AUTHOR=Liu Pei-Gang , Xu Zi-Long , Zhu Yan , Lin Tian-Bao , Lv Zhi-Qiang , Yang Sheng , Wang Jin-Wang , Hu Wen-Jun , Chen Lin , Wei Jia TITLE=Integrative Analyses of Transcriptomics and Metabolomics in Sex Differentiation of Mulberry Flowers JOURNAL=Frontiers in Molecular Biosciences VOLUME=Volume 9 - 2022 YEAR=2022 URL=https://www.frontiersin.org/journals/molecular-biosciences/articles/10.3389/fmolb.2022.881090 DOI=10.3389/fmolb.2022.881090 ISSN=2296-889X ABSTRACT=Sex determination and sex differentiation of plants are important physiological processes of plant development. Mulberry (Morus indica L.) is an important economic tree being cultivated in sericultural countries, and mulberry leaf is commonly used for sericulture. The transcriptomic and metabolomic differences between staminate flowers (SFs) and pistillate flowers (PFs) of mulberry were investigated by using RNA sequencing and ultra-performance liquid chromatography tandem mass spectrometry (UPLC-MS/MS). Overall, we uncovered 4230 genes and 209 metabolites are significantly differentially expressed between the SFs and PFs of mulberry. The combined transcriptomic and metabolomic analysis revealed these differentially expressed genes (DEGs) and differentially expressed metabolites (DEMs) are involved in flavonoid biosynthesis, galactose metabolism, plant-pathogen interaction, and starch and sucrose metabolism, and these detected DEGs and DEMs may be associated with sex differentiation of mulberry. This study will provide a rich source for analysis of the molecular mechanism of mulberry sex differentiation processes.