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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Mol. Biosci.</journal-id>
<journal-title>Frontiers in Molecular Biosciences</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Mol. Biosci.</abbrev-journal-title>
<issn pub-type="epub">2296-889X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="publisher-id">789889</article-id>
<article-id pub-id-type="doi">10.3389/fmolb.2022.789889</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Molecular Biosciences</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Metabolomics and its Applications in Cancer Cachexia</article-title>
<alt-title alt-title-type="left-running-head">Cui et&#x20;al.</alt-title>
<alt-title alt-title-type="right-running-head">Metabolomic Applications in Cancer Cachexia</alt-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Cui</surname>
<given-names>Pengfei</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1453049/overview"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Li</surname>
<given-names>Xiaoyi</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Huang</surname>
<given-names>Caihua</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Li</surname>
<given-names>Qinxi</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1259040/overview"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Lin</surname>
<given-names>Donghai</given-names>
</name>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
<xref ref-type="corresp" rid="c001">&#x2a;</xref>
<uri xlink:href="https://loop.frontiersin.org/people/176971/overview"/>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>College of Food and Pharmacy</institution>, <institution>Xuchang University</institution>, <addr-line>Xuchang</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Xuchang Central Hospital</institution>, <addr-line>Xuchang</addr-line>, <country>China</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>Department of Physical Education</institution>, <institution>Xiamen University of Technology</institution>, <addr-line>Xiamen</addr-line>, <country>China</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>State Key Laboratory of Cellular Stress Biology</institution>, <institution>School of Life Sciences</institution>, <institution>Xiamen University</institution>, <addr-line>Xiamen</addr-line>, <country>China</country>
</aff>
<aff id="aff5">
<sup>5</sup>
<institution>Key Laboratory for Chemical Biology of Fujian Province</institution>, <institution>MOE Key Laboratory of Spectrochemical Analysis and Instrumentation</institution>, <institution>College of Chemistry and Chemical Engineering</institution>, <institution>Xiamen University</institution>, <addr-line>Xiamen</addr-line>, <country>China</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>
<bold>Edited by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/13413/overview">Wolfram Weckwerth</ext-link>, University of Vienna, Austria</p>
</fn>
<fn fn-type="edited-by">
<p>
<bold>Reviewed by:</bold> <ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/1076516/overview">Cheng Guo</ext-link>, Zhejiang University, China</p>
<p>
<ext-link ext-link-type="uri" xlink:href="https://loop.frontiersin.org/people/407221/overview">Jian-Bo Wan</ext-link>, University of Macau, China</p>
</fn>
<corresp id="c001">&#x2a;Correspondence: Donghai Lin, <email>dhlin@xmu.edu.cn</email>
</corresp>
<fn fn-type="other">
<p>This article was submitted to Metabolomics, a section of the journal Frontiers in Molecular Biosciences</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>07</day>
<month>02</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>9</volume>
<elocation-id>789889</elocation-id>
<history>
<date date-type="received">
<day>05</day>
<month>10</month>
<year>2021</year>
</date>
<date date-type="accepted">
<day>17</day>
<month>01</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2022 Cui, Li, Huang, Li and Lin.</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Cui, Li, Huang, Li and Lin</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these&#x20;terms.</p>
</license>
</permissions>
<abstract>
<p>Cancer cachexia (CC) is a complicated metabolic derangement and muscle wasting syndrome, affecting 50&#x2013;80% cancer patients. So far, molecular mechanisms underlying CC remain elusive. Metabolomics techniques have been used to study metabolic shifts including changes of metabolite concentrations and disturbed metabolic pathways in the progression of CC, and expand further fundamental understanding of muscle loss. In this article, we aim to review the research progress and applications of metabolomics on CC in the past decade, and provide a theoretical basis for the study of prediction, early diagnosis, and therapy of&#x20;CC.</p>
</abstract>
<kwd-group>
<kwd>cancer cachexia</kwd>
<kwd>metabolomics</kwd>
<kwd>metabolic alterations</kwd>
<kwd>progress</kwd>
<kwd>biomarker</kwd>
</kwd-group>
</article-meta>
</front>
<body>
<sec id="s1">
<title>Introduction</title>
<p>Cancer cachexia (CC) is a multifactorial syndrome, which is characterized by disturbed metabolism, declined body weight, depleted muscle mass, and reduced food intake (<xref ref-type="bibr" rid="B27">Evans et&#x20;al., 2008</xref>; <xref ref-type="bibr" rid="B30">Fearon et&#x20;al., 2011</xref>). Overall, CC affects approximately 50&#x2013;80% of cancer patients and leads to around 30% of mortality, with the highest incidence reported in gastrointestinal and pancreatic cancers (<xref ref-type="bibr" rid="B50">Loberg et&#x20;al., 2007</xref>; <xref ref-type="bibr" rid="B42">Kumar et&#x20;al., 2010</xref>). Lately, four stages of CC have been proposed to define the guidelines (<xref ref-type="bibr" rid="B15">Bozzetti and Mariani, 2009</xref>; <xref ref-type="bibr" rid="B10">Blum et&#x20;al., 2010</xref>). Initially, CC begins in a pre-cachexia stage with unwitting body weight loss, along with a more severe and noninvertible fat tissues and skeletal muscles loss, followed by disturbances in metabolic pathway and immune system, ultimately resulting in death (<xref ref-type="bibr" rid="B38">Hamerman, 2002</xref>; <xref ref-type="bibr" rid="B20">Deans et&#x20;al., 2009</xref>).</p>
<p>Declined body weight primarily arise from skeletal muscle loss, which is recognized as the major feature of CC. Muscle loss makes routine activities difficult and results in tiredness, in addition to the tremendous damage to quality of life and poor response to surgery or chemotherapy (<xref ref-type="bibr" rid="B51">Lok, 2015</xref>). Study showed that treatment on skeletal muscle loss could not only attenuate the symptoms of CC, but also remarkably prolongs lifespan (<xref ref-type="bibr" rid="B113">Zhou et&#x20;al., 2010</xref>). Previous studies have found that CC is linked to various factors including fasting hormones, pro-inflammatory cytokines, such as interleukin 1 (IL-1), tumor necrosis factor-alpha (TNF-&#x3b1;), interferon-gamma (IFN-&#x3b3;) (<xref ref-type="bibr" rid="B59">Nagaya et&#x20;al., 2006</xref>; <xref ref-type="bibr" rid="B36">Gupta et&#x20;al., 2011</xref>; <xref ref-type="bibr" rid="B3">Argiles et&#x20;al., 2013</xref>; <xref ref-type="bibr" rid="B4">Argiles and Stemmler, 2013</xref>). The two main cell proteolysis pathways including ubiquitin-proteasome pathway and autophagy pathway regulate protein turnover in muscle tissues (<xref ref-type="bibr" rid="B13">Bonaldo and Sandri, 2013</xref>; <xref ref-type="bibr" rid="B37">Halle et&#x20;al., 2020</xref>; <xref ref-type="bibr" rid="B49">Lim et&#x20;al., 2020</xref>; <xref ref-type="bibr" rid="B110">Yang et&#x20;al., 2020</xref>). In addition, several major signaling pathways including IGF1-Akt-FoxO pathway, TGF&#x3b2;-myostatin pathway, NF-&#x3ba;B signaling, and glucocorticoids pathway have all been implicated in muscle atrophy of CC (<xref ref-type="bibr" rid="B11">Bodine et&#x20;al., 2001</xref>; <xref ref-type="bibr" rid="B58">Musaro et&#x20;al., 2001</xref>; <xref ref-type="bibr" rid="B46">Lee, 2004</xref>; <xref ref-type="bibr" rid="B82">Sandri et&#x20;al., 2004</xref>; <xref ref-type="bibr" rid="B104">Waddell et&#x20;al., 2008</xref>; <xref ref-type="bibr" rid="B69">Peterson et&#x20;al., 2011</xref>). Identification of signaling pathways associated with CC and muscle atrophy has achieved great progress in recent decades. Given that CC is a typical metabolic syndrome, metabolomic techniques can be applied to explore biomarkers for early diagnosis of CC, address metabolic characteristics for mechanistic understanding of the pathogenesis of CC, and develop therapeutics strategies for treatments of&#x20;CC.</p>
<p>As an omics technology developing after genomics, transcriptomics and proteomics, metabolomics has rapid developments at present, which can simultaneously analyze all of metabolites with small molecular weights in a biological system (<xref ref-type="bibr" rid="B61">Newgard, 2017</xref>). Compared to genomics, transcriptomics and proteomics, metabolomics is based on extensively used detection equipment including either mass spectrometry (MS) or nuclear magnetic resonance spectroscopy (NMR), which has the features of high sensitivity, high precision, good resolution, and small sample volume (<xref ref-type="bibr" rid="B6">Beckonert et&#x20;al., 2007</xref>; <xref ref-type="bibr" rid="B52">Ma et&#x20;al., 2018</xref>). In the last 2&#xa0;decades, metabolomic techniques have been extensively used to exploring various diseases such as cancer (<xref ref-type="bibr" rid="B106">Wishart, 2016</xref>; <xref ref-type="bibr" rid="B84">Schmidt et&#x20;al., 2021</xref>), type 2 diabetes (<xref ref-type="bibr" rid="B60">Newgard et&#x20;al., 2009</xref>; <xref ref-type="bibr" rid="B52">Ma et&#x20;al., 2018</xref>), fatty liver (<xref ref-type="bibr" rid="B35">Gao et&#x20;al., 2009</xref>; <xref ref-type="bibr" rid="B44">Lallukka and Yki-Jarvinen, 2016</xref>), and cardiovascular diseases (<xref ref-type="bibr" rid="B86">Shah et&#x20;al., 2012a</xref>; <xref ref-type="bibr" rid="B87">Shah et&#x20;al., 2012b</xref>).</p>
<p>Metabolomic techniques create ideas and clues for scholars to predict and screen CC at early stage. Recently, researchers have applied metabolomic analysis to perform global and in-depth studies for identifying metabolic signatures in patients or animal models or cell models with CC, and also for identifying potential biomarkers and crucial metabolic pathways to mechanistically understand the pathogenesis of CC. We searched for articles from PubMed, Scopus and Google Scholar relevant to cancer cachexia by using the keywords &#x201c;cancer cachexia and metabolomics,&#x201d; &#x201c;cancer cachexia and metabonomics,&#x201d; &#x201c;cancer cachexia and metabolic,&#x201d; &#x201c;muscle atrophy and metabolomics,&#x201d; &#x201c;muscle loss and metabolomics&#x201d; and so on. We have only included the studies based on the animal models or clinical samples related to CC by using metabolomics methodologies. So far, only two reviews of omics studies on CC have been reported (<xref ref-type="bibr" rid="B34">Gallagher et&#x20;al., 2016</xref>; <xref ref-type="bibr" rid="B97">Twelkmeyer et&#x20;al., 2017</xref>). However, these reviews did not pay much attention to the field of metabolomics. To widely expand the knowledge of CC and give inspirations for the cachexia studies from the view of biomarkers, signatures and therapeutic targets, we focus on the progress made in the past decade, novel developments, and latest discoveries in the study of CC using metabolomic techniques, and look forward to its future developments. To the best of our knowledge, this article presents the first review on the progress of metabolomic applications in&#x20;CC.</p>
</sec>
<sec id="s2">
<title>Metabolomic Research Methodologies and Techniques</title>
<p>Followed by genomics, transcriptomics, and proteomics, metabolomics is a promising subject that has promptly developed in recent years. It can be qualitatively and quantitatively employed to analyze various sample sources, which include cells or tissues extract, bio-fluids, and microorganisms caused by genetically engineered or drug treatment. Metabolomic analyses usually focus on small molecular metabolites such as amino acids, lipids, small molecular peptides, and organic acids with a relative molecular weight of less than 1,000&#xa0;Da (<xref ref-type="bibr" rid="B63">Nicholson et&#x20;al., 1999</xref>; <xref ref-type="bibr" rid="B31">Fiehn et&#x20;al., 2000</xref>; <xref ref-type="bibr" rid="B107">Xia and Wan, 2021</xref>). Generally, metabolomics includes two tools: non-targeted and targeted metabolomics. Non-targeted metabolomics is most widely used in CC studies to explore biomarkers (<xref ref-type="bibr" rid="B109">Yang et&#x20;al., 2018</xref>), signatures (<xref ref-type="bibr" rid="B19">Cui et&#x20;al., 2019b</xref>), and therapeutic targets (<xref ref-type="bibr" rid="B33">Fukawa et&#x20;al., 2016</xref>). The process of metabolomic analysis in CC is depicted in <xref ref-type="fig" rid="F1">Figure&#x20;1</xref>, which contains sample sources, analytical platforms, data collection and analysis, biomarkers identification, metabolic pathways exploration, and biological significance elucidation.</p>
<fig id="F1" position="float">
<label>FIGURE 1</label>
<caption>
<p>Metabolomics analysis workflow. Abbreviations: NMR, nuclear magnetic resonance; CE, capillary electrophoresis; GC, gas chromatography; LC, liquid chromatography; MS, mass spectrometry.</p>
</caption>
<graphic xlink:href="fmolb-09-789889-g001.tif"/>
</fig>
<sec id="s2-1">
<title>Sample Sources</title>
<p>The most commonly used type of samples for metabolomic studies in CC are serum/plasma, urine, tumor tissues, liver and skeletal muscle, and other tissues. The collected blood samples are further processed with cell separation to obtain sera and plasma at 4&#xb0;C before analysis. This step might be one of the major factors of pre-analysis errors in blood metabolomics research (<xref ref-type="bibr" rid="B6">Beckonert et&#x20;al., 2007</xref>; <xref ref-type="bibr" rid="B64">Nikolic et&#x20;al., 2014</xref>). It is generally suggested that the interval between blood sample collection and cell separation should be finished in 35&#xa0;min to avoid the increased lactate levels. In addition, repeated freezing and thawing steps should be avoided in the whole experiment (<xref ref-type="bibr" rid="B111">Yin et&#x20;al., 2015</xref>). Compared with blood samples, the biological composition of urine samples is relatively simple, the protein content is low, and additional metabolite extraction steps are not usually required. The commonly used pretreatment method for skeletal muscle and tumor tissues in CC studies is liquid-liquid extraction. In general, tissue samples are initially extracted with cold solutions which contains chloroform, methanol and water in a certain ratio to generate a two-phase system. The polar and non-polar metabolites are separated, lyophilized and dissolved in corresponding solvents, respectively (<xref ref-type="bibr" rid="B40">Jonsson et&#x20;al., 2005</xref>; <xref ref-type="bibr" rid="B6">Beckonert et&#x20;al., 2007</xref>; <xref ref-type="bibr" rid="B47">Legido-Quigley et&#x20;al., 2010</xref>).</p>
</sec>
<sec id="s2-2">
<title>Data Collection Techniques</title>
<p>Metabolomic techniques are applied to measure the number, type, condition, and level of metabolites and to explore metabolic profiles (<xref ref-type="bibr" rid="B6">Beckonert et&#x20;al., 2007</xref>). Compared to other detection techniques, NMR and MS are the two mostly used techniques for metabolomic analysis (<xref ref-type="bibr" rid="B26">Emwas, 2015</xref>).</p>
<p>NMR technology is a spectroscopic technology that uses different atomic nuclei to absorb ratio-frequency radiation with different resonance frequencies, which are converted into molecular chemistry and structural information related to environments of the nuclei (<xref ref-type="bibr" rid="B14">Bothwell and Griffin, 2011</xref>). With the development of NMR technology, researchers can directly analyze intact gastrocnemius muscle without any pretreatment of samples by using high-resolution magic angle rotation (HRMAS-NMR) spectroscopy in a CC mouse model (<xref ref-type="bibr" rid="B74">Yang et&#x20;al., 2015</xref>). Overall, NMR spectroscopy has many advantages such as simple sample preparation, non-invasive and unbiased measurement of the sample, good objectivity and reproducibility (<xref ref-type="bibr" rid="B48">Li et&#x20;al., 2015</xref>). However, signal overlap and low sensitivity are two obvious shortcomings in complicated <sup>1</sup>H-NMR spectra.</p>
<p>MS spectroscopy uses electric and magnetic fields to separate moving ions and detect them according to the mass-to-charge ratio (m/z) (<xref ref-type="bibr" rid="B96">Tsiropoulou et&#x20;al., 2017</xref>). At present, MS combined with chromatography are divided into three types including capillary electrophoresis-mass (CE-MS), gas chromatography-mass (GC-MS), and liquid chromatography-mass (LC-MS). CE-MS has high performance for polar and ionic compounds with high resolution and sensitivity rather than uncharged compounds (<xref ref-type="bibr" rid="B76">Ramautar et&#x20;al., 2019</xref>; <xref ref-type="bibr" rid="B90">Stolz et&#x20;al., 2019</xref>). Compared to GC and LC, CE has a superiority over them for the resolution of charged molecules along with the isomers due to the excellent separation. GC-MS is generally conducted to analyze non-polar, low-boiling and volatile molecules, and samples usually need to be derivatized. LC-MS has relatively high sensitivity and strong detection ability for polar and thermally unstable compounds, by which a wider range of metabolites with low detection limit can be analyzed. It can be used for trace analysis and is more suitable for metabolomic analysis of complex biological samples (<xref ref-type="bibr" rid="B79">R&#xf6;misch-Margl et&#x20;al., 2011</xref>; <xref ref-type="bibr" rid="B108">Xiao et&#x20;al., 2012</xref>). Cala and colleagues performed a combination of 3 types of MS (GC-MS, CE-MS, and LC-MS) to obtain plasma metabolite fingerprinting in a CC clinical study (<xref ref-type="bibr" rid="B16">Cala et&#x20;al., 2018</xref>).</p>
<p>Compared with NMR spectroscopy, MS has several advantages such as high sensitivity and resolution, which could detect thousands of metabolites in a large dynamic range at the same time. However, MS also has its own shortcomings such as complicated sample preparation and low reproducibility. The advantages and drawbacks of MS and NMR detections are listed in <xref ref-type="table" rid="T1">Table&#x20;1</xref>. To promote the entire performance of metabolomics studies, Pin and colleagues combined MS and NMR to investigate differences between CC and chemotherapy induced cachexia (<xref ref-type="bibr" rid="B70">Pin et&#x20;al., 2019</xref>).</p>
<table-wrap id="T1" position="float">
<label>TABLE 1</label>
<caption>
<p>Summarization of advantages and drawbacks of MS and NMR detections.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">Features</th>
<th align="center">NMR</th>
<th align="center">MS</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td align="left">Sample preparation</td>
<td align="left">Simple</td>
<td align="left">Complex</td>
</tr>
<tr>
<td align="left">Sample measurement</td>
<td align="left">Simple</td>
<td align="left">Complex, various chromatography methods</td>
</tr>
<tr>
<td align="left">Sample recovery</td>
<td align="left">Good, non-invasive</td>
<td align="left">Destructive</td>
</tr>
<tr>
<td align="left">Selectivity and targeted analysis capabilities</td>
<td align="left">General, mostly in untargeted analysis</td>
<td align="left">Good, untargeted and targeted analysis</td>
</tr>
<tr>
<td align="left">Sensibility</td>
<td align="left">Low, &#x3c;100 metabolites per test</td>
<td align="left">High, &#x3e;1,000 metabolites per test</td>
</tr>
<tr>
<td align="left">Resolution</td>
<td align="left">General</td>
<td align="left">General</td>
</tr>
<tr>
<td align="left">Repeatability</td>
<td align="left">High</td>
<td align="left">low</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s2-3">
<title>Data Preprocessing and Analysis</title>
<p>Data analysis includes data preprocessing, multivariate statistical analysis, model establishment and verification, and selection of difference variables, etc. Prior to obtaining metabolomics data for statistical analysis, it is necessary to preprocess the data, which mainly includes baseline correction, peak screening (peak identification, peak alignment and correction), noise filtering, missing value processing, normalization and scaling (<xref ref-type="bibr" rid="B24">Dunn et&#x20;al., 2011</xref>). Thereafter, multivariate statistical analysis is conducted to decrease the dimensionality of acquired data and extract information, including principal component analysis (PCA), clustering analysis, partial least square analysis (PLS), PLS-discriminant analysis (PLS-DA), orthogonal PLS (OPLS)-DA and random forests (RF) (<xref ref-type="bibr" rid="B39">Idborg-Bjorkman et&#x20;al., 2003</xref>; <xref ref-type="bibr" rid="B105">Wiklund et&#x20;al., 2008</xref>; <xref ref-type="bibr" rid="B92">Sugimoto et&#x20;al., 2012</xref>; <xref ref-type="bibr" rid="B85">Schwammle et&#x20;al., 2015</xref>). PCA, PLS-DA, OPLS loading plot and heatmap analysis were most commonly used in CC metabolomics studies. Besides, general statistical analyses including analysis of variance (ANOVA) and Student&#x2019;s t-test are also applied to quantitatively analyze the abundance of metabolites between different groups. When performing the multiple comparisons, the familywise error rate (FWER) might cause false-positive detection, which could be diminished by the procedures of false discovery rate (FDR) with Holm, Bonferroni and Benjamini-Hochberg corrections in metabolomic analysis (<xref ref-type="bibr" rid="B92">Sugimoto et&#x20;al., 2012</xref>; <xref ref-type="bibr" rid="B57">Muroya et&#x20;al., 2020</xref>). Overall, the combination of multivariate statistical analysis and classical statistical analysis can improve the reliability of the data analysis.</p>
</sec>
<sec id="s2-4">
<title>Data Elucidation</title>
<p>After multivariate statistical analysis, one can uncover and illustrate metabolic signatures based on several databases, including significantly altered concentrations of metabolites and certain disturbed metabolic pathways corresponding to external metabolic stimuli. These databases include HMDB (<ext-link ext-link-type="uri" xlink:href="http://www.hmdb.ca/">http://www.hmdb.ca/</ext-link>), METLIN (<ext-link ext-link-type="uri" xlink:href="https://metlin.scripps.edu/">https://metlin.scripps.edu/</ext-link>), SMPDB (<ext-link ext-link-type="uri" xlink:href="https://smpdb.ca)/">https://smpdb.ca</ext-link>), MassBank (<ext-link ext-link-type="uri" xlink:href="http://www.massbank.jp/">http://www.massbank.jp/</ext-link>), The Kyoto Encyclopedia of Genes and Genomes (KEGG; <ext-link ext-link-type="uri" xlink:href="https://www.genome.jp/kegg/">https://www.genome.jp/kegg/</ext-link>), and software such as MetaboAnalyst 5.0 (<ext-link ext-link-type="uri" xlink:href="https://www.metaboanalyst.ca/">https://www.metaboanalyst.ca/</ext-link>) (<xref ref-type="bibr" rid="B67">Pang et&#x20;al., 2021</xref>). A growing number of studies have been using MetaboAnalyst website to conduct the pathway analysis and ROC analysis in CC studies (<xref ref-type="bibr" rid="B109">Yang et&#x20;al., 2018</xref>; <xref ref-type="bibr" rid="B19">Cui et&#x20;al., 2019b</xref>; <xref ref-type="bibr" rid="B80">Sadek et&#x20;al., 2021</xref>).</p>
</sec>
</sec>
<sec id="s3">
<title>Advances in the Pathogenesis of Cancer Cachexia Based on Metabolomics</title>
<p>Skeletal muscle loss might occur in the early stage, which might be masked by dysfunction and symptoms of other tissues. Methods used to assess muscle loss involve diagnostic imaging techniques, including computed tomography (CT), dual energy X-ray absorptiometry (DXA), and magnetic resonance imaging (MRI). However, these methods are associated with several shortcomings such as time consuming, expensive, complicated, and invasive when clinicians wish to screen the early or slow muscle loss (<xref ref-type="bibr" rid="B7">Heymsfield et&#x20;al., 1997</xref>; <xref ref-type="bibr" rid="B54">Mitsiopoulos et&#x20;al., 1998</xref>; <xref ref-type="bibr" rid="B88">Shen et&#x20;al., 2004</xref>; <xref ref-type="bibr" rid="B56">Mourtzakis et&#x20;al., 2008</xref>). In order to exploit the progress of muscle loss dynamically, several methods have been developed to detect CC syndromes and shorten the period for early prevention (<xref ref-type="bibr" rid="B27">Evans et&#x20;al., 2008</xref>). Recently, metabolomic analysis is widely being applied to uncover novel biomarkers, explore certain metabolic pathways associated with the pathogenesis of various diseases including CC, and ultimately exploit potential therapeutic strategies in the future (<xref ref-type="bibr" rid="B97">Twelkmeyer et&#x20;al., 2017</xref>). Applications of metabolomics analysis in CC are depicted in <xref ref-type="fig" rid="F2">Figure&#x20;2</xref>, which cover biomarkers, signatures and therapeutic targets.</p>
<fig id="F2" position="float">
<label>FIGURE 2</label>
<caption>
<p>Metabolomics applications covering biomarkers, signatures and therapeutic targets in CC. Red, upregulated metabolites and pathways in CC group. Green, downregulated metabolites, microbes and pathways in CC&#x20;group.</p>
</caption>
<graphic xlink:href="fmolb-09-789889-g002.tif"/>
</fig>
<sec id="s3-1">
<title>Biomarkers</title>
<p>Metabolomics can be applied to detect hundreds of small metabolites simultaneously for providing better elucidation of metabolic pathways related to the pathological mechanisms of CC, ultimately identifying reliable biomarkers for diagnosis and monitoring of cachexia.</p>
<p>Metabolomics studies in CC began in 2008 relied on the classical colon-26 (C26) mouse model. Connell and colleagues demonstrated that metabolomic analysis has the ability to diagnose and discover the surrogate serum biomarkers in CC for the first time (<xref ref-type="bibr" rid="B65">O&#x27;Connell et&#x20;al., 2008</xref>). They conducted NMR-based metabolomic analysis on serum samples, and observed significant metabolic alterations including elevated amounts of very low-density lipoprotein (VLDL) and low-density lipoprotein (LDL) related to aberrant glycosylation of &#x3b2;-Dystroglycan (<xref ref-type="bibr" rid="B65">O&#x27;Connell et&#x20;al., 2008</xref>). In a recent study based on the same C26 model, Lautaoja and colleagues identified free phenylalanine in sera and muscle tissues as a promising biomarker of cachectic muscle atrophy by using GC-MS-based metabolomic analysis (<xref ref-type="bibr" rid="B45">Lautaoja et&#x20;al., 2019</xref>).</p>
<p>Furthermore, Kunz and colleagues performed untargeted LC-MS-based metabolomic analysis of plasma and skeletal muscle in a Lewis lung carcinoma (LLC) mouse model. They detected increased levels of asymmetric dimethylarginine, and NG-monomethyl-L-arginine in LLC group relative to normal group. In order to further explore the function of these two methylarginines in muscle turnover, the researchers treated the cultured myotubes with these two metabolites and found impaired muscle protein synthesis <italic>in&#x20;vitro</italic> study. Surprisingly, increased levels of asymmetric dimethylarginine were also observed in muscle tissues from clinic patients. This study not only discovered two novel potential biomarkers, but also provided therapeutic ideas for CC (<xref ref-type="bibr" rid="B43">Kunz et&#x20;al., 2020</xref>).</p>
<p>In addition, Yang and colleagues revealed dynamically changing metabolic profiles in sera and intact muscle of CC in the C26 mouse model from pre-cachexia to the refractory cachexia period. They identified five unique metabolic features including declined levels of serum glucose and BCAAs, increased levels of ketone bodies, neutral amino acids and 3-methylhistidine (<xref ref-type="bibr" rid="B74">Yang et&#x20;al., 2015</xref>). Using HRMAS-NMR spectroscopy, they performed metabolic profiling of cachectic gastrocnemius muscle for the first time. To further validate the metabolic features identified from the mouse model, recently, Yang and colleagues recruited 33&#x20;pre-cachectic, 84 cachectic and 105 cancer patients with stable body weights and 74 healthy controls, according to the international definition and classification of CC (<xref ref-type="bibr" rid="B30">Fearon et&#x20;al., 2011</xref>). They conducted NMR metabolomic analyses on sera and urine of CC patients to reveal the metabolic profile of CC, and identified 15 metabolites for discriminating different disease states (<xref ref-type="bibr" rid="B109">Yang et&#x20;al., 2018</xref>). Based on three identified metabolites (carnosine, leucine and phenyl acetate), they established a diagnostic model for predicting the presence of cachexia with high accuracy.</p>
<p>In a previous study, Fujiwara and colleagues enrolled 21 advanced pancreatic cancer patients with or without cachexia, collected serum samples at different time point, and performed GC-MS-based metabolomic analysis (<xref ref-type="bibr" rid="B32">Fujiwara et&#x20;al., 2014</xref>). They observed intraday differences in serum metabolite concentration, which were observably altered in the evening but basically identical in the daytime. Specifically, abundance of paraxanthine was significantly decreased in CC patients compared to those without cachexia all day long, which was potentially associated with cachexia. Additionally, another study performed NMR-based metabolomics analysis on 170 patients with head and neck squamous cell carcinoma cancer (HNSCC). These patients experienced radical treatments with radio-/chemo-radiotherapy (RT/CHRT) (<xref ref-type="bibr" rid="B12">Boguszewicz et&#x20;al., 2019</xref>). Boguszewicz and colleagues indicated that serum metabolic alterations primarily related to high 3-hydroxybutyrate levels could be detected at an early stage of the treatment experienced by HNSCC patients. Thus, 3-hydroxybutyrate could be exploited as a fast and sensitive biomarker of malnutrition or cachexia.</p>
<p>Similarly, Miller and colleagues conducted LC-MS-based metabolomic analysis and identified potential biomarkers related to weight loss in patients with upper gastrointestinal cancer, which could be applied for the assessment of therapeutic intervention (<xref ref-type="bibr" rid="B53">Miller et&#x20;al., 2019</xref>). Cancer patients with &#x2265;5% weight loss displayed plasma metabolic profiles distinguished from those with &#x3c;5% weight loss. Totally, six metabolites were highly discriminative of body weight loss, including lysoPC18.2 and 16:1, hexadecanoic acid, octadecanoic acid, phenylalanine.</p>
<p>Metabolites in urine samples have also been investigated to discover novel biomarkers for CC. Eisner and colleagues did the first attempt to use single time-point urinary metabolite profiles to diagnose muscle wasting occurring in CC humans (<xref ref-type="bibr" rid="B25">Eisner et&#x20;al., 2011</xref>). After analyzing 93 random urine samples from cancer patients, the researchers found that some metabolites such as creatinine and methylhistidine arising from muscle proteolysis were particularly released into urine. This study provides an inspiration that it might also be convenient, cheap and safe to detect muscle wasting based on <sup>1</sup>H-NMR urine metabolomic analysis. Overall, these results obtained from previous studies on biomarkers for CC mostly depend on the samples derived from animal models and human, and also on tumor type, bio-fluids and analytical platforms.</p>
</sec>
<sec id="s3-2">
<title>Metabolic Signatures and Metabolic Pathways</title>
<p>Although numerous researches have been exploring molecular mechanisms underlying muscle wasting in CC, the effect of muscle wasting on muscle function and metabolic signatures remains unclear (<xref ref-type="bibr" rid="B23">Diffee et&#x20;al., 2002</xref>). Metabolic impairments in the skeletal muscle are related to its physiological dysfunction. Thus, metabolic derangements might be involved in molecular mechanisms underlying protein synthesis and breakdown (<xref ref-type="bibr" rid="B93">Tisdale, 2003</xref>; <xref ref-type="bibr" rid="B83">Santarpia et&#x20;al., 2011</xref>).</p>
<p>Yang and colleagues indicated that serum metabolic disturbances associated with promoted tricarboxylic acid (TCA) cycle and amino acid metabolism were the major features of CC in C26 mouse model. Amino acids, ketone bodies and metabolites involved in TCA cycle were recognized as potential biomarkers related to the corresponding metabolic pathways (<xref ref-type="bibr" rid="B73">Quanjun et&#x20;al., 2013</xref>). Furthermore, Torossian and colleagues performed GC-MS-based and LC-MS-based metabolomic analyses to reveal metabolic distinctions between cachectic gastrocnemius muscles and control muscles in the C26 mouse model (<xref ref-type="bibr" rid="B22">Der-Torossian et&#x20;al., 2013b</xref>). They showed predominant effects of CC including: enhanced oxidative stress, impaired redox homeostasis, altered metabolite concentrations in glycolysis and declined carbon flow through TCA cycle. This study found the tumor Warburg-like metabolic pattern in skeletal muscle of CC for the first time, which is considered as novel metabolic signature in CC research.</p>
<p>Compared to malabsorption, fasting, age-induced muscle loss, and sarcopenia, CC has its own metabolic features (<xref ref-type="bibr" rid="B29">Fearon, 1992</xref>; <xref ref-type="bibr" rid="B94">Tisdale, 2009</xref>; <xref ref-type="bibr" rid="B28">Evans, 2010</xref>; <xref ref-type="bibr" rid="B78">Rolland et&#x20;al., 2011</xref>). Consistently, Torossian and colleagues performed a NMR-based metabolomic analysis of sera, and indicated that metabolic alterations including hyperlipidemia, hyperglycemia and reduced BCAAs distinguish cachexia from effects of starvation (<xref ref-type="bibr" rid="B21">Der-Torossian et&#x20;al., 2013a</xref>). Another previous study explored metabolic differences between sarcopenia and CC in senile cancer animals. The researchers conducted NMR-based metabolomic analysis dynamically on sera derived from adult and ageing rats. The metabolic alterations mostly focused in several metabolic pathways, including amino acid biosynthesis which was upregulated in the aging group and downregulated in the tumor groups (<xref ref-type="bibr" rid="B103">Viana et&#x20;al., 2020</xref>). Recently, they also performed NMR-based metabolomic analysis on gastrocnemius derived from weanling and young adult rats, aiming to explore metabolic alterations in cachectic hosts during the whole lifespan (<xref ref-type="bibr" rid="B17">Chiocchetti et&#x20;al., 2021</xref>). They indicated that the most significant variations of metabolites such as glutamate, glutamine, glycine, and methylhistidine, might be associated with the early muscle catabolism and declined energy generation in cachectic muscles.</p>
<p>Chemotherapy is widely used to cancer patients in the clinical treatment, however, growing evidences have shown that several chemotherapeutic drugs could also lead to the occurrence of cachexia and deterioration of muscle mass. To date, only one metabolomics investigation has been done in chemotherapy-induced cachexia. Based on the C26 mouse model, Pin and colleagues revealed significant differences in amino acid catabolism, TCA cycle, and &#x3b2;-oxidation between CC and chemotherapy-induced cachexia by a combination of NMR-based metabolomics with targeted MS analysis (<xref ref-type="bibr" rid="B70">Pin et&#x20;al., 2019</xref>).</p>
<p>Although skeletal muscles are the main tissue impaired dramatically in CC, other tissues such as liver and gut may also be affected and involved in the pathophysiology of this complex syndrome (<xref ref-type="bibr" rid="B77">Rohm et&#x20;al., 2019</xref>). As an essential metabolic organ, liver regulates body energy metabolism and maintains its homeostasis. Dysfunction of liver metabolism are prone to cause promoted energy consumption in CC. Furthermore, gut microbial species play key roles in nutrients supplementation, cytokines and gut hormones regulation, and gut barrier function improvement. Based on these beneficial effects, scholars are exploring if these micrograms could act as novel therapeutic targets for CC (<xref ref-type="bibr" rid="B99">Valdes et&#x20;al., 2018</xref>). Based on the C26 mouse model, P&#xf6;tgens and colleagues explored the crosstalk in four different samples including caecal, portal vein, vena cava and liver by a combination of NMR-based metabolomics with gut gene sequencing and hepatic transcriptomics. Their results showed depressed glycolysis and gluconeogenesis, activated hexosamine pathway and phosphatidylcholine pathway, reduced abundances of hepatic carnitine and caecal acetate and butyrate, and decreased levels of aromatic amino acids (<xref ref-type="bibr" rid="B71">Potgens et&#x20;al., 2021</xref>). Given that CC also induces anorexia and reduced food intake, Uzu and colleagues focused on studying metabolic signatures of brains and conducted a CE-MS-based metabolomic analysis on brain samples derived from a CC mouse model. They observed activated purine metabolism and increased xanthine oxidase activity in brains of cachexic mice relative to controls (<xref ref-type="bibr" rid="B98">Uzu et&#x20;al., 2019</xref>).</p>
<p>Ni and colleagues conducted a comprehensive analysis on 31 patients with lung cancer by a combination of plasma metabolomics and gut microbiota metagenomics (<xref ref-type="bibr" rid="B62">Ni et&#x20;al., 2021</xref>). For the first time, they explored gut microbiota functions in the clinical CC study, and observed remarkably decreased levels of BCAAs, methylhistamine, and vitamins in CC blood. They further discovered that increased levels of BCAAs and 3-oxocholic acid in non-CC blood were closely related to gut microbiota especially <italic>Prevotella copri</italic> and <italic>Lactobacillus gasseri</italic>, respectively. These results shed lights on molecular mechanisms underlying host-microbiota crosstalk in CC, and provided new strategies for preventing or treating CC through regulating gut microbiota in the future nutritional supplements.</p>
<p>Previously, preclinical mouse models (mainly C26 and LLC) were established by using subcutaneous implantation methods to conduct CC studies. Few murine models of CC with orthotopic implantation have been employed. Thus, our group established two orthotopic models including glioma cachexia and gastric cancer cachexia to mimic clinical characteristics of CC. In the first study, we conducted NMR-based metabolomic analysis to explore metabolic profiles in cachectic muscle based on a glioma induced cachexia murine model (<xref ref-type="bibr" rid="B19">Cui et&#x20;al., 2019b</xref>). Our results indicated that significantly impaired pathways including energy metabolism, muscle protein breakdown and synthesis, and profoundly increased amino acids involved in TCA cycle anaplerotic. After that, we established a gastric CC murine model and performed NMR-based metabolomic analysis of gastric tissues (tumor), blood and skeletal muscle. Cachectic mice exhibited impaired glucose and nucleic acid metabolisms in tumor, hyperlipidemia and hypoglycemia in blood, and disturbed carbohydrate and amino acid metabolism in gastrocnemius (<xref ref-type="bibr" rid="B18">Cui et&#x20;al., 2019a</xref>). Besides, we further explored the role of &#x3b1;-ketoglutarate in muscle protein turnover, and found &#x3b1;-ketoglutarate can alleviate the myotubes atrophy induced by glucose deprivation.</p>
<p>At present, only one study was performed using a combination of three metabolomics techniques (GC-MS, CE-MS, and LC-MS) to access a markedly different metabolic pattern in human plasma (<xref ref-type="bibr" rid="B16">Cala et&#x20;al., 2018</xref>). Cala and colleagues collected two groups of plasma samples from 8 cachectic and 7&#x20;non-cachectic patients (<xref ref-type="bibr" rid="B16">Cala et&#x20;al., 2018</xref>). Their results exhibited significantly decreased levels of amino acids and glycerophospholipids, and increased cortisol levels associated with cachexia. The disturbed metabolic pathways in CC included amino acid metabolism, aminoacyl-tRNA biosynthesis, fatty acid elongation, and TCA cycle. In another study, Stretch and colleagues investigated metabolic profiles of urine and plasma derived from 55&#x20;weight-losing patients by conducting NMR-based and direct injection MS-based metabolomics analyses. Their results indicated that large amounts of glycerophospholipids variations can be used to discover sarcopenia in cancer patients (<xref ref-type="bibr" rid="B91">Stretch et&#x20;al., 2012</xref>). This study addressed one main issue that the variability of tissue mass might impact metabolic profiles, and thus could provide hints for the field of nutrition and metabolism studies. Overall, numerous researchers have investigated the metabolic signatures for CC from various aspects such as starvation, sarcopenia, chemotherapy, gut microbes, orthotopic implantation and analytical platforms, in order to give clues and inspirations to better elucidate the pathogenesis of CC and therapeutic targets discovery.</p>
</sec>
<sec id="s3-3">
<title>Therapeutic Strategies by Using Metabolomics</title>
<p>As discussed above, metabolomics is being extensively used to uncover biomarkers, metabolic signatures and metabolic pathways of CC, and to exploit novel drug targets. In this section, we discuss studies on how metabolomics contributes to the discovery of new targets for therapy.</p>
<p>Gut microbiota could depress inflammation response and tumor development (<xref ref-type="bibr" rid="B8">Bindels et&#x20;al., 2012</xref>). Some researchers have been exploring the roles of gut microbiome in CC and addressing certain metabolic signatures in the last section. Bindels and colleagues performed a further study on gut microbiota with the expectation of finding novel interventions for CC treatments. They integrated gene sequencing and metabolomics as well as molecular profiling of the host, so as to obtain a comprehensive view on the pathophysiology of CC (<xref ref-type="bibr" rid="B9">Bindels et&#x20;al., 2016</xref>). The portal metabolome reflected significantly decreased glucose and lipoproteins levels, increased creatine and lactate levels. These data demonstrated that gut microbiota can impact intestinal homeostasis, confer benefits to the host, prolong survival and attenuate cachexia.</p>
<p>Increased expressions of inducible nitric oxide synthase (iNOS) have been observed in muscle tissues of cancer, AIDS, chronic heart failure, and COPD cachexia patients, suggesting that iNOS may be involved in the onset of cachexia under various conditions (<xref ref-type="bibr" rid="B1">Adams et&#x20;al., 2003</xref>; <xref ref-type="bibr" rid="B2">Agusti et&#x20;al., 2004</xref>; <xref ref-type="bibr" rid="B75">Ramamoorthy et&#x20;al., 2009</xref>). Sadek and colleagues identified a signature of amino acids that were altered by iNOS activity in muscle by performing LC-MS-based and GC-MS-based metabolomic analyses based on the C26 murine model (<xref ref-type="bibr" rid="B80">Sadek et&#x20;al., 2021</xref>). Notably, iNOS could significantly increase levels of arginine, lysine, tryptophan and methylhistidine, which could be decreased by inhibiting iNOS. Furthermore, they also found iNOS-induced significant decreases in levels of pyruvate, &#x3b1;-ketoglutarate and succinate, which were restored by KO iNOS. These results demonstrated that drug blockade or gene knockout of iNOS could rescue muscle loss and improve metabolic disorders in CC. This study provided the idea on how to use metabolomic techniques to identify potential targeted metabolic pathways. Initially, the researchers clarified metabolic alterations in animal models by conducting metabolomics analysis, thereafter they conducted genetic or pharmacological inhibition of iNOS on certain metabolic pathways including glycolysis, TCA cycle and fatty acid oxidation, which were all related to the energy production. Ultimately, they clearly elucidated the role of the iNOS/NO pathway in promoting energy crisis during cachexia-induced muscle wasting.</p>
<p>In addition, Ballar&#xf2; and colleagues found that abnormal muscle mitochondrial function is correlated with excessive proteolysis, autophagy and mitophagy in the established CC model (<xref ref-type="bibr" rid="B68">Penna et&#x20;al., 2019</xref>). They conducted NMR-based metabolomic analyses of skeletal muscle, liver and plasma. They identified significantly altered energy and protein metabolism such as decreased muscle NADH, increased glutamine, BCAAs and phenylalanine in tumor hosts. Partially, mitochondria-targeted compound SS-31 could modulate both skeletal muscle metabolome and liver metabolome, restore levels of alanine and ATP, as well as liver glycogen and glutathione. This study suggested that targeting mitochondrial function might be an efficient therapeutic approach for CC (<xref ref-type="bibr" rid="B5">Ballaro et&#x20;al., 2021</xref>).</p>
<p>Researches have illustrated that intervening targeted metabolic pathways could attenuate CC symptoms and prevent muscle loss. Yang and colleagues investigated metabolic signatures of CC and the contribution of formoterol to serum metabolites in the C26 mouse model with NMR-based metabolomics approach. They identified several potential biomarkers including amino acids, ketone bodies and citrate cycle metabolites, which well reflected the effects of formoterol treatment (<xref ref-type="bibr" rid="B73">Quanjun et&#x20;al., 2013</xref>). In a later study, this group conducted NMR-based metabolomic analysis based on the C26 mouse model. They exhibited that primary disturbed metabolic pathways in CC were biosynthesis of the BCAAs and glycine, serine, and threonine metabolism. Significantly, treatment with curcumin changed glycolysis with declined levels of lactate, alanine and glucose (<xref ref-type="bibr" rid="B72">Quan-Jun et&#x20;al., 2015</xref>). In addition, Ohbuchi and colleagues exploited molecular mechanisms under the effects of rikkunshito (RKT) acting as a Japanese traditional herbal medicine (Kampo) for the treatment of CC. The researchers performed GC-MS-based plasma metabolomic analysis based on a rat model, and indicated that increased plasma glucarate following the RKT administration could delay body weight loss, reduce muscle wasting and ascites content (<xref ref-type="bibr" rid="B66">Ohbuchi et&#x20;al., 2015</xref>). These studies shed lights on applications of traditional medicines for alleviating the progression of&#x20;CC.</p>
<p>On the other hand, Tseng and colleagues performed in-depth assessments of anti-cachectic activities of a novel histone deacetylase inhibitor AR-42 in C26 and LLC mouse models (<xref ref-type="bibr" rid="B95">Tseng et&#x20;al., 2015</xref>). The LC-MS-based metabolomic analysis displayed that impaired glycolysis, glycogen synthesis and protein turnover in cachectic muscle tissues, could be improved by AR-42 and maintain the homeostatic metabolism relative to controls. Furthermore, Fukawa and colleagues conducted LC-MS-based metabolomic analysis integrated with transcriptomic analysis in muscles in a subcutaneous kidney murine model. They found that tumor-secreted factors induced excessive fatty acid oxidation, leading to muscle tissue dysfunction and activated p38 pathway. Afterwards, they indicated that drug inhibition of fatty acid oxidation could ameliorate human myotubes atrophy <italic>in&#x20;vitro</italic>, and further restore muscle mass and body weight of mice <italic>in vivo</italic> (<xref ref-type="bibr" rid="B33">Fukawa et&#x20;al., 2016</xref>). This work provided the inspiration on how to use non-targeted metabolomic techniques to explore new therapeutic targets. Initially, the researchers elucidated metabolic alterations mainly related to excessive fatty acid oxidation in animal models by performing metabolomics analysis. Then, they conducted pharmacological inhibition of fatty acid oxidation based on <italic>in vivo</italic> and <italic>in&#x20;vitro</italic> models. Ultimately, they successfully rescued body weight loss and muscle atrophy in CC&#x20;mice.</p>
<p>Recently, our group performed integrative NMR-based metabolomic and transcriptomic analyses of gastrocnemius in two murine models of CC (CT26 and LLC), and evaluated the beneficial effects of amiloride for CC treatments (<xref ref-type="bibr" rid="B112">Zhou et&#x20;al., 2021</xref>). We identified significantly impaired metabolic pathways including enhanced muscular proteolysis, suppressed glycolysis and ketone body oxidation in cachectic gastrocnemius. Our results indicated that amiloride can alleviate muscle loss and the progression of CC through blocking exosome release originated from cancer cells. Our study suggests that tumor-released exosome can be a potential target to attenuate muscle wasting during the progression of CC in the future.</p>
<p>In addition to the drug prevention, nutritional supplementation of metabolites such as BCAAs has been applied to improve impaired skeletal muscle metabolisms in diseases like AIDS and diabetes (<xref ref-type="bibr" rid="B102">Viana and Gomes-Marcondes, 2013</xref>). Furthermore, previous studies have demonstrated that leucine supplementation can promote nitrogen balance and restore muscle mass (<xref ref-type="bibr" rid="B100">Ventrucci et&#x20;al., 2004</xref>; <xref ref-type="bibr" rid="B81">Salomao and Gomes-Marcondes, 2012</xref>). This team assessed if a leucine-rich diet could affect metabolic profiles of sera and tumor tissues in a rat model. The results exhibited down-regulated levels of tryptophan and lactate associated with a suppressed hypermetabolic state, and up-regulated levels of &#x3b2;-hydroxybutyrate and acetoacetate, which might indirectly contribute to the prevention of CC (<xref ref-type="bibr" rid="B101">Viana et&#x20;al., 2016</xref>). Recently, this group conducted metabolomic analyses of sera and gastrocnemius derived from rats with leucine supplementation. The tumor-bearing rats displayed distinctly altered metabolic pathways including protein biosynthesis, glycine, serine and threonine metabolism, and ammonia recycling. Significantly, the leucine-rich diet rats showed attenuated Warburg effect and improved lipid metabolism (<xref ref-type="bibr" rid="B55">Miyaguti et&#x20;al., 2020</xref>).</p>
<p>Ketone body supplementation might also contribute to regulation of glucose and lipid metabolism and prevent body weight loss (<xref ref-type="bibr" rid="B41">Kennedy et&#x20;al., 2007</xref>). Shukla and colleagues addressed anti-cancerous and anti-cachectic properties of a ketogenic diet <italic>in&#x20;vitro</italic>, and assessed the effects of ketone bodies on tumor mass and CC symptoms of mice by conducting NMR-based metabolomic analysis <italic>in vivo</italic> (<xref ref-type="bibr" rid="B89">Shukla et&#x20;al., 2014</xref>). They observed reduced glycolytic flux and diminished glutamine uptake, decreased overall ATP content in tumor cells. These results suggest that treatment with ketone bodies could prevent cachexia phenotype. Collectively, we anticipate that exploitation of the global metabolome with metabolomics techniques can achieve more comprehensive knowledge of CC and discover effective therapeutic strategies.</p>
</sec>
</sec>
<sec sec-type="conclusion" id="s4">
<title>Conclusion</title>
<p>Even though metabolomics is relatively less used compared with other omics approaches, it is able to provide key information for further exploration of CC, including mechanistic understanding, potential biomarkers, metabolic signatures, and therapeutic strategies. With the rapid development and wide application of metabolomics analysis in the field of CC research, in-depth understandings of CC have been broadly expanded and systemized. Researchers propose novel hypotheses and develop approaches using metabolomic techniques, to exploit the features of CC and therapeutic targets for the treatments of CC. Metabolomics can be employed to identify potential biomarkers for screening early symptoms and monitoring the progression of CC, through measuring alterations in concentrations of hundreds of endogenous metabolites in bio-fluids and tissues derived from animal and human beings. In addition, numerous studies have shown that targeting specific metabolic pathways could regulate abnormal metabolisms induced by CC and ultimately alleviate syndromes of CC. <xref ref-type="table" rid="T2">Table&#x20;2</xref> displays the summary of the metabolomics studies on CC in the past decade with novel discoveries.</p>
<table-wrap id="T2" position="float">
<label>TABLE 2</label>
<caption>
<p>Overview of metabolic characteristics of CC.</p>
</caption>
<table>
<thead valign="top">
<tr>
<th align="left">References</th>
<th align="center">Study object</th>
<th align="center">Sample information</th>
<th align="center">Analytical technology</th>
<th align="center">Metabolic characteristics</th>
</tr>
</thead>
<tbody valign="top">
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B65">O&#x27;Connell et&#x20;al. (2008)</xref>
</td>
<td rowspan="2" align="left">Mice</td>
<td rowspan="2" align="left">Serum</td>
<td rowspan="2" align="left">NMR</td>
<td align="left">UP: VLDL/LDL;</td>
</tr>
<tr>
<td align="left">DOWN: glucose.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B25">Eisner et&#x20;al. (2011)</xref>
</td>
<td rowspan="2" align="left">Patients</td>
<td rowspan="2" align="left">Urine</td>
<td rowspan="2" align="left">NMR</td>
<td align="left">UP: creatine, creatinine,</td>
</tr>
<tr>
<td align="left">3-OH-isovalerate.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B91">Stretch et&#x20;al. (2012)</xref>
</td>
<td rowspan="2" align="left">Patients</td>
<td align="left">Urine,</td>
<td align="left">NMR,</td>
<td rowspan="2" align="left">Glycerophospholipids and metabolites associated with amino acid metabolism.</td>
</tr>
<tr>
<td align="left">Plasma</td>
<td align="left">MS</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B73">Quanjun et&#x20;al. (2013)</xref>
</td>
<td align="left">Mice</td>
<td align="left">Serum</td>
<td align="left">NMR</td>
<td align="left">Enhanced citrate cycle and amino acid metabolism.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B21">Der-Torossian et&#x20;al. (2013a)</xref>
</td>
<td rowspan="2" align="left">Mice</td>
<td rowspan="2" align="left">Serum</td>
<td rowspan="2" align="left">NMR</td>
<td align="left">Hyperlipidemia, hyperglycemia;</td>
</tr>
<tr>
<td align="left">DOWN: BCAAs.</td>
</tr>
<tr>
<td rowspan="3" align="left">
<xref ref-type="bibr" rid="B22">Der-Torossian et&#x20;al. (2013b)</xref>
</td>
<td rowspan="3" align="left">Mice</td>
<td rowspan="3" align="left">Muscle</td>
<td rowspan="3" align="left">LC-MS</td>
<td align="left">Enhanced Warburg effect;</td>
</tr>
<tr>
<td align="left">Disrupted TCA cycle, promoted oxidative stress,</td>
</tr>
<tr>
<td align="left">impaired redox homeostasis.</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B32">Fujiwara et&#x20;al. (2014)</xref>
</td>
<td align="left">Patients</td>
<td align="left">Serum</td>
<td align="left">GC-MS</td>
<td align="left">Down: paraxanthine.</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B66">Ohbuchi et&#x20;al. (2015)</xref>
</td>
<td align="left">Rat</td>
<td align="left">Plasma</td>
<td align="left">GC-MS</td>
<td align="left">DOWN: glucarate;</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B74">Yang et&#x20;al. (2015)</xref>
</td>
<td rowspan="2" align="left">Mice</td>
<td rowspan="2" align="left">Serum, Muscle</td>
<td rowspan="2" align="left">NMR</td>
<td align="left">UP: neutral amino acids, creatine, ketone bodies, 3-methylhistidine;</td>
</tr>
<tr>
<td align="left">DOWN: BCAAs, glucose.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B72">Quan-Jun et&#x20;al. (2015)</xref>
</td>
<td rowspan="2" align="left">Mice</td>
<td rowspan="2" align="left">Serum</td>
<td rowspan="2" align="left">NMR</td>
<td align="left">UP: phenylalanine;</td>
</tr>
<tr>
<td align="left">DOWN: BCAA, acetoacetate.</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B95">Tseng et&#x20;al. (2015)</xref>
</td>
<td align="left">Mice</td>
<td align="left">Muscle</td>
<td align="left">LC-MS</td>
<td align="left">Impaired glycolysis, glycogen synthesis; protein degradation.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B101">Viana et&#x20;al. (2016)</xref>
</td>
<td rowspan="2" align="left">Rat</td>
<td align="left">Serum,</td>
<td rowspan="2" align="left">NMR</td>
<td rowspan="2" align="left">UP: tryptophan, lactate, ketone bodies.</td>
</tr>
<tr>
<td align="left">Tumor</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B9">Bindels et&#x20;al. (2016)</xref>
</td>
<td rowspan="2" align="left">Mice</td>
<td rowspan="2" align="left">Portal plasma</td>
<td rowspan="2" align="left">NMR</td>
<td align="left">UP: creatine, lactate;</td>
</tr>
<tr>
<td align="left">DOWN: glucose, lipoproteins.</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B33">Fukawa et&#x20;al. (2016)</xref>
</td>
<td align="left">Mice</td>
<td align="left">Muscle, cell</td>
<td align="left">LC-MS</td>
<td align="left">Excessive fatty acid oxidation, enhanced oxidative stress.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B109">Yang et&#x20;al. (2018)</xref>
</td>
<td rowspan="2" align="left">Patients</td>
<td rowspan="2" align="left">Serum, urine</td>
<td rowspan="2" align="left">NMR</td>
<td align="left">UP: Carnosine, phenylacetate;</td>
</tr>
<tr>
<td align="left">Down: leucine.</td>
</tr>
<tr>
<td rowspan="3" align="left">
<xref ref-type="bibr" rid="B16">Cala et&#x20;al. (2018)</xref>
</td>
<td rowspan="3" align="left">Patients</td>
<td rowspan="3" align="left">Plasma</td>
<td align="left">LC-MS,</td>
<td align="left">UP: cortisol;</td>
</tr>
<tr>
<td align="left">GC-MS,</td>
<td align="left">DOWN: Glycerophospholipids,</td>
</tr>
<tr>
<td align="left">CE-MS</td>
<td align="left">Sphingolipids.</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B45">Lautaoja et&#x20;al. (2019)</xref>
</td>
<td align="left">Mice</td>
<td align="left">Serum, Muscle</td>
<td align="left">GC-MS</td>
<td align="left">UP: phenylalanine.</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B12">Boguszewicz et&#x20;al. (2019)</xref>
</td>
<td align="left">Patients</td>
<td align="left">Serum</td>
<td align="left">NMR</td>
<td align="left">UP: 3-hydroxybutyrate.</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B53">Miller et&#x20;al. (2019)</xref>
</td>
<td align="left">Patients</td>
<td align="left">Plasma</td>
<td align="left">LC-MS</td>
<td align="left">UP: lysoPC 18.2, L-proline, hexadecanoic acid, octadecanoic acid, phenylalanine and lysoPC 16:1.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B70">Pin et&#x20;al. (2019)</xref>
</td>
<td rowspan="2" align="left">Mice</td>
<td rowspan="2" align="left">Plasma, Muscle, Liver</td>
<td rowspan="2" align="left">NMR, MS</td>
<td align="left">UP: low-density lipoprotein particles;</td>
</tr>
<tr>
<td align="left">DOWN: circulating glucose, liver glucose and glycogen.</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B98">Uzu et&#x20;al. (2019)</xref>
</td>
<td align="left">Mice</td>
<td align="left">Brain</td>
<td align="left">CE-MS</td>
<td align="left">Activated purine metabolism, Enhanced xanthine oxidase activity.</td>
</tr>
<tr>
<td rowspan="6" align="left">
<xref ref-type="bibr" rid="B18">Cui et&#x20;al. (2019a)</xref>
</td>
<td rowspan="6" align="left">Mice</td>
<td align="left">Tumor,</td>
<td rowspan="6" align="left">NMR</td>
<td align="left">UP (tumor): pyruvate and lactate;</td>
</tr>
<tr>
<td align="left"/>
<td align="left">DOWN (tumor): hypoxanthine, inosine, inosinate;</td>
</tr>
<tr>
<td align="left">Serum,</td>
<td align="left">UP (serum): lactate and glycerol;</td>
</tr>
<tr>
<td align="left"/>
<td align="left">DOWN (serum): glucose;</td>
</tr>
<tr>
<td align="left">Muscle</td>
<td align="left">UP (muscle): &#x3b1;-ketoglutarate;</td>
</tr>
<tr>
<td align="left"/>
<td align="left">DOWN (muscle): glucose.</td>
</tr>
<tr>
<td rowspan="3" align="left">
<xref ref-type="bibr" rid="B19">Cui et&#x20;al. (2019b)</xref>
</td>
<td rowspan="3" align="left">Mice</td>
<td rowspan="3" align="left">Muscle</td>
<td rowspan="3" align="left">NMR</td>
<td align="left">UP: glutamate, arginine, BCAAs;</td>
</tr>
<tr>
<td align="left">DOWN: glucose, glycerol,</td>
</tr>
<tr>
<td align="left">3-hydroxybutyrate.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B43">Kunz et&#x20;al. (2020)</xref>
</td>
<td rowspan="2" align="left">Mice</td>
<td align="left">Plasma,</td>
<td rowspan="2" align="left">LC-MS</td>
<td rowspan="2" align="left">UP: asymmetric dimethylarginine; and NG-monomethyl-L-arginine.</td>
</tr>
<tr>
<td align="left">Muscle</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B103">Viana et&#x20;al. (2020)</xref>
</td>
<td align="left">Rat</td>
<td align="left">Serum</td>
<td align="left">NMR</td>
<td align="left">Promoted amino acid biosynthesis and metabolism.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B55">Miyaguti et&#x20;al. (2020)</xref>
</td>
<td rowspan="2" align="left">Rat</td>
<td align="left">Serum,</td>
<td rowspan="2" align="left">NMR</td>
<td rowspan="2" align="left">UP: tryptophan, phenylalanine, histidine, glutamine.</td>
</tr>
<tr>
<td align="left">Muscle</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B17">Chiocchetti et&#x20;al. (2021)</xref>
</td>
<td align="left">Rat</td>
<td align="left">Muscle</td>
<td align="left">NMR</td>
<td align="left">Increased amino acid levels and disordered energetic metabolism.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B71">Potgens et&#x20;al. (2021)</xref>
</td>
<td rowspan="2" align="left">Mice</td>
<td align="left">Caecal, portal vein, liver,</td>
<td rowspan="2" align="left">NMR</td>
<td rowspan="2" align="left">Suppressed glycolysis and gluconeogenesis, hepatic carnitine and phosphatidylcholine pathway activity; activated hexosamine pathway.</td>
</tr>
<tr>
<td align="left">vena cava</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B62">Ni et&#x20;al. (2021)</xref>
</td>
<td align="left">Patients</td>
<td align="left">Plasma, Gut</td>
<td align="left">LC-MS</td>
<td align="left">DOWN: methylhistamine, BCAAs, vitamins.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B5">Ballaro et&#x20;al. (2021)</xref>
</td>
<td rowspan="2" align="left">Mice</td>
<td rowspan="2" align="left">Muscle, Liver, Plasma</td>
<td rowspan="2" align="left">NMR</td>
<td align="left">UP: glutamine, isoleucine, leucine, valine and phenylalanine;</td>
</tr>
<tr>
<td align="left">DOWN: NADH and succinate.</td>
</tr>
<tr>
<td rowspan="2" align="left">
<xref ref-type="bibr" rid="B80">Sadek et&#x20;al. (2021)</xref>
</td>
<td rowspan="2" align="left">Mice</td>
<td rowspan="2" align="left">Muscle</td>
<td align="left">LC-MS</td>
<td align="left">UP: arginine, lysine, tryptophan, and methylhistidine;</td>
</tr>
<tr>
<td align="left">GC-MS</td>
<td align="left">DOWN: pyruvate, &#x3b1;-ketoglutarate and succinate.</td>
</tr>
<tr>
<td align="left">
<xref ref-type="bibr" rid="B112">Zhou et&#x20;al. (2021)</xref>
</td>
<td align="left">Mice</td>
<td align="left">Muscle</td>
<td align="left">NMR</td>
<td align="left">Enhanced muscular proteolysis, suppressed glycolysis and ketone body oxidation.</td>
</tr>
</tbody>
</table>
</table-wrap>
<p>Current studies indicate that the metabolites of carbohydrates, lipids and amino acids are closely linked to the development and progression of CC (<xref ref-type="fig" rid="F2">Figure&#x20;2</xref>). Carbohydrates related to CC primarily include glucose and lactate, TCA cycle metabolites such as citrate, succinate, and &#x3b1;-ketoglutarate. Lipids relevant to CC mainly include glycerophospholipids, LDL and lipid derivatives. Amino acids participating in the pathogenesis of CC mostly include BCAAs, phenylalanine and their metabolites. In addition, three kinds of ketone bodies and methylhistidine and its metabolites are also important substances involved in the pathological mechanisms of&#x20;CC.</p>
<p>Significantly impaired metabolic pathways are associated with the pathogenesis of CC, including two main types: energy metabolism and amino acid metabolism (<xref ref-type="fig" rid="F2">Figure&#x20;2</xref>). The metabolism of amino acids is usually disordered in CC mainly due to muscle turnover imbalance, such as BCAAs metabolism, arginine metabolism, glutamate and glutamine metabolism, phenylalanine and tyrosine metabolism. Glycolysis, fatty acid oxidation, and TCA cycle are mostly disturbed because of the shifted energy needs. Additionally, impaired metabolisms of carbohydrates and lipids contribute to the progression of CC via a series of metabolic pathways.</p>
</sec>
<sec id="s5">
<title>Future Perspectives</title>
<p>Although the metabolic signatures of cachectic muscle are being investigated in the past decade, we still need to know how to elucidate the molecular mechanisms based on the results obtained from metabolomic analyses. The chemical complexity and large number of metabolites might be one of the challenges associated with metabolomic analyses. For example, metabolite compositions of sera, plasma and urine are manifestations of tumor, liver, muscle, and functions of gut microbes, type of diets, clinical cancer treatment, and other tumor-derived factors like exosomes and cytokines. Compared with other omics approaches, metabolomics has many advantages and also some drawbacks. No techniques are really flawless as a fact. Expectedly, metabolomic analyses should be integrated with other omics approaches, bioinformatics, biophysical techniques and signaling pathway analysis, which would provide comprehensive views on the complicated pathogenesis of CC, and expand our knowledge of fundamental mechanisms underlying metabolic disorder and muscle wasting. As unified workflows, inexpensive equipment, and humanized acquisition software and high throughput measurements as well as powerful computational analysis become more broadly available, metabolomics will play increasingly vital roles in the studies of molecular biosciences.</p>
</sec>
</body>
<back>
<sec id="s6">
<title>Author Contributions</title>
<p>The conception and design were performed by PC, CH, and DL. The manuscript was drafted by PC. The manuscript was discussed and revised by PC, XL, QL, CH, and DL. All authors read and approved the final manuscript.</p>
</sec>
<sec id="s7">
<title>Funding</title>
<p>This work was supported by the National Natural Science Foundation of China (No. 31971357) and the Open Research Fund of State Key Laboratory of Cellular Stress Biology, Xiamen University (SKLCSB2020KF002).</p>
</sec>
<sec sec-type="COI-statement" id="s8">
<title>Conflict of Interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec sec-type="disclaimer" id="s9">
<title>Publisher&#x2019;s Note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors, and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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