Frontiers in Microbiomes | New and Recent Articles https://www.frontiersin.org/journals/microbiomes RSS Feed for Frontiers in Microbiomes | New and Recent Articles en-us Frontiers Feed Generator,version:1 2026-04-27T04:50:06.702+00:00 60 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1672092 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1672092 <![CDATA[Characterization of the gut microbiome of wild Peromyscus sonoriensis in New Mexico, USA]]> 2026-04-24T00:00:00Z Original Research Andrew M. SkidmoreSamuel M. GoodfellowRobert A. NofchisseyLimin JiangJonathan DunnumJoseph A. CookYan GuoIvana MaliSteven B. Bradfute https://www.frontiersin.org/articles/10.3389/frmbi.2026.1717288 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1717288 <![CDATA[Understanding the human gut microbiome: from composition to disease association]]> 2026-04-22T00:00:00Z Review Muneerah Abdullah AlaliAmal Bakr Shori https://www.frontiersin.org/articles/10.3389/frmbi.2026.1782119 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1782119 <![CDATA[Uncovering leaf and root microbiomes of mangrove trees in French Guiana]]> 2026-04-22T00:00:00Z Brief Research Report Mathilde VigneronSébastien HalarySandrine CrochemoreLaetitia PlaisanceNathalie ParthuisotYvan Bettarel https://www.frontiersin.org/articles/10.3389/frmbi.2026.1815455 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1815455 <![CDATA[Editorial: The microbiome in cancer therapy response]]> 2026-04-21T00:00:00Z Editorial Elizabeth M. ParkLiza MakowskiKatherine L. Cook https://www.frontiersin.org/articles/10.3389/frmbi.2026.1734737 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1734737 <![CDATA[Gut microbiota composition correlates with PBMC microRNA expression following maximal exercise testing in endurance athletes]]> 2026-04-01T00:00:00Z Original Research Guy ShalmonGuy ShapiraRawan IbrahimIfat Israel-ElgaliMeitar GradRani ShlayemIlan YoungsterMickey ScheinowitzNoam Shomron https://www.frontiersin.org/articles/10.3389/frmbi.2026.1777385 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1777385 <![CDATA[Gut microbiota and its association with gastrointestinal symptoms and pharmacological treatments in a sibling-matched cohort with autism spectrum disorder]]> 2026-03-24T00:00:00Z Original Research Florencia PeñalbaAndreina GuisandeLucía LambertiCamila RusiñolMaite IrastorzaFlorencia KonikClaudio IglesiasPaula MendiveGabriela GarridoAndrés ParadaNadia Riera https://www.frontiersin.org/articles/10.3389/frmbi.2026.1779767 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1779767 <![CDATA[Synergistic analysis of genome-resolved metagenomics and language-based machine learning reveals hidden probiotic genomes in the Indian healthy human gut microbiome]]> 2026-03-18T00:00:00Z Original Research Arunmozhi Bharathi AchudhanReetumbhara ParthibanTejaswini RamasubramanianKanchan MukeshLilly M. Saleena https://www.frontiersin.org/articles/10.3389/frmbi.2026.1691965 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1691965 <![CDATA[Shared taxa but distinct communities: within-individual comparisons of oral, nasal, and urinary microbiomes in asymptomatic “healthy” females]]> 2026-03-09T00:00:00Z Brief Research Report Sandra JablonskaAlex KulaCatherine Putonti https://www.frontiersin.org/articles/10.3389/frmbi.2026.1735358 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1735358 <![CDATA[Maize leaf endosphere microbiome was affected by domestication and shows patterns consistent with microbial dysbiosis]]> 2026-02-23T00:00:00Z Original Research Ilksen TopcuJulio S. BernalSanjay Antony-Babu https://www.frontiersin.org/articles/10.3389/frmbi.2026.1742803 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1742803 <![CDATA[Trichoderma combined with palm kernel shell biochar promotes root health and rhizosphere biodiversity in young oil palm seedlings infected with Ganoderma boninense]]> 2026-02-13T00:00:00Z Original Research Saran AnandanAsgar AliAnurita SelvarajooChristina Vimala Supramaniam https://www.frontiersin.org/articles/10.3389/frmbi.2026.1653994 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1653994 <![CDATA[The prevalence and distribution of Acidobacteriota in the Nama Karoo of South Africa]]> 2026-02-13T00:00:00Z Original Research Janca PietersTersia Andrea ConradieKarin Jacobs https://www.frontiersin.org/articles/10.3389/frmbi.2026.1687978 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1687978 <![CDATA[Microbiota disparities in stool, oral swabs, and saliva between control and early-onset colorectal neoplasia groups: an exploratory analysis]]> 2026-02-04T00:00:00Z Original Research Ji Eun NaTae Oh KimYong Eun Park https://www.frontiersin.org/articles/10.3389/frmbi.2026.1611702 https://www.frontiersin.org/articles/10.3389/frmbi.2026.1611702 <![CDATA[The influence of breast milk microbiota from HIV-infected women on infant gut microbiota colonization within the first two weeks of life]]> 2026-01-28T00:00:00Z Original Research Privilege Tendai MunjomaJacqueline WyssArthur John MazhanduSebastian Bruno Ulrich JordiStephanie Christine Ganal-VonarburgRutendo Zinyama-GutsireLeolin KatsidziraBahtiyar YilmazBenjamin MisselwitzKerina Duri https://www.frontiersin.org/articles/10.3389/frmbi.2025.1707779 https://www.frontiersin.org/articles/10.3389/frmbi.2025.1707779 <![CDATA[Community assembly following disturbance in batch anaerobic digesters displays highly reproducible secondary succession and a shifting stochastic-deterministic balance]]> 2026-01-27T00:00:00Z Original Research Flor de María Guerrero-ToledoTeodoro Espinosa-SolaresGuadalupe Hernández-EugenioDavid H. Huber 1600) remained nearly the same, however the relative abundance of species, families, and functions changed during each successional stage. Syntrophic bacteria peaked in abundance during the mid-succession, high methane stage. Succession of overall KEGG functions was highly similar although species and carbohydrate functions diverged during late succession, suggesting diversity of niche partitioning during degradation of recalcitrant organic matter. We estimated the relative contributions of stochastic and deterministic processes and found a shift in the balance during succession. Early succession was not dominated by either dispersal or selection while late succession was dominated by variable selection. In conclusion, methane production recovered following severe (non-lethal) disturbance in a pre-adapted digester microbiome through a reproducible community assembly pathway that shifted toward deterministic, variable selection over time.]]> https://www.frontiersin.org/articles/10.3389/frmbi.2025.1731851 https://www.frontiersin.org/articles/10.3389/frmbi.2025.1731851 <![CDATA[Editorial: Gut microbiota modulation to mitigate stress-induced functional changes]]> 2026-01-20T00:00:00Z Editorial Ruoting YangRasha Hammamieh https://www.frontiersin.org/articles/10.3389/frmbi.2025.1702198 https://www.frontiersin.org/articles/10.3389/frmbi.2025.1702198 <![CDATA[Bile acids and gut microbiota: interactions and impacts on polycystic ovary syndrome]]> 2026-01-12T00:00:00Z Review Haiqing QianJialing TaoLingli ShiHaiyan SunLi YangLi juan CuiWenting XuLihong Wang https://www.frontiersin.org/articles/10.3389/frmbi.2025.1701608 https://www.frontiersin.org/articles/10.3389/frmbi.2025.1701608 <![CDATA[The gut–brain connection: microbes’ influence on mental health and psychological disorders]]> 2026-01-07T00:00:00Z Review Pegah AtaeiHamidreza KalantariTamara S. BodnarRaymond J. Turner https://www.frontiersin.org/articles/10.3389/frmbi.2025.1676639 https://www.frontiersin.org/articles/10.3389/frmbi.2025.1676639 <![CDATA[Multilevel selection theory informs context-dependent mycorrhizal functioning]]> 2026-01-05T00:00:00Z Perspective Anne M. KatulaNancy Collins JohnsonV. Bala ChaudharyMichelle E. Afkhami https://www.frontiersin.org/articles/10.3389/frmbi.2025.1505565 https://www.frontiersin.org/articles/10.3389/frmbi.2025.1505565 <![CDATA[Microbial dysbiosis in melasma through community profiling]]> 2025-12-22T00:00:00Z Original Research Yugandhar Reddy B.SChandraprabha DoraiswamyDeepshikha SinghNagalakshmi SurendraAparna DamleMaitreyee DuttaSavitha RajkumarBrian PotterfArindam RoyBharat ChevitiTony DaddDavid ArnoldSarah PatersonMukta SachdevPaul Van-Der LogtNirmala NairNagasuma Chandra https://www.frontiersin.org/articles/10.3389/frmbi.2025.1688681 https://www.frontiersin.org/articles/10.3389/frmbi.2025.1688681 <![CDATA[Impact of DNA extraction techniques and sequencing approaches on microbial community profiling accuracy]]> 2025-12-16T00:00:00Z Original Research Polina ZorukMaxim MorozovVladimir VeselovskyAleksandra StrokachVladislav BabenkoKsenia Klimina