Abstract
With high mortality and poor prognosis, hepatocellular carcinoma (LIHC) has become the fourth leading cause of cancer-related deaths worldwide. Most of the LIHC patients missed the best treatment period because of the untimely diagnosis. For others, even if they are temporarily cured, they have to face a very low prognostic survival rate and a very high risk of recurrence. Based on the characteristics of abnormal proliferation and uncontrolled growth of tumor cells. Cell Division Cycle Associated (CDCA) family genes, which are responsible for regulating the cell cycle and proliferation, were selected as our research object to explore the mechanism of hepatocarcinogenesis. To this end, we investigated the expression profiles of CDCA family genes in LIHC and corresponding normal tissues, and the effect of CDCAs expression on the survival of prognosis and immune cell infiltration through bioinformatics analysis methods and the publicly accessible online databases. In addition, we also analyzed the expression correlation of CDCAs and screened the neighboring genes related to functional CDCAs. The results revealed that the expression levels of CDCA1/3/5/8 were significantly increased in LIHC, regardless of stage, sex, race, drinking behavior, and other clinical factors. CDCAs expression was significantly correlated with poor prognosis and was positively correlated with the infiltration of dendritic cells, B cells, and macrophages. We also found that the most relevant neighboring genes to CDCAs in LIHC were SGO2, NDC80, BIRC5, INCENP, and PLOD1. In general, our work suggests that CDCA1/3/5/8 has the potential to be a diagnostic gene in hepatocarcinogenesis and prognostic biomarkers for LIHC patients.
Introduction
Liver cancer is the fourth leading cause of cancer-related deaths worldwide, with an estimated incidence rate of over one million cases per year, which seriously endangers human health (; ). Hepatocellular carcinoma (LIHC), accounting for 75–85% of cases, is the main pathological type of primary liver cancer (). The majority of LIHC cases arise from hepatitis B and hepatitis C in hepatocytes (Zhang et al., 2004; ). Additionally, the rising incidence of LIHC is due to a high rate of alcohol consumption and the occurrence of non-alcoholic fatty liver disease (; ). Although the development of various treatment technologies, including surgical resection, liver transplantation surgery, interventional therapy, chemotherapy, and radiotherapy, may reduce mortality to some extent, LIHC patients still bear a poor five-year survival rate of only 20–30% (; Yang et al., 2009). Thus, there is an urgent need to deepen the understanding of LIHC tumorigenesis and develop new treatment and monitoring methods for early detection and prolong the survival of LIHC patients.
Dysregulation in any process of cell division may lead to malignancy (). Cell Division Cycle Associated (CDCA) family proteins, including eight respective members of CDCA1-8, function to regulate the cell cycle and proliferation, which play an important role in biological process. Previous studies have shown that the expression levels of all or part of CDCA family genes are significantly upregulated in lung cancer, breast cancer, renal cell cancer, etc. This high expression is usually associated with a poor prognosis. For example, CDCA genes are highly expressed in ovarian cancer tissues and act on the PLK pathway to promote tumor invasion and metastasis (; ). CDCA7 can accelerate the proliferation of lung adenocarcinoma and non-small cell lung cancer by regulating the cell cycle (Wang et al., 2019). High mRNA expression of CDCA3/5/7/8 in breast cancer significantly reduced the survival rate of patients (). These findings strongly suggest the potential role of CDCAs in the tumorigenesis and prognosis of patients. It is necessary and meaningful to understand the mechanism of action of CDCAs in LIHC. To date, however, there is no systematic and comprehensive analysis of CDCAs in LIHC.
To reveal the mechanism of LIHC tumorigenesis and to identify diagnostic and prognostic markers or therapeutic targets for LIHC patients, in the current study, the transcriptional levels of CDCA genes were investigated by Oncomine and GEPIA, and we found that CDCA1/3/5/8 expression levels were significantly increased in LIHC. We also evaluated the impact of CDCA1/3/5/8 on the prognosis of LIHC patients. Specifically, we analyzed the effect of CDCAs expression on the prognostic survival rate of LIHC patients, the correlation between CDCAs transcription and various clinical factors by Kaplan-Meier plotter, and the effect of genetic alterations of CDCAs on prognosis by cBioPortal. The relationship between CDCA1/3/5/8 and immune cell infiltration was analyzed using TIMER 2.0. In addition, the interaction network between CDCAs and neighboring genes was mapped using GeneMANIA.
Materials and Methods
Oncomine Analysis
The Oncomine platform (https://www.oncomine.org/) is a publicly accessible online tumor-related gene microarray database that collects related gene expression profiles and relevant clinical information. The transcriptional levels of CDCA family genes (CDCA1–8) in different tumors and corresponding normal tissues were analyzed by Oncomine with approximately 200 samples. The expression levels were considered significantly different when fold change > 2.0 and p-value < 0.0001. We set the threshold value of gene rank to “top 10%” and the data type to “mRNA” ().
GEPIA Analysis
GEPIA (http://gepia.cancer-pku.cn/index.html) was used to analyze the expression of CDCAs sequencing in liver cancer tissue based on the GTEx and TCGA databases (). GEPIA was used to compare the CDCAs expression levels in HCC with the thresholds of |Log2 (Fold Change)| Cut-off: 1 and p-value Cut-off: 0.01. CDCAs expression in different HCC stages was analyzed using the default parameters.
Kaplan-Meier Plotter Analysis
Kaplan-Meier plotter (http://kmplot.com/analysis/) was used to evaluate the influence of different expression levels of CDCA family genes on prognostic value, including overall survival (OS), disease-specific survival (DSS), relapse-free survival (RFS), progression-free survival (PFS), and OS of liver cancer patients with different clinical factors. We analyzed all samples in the database with the parameters of Group Cut-off: Median; Hazards Ratio: Yes; 95% Confidence Interval: Yes; Follow-up threshold: All.
cBioPortal Analysis
cBioPortal (http://www.cbioportal.org/) was used to perform the interactive analysis of biomolecules in tumor tissues in the TCGA database (). Here, we used it to analyze the alterations in the frequency of CDCAs genes change. Putative copy-number calls on 370 cases determined using GISTIC 2.0. In module Comparison/Survival, we analyzed the influence of alterations on prognostic survival in HCC patients by default parameters.
GeneMANIA Analysis
GeneMANIA (http://genemania.org/), based on many large, publicly available biological datasets, is used to identify intra-genomic associations and find co-expressing biomolecules. Here, GeneMANIA was used to identify the physical interactions and co-expression of CDCAs with 20 related genes in Homo sapiens datasets by default parameters.
TIMER 2.0 Analysis
Using TIMER 2.0 (http://timer.comp-genomics.org/), we analyzed the relationship between the expression of CDCAs and infiltration levels of immune cells in liver cancer tissue. The TIMER database was used to determine the abundance of tumor infiltrates based on biomarker gene expression analysis (). Here, we chose CDCA1/3/5/8 as input and, in turn, detected cancer cells under the Immune Association module. B cells, CD8+ T cells, CD4+ T cells, neutrophils, macrophages, and dendritic cells were selected as the test types according to Li et al. (; ). Gene expression values were transformed to Log2 RSEM values.
Results
Expression of Cell Division Cycle Associateds in Hepatocellular Carcinoma and Other Cancers
Dysregulation in any process of cell division may lead to malignancy. It has been reported that there are eight respective members in the CDCA family genes, among which members may play an independent role or function cooperatively. Oncomine analysis revealed that most CDCA gene members were significantly upregulated in 15 cancer types (Figure 1). For LIHC, in particular, we found consistent results in both the Oncomine and GEPIA databases, i.e., the expression of CDCA1, CDCA3, CDCA5, and CDCA8 in LIHC was significantly higher than those in normal tissues (Figures 1, 2A). Therefore, these genes were selected for follow-up analysis and research objects.
FIGURE 1
FIGURE 2
Tumor development is usually subdivided into four stages to assess the extent of cancer cell proliferation and to determine the prognostic potential of patients. In this study, significant differences were observed in the above four members of CDCA genes in different stages of liver cancer, suggesting that these four genes may function in the whole course of LIHC tumorigenesis (Figure 2B).
Prognostic Potential of Cell Division Cycle Associateds Expression in Hepatocellular Carcinoma
Using the Kaplan-Meier plotter, we found that the transcription level of the four test CDCA genes was significantly correlated with the prognostic survival rate of liver cancer patients (Figure 3). Specifically, high expression of CDCAs in OS, DSS, RFS, and PFS represented poor prognosis, indicating that active transcription of CDCA1/3/5/8 might cause health risks, and these genes could be potential prognostic biomarkers for LIHC patients (Figure 4).
FIGURE 3
FIGURE 4
For different types of clinical factors, we further analyzed the relationship between the expression levels of CDCA1/3/5/8 genes and prognostic OS (Table 1). Here, we concluded that the high expression levels of CDCAs led to poor prognosis regardless of sex, race, or alcohol consumption. Notably, when there was no hepatitis virus or vascular infection in LIHC patients, the expression of CDCA1/3/5/8 was significantly correlated with the survival rate. Interestingly, only CDCA8 was significantly associated with survival in patients with hepatitis virus or vascular infection (Table 1).
TABLE 1
| Clinical factors | CDCA1 | CDCA3 | CDCA5 | CDCA8 | ||
|---|---|---|---|---|---|---|
| Gender | male | HR (95% CI) | 3.90 | 2.91 | 2.67 | 2.72 |
| p-value | 1.60E-05 | 1.60E-04 | 2.30E-05 | 9.50E-06 | ||
| female | HR (95% CI) | 2.37 | 2.73 | 2.16 | 3.16 | |
| p-value | 5.30E-03 | 6.30E-04 | 0.012 | 7.50E-05 | ||
| Race | White | HR (95% CI) | 2.42 | 3.30 | 1.70 | 2.31 |
| p-value | 1.90E-03 | 1.60E-03 | 0.029 | 5.30E-03 | ||
| Asian | HR (95% CI) | 5.63 | 4.14 | 6.26 | 6.19 | |
| p-value | 2.40E-09 | 5.70E-07 | 8.80E-08 | 1.20E-10 | ||
| Alcohol consumption | yes | HR (95% CI) | 5.26 | 3.03 | 3.39 | 4.12 |
| p-value | 1.80E-04 | 6.60E-03 | 4.10E-03 | 7.60E-04 | ||
| none | HR (95% CI) | 2.70 | 2.21 | 2.45 | 3.42 | |
| p-value | 3.70E-05 | 8.90E-04 | 3.30E-04 | 1.10E-07 | ||
| Hepatitis virus | Yes | HR (95% CI) | 1.94 | 1.68 | 1.93 | 2.26 |
| p-value | 0.04 | 0.13 | 0.05 | 0.02 | ||
| None | HR (95% CI) | 3.05 | 3.76 | 3.39 | 4.09 | |
| p-value | 4.50E-06 | 5.20E-06 | 4.40E-06 | 4.80E-06 | ||
| Vascular invasion | yes | HR (95% CI) | 2.65 | 2.63 | 2.37 | 4.54 |
| p-value | 0.11 | 0.09 | 0.09 | 0.04 | ||
| none | HR (95% CI) | 3.66 | 6.13 | 5.64 | 0.06 | |
| p-value | 0.01 | 5.70E-03 | 0.0098 | 5.70E-03 | ||
Correlation analysis between CDCAs expression and prognostic overall survival in LIHC patients with different clinicopathological factors via Kaplan-Meier plotter analysis.
Bold values indicate p < 0.05.
Alteration Analysis of Cell Division Cycle Associateds in Hepatocellular Carcinoma
We extracted CDCA1/3/5/8 genes and investigated the percentages of genetic alterations in the TCGA dataset. In a total of 360 samples, the alteration frequency of CDCAs was as high as 29.44% in LIHC (106/360) (Figure 5A), with 27% of CDCA1, 0.8% of CDCA3, 7% of CDCA5, and 6% of CDCA8 (Figure 5B). Next, we performed a correlation analysis between cases with (or without) CDCAs genetic alterations and prognostic survival. There was a significant correlation between CDCA alterations and survival of both OS (4.348e-3) (Figure 5C) and DFS (7.932e-3) (Figure 5D), implying that these alterations will aggravate the hepatocarcinogenesis mediated by high expression of CDCAs, which is not conducive to the survival of patients.
FIGURE 5
Correlation Analysis Between Cell Division Cycle Associateds Expression Levels and Immune Cell Infiltration in Hepatocellular Carcinoma
TIMER 2.0 was used to investigate the correlation between the expression of CDCA1/3/5/8 and infiltration levels of immune cells (CD8+ T cells, CD4+ T cells, B cells, neutrophils, macrophages, and dendritic cells). Overall, there was a statistically significant positive correlation between CDCAs gene expression and most immune cell infiltration in LIHC. In detail, CDCAs showed a poor correlation with CD8+ T cells and neutrophils, but a stronger correlation with dendritic cells, B cells, and macrophages (Figure 6).
FIGURE 6
To provide a basis for exploring the immune mechanisms mediated by CDCAs and screening potential therapeutic targets, we further investigated the correlation of expression levels between CDCA1/3/5/8 and biomarker genes of immune cells and their subsets in LIHC. We found that the CDCA gene was positively correlated with all test biomarker genes of dendritic cells and B cells (Table 2). Although CDCAs showed a significant positive correlation with most of the biomarker genes of M1 macrophage and M2 macrophage, there was no correlation between CDCA1/3/5/8 and iNOS (macrophage biomarker). In addition, there was no association between CDCA3 and COX2 or CD163 (Table 2).
TABLE 2
| Description | Gene markers | CDCA1 | CDCA3 | CDCA5 | CDCA8 | ||||
|---|---|---|---|---|---|---|---|---|---|
| Rho | p -value | Rho | p -value | Rho | p -value | Rho | p -value | ||
| B Cell | CD19 | 0.372 | 8.8E-13 | 0.319 | 1.38E-09 | 0.315 | 2.13E-09 | 0.320 | 1.19E-09 |
| CD79A | 0.291 | 3.54E-08 | 0.266 | 5.19E-07 | 0.260 | 9.59E-07 | 0.233 | 1.19E-05 | |
| M1 Macrophage | NOS2 | 0.028 | 6.09E-02 | -0.061 | 2.26E-01 | -0.018 | 7.34E-01 | 0.052 | 3.33E-01 |
| IRF5 | 0.437 | 1.64E-17 | 0.372 | 9.36E-13 | 0.379 | 3.15E-13 | 0.425 | 1.33E-16 | |
| PTGS2 | 0.207 | 1.09E-04 | 0.089 | 1.00E-01 | 0.167 | 1.83E-03 | 0.218 | 4.39E-05 | |
| M2 Macrophage | CD163 | 0.136 | 1.14E-02 | 0.077 | 1.54E-01 | 0.159 | 3.13E-03 | 0.194 | 2.99E-04 |
| VSIG4 | 0.17 | 1.58E-03 | 0.117 | 3.03E-02 | 0.196 | 2.40E-04 | 0.230 | 1.65E-05 | |
| MS4A4A | 0.194 | 2.82E-04 | 0.236 | 9.04E-06 | 0.207 | 1.04E-04 | 0.234 | 1.16E-05 | |
| Dendritic cell | HLA-DPB1 | 0.258 | 1.22E-06 | 0.25 | 2.61E-06 | 0.297 | 1.77E-08 | 0.277 | 1.78E-07 |
| HLA-DQB1 | 0.231 | 1.53E-05 | 0.245 | 3.96E-06 | 0.28 | 1.29E-07 | 0.253 | 1.92E-06 | |
| HLA-DRA | 0.295 | 2.47E-08 | 0.236 | 9.26E-06 | 0.287 | 5.95E-08 | 0.309 | 4.35E-09 | |
| HLA-DPA1 | 0.256 | 1.41E-06 | 0.203 | 1.47E-04 | 0.264 | 6.75E-07 | 0.290 | 4.35E-08 | |
| CD1C | 0.202 | 1.59E-04 | 0.159 | 3.00E-02 | 0.187 | 4.88E-04 | 0.171 | 1.46E-03 | |
| NRP1 | 0.224 | 2.73E-05 | 0.141 | 8.74E-03 | 0.177 | 9.40E-04 | 0.274 | 2.45E-07 | |
| ITGAX | 0.442 | 6.51E-18 | 0.408 | 2.98E-15 | 0.445 | 3.51E-18 | 0.467 | 4.50E-20 | |
Correlation analysis between the expression of CDCAs and immune cell biomarker genes in LIHC patients via TIMER 2.0 analysis.
Bold values indicate p < 0.05.
Co-Expression and Interaction of Cell Division Cycle Associateds in Hepatocellular Carcinoma
At the genetic level, the expression correlation of the four member genes of CDCA1/3/5/8 in liver cancer patients was analyzed using cBioPortal. According to our results, the Pearson correlation coefficients ranged from 0.85–0.90, indicating a strong correlation between the expression patterns of these four CDCAs in LIHC (Figure 7A). The GeneMANIA dataset was used to explore the co-expression of CDCAs with other biomolecules. Here, we found that there are physical interactions between CDCA1, CDCA3, CDCA5, and CDCA8. The interaction network of CDCAs and the 20 most frequently neighboring genes are shown in Figure 7B. The top five CDCAs neighboring genes in LIHC were SGO2, NDC80, BIRC5, INCENP, and PLOD1.
FIGURE 7
Discussion
With high mortality and poor prognosis, LIHC has become the fourth leading cause of cancer-related deaths worldwide (). Most of the LIHC patients missed the best treatment period because of the untimely diagnosis. For others, even if they are temporarily cured, they have to face a very low prognostic survival rate and a very high risk of recurrence. Based on the characteristics of abnormal proliferation and uncontrolled growth of tumor cells. CDCA genes, which are responsible for regulating the cell cycle and proliferation, were selected as our research object to explore the mechanism of hepatocarcinogenesis. Through a series of bioinformatics analysis methods and the use of publicly accessible online databases, including Oncomine, Kaplan-Meier plotter, GEPIA, GeneMANIA, cBioPortal, and TIMER 2.0, we investigated the expression profiles of CDCA family genes in LIHC and corresponding normal tissues, and the effect of CDCAs expression on the survival of prognosis and immune cell infiltration. In addition, we also analyzed the expression correlation of CDCAs and screened the neighboring genes related to functional CDCAs.
We found that the expression levels of CDCA1/3/5/8 were significantly increased in LIHC, regardless of stage, sex, race, drinking behavior, and other clinical factors. CDCAs expression was significantly correlated with poor prognosis of OS, DSS, RFS, and PFS and was positively correlated with the infiltration of dendritic cells, B cells, and macrophages. We also found that the most relevant neighboring genes to CDCAs in LIHC were SGO2, NDC80, BIRC5, INCENP, and PLOD1. In general, our work suggests that CDCA1/3/5/8 has the potential to be a diagnostic gene in hepatocarcinogenesis and prognostic biomarkers for LIHC patients.
The CDCA family consists of eight independent individuals named CDCA1–8. To clarify the role of CDCAs in LIHC, multiple database analysis was performed, and CDCA1/3/5/8 was found to be highly expressed in LIHC tissue. Moreover, this active expression of CDCAs was observed in all stages of LIHC, indicating that CDCA1/3/5/8 has potential as a diagnostic gene for the occurrence and development of LIHC. Similarly, CDCA has been shown to be highly expressed in many other cancer types, such as breast cancer and lung cancer, indicating its wide applicability and functional conservation. However, there was no significant upregulation of CDCAs in leukemia, suggesting that it is necessary to distinguish the types of cancer when they were used as diagnostic genes.
According to previous reports, CDCA1, also known as Nuf2, is mainly responsible for regulating cell mitosis (Zhang et al., 2015). Downregulation of CDCA1 expression can inhibit the proliferation of tumor cells, while overexpression of CDCA1 is associated with poor prognosis (). CDCA3 has been shown to promote cell proliferation and invasion through activation of the Ras signaling pathway or hypomethylation in gastric cancer cells (Zhang et al., 2019). CDCA5 plays important roles in migration, proliferation, apoptosis, and invasion of tumor cells by regulating sister chromatid segregation and cohesion (Xu et al., 2019). CDCA8 is an integral part of the chromosomal passenger complex, which is involved in mitosis and contributes to distant metastasis of cancer cells (). It is worth noting that the high expression of these four genes has been proven to reduce the prognostic survival rate of many cancer patients. This is consistent with the results of our study. In particular, there is a significant negative correlation between CDCAs and four common prognostic indices of OS, DSS, RFS, and PFS, and this correlation is applicable to different clinical factors, suggesting that high expression of CDCAs may be one of the causes of poor prognosis. These biomolecules have the potential to be prognostic biomarkers for LIHC patients.
However, in the presence of pathological conditions, such as hepatitis virus or vascular invasion, there was no correlation between CDCAs and OS, except for CDCA8, suggesting that we should consider the patient’s clinical condition when selecting the diagnostic gene. In addition, we found that the alteration frequency of CDCAs is extremely high, and the genetic alteration will reduce the prognosis survival of LIHC patients. The factors causing gene alteration should be avoided in the process of treatment, and the degree of an alteration should be properly considered when detecting expression and evaluating prognosis.
Dendritic cells are special antigen-presenting cells that play a major role in activating T lymphocytes with anti-tumor effects (Wculek et al., 2020). B cells can produce a kind of IgG antibody to recognize a certain antigen in tumor tissue, which can inhibit tumor growth (). Macrophages were divided into M1 macrophages and M2 macrophages. M1 macrophages are mainly related to the recognition and attack of tumor cells, while M2 macrophages are related to tumor progression and immunosuppression (Yang and Zhang, 2017; ). CDCAs showed a significant positive correlation with dendritic cells, B cells, and macrophages, indicating that CDCA-mediated hepatocarcinogenesis might mobilize the activity of these immune cells and make them play an anti-tumor role. When we further analyzed the relationship between CDCA1/3/5/8 expression and the biomarker genes of immune cells, we found a significant positive correlation between CDCAs expression and all test biomarkers of B cells and dendritic cells. However, for M1 macrophages and M2 macrophages, CDCAs were only related to some of macrophages biomarker genes, indicating that there is a certain specificity and selectivity in this interaction, which also provides some basis for immunotherapy in the future.
Although these four genes have some differences in function and target genes (pathways), they jointly regulate the cell division cycle to promote the proliferation and invasion of tumor cells. The Pearson correlation coefficients of these four genes were all greater than 0.85. GeneMANIA analysis showed twenty neighboring genes to CDCAs, and the functions of these genes are also related to cell cycle regulation. For example, SGO1 is considered to play a major role in recruiting the chromosomal passenger complex to chromosomes (); SGO2 is a pericentromeric protein that associates with cohesin at centromeres and regulates chromosomal segregation during meiosis (). SGO1/2 functions as an essential protector for centromeric cohesion and is required for accurate chromosome segregation during mitosis and meiosis (). PLOD1 has been reported to function in extracellular matrix formation and is involved in various diseases, including cancer (Wang et al., 2018). The NDC80 complex, including the main elements of NDC80, SPC24, and SPC25, is highly expressed in various tumors and cooperatively promotes the invasion and metastasis of tumor cells (; Umbreit et al., 2012). BIRC5 is a negative regulatory protein that inhibits tumor cell apoptosis and promotes cell proliferation (; ).
These proteins are more or less involved in the development of tumors, which explains the mechanism of CDCA-mediated hepatocarcinogenesis to a certain extent. This also screened out some targets for future research on new therapeutic methods. However, the specific roles of CDCAs in tumorigenesis and development, as well as their interaction with target proteins need to be further verified. The same shortcomings run through our research because the results were based on big data mining and analysis, which inevitably led to some false-positive results. An important purpose was to provide researchers with a more instructive research idea and tried to make our findings point out a direction for future research. Although we mined the data as comprehensively as possible and had obtained some meaningful conclusions, the relevant results still require further experimental and clinical verification.
Statements
Data availability statement
The original contributions presented in the study are included in the article/Supplementary Material, further inquiries can be directed to the corresponding authors.
Ethics statement
Ethical review and approval was not required for the study on human participants in accordance with the local legislation and institutional requirements. The patients/participants provided their written informed consent to participate in this study.
Author contributions
XL and X-WX contributed to the concept and wrote the manuscript. S-SJ, S-JK, Z-LK, and JL designed experiments, performed experiments, and analyzed data. S-SJ and S-JK contributed equally to this study.
Funding
This work was supported by 2019 Doctor Initiation Fund of Guizhou University of Chinese Medicine (3043-043190019) and Research Initiation Foundation for Doctor of Henan Agricultural University (30602107).
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
References
1
AlushinG. M.MusinipallyV.MatsonD.TooleyJ.StukenbergP. T.NogalesE. (2012). Multimodal microtubule binding by the Ndc80 kinetochore complex. Nat. Struct. Mol. Biol.19, 1161–1180. 10.1038/nsmb.2411
2
BonnerM. K.HaaseJ.SaundersH.GuptaH.LiB.KellyA. E. (2020). The borealin dimerization domain interacts with Sgo1 to drive aurora B-mediated spindle assembly. Mol. Biol. Cell.31, 2207–2218. 10.1091/mbc.E20-05-0341
3
BrayF.FerlayJ.SoerjomataramI.SiegelR. L.TorreL. A.JemalA. (2018). Global cancer statistics 2018: GLOBOCAN estimates of incidence and mortality worldwide for 36 cancers in 185 countries. CA Cancer J. Clin.68, 394–424. 10.3322/caac.21492
4
ChenC.ChenS.LuoM.YanH.PangL.ZhuC.et al (2020a). The role of the CDCA gene family in ovarian cancer. Ann. Transl. Med.8, 190. 10.21037/atm.2020.01.99
5
ChenC.ChenS.PangL.YanH.LuoM.ZhaoQ.et al (2020b). Analysis of the expression of cell division cycle-associated genes and its prognostic significance in human lung carcinoma: a review of the literature databases. Biomed. Res. Int.2020, 1–14. 10.1155/2020/6412593
6
ChoM.LeeO.-H.ChangE. M.LeeS.MoonS.LeeJ.et al (2020). BIRC5 expression is regulated in uterine epithelium during the estrous cycle. Genes11, 282–295. 10.3390/genes11030282
7
CollinsI.GarrettM. D. (2005). Targeting the cell division cycle in cancer: CDK and cell cycle checkpoint kinase inhibitors. Curr. Opin. Pharmacol.5, 366–373. 10.1016/j.coph.2005.04.009
8
DanaherP.WarrenS.DennisL.D’AmicoL.WhiteA.DisisM. L.et al (2017). Gene expression markers of tumor infiltrating leukocytes. J. Immunother. Cancer5, 18–32. 10.1186/s40425-017-0215-8
9
DudasA.AhmadS.GreganJ. (2011). Sgo1 is required for co-segregation of sister chromatids during achiasmate meiosis I. Cell cycle10, 951–955. 10.4161/cc.10.6.15032
10
ElY. W.BuffinE.CladièreD.GryaznovaY.BerenguerI.TouatiS. A.et al (2017). Mps1 kinase-dependent Sgo2 centromere localisation mediates cohesin protection in mouse oocyte meiosis I. Nat. Commun.8, 1–15. 10.1038/s41467-017-00774-3
11
GaoJ.LindsayJ.WattS.BahceciI.LukasseP.AbeshouseA.et al (2016). Abstract 5277: The cBioPortal for cancer genomics and its application in precision oncology. Cancer Res.76, 5277. 10.1158/1538-7445.AM2016-5277
12
GishR. G.LencioniR.Di BisceglieA. M.RaoulJ. L.MazzaferroV. (2016). Role of the multidisciplinary team in the diagnosis and treatment of hepatocellular carcinoma. Expert Rev. Gastroenterol. Hepatol.6, 173–185. 10.1586/egh.11.105
13
HuP.ShangguanJ.ZhangL. (2015). Downregulation of NUF2 inhibits tumor growth and induces apoptosis by regulating lncRNA AF339813. Int. J. Clin. Exp. Pathol.8, 2638–2648. 10.1287/orsc.12.5.599.10094
14
JeonT.-W.KoM. J.SeoY.-R.BaikI. H.HwangI.RyooH.-M.et al (2017). Abstract 3113: Knockdown of cell division cycle-associated 8 (CDCA8) suppresses hepatocellular carcinoma growth via the upregulation of tumor suppressor ATF3. Cancer Res.77, 3113. 10.1158/1538-7445.AM2017-3113
15
LiQ.SongH.Teitz-TennenbaumS.DonaldE. J.LiM.ChangA. E. (2009). In vivo sensitized and in vitro activated B cells mediate tumor regression in cancer adoptive immunotherapy. J. Immunol.183, 3195–3203. 10.4049/jimmunol.0803773
16
LiB.SeversonE.PignonJ. C.ZhaoH.LiT.NovakJ.et al (2016). Comprehensive analyses of tumor immunity: implications for cancer immunotherapy. Genome Biol.17, 174–189. 10.1186/s13059-016-1028-7
17
LiT.FanJ.WangB.TraughN.ChenQ.LiuJ. S.et al (2017). TIMER: A web server for comprehensive analysis of tumor-infiltrating immune cells. Cancer Res.77, 108–110. 10.1158/0008-5472.CAN-17-0307
18
LlovetJ. M.MontalR.SiaD.FinnR. S. (2018). Molecular therapies and precision medicine for hepatocellular carcinoma. Nat. Rev. Clin. Oncol.15, 599–616. 10.1038/s41571-018-0073-4
19
MakarovaR. O. V.AltekruseS. F.McNeelT. S.UlahannanS.DuffyA. G.GraubardB. I.et al (2016). Population attributable fractions of risk factors for hepatocellular carcinoma in the United States. Cancer122, 1757–1765. 10.1002/cncr.29971
20
PangR. W. C.JohJ. W.JohnsonP. J.MondenM.PawlikT. M.PoonR. T. P.et al (2008). Biology of hepatocellular carcinoma. Ann. Surg. Oncol.15, 962–971. 10.1245/s10434-007-9730-z
21
PhanN. N.WangC. Y.LiK. L.ChenC. F.ChiaoC. C.YuH. G.et al (2018). Distinct expression of CDCA3, CDCA5, and CDCA8 leads to shorter relapse free survival in breast cancer patient. Oncotarget9, 6977–6992. 10.18632/oncotarget.24059
22
RhodesD. R.Kalyana-SundaramS.MahavisnoV.VaramballyR.YuJ.BriggsB. B.et al (2007). Oncomine 3.0: genes, pathways, and networks in a collection of 18,000 cancer gene expression profiles. Neoplasia9, 166–180. 10.1593/neo.07112
23
SchütteK.BornscheinJ.MalfertheinerP. (2009). Hepatocellular carcinoma-epidemiological trends and risk factors. Dig. Dis.27, 80–92. 10.1159/000218339
24
ShapouriM. A.MohammadianS.VaziniH.TaghadosiM.EsmaeiliS. A.MardaniF.et al (2018). Macrophage plasticity, polarization, and function in health and disease. J. Cell. Physiol.233, 6425–6440. 10.1002/jcp.26429
25
ShiJ.TanS. Y.LeeA.ZhangS.SasidharanS. L.WongB.et al (2020). Restoring apoptosis dysregulation using survivin inhibitor in nasopharyngeal cancer. Head Neck42, 913–923. 10.1002/hed.26068
26
TangZ.LiC.KangB.GaoG.LiC.ZhangZ. (2017). GEPIA: a web server for cancer and normal gene expression profiling and interactive analyses. Nucleic Acids Res.45, 98–102. 10.1093/nar/gkx247
27
UmbreitN. T.GestautD. R.TienJ. F.VollmarB. S.GonenT.AsburyC. L.et al (2012). From the Cover: The Ndc80 kinetochore complex directly modulates microtubule dynamics. Proc. Natl. Acad. Sci. U.S.A.109, 16113–16118. 10.1073/pnas.1209615109
28
WangD.ZhangS.ChenF. (2018). High expression of PLOD1 drives tumorigenesis and affects clinical outcome in gastrointestinal carcinoma. Genet. Test. Mol. Biomarkers22, 366–373. 10.1089/gtmb.2018.0009
29
WangH. Y.YeL.XingZ.LiH. Q.LvT. F.LiuH. B.et al (2019). CDCA7 promotes lung adenocarcinoma proliferation via regulating the cell cycle. Pathol. Res. Pract.215, 152559. 10.1016/j.prp.2019.152559
30
WculekS. K.CuetoF. J.MujalA. M.MeleroI.KrummelM. F.SanchoD. (2020). Dendritic cells in cancer immunology and immunotherapy. Nat. Rev. Immunol.20, 7–24. 10.1038/s41577-019-0210-z
31
XuJ.ZhuC.YuY.WuW.CaoJ.LiZ.et al (2019). Systematic cancer-testis gene expression analysis identified CDCA5 as a potential therapeutic target in esophageal squamous cell carcinoma. EBioMedicine46, 54–65. 10.1016/j.ebiom.07.03010.1016/j.ebiom.2019.07.030
32
YangL. Y.FangF.OuD. P.WuW.ZengZ. J.WuF. (2009). Solitary large hepatocellular carcinoma: a specific subtype of hepatocellular carcinoma with good outcome after hepatic resection. Ann. Surg.249, 118–123. 10.1097/SLA.0b013e3181904988
33
YangL.ZhangY. (2017). Tumor-associated macrophages: from basic research to clinical application. J. Hematol. Oncol.10, 1–12. 10.1186/s13045-017-0430-2
34
ZhangB. H.YangB. H.TangZ. Y. (2004). Randomized controlled trial of screening for hepatocellular carcinoma. J. Cancer Res. Clin. Oncol.130, 417–422. 10.1007/s00432-004-0552-0
35
ZhangT.ZhouY.QiS. T.WangZ. B.QianW. P.OuyangY. C.et al (2015). Nuf2 is required for chromosome segregation during mouse oocyte meiotic maturation. Cell cycle14, 2701–2710. 10.1080/15384101.2015.1058677
36
ZhangY.YinW.CaoW.ChenP. S.BianL. J.NiQ. F. (2019). CDCA3 is a potential prognostic marker that promotes cell proliferation in gastric cancer. Oncol. Rep.41, 2471–2481. 10.3892/or.2019.7008
Summary
Keywords
CDCA, hepatocellular carcinoma, biomarkers, prognosis, tumor immunity
Citation
Jiang S-S, Ke S-J, Ke Z-L, Li J, Li X and Xie X-W (2021) Cell Division Cycle Associated Genes as Diagnostic and Prognostic Biomarkers in Hepatocellular Carcinoma. Front. Mol. Biosci. 8:657161. doi: 10.3389/fmolb.2021.657161
Received
22 January 2021
Accepted
08 February 2021
Published
11 March 2021
Volume
8 - 2021
Edited by
Hongming Miao, Army Medical University, China
Reviewed by
Huai-Qiang Ju, Sun Yat-Sen University, China
Xiawei Wei, West China Hospital, Sichuan University, China
Updates
Copyright
© 2021 Jiang, Ke, Ke, Li, Li and Xie.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Xiang Li, lixiang0217@126.com; Xing-Wei Xie, xiexingwei123@163.com
† These authors have contributed equally to this work
This article was submitted to Molecular Diagnostics and Therapeutics, a section of the journal Frontiers in Molecular Biosciences
Disclaimer
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.