would not arise when phages are used to disinfect the site of surgery. The use of phage would remove the targeted bacteria without disturbing the commensal flora or inducing dysbiosis in the patients gut or skin.</p>
<p>Other approaches that could be used is to directly interfere with the biofilm formation. Research has focused on disrupting biofilm formation by interfering with the quorum sensing (<xref ref-type="bibr" rid="B118">Sully et al., 2014</xref>; <xref ref-type="bibr" rid="B9">Atwood et al., 2016</xref>; <xref ref-type="bibr" rid="B40">Grandcl&#x00E9;ment et al., 2016</xref>). These compounds target a variety of steps in the quorum sensing pathway, including the inhibition of quorum sensing signal production through degradation or substitution of SAM or acyl-ACP (precursors to acyl-homoserine lactone). Sequestration of quorum sensing signals using antibodies have also been evaluated as a potential strategy (<xref ref-type="bibr" rid="B92">Park et al., 2007</xref>). Alternative strategies have looked to impair the quorum signal transduction through the disruption kinase domain involved in the quorum sensing transduction (<xref ref-type="bibr" rid="B9">Atwood et al., 2016</xref>; <xref ref-type="bibr" rid="B40">Grandcl&#x00E9;ment et al., 2016</xref>). Again phages could play a potential role in preventing the formation of biofilms, not due to their direct lytic activity but due to the potential effects of depolymerases present on certain phage tails (<xref ref-type="bibr" rid="B10">Azeredo and Sutherland, 2008</xref>; <xref ref-type="bibr" rid="B54">Knecht et al., 2020</xref>). These depolymerases could help degrade the biofilm matrix enabling the immune system to more effectively clear a starting bacterial infection.</p>
<p>The optimal form of delivery of phages to the joint implant site is unclear. Phages can be impregnated into bone cement, polymethyl methacrylate (<xref ref-type="bibr" rid="B108">Samokhin et al., 2018</xref>). However, once phages are impregnated into polymethyl methacrylate they lose their effective titer between over 1&#x2013;2 weeks.</p>
<p>Recent research points into the potential of using phages to coat prosthetic materials. Different strategies could be applied, one could coat with a single phage or a phage cocktail either to one specific pathogen or a diverse set of pathogens. <xref ref-type="bibr" rid="B51">Kaur et al. (2016)</xref>, showed the potential of using phage and antibody coated Kirshner wire to prevent <italic>S. aureus</italic> infection when used at the site of the prosthetic (<xref ref-type="bibr" rid="B51">Kaur et al., 2016</xref>). The authors used a hydroxypropyl methylcellulose (HPMC) gel, for the gradual release and delivery of two therapeutic agents at the implant site. These coatings of the Kirshner wires remained stable over 20 days, although a 3-log reduction could be observed after initial coating. Moreover, the authors observed that the elution from this gel remained steady for 48 h. A combinatorial approach of the <italic>S. aureus</italic> phage and linezolid led to a reduction of bacterial adhesion by 4-log, as well as reducing the occurrence of phage resistant strains when phage alone was used (<xref ref-type="bibr" rid="B51">Kaur et al., 2016</xref>).</p>
</sec>
<sec id="S8">
<title>Conclusion</title>
<p>Orthopedic devices are prevalent and durable making them one of the most common surgical implant types to become infected (<xref ref-type="bibr" rid="B45">Inzana et al., 2016</xref>). All of the materials used for implantable orthopedic devices are easily colonized by bacteria (<xref ref-type="bibr" rid="B35">Gbejuade et al., 2015</xref>). Nevertheless, several preventative and therapeutic strategies exist, some more invasive then others. Bacteriophage is a valuable addition as the field looks to control antimicrobial infection in a more effective manner &#x2013; moving beyond the morbidity of the scalpel and delivering higher doses of resistance-generating antibiotics. A very promising path is the use of phage coated prosthetics. Although the pitfall here lies in the fact that the immobilized phage will lose its activity after one round of infection. This would still allow to combat an initial infection but not a recurrent one. To tackle this problem the bioavailability of the phage can be altered by embedding them in a matrix enabling the slow release from the prosthetic bone cement over time and in different waves. Alternatively, phage embedded in hydrogels and injected directly at the site of infection could be performed on patients that already have an implant to remove the infection. This would enable to physicians to treat PJIs without the need of surgical intervention or removal of the implant, providing layover between the development of phage coated prosthetics and the use of phage in PJI. The use of phages could also enable to combat current unculturable bacteria, on the condition that they can easily be identified through genomic approach. It has been suggested that machine learning approaches can be utilized to either identify, or generate through synthetic genomics, based on the genomic information provided on the bacterial target (<xref ref-type="bibr" rid="B62">Leite et al., 2018</xref>; <xref ref-type="bibr" rid="B72">Martorell-Marug&#x00E1;n et al., 2019</xref>; <xref ref-type="bibr" rid="B11">Bal&#x00E1;&#x017E; et al., 2020</xref>; <xref ref-type="bibr" rid="B99">Pirnay, 2020</xref>).</p>
<p>Nevertheless, to use phages under these circumstances the field needs to further invest in understanding the bioavailability and biodistribution of phages as well as their immunogenicity in order to generate the best outcome for the patients. Although rigorous clinical trials are currently lacking progress has begun to treat PJI with phage.</p>
</sec>
<sec id="S9">
<title>Author Contributions</title>
<p>All authors participated in the conception, drafting, and/or editing of the manuscript.</p>
</sec>
<sec sec-type="COI-statement" id="conf1">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</body>
<back>
<fn-group>
<fn fn-type="financial-disclosure">
<p><bold>Funding.</bold> This work was supported by grants KL2TR003143, R21AI133370, R21AI133240, R01AI12492093, and grants from Stanford SPARK, the Falk Medical Research Trust, the Orthopaedic Research and Education Foundation (OREF), and the Cystic Fibrosis Foundation (CFF).</p>
</fn>
</fn-group>
<ref-list>
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