AUTHOR=Li Sipeng , Liu Yang , Yang Xin , Yang Yun , Peng Junxiang , Xu Yanhong , Wei Jianhe TITLE=Spatiotemporal composition and diversity of endophyte communities in Dracaena cambodiana on Hainan Island JOURNAL=Frontiers in Microbiology VOLUME=Volume 16 - 2025 YEAR=2025 URL=https://www.frontiersin.org/journals/microbiology/articles/10.3389/fmicb.2025.1540669 DOI=10.3389/fmicb.2025.1540669 ISSN=1664-302X ABSTRACT=IntroductionDracaena cambodiana produces a red resin known as Dragon’s blood, which is used worldwide in traditional medicine and as a dye. The role of endophytes in the resin-formation process remains underexplored. Understanding the endophyte communities and their functional roles in resin production could enable the development of efficient induction techniques for resin production.MethodsIn this study, ITS and metagenomic sequencing analyzed endophyte communities’ characteristics and functional traits in different tissues and D. cambodiana across multiple wild populations on Hainan Island.ResultsWe identified distinct fungal genera that were dominant in different tissues. Following injury, we observed significant changes in the expression of endophytic fungal genes. These changes indicated that metabolic pathways associated with resin metabolism, sucrose metabolism, signal transduction, and phenylalanine metabolism were likely involved in resin formation. Additionally, several glycosylation gene families were upregulated in the post-injury endophytic communities, which suggests a role in flavonoid transport and the reduction of autotoxic effects.DiscussionOur results suggest that endophytes play a vital role in the resin-formation process of D. cambodiana. Isolating specific endophytes or using synthetic communities could potentially improve resin yields and avoid pathogenic fungi, ensuring safety. The findings from this study provide a theoretical basis for the development of high-efficiency resin induction techniques by targeting the dynamic changes in endophyte communities across tissues, regions, and resin formation stages.