Original Research

Accepted on 21 Sep 2023

Functional genetic variation in pe/ppe genes contributes to diversity in Mycobacterium tuberculosis lineages and potential interactions with the human host

Paula Josefina Gomez Gonzalez
Anna Daria Grabowska
Leopold D Tientcheu
Anthony George Tsolaki
Martin L Hibberd
Susana Campino
Jody Phelan
Taane Gregory Clark

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1244319

Original Research

Published on 21 Sep 2023

Population structure and genetic diversity of Streptococcus suis isolates obtained from the United States

Tracy L. Nicholson
Anwar A. Kalalah
Mark Eppinger

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1250265

350 views

Original Research

Published on 21 Sep 2023

Comparative genomic analysis reveals differential genomic characteristics and featured genes between rapid- and slow-growing non-tuberculous mycobacteria

Menglu Zhang
Peihan Wang
Cuidan Li
Ofir Segev
Jie Wang
Xiaotong Wang
Liya Yue
Xiaoyuan Jiang
Yongjie Sheng
Asaf Levy

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1243371

275 views

Original Research

Published on 21 Sep 2023

Evaluation of whole and core genome multilocus sequence typing allele schemes for Salmonella enterica outbreak detection in a national surveillance network, PulseNet USA

Molly M. Leeper
Beth M. Tolar
Taylor Griswold
Eshaw Vidyaprakash
Kelley B. Hise
Grant M. Williams
Sung B. Im
Jessica C. Chen
Hannes Pouseele
Heather A. Carleton

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1254777

383 views

Original Research

Published on 21 Sep 2023

Genomic and clinical characterization of Klebsiella pneumoniae carrying the pks island

Zhiqian Wang
Yanjun Liu
Peilin Liu
Zijuan Jian
Qun Yan
Bin Tang
Awen Yang
Wenen Liu

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1189120

321 views

Original Research

Published on 20 Sep 2023

Rhodobacteraceae dominate the core microbiome of the sea star Odontaster validus (Koehler, 1906) in two opposite geographical sectors of the Antarctic Ocean

Emanuela Buschi
Antonio Dell’Anno
Michael Tangherlini
Sergio Stefanni
Marco Lo Martire
Laura Núñez-Pons
Conxita Avila
Cinzia Corinaldesi

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1234725

252 views

Hypothesis and Theory

Accepted on 18 Sep 2023

The effectiveness of artificial microbial community selection: a conceptual framework and a meta-analysis

Shi-Rui Yu
Yuan-Ye Zhang
Quan-Guo Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1257935

Correction

Published on 18 Sep 2023

Corrigendum: Genetic characteristics and integration specificity of Salmonella enterica temperate phages

Siqi Sun
Xianglilan Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1273462

200 views

Original Research

Published on 15 Sep 2023

Comparative genomics and transcriptome analysis reveals potential pathogenic mechanisms of Microdochium paspali on seashore paspalum

Peiyuan Jin
Yixuan Kong
Ze Zhang
Huangwei Zhang
Yinglu Dong
Kurt Lamour
Zhimin Yang
Yuxin Zhou
Jian Hu

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1259241

445 views

Original Research

Published on 14 Sep 2023

Insights into early evolutionary adaptations of the Akkermansia genus to the vertebrate gut

Dámariz González
Mauricio Morales-Olavarria
Boris Vidal-Veuthey
Juan P. Cárdenas

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1238580

692 views

Original Research

Published on 12 Sep 2023

The man, the plant, and the insect: shooting host specificity determinants in Serratia marcescens pangenome

Anton E. Shikov
Anastasiya V. Merkushova
Iuliia A. Savina
Anton A. Nizhnikov
Kirill S. Antonets

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1211999

349 views

Original Research

Accepted on 11 Sep 2023

Pathogenicity Assessment of Shiga Toxin-Producing Escherichia coli Strains Isolated from Wild Birds in a Major Agricultural Region in California

Michelle Qiu Carter
Beatriz Quiñones
Nicole Laniohan
Diana Carychao
Antares Pham
Xiaohua He
Michael Cooley

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1214081

Original Research

Published on 08 Sep 2023

Characterization of three rapidly growing novel Mycobacterium species with significant polycyclic aromatic hydrocarbon bioremediation potential

Yang Deng
Tong Mou
Junhuan Wang
Jing Su
Yanchun Yan
Yu-Qin Zhang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1225746

530 views

Review

Published on 07 Sep 2023

Impact of breastfeeding and other early-life factors on the development of the oral microbiome

Roaa A. Arishi
Ching T. Lai
Donna T. Geddes
Lisa F. Stinson

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1236601

685 views

Original Research

Published on 07 Sep 2023

AI-driven pan-proteome analyses reveal insights into the biohydrometallurgical properties of Acidithiobacillia

Liangzhi Li
Lei Zhou
Chengying Jiang
Zhenghua Liu
Delong Meng
Feng Luo
Qiang He
Huaqun Yin

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1243987

451 views

Original Research

Published on 07 Sep 2023

ROSes-FINDER: a multi-task deep learning framework for accurate prediction of microorganism reactive oxygen species scavenging enzymes

Yueyang Yan
Zhanpeng Shi
Haijian Wei

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1245805

369 views

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Articles

Functional genetic variation in pe/ppe genes contributes to diversity in Mycobacterium tuberculosis lineages and potential interactions with the human host

Population structure and genetic diversity of Streptococcus suis isolates obtained from the United States

Comparative genomic analysis reveals differential genomic characteristics and featured genes between rapid- and slow-growing non-tuberculous mycobacteria

Evaluation of whole and core genome multilocus sequence typing allele schemes for Salmonella enterica outbreak detection in a national surveillance network, PulseNet USA

Genomic and clinical characterization of Klebsiella pneumoniae carrying the pks island

Rhodobacteraceae dominate the core microbiome of the sea star Odontaster validus (Koehler, 1906) in two opposite geographical sectors of the Antarctic Ocean

The effectiveness of artificial microbial community selection: a conceptual framework and a meta-analysis

Corrigendum: Genetic characteristics and integration specificity of Salmonella enterica temperate phages

Comparative genomics and transcriptome analysis reveals potential pathogenic mechanisms of Microdochium paspali on seashore paspalum

Insights into early evolutionary adaptations of the Akkermansia genus to the vertebrate gut

The man, the plant, and the insect: shooting host specificity determinants in Serratia marcescens pangenome

Pathogenicity Assessment of Shiga Toxin-Producing Escherichia coli Strains Isolated from Wild Birds in a Major Agricultural Region in California

Characterization of three rapidly growing novel Mycobacterium species with significant polycyclic aromatic hydrocarbon bioremediation potential

Impact of breastfeeding and other early-life factors on the development of the oral microbiome

AI-driven pan-proteome analyses reveal insights into the biohydrometallurgical properties of Acidithiobacillia

ROSes-FINDER: a multi-task deep learning framework for accurate prediction of microorganism reactive oxygen species scavenging enzymes