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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Oncol.</journal-id>
<journal-title>Frontiers in Oncology</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Oncol.</abbrev-journal-title>
<issn pub-type="epub">2234-943X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fonc.2022.948513</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Oncology</subject>
<subj-group>
<subject>Review</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Targeted and cellular therapies in lymphoma: Mechanisms of escape and innovative strategies</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Deshpande</surname>
<given-names>Anagha</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/1825123"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Munoz</surname>
<given-names>Javier</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Mayo Clinic Alix School of Medicine</institution>, <addr-line>Scottsdale, AZ</addr-line>, <country>United States</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>Division of Hematology and Oncology, Mayo Clinic</institution>, <addr-line>Phoenix, AZ</addr-line>, <country>United States</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited by: Bartosz Pu&#x142;a, Institute of Hematology and Transfusiology (IHT), Poland</p>
</fn>
<fn fn-type="edited-by">
<p>Reviewed by: Steven Park, Wake Forest University, United States; Narendranath Epperla, The Ohio State University, United States</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Anagha Deshpande, <email xlink:href="mailto:Deshpande.anagha@mayo.edu">Deshpande.anagha@mayo.edu</email>
</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Pharmacology of Anti-Cancer Drugs, a section of the journal Frontiers in Oncology</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>12</day>
<month>09</month>
<year>2022</year>
</pub-date>
<pub-date pub-type="collection">
<year>2022</year>
</pub-date>
<volume>12</volume>
<elocation-id>948513</elocation-id>
<history>
<date date-type="received">
<day>19</day>
<month>05</month>
<year>2022</year>
</date>
<date date-type="accepted">
<day>08</day>
<month>08</month>
<year>2022</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2022 Deshpande and Munoz</copyright-statement>
<copyright-year>2022</copyright-year>
<copyright-holder>Deshpande and Munoz</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<abstract>
<p>The therapeutic landscape for lymphomas is quite diverse and includes active surveillance, chemotherapy, immunotherapy, radiation therapy, and even stem cell transplant. Advances in the field have led to the development of targeted therapies, agents that specifically act against a specific component within the critical molecular pathway involved in tumorigenesis. There are currently numerous targeted therapies that are currently Food and Drug Administration (FDA) approved to treat certain lymphoproliferative disorders. Of many, some of the targeted agents include rituximab, brentuximab vedotin, polatuzumab vedotin, nivolumab, pembrolizumab, mogamulizumab, vemurafenib, crizotinib, ibrutinib, cerdulatinib, idelalisib, copanlisib, venetoclax, tazemetostat, and chimeric antigen receptor (CAR) T-cells. Although these agents have shown strong efficacy in treating lymphoproliferative disorders, the complex biology of the tumors have allowed for the malignant cells to develop various mechanisms of resistance to the targeted therapies. Some of the mechanisms of resistance include downregulation of the target, antigen escape, increased PD-L1 expression and T-cell exhaustion, mutations altering the signaling pathway, and agent binding site mutations. In this manuscript, we discuss and highlight the mechanism of action of the above listed agents as well as the different mechanisms of resistance to these agents as seen in lymphoproliferative disorders.</p>
</abstract>
<kwd-group>
<kwd>lymphoma</kwd>
<kwd>targeted therapy</kwd>
<kwd>resistance</kwd>
<kwd>mechanism of action</kwd>
<kwd>CAR T-cells</kwd>
<kwd>tazemetostat</kwd>
<kwd>cerdulatinib</kwd>
</kwd-group>
<counts>
<fig-count count="1"/>
<table-count count="4"/>
<equation-count count="0"/>
<ref-count count="153"/>
<page-count count="16"/>
<word-count count="6685"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>Lymphomas are a group of malignancies characterized by the uncontrolled proliferation of either mature B-lymphocytes or T-lymphocytes. Lymphomas can be further classified as Hodgkin or non-Hodgkin based on the presence or absence of Reed-Sternberg cells, respectively. The treatment for lymphomas includes active surveillance, chemotherapy, immunotherapy, radiation therapy, and even stem cell transplant. In terms of chemotherapy, for Hodgkin lymphoma (HL), the front-line therapy has been ABVD (doxorubicin, bleomycin, vinblastine, dacarbazine), but despite great overall survival rates, around 30-40% of patients relapse within the first two years after treatment (<xref ref-type="bibr" rid="B1">1</xref>). On the other hand, for non-Hodgkin lymphoma (NHL), R-CHOP (rituximab, cyclophosphamide, doxorubicin, vincristine, and prednisone) has been the front-line therapy, and despite complete responses, around 40-50% of patients develop refractory/relapsed (R/R) disease (<xref ref-type="bibr" rid="B2">2</xref>). It should be noted that it took decades of trial and error of trying to improve upon the backbone of ABVD and CHOP to eventually develop the brentuximab vedotin + AVD (<xref ref-type="bibr" rid="B3">3</xref>) and rituximab + CHOP treatment regimens that are now part of the first-line therapies. One such example of the trial-and-error process is that after a pivotal trial found unacceptable levels of pulmonary toxicity with brentuximab vedotin + ABVD, bleomycin was removed from the regimen (<xref ref-type="bibr" rid="B4">4</xref>). In addition, after many trials, polatuzumab vedotin was also found to significantly improve the R-CHP treatment regimen in the first-line treatment setting for NHLs (<xref ref-type="bibr" rid="B5">5</xref>, <xref ref-type="bibr" rid="B6">6</xref>). To address high R/R rates, technological advances have led to the development of targeted therapies against driver molecular aberrations that have emerged as highly effective treatment options in patients whose malignancies harbor the allotted target (<xref ref-type="bibr" rid="B7">7</xref>&#x2013;<xref ref-type="bibr" rid="B9">9</xref>). A targeted therapy can be defined as an agent that targets a critical molecular pathway involved in tumorigenesis (<xref ref-type="bibr" rid="B10">10</xref>). Furthermore, advances facilitating rapid genomic profiling have allowed for the formation of hypotheses regarding which patients may benefit more from a targeted therapy based on their genetic subtype (<xref ref-type="bibr" rid="B11">11</xref>). However, many cancers have strategically developed means to outsmart the highly precise medicines to confer resistance. Thus, we will discuss the mechanisms of escape to various targeted therapies noted in lymphoproliferative disorders.</p>
</sec>
<sec id="s2">
<title>Targeted therapies</title>
<sec id="s2_1">
<title>Rituximab</title>
<p>A chimeric monoclonal antibody, rituximab targets the CD20 antigen expressed on lymphocytes and induces cell lysis upon binding antibody-dependent cellular cytotoxicity (ADCC) and complement-dependent cytotoxicity (CDC). Rituximab is used in a variety of disorders, and when it comes to malignancies, it is mainly used to treat NHLs and chronic lymphocytic leukemia. Currently, the FDA has approved rituximab for use in treating NHLs, chronic lymphocytic leukemia (CLL), rheumatoid arthritis, granulomatosis with polyangiitis, and microscopic polyangiitis. Mechanisms of resistance to rituximab are not completely understood, since the therapy relies on the host immune system to mount an immune response, and thus, host factors can also significantly impact efficacy (<xref ref-type="bibr" rid="B12">12</xref>). However, three main mechanisms are postulated. The first is that tumor cells have developed ways to block CDC; analysis of rituximab-resistant cell lines has shown that these cells express high levels of membrane complement regulatory proteins (mCRP) &#x2013; such as CD46, CD55, and CD59 &#x2013; and these inhibitory proteins block the activation of the complement cascade (<xref ref-type="bibr" rid="B13">13</xref>). This theory has been supported by preclinical studies displaying that neutralizing mCRPs with antibodies lead to increased effectiveness of rituximab (<xref ref-type="bibr" rid="B14">14</xref>). Next, though rituximab inhibits B-cell lymphoma 2 (Bcl-2) expression to promote cell apoptosis, a study found that prolonged exposure to rituximab led to the downregulation of pro-apoptotic proteins Bcl-2 antagonist/killer (BAK) and Bcl-2 associated X (BAX), conferring resistance (<xref ref-type="bibr" rid="B15">15</xref>). Finally, the most supported mechanism of resistance is downregulation of CD20, the target antigen. Studies have identified C-terminal deletions in the CD20 gene as well as decreased expression of CD20 mRNA in cells found to be CD20 negative after rituximab exposure (<xref ref-type="bibr" rid="B16">16</xref>, <xref ref-type="bibr" rid="B17">17</xref>). Since rituximab is utilized throughout many phases of lymphoma treatment &#x2013; first-line, maintenance, and salvage &#x2013; studies are being conducted to develop strategies for navigating these mechanisms of resistance.</p>
</sec>
<sec id="s2_2">
<title>Brentuximab vedotin</title>
<p>A chimeric antibody-drug conjugate, brentuximab vedotin targets the CD30 antigen expressed on lymphocytes to trigger cell death. It has been FDA-approved to treat classical HL and systemic anaplastic large cell lymphoma. Additionally, brentuximab vedotin is a part of the front-line therapy for HL and T-cell NHL (<xref ref-type="bibr" rid="B18">18</xref>, <xref ref-type="bibr" rid="B19">19</xref>). CD30 is expressed on activated lymphocytes thus it is an attractive target for therapies (<xref ref-type="bibr" rid="B20">20</xref>). Upon binding, the drug is internalized into the cell and subsequently releases the potent microtubule inhibitor monomethyl auristatin E (MMAE) to inhibit cell differentiation and induce apoptosis (<xref ref-type="bibr" rid="B20">20</xref>). An <italic>in vitro</italic> study analyzing brentuximab vedotin resistant cells found that CD30 expression was not significantly lowered in these cells (<xref ref-type="bibr" rid="B21">21</xref>). Instead, the resistant cells upregulated the expression of the multi-drug resistance (MDR1) gene and its subsequent product, P-glycoprotein, to confer resistance (<xref ref-type="bibr" rid="B21">21</xref>). Additionally, the cells displayed decreased intracellular accumulation of MMAE and increased efflux of MMAE, allowing the cells to avoid death (<xref ref-type="bibr" rid="B21">21</xref>). This mechanism of resistance has been further supported by a phase 1 study evaluating the effects of two broad multi-drug resistance modifiers, cyclosporine A and verapamil, on brentuximab vedotin resistance in patients with brentuximab vedotin-resistant HL (<xref ref-type="bibr" rid="B22">22</xref>). This study found that inhibiting <italic>MDR1</italic> restored sensitivity to brentuximab vedotin, increased intracellular MMAE levels, and improved overall brentuximab vedotin activity (<xref ref-type="bibr" rid="B22">22</xref>).</p>
</sec>
<sec id="s2_3">
<title>Polatuzumab vedotin</title>
<p>Polatuzumab vedotin is another antibody-drug conjugate that targets the CD79b antigen expressed on lymphocytes, and it has been FDA-approved for treating R/R diffuse large B-cell lymphoma (DLBCL). When antigens bind to the B-cell receptor (BCR), the ligand-receptor complex gets internalized into the cell so that the antigen can be presented on major histocompatibility complex (MHC) class II molecules on the B-cell surface. This process relies heavily on the proper functioning of CD79, a heterodimer of CD79a and CD79b, and within this, CD79b is the dominant player (<xref ref-type="bibr" rid="B23">23</xref>). Since CD79b is expressed on most cells of B-cell lymphomas and leukemias, it serves as a prime target for therapies such as polatuzumab vedotin (<xref ref-type="bibr" rid="B23">23</xref>). Upon binding to CD79b, polatuzumab vedotin induces cell death in a similar manner to brentuximab vedotin (<xref ref-type="bibr" rid="B23">23</xref>). Though polatuzumab vedotin is currently approved (in combination with bendamustine plus rituximab) for use in the R/R setting for DLBCL (<xref ref-type="bibr" rid="B24">24</xref>), the POLARIX study found that among 879 patients, the risk of disease progression, relapse, or death was lower in the group treated with polatuzumab vedotin + R-CHP when compared to the group treated with standard R-CHOP &#x2013; highlighting that polatuzumab vedotin + R-CHP may soon emerge as a part of first-line therapy for DLBCL (<xref ref-type="bibr" rid="B5">5</xref>). POLARIX was a confirmatory phase 3 trial based on the positive toxicity profile seen regarding the use of Polatuzumab in the phase 1-2b study in patients with previously untreated DLBCL (<xref ref-type="bibr" rid="B25">25</xref>). Utilizing flow cytometry to analyze CD79b cell-surface expression, one study identified that a minimal threshold of 6.82 geometric mean fluorescence intensity units for CD79b expression must be present for anti-CD79b ADCC to be effective (<xref ref-type="bibr" rid="B25">25</xref>). Therefore, the primary mechanism of resistance to polatuzumab vedotin is downregulation of CD79b expression (<xref ref-type="bibr" rid="B25">25</xref>). However, the ROMULUS phase 2 clinical trial identified resistance to MMAE as another mechanism in patients with R/R diffuse large B-cell lymphoma (DLBCL) and follicular lymphoma (FL) (<xref ref-type="bibr" rid="B26">26</xref>). This trial compared polatuzumab vedotin to pinatuzumab vedotin &#x2013; another antibody-drug conjugate targeted at CD22 (<xref ref-type="bibr" rid="B26">26</xref>). In this trial, six patients who had no response originally switched to the other antibody-drug conjugate, and none of these patients responded to the other drug &#x2013; highlighting that their malignancies had developed resistance to MMAE, not the respective CD drug targets (<xref ref-type="bibr" rid="B26">26</xref>). Strategies to overcome resistance to polatuzumab vedotin are being devised and studied (<xref ref-type="bibr" rid="B27">27</xref>), and indeed many combinatorial approaches are under development in clinical trials including PolaR-ICE (rituximab, ifosfamide, carboplatin, and etoposide) (NCT04665765), polatuzumab vedotin + GemOX (gemcitabine and oxaliplatin) (NCT04182204), and polatuzumab vedotin + mosenutuzumab (NCT03671018) (<xref ref-type="bibr" rid="B28">28</xref>).</p>
</sec>
<sec id="s2_4">
<title>Nivolumab</title>
<p>Nivolumab is a monoclonal antibody that binds to and blocks the programmed death receptor-1 (PD-1). It has been FDA-approved to treat classical Hodgkin lymphoma (cHL), melanoma, non-small cell lung cancer, malignant pleural mesothelioma, renal cell carcinoma, squamous cell carcinoma of the head and neck, urothelial carcinoma, colorectal cancer, hepatocellular carcinoma, esophageal cancer, and gastric cancer. Also known as CD279, PD-1 is a checkpoint protein on T-cells and B-cells that binds to programmed death-ligand 1 and 2 (PD-L1 and PD-L2) on other cells of the body to prevent immune cells from attacking other cells in the body (<xref ref-type="bibr" rid="B29">29</xref>). Malignant cells express high levels of PD-L1 to help shield them from an immune system response (<xref ref-type="bibr" rid="B29">29</xref>). Additionally, the genes for PD-L1 and PD-L2 are located on chromosome 9p24.1, and amplification of 9p24.1 was found to be associated with increased expression of PD-L1 in HL (<xref ref-type="bibr" rid="B30">30</xref>). Therefore, blocking the interaction between PD-1 and PD-L1 enhances the immune system&#x2019;s anti-tumor response and delays tumor growth (<xref ref-type="bibr" rid="B29">29</xref>). Mechanisms of resistance to immune checkpoint inhibition involve inadequate T-cell attraction and activation in addition to impaired T-cell effector functions. In cHL, the Hodgkin Reed-Sternberg (HRS) cells produce vascular endothelial growth factor (VEGF) which induces regulatory T-cell proliferation and increases the expression of inhibitory receptors, including PD-1 (<xref ref-type="bibr" rid="B31">31</xref>). This, in turn, leads to T-cell exhaustion (<xref ref-type="bibr" rid="B31">31</xref>). Thus, a tumor microenvironment with a higher proportion of regulatory T-cells and inhibitory receptors can alter the efficiency of PD-1 blockade therapy (<xref ref-type="bibr" rid="B31">31</xref>). Next, tumor cells can have absent or aberrant HLA expression which compromises antigen presentation and affects immune checkpoint inhibition efficacy (<xref ref-type="bibr" rid="B32">32</xref>). In fact, in around 70% of cHL cases, HLA class I surface expression is lost (<xref ref-type="bibr" rid="B32">32</xref>). Tumor cells can resist PD-1 blockade therapy by increasing the production of indoleamine 2,3-dioxygenase (IDO), the initial and rate-limiting enzyme involved in the degradation of tryptophan (<xref ref-type="bibr" rid="B33">33</xref>). Finally, HRS cells have decreased levels of adenosine deaminase, the enzyme involved degrading the purine adenosine (<xref ref-type="bibr" rid="B34">34</xref>). This increases levels of adenosine in cHL cells which activates the alternative degradation pathway involving CD32, CD203a, and CD73 (<xref ref-type="bibr" rid="B35">35</xref>). However, increased CD73 expression has been shown to directly reduce the effectiveness of PD-1 blockade therapy (<xref ref-type="bibr" rid="B36">36</xref>). Thus, increased adenosine levels in cHL cells confers resistance to immune checkpoint inhibitors such as nivolumab. Strategies to overcome resistance to nivolumab are currently being developed and studied (<xref ref-type="bibr" rid="B37">37</xref>), and certainly many combinatorial approaches are under development in clinical trial including nivolumab + AVD (NCT03907488) and brentuximab + nivolumab with or without ipilimumab (NCT01896999) (<xref ref-type="bibr" rid="B38">38</xref>).</p>
</sec>
<sec id="s2_5">
<title>Pembrolizumab</title>
<p>Like nivolumab, pembrolizumab is another monoclonal antibody that binds to and blocks PD-L1 (<xref ref-type="bibr" rid="B39">39</xref>). It has been FDA-approved for cHL, primary mediastinal large B-cell lymphoma, melanoma, non-small cell lung cancer, small cell lung cancer, head and neck squamous cell cancer, urothelial carcinoma, colorectal cancer, gastric cancer, esophageal cancer, cervical cancer, hepatocellular carcinoma, Merkel cell carcinoma, renal cell carcinoma, endometrial carcinoma, cutaneous squamous cell carcinoma, and triple-negative breast cancer. Mechanisms of resistance to pembrolizumab are similar to those outlined for nivolumab. Currently, studies have identified ways to circumvent resistance to immune checkpoint inhibition in solid tumors (<xref ref-type="bibr" rid="B40">40</xref>, <xref ref-type="bibr" rid="B41">41</xref>); however, studies are being conducted to develop strategies to overcome resistance in lymphoproliferative disorders (<xref ref-type="bibr" rid="B42">42</xref>, <xref ref-type="bibr" rid="B43">43</xref>).</p>
</sec>
<sec id="s2_6">
<title>Mogamulizumab</title>
<p>A monoclonal antibody, mogamulizumab targets the C-C chemokine receptor 4 (CCR4) to inhibit this signal transduction pathway. This, subsequently, prevents the chemokine-mediated migration and proliferation of T-cells (<xref ref-type="bibr" rid="B44">44</xref>). Since CCR4 is expressed on almost all T-cells in cutaneous or peripheral T-cell lymphomas or leukemias, mogamulizumab has emerged as an attractive therapeutic option (<xref ref-type="bibr" rid="B44">44</xref>). It is currently FDA-approved for use in treating R/R mycosis fungoides and S&#xe9;zary syndrome. A study on 19 patients with either mycosis fungoides or S&#xe9;zary syndrome found that though all patients had T-cells with CCR4 expression prior to starting treatment, all of them had to discontinue mogamulizumab due to lack or loss of response to therapy (<xref ref-type="bibr" rid="B45">45</xref>). After stopping treatment, in 57% of patients, CCR4 expression was no longer detected by immunohistochemistry (<xref ref-type="bibr" rid="B45">45</xref>). Targeted DNA-sequencing of these samples found that loss of CCR4 expression occurred both with and without genomic alterations in the <italic>CCR4</italic> gene (<xref ref-type="bibr" rid="B45">45</xref>). Additionally, the study identified that none of the patients that experienced a loss of CCR4 expression benefitted from a second course of mogamulizumab (<xref ref-type="bibr" rid="B45">45</xref>). It should also be noted that this study also identified a subset of patients with high CCR4 expression and an undetermined mechanism of resistance to mogamulizumab (<xref ref-type="bibr" rid="B45">45</xref>). Further investigations are currently underway to better understand these mechanisms of resistance and devise strategies to overcome them. Many combinatorial approaches are under development in clinical trials including mogamulizumab plus magrolimab (NCT04541017) and mogamulizumab plus natural killer cells (NCT04848064) (<xref ref-type="bibr" rid="B46">46</xref>).</p>
</sec>
<sec id="s2_7">
<title>Vemurafenib</title>
<p>A small-molecule kinase inhibitor, vemurafenib inhibits the BRAF serine/threonine protein kinase with the V600E or V600K mutation. Cells with this aberrant molecule have unregulated cell growth through the mitogen activated protein kinase (MAPK) pathway (<xref ref-type="bibr" rid="B47">47</xref>, <xref ref-type="bibr" rid="B48">48</xref>). Thus, this targeted therapy has been effectively used for treating melanoma and hairy cell leukemia (HCL). However, it is currently FDA-approved for unresectable or metastatic melanoma with the BRAF V600E mutation as detected by an FDA-approved test. Furthermore, it is also FDA-approved for patients with Erdheim-Chester disease, which is a rare histiocytic disorder (<xref ref-type="bibr" rid="B49">49</xref>, <xref ref-type="bibr" rid="B50">50</xref>), that carry the BRAF V600E mutation (<xref ref-type="bibr" rid="B51">51</xref>). Initial studies on vemurafenib in HCL found a missense mutation in insulin receptor substrate 1 (IRS1) in addition to the BRAF V600E mutation that induced the MAPK pathway through activation of extracellular signal-regulated kinase (ERK) (<xref ref-type="bibr" rid="B52">52</xref>). By allowing BRAF to be bypassed to activate ERK, the <italic>IRS1</italic> mutation conferred resistance to treatment (<xref ref-type="bibr" rid="B52">52</xref>). Additionally, the study identified a mutation in the Kirsten rat sarcoma (<italic>KRAS</italic>) gene, a protein involved in the RAS/MAPK pathway, that also mediated resistance to vemurafenib (<xref ref-type="bibr" rid="B52">52</xref>). Thus, this study outlined both ERK dependent and independent mechanisms of resistance to vemurafenib in HCL (<xref ref-type="bibr" rid="B52">52</xref>). Another study also found <italic>IRS1</italic> and <italic>KRAS</italic> mutations in vemurafenib-resistant HCL cell lines, however, this study also found loss-of-function mutations in the neurofibromatosis 1 and 2 genes (<italic>NF1</italic> and <italic>NF2</italic>) which contributed to the lack of response (<xref ref-type="bibr" rid="B53">53</xref>). To address these mechanisms of resistance, a study was conducted on a 74-year-old patient with vemurafenib-resistant HCL with many resistance-conferring mutations (including <italic>KRAS</italic>) present in the cell lines (<xref ref-type="bibr" rid="B54">54</xref>). MEK is a protein kinase upstream of ERK in the MAPK pathway, and with the addition of the MEK inhibitor cobimetinib to vemurafenib, the patient responded to such combination therapy (<xref ref-type="bibr" rid="B54">54</xref>). The bone marrow showed suppression of ERK activity (<xref ref-type="bibr" rid="B54">54</xref>). At 12 month follow up, the patient showed continued response and remained asymptomatic &#x2013; highlighting MEK inhibition as a potential option for navigating resistance to vemurafenib (<xref ref-type="bibr" rid="B54">54</xref>).</p>
</sec>
<sec id="s2_8">
<title>Crizotinib</title>
<p>A tyrosine kinase receptor inhibitor, crizotinib specifically targets anaplastic lymphoma kinase (ALK), hepatocyte growth factor receptor (HGFR, c-MET), and Recepteur d&#x2019;Origine Nantais (RON). It is currently FDA-approved for treating metastatic non-small cell lung cancer with ALK or ROS-1 positivity per an FDA-approved test, ALK-positive anaplastic large cell lymphoma, and ALK-positive inflammatory myofibroblastic tumors. In non-small cell lung cancer, studies found a chromosomal rearrangement creating a gene fusion product that resulted in a constitutively active ALK protein as the oncologic driver (<xref ref-type="bibr" rid="B55">55</xref>). Other studies on anaplastic large cell lymphoma, the most common T-cell NHL in children, found that tumor progression was primarily driven by a fusion product between <italic>ALK</italic> and mainly nucleophosmin 1 (NPM1) called NPM-ALK (<xref ref-type="bibr" rid="B56">56</xref>). For these reasons, crizotinib has emerged as an effective therapy for these malignancies. In cases where crizotinib resistance developed, studies identified <italic>ALK</italic> mutations conferring resistance; however, studies are being conducted to see if this can be overcome by using newer-generation ALK inhibitors such as alectinib, ceritinib, brigatinib, and lorlatinib (<xref ref-type="bibr" rid="B57">57</xref>). In other cases where crizotinib resistance developed and <italic>ALK</italic> mutations were not identified, a study used genome-wide clustered regularly interspaced short palindromic repeats (CRISPR) analysis to look for overexpressed genes that could be conferring resistance (<xref ref-type="bibr" rid="B58">58</xref>). This study found that in around 30% of crizotinib-resistant cell lines, the <italic>IL10RA</italic> gene for the IL-10 signaling pathway was overexpressed in cells both with and without <italic>ALK</italic> mutations (<xref ref-type="bibr" rid="B58">58</xref>). Through further investigation, this study identified how the IL-10 pathway ultimately activated signal transducer and activator of transcription 3 (STAT3), a molecule that promotes cell survival (<xref ref-type="bibr" rid="B58">58</xref>). Furthermore, STAT3 was found to bind to the promoter for <italic>IL10RA</italic> and upregulate its expression &#x2013; ultimately creating a feedback loop that bypasses NPM-ALK and promotes cell survival through increased STAT3 activity (<xref ref-type="bibr" rid="B58">58</xref>). However, the authors of this study did note that further investigation of this mechanism of resistance is needed (<xref ref-type="bibr" rid="B58">58</xref>). Strategies to overcome resistance have been identified in non-small cell lung cancer, but studies are needed to develop these strategies in lymphoproliferative disorders (<xref ref-type="bibr" rid="B59">59</xref>).</p>
</sec>
<sec id="s2_9">
<title>Ibrutinib</title>
<p>Constitutive B-cell receptor signaling pathway activation has been implicated in numerous B-cell malignancies. One enzyme in this pathway is Bruton tyrosine kinase (BTK), and this enzyme plays a crucial role in modulating cytokine and integrin expression for B-cell trafficking and proliferation (<xref ref-type="bibr" rid="B60">60</xref>). Thus, ibrutinib was developed to specifically inhibit BTK (although other enzymes are indirectly affected too) and provide a therapeutic effect in malignancies such as CLL, mantle cell lymphoma (MCL), DLBCL, and Waldenstr&#xf6;m&#x2019;s macroglobulinemia (WM) (<xref ref-type="bibr" rid="B60">60</xref>). It is currently FDA-approved for use in treating MCL, CLL, small lymphocytic lymphoma (SLL), WM, MZL, and chronic graft versus host disease. For understanding mechanisms of resistance, early studies utilized whole-exome sequencing to compare baseline and relapse genomes of patients with CLL who had been treated with ibrutinib (<xref ref-type="bibr" rid="B61">61</xref>). One study concluded that resistance developed due to the BTK<sup>C481S</sup> mutation in the binding site on BTK for ibrutinib (<xref ref-type="bibr" rid="B61">61</xref>). This study also identified a mutation in the 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma-2 enzyme (PLCG2) &#x2013; an enzyme that is further downstream of BTK in the B-cell signaling pathway; however its implication in resistance development was not entirely clear (<xref ref-type="bibr" rid="B61">61</xref>). Further investigations identified that this mutation did in fact contribute to ibrutinib-resistance in both CLL and WM (<xref ref-type="bibr" rid="B62">62</xref>, <xref ref-type="bibr" rid="B63">63</xref>). It should be noted that within each malignancy, other genetic mutations have been identified conferring resistance to ibrutinib; however, the <italic>BTK</italic> and <italic>PLCG2</italic> mutations are the most common in patients with CLL. <italic>BTK</italic> and <italic>PLCG2</italic> mutations conferring resistance to ibrutinib have also been documented in MZL (<xref ref-type="bibr" rid="B64">64</xref>). In MCL specifically, studies have identified sustained distal B-cell receptor signaling pathway activation through the classical and alternative NFkB pathways as a mechanism underlying primary resistance to ibrutinib (<xref ref-type="bibr" rid="B65">65</xref>). In WM, <italic>BTK</italic> and PLCG2 mutations have been identified as mechanisms of resistance (<xref ref-type="bibr" rid="B66">66</xref>), however, responses to ibrutinib are also highly dependent on whether patients have the CXCR4<sup>WHIM</sup> mutation that confers resistance to ibrutinib (<xref ref-type="bibr" rid="B67">67</xref>, <xref ref-type="bibr" rid="B68">68</xref>). <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref> summarizes the mutated genes that lead to resistance to ibrutinib resistance in lymphoproliferative disorders. In terms of molecular changes that contribute to resistance, studies have found that resistant DLBCL lines overexpress CD79B while resistant MCL lines overexpress MYC (<xref ref-type="bibr" rid="B70">70</xref>, <xref ref-type="bibr" rid="B71">71</xref>). Increased expression of XPO1 and loss of TRAIL-induced apoptosis has been identified as a mechanism of resistance to ibrutinib in CLL (<xref ref-type="bibr" rid="B84">84</xref>, <xref ref-type="bibr" rid="B85">85</xref>), while deletions on chromosomes 6q and 8p have been identified in WM (<xref ref-type="bibr" rid="B86">86</xref>, <xref ref-type="bibr" rid="B87">87</xref>). Hence, not every lymphoproliferative disorder will display the same mechanism of resistance when exposed to BTK inhibitors. Resistance to ibrutinib has been overcome through the development of second-generation BTK inhibitors that target BTK with much more specificity compared to ibrutinib. <xref ref-type="table" rid="T1">
<bold>Table&#xa0;1</bold>
</xref> also summarizes therapeutical strategies to circumvent resistance.</p>
<table-wrap id="T1" position="float">
<label>Table&#xa0;1</label>
<caption>
<p>Summary table of the mechanisms of resistance to targeted therapies in lymphoproliferative disorders.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="center">Agent</th>
<th valign="top" align="center">Target</th>
<th valign="top" align="center">Primary clinical indications</th>
<th valign="top" align="center">FDA-approval</th>
<th valign="top" align="center">Mechanism of resistance</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" rowspan="3" align="center">Rituximab</td>
<td valign="top" rowspan="3" align="center">CD20</td>
<td valign="top" rowspan="3" align="center">NHLs, CLL</td>
<td valign="top" rowspan="3" align="center">NHLs, CLL, rheumatoid arthritis, granulomatosis with polyangiitis, and microscopic polyangiitis</td>
<td valign="top" align="left">Expression of inhibitory proteins that block complement activation (<xref ref-type="bibr" rid="B13">13</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Downregulation of BAK and BAX (<xref ref-type="bibr" rid="B15">15</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Downregulation of CD20 (<xref ref-type="bibr" rid="B16">16</xref>, <xref ref-type="bibr" rid="B17">17</xref>)</td>
</tr>
<tr>
<td valign="top" align="center">Brentuximab vedotin</td>
<td valign="top" align="center">CD30</td>
<td valign="top" align="center">cHL, anaplastic large cell lymphoma</td>
<td valign="top" align="center">cHL and systemic anaplastic large cell lymphoma</td>
<td valign="top" align="left">Increased expression of <italic>MDR1</italic> and P-glycoprotein (<xref ref-type="bibr" rid="B21">21</xref>)</td>
</tr>
<tr>
<td valign="top" rowspan="2" align="center">Polatuzumab vedotin</td>
<td valign="top" rowspan="2" align="center">CD79b</td>
<td valign="top" rowspan="2" align="center">DLBCL</td>
<td valign="top" rowspan="2" align="center">R/R DLBCL</td>
<td valign="top" align="left">Downregulation of CD79b expression (<xref ref-type="bibr" rid="B25">25</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Resistance to MMAE (<xref ref-type="bibr" rid="B26">26</xref>)</td>
</tr>
<tr>
<td valign="top" rowspan="4" align="center">Nivolumab</td>
<td valign="top" rowspan="4" align="center">PD-1</td>
<td valign="top" rowspan="4" align="center">cHL</td>
<td valign="top" rowspan="4" align="center">cHL, melanoma, non-small cell lung cancer, malignant pleural mesothelioma, renal cell carcinoma, squamous cell carcinoma of the head and neck, urothelial carcinoma, colorectal cancer, hepatocellular carcinoma, esophageal cancer, and gastric cancer</td>
<td valign="top" align="left">Altered tumor microenvironment with increased regulatory T-cells and inhibitory receptors (<xref ref-type="bibr" rid="B31">31</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Absent or aberrant HLA expression (<xref ref-type="bibr" rid="B32">32</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Increased IDO production (<xref ref-type="bibr" rid="B33">33</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Increased levels of adenosine that increases CD73 expression (<xref ref-type="bibr" rid="B34">34</xref>, <xref ref-type="bibr" rid="B36">36</xref>)</td>
</tr>
<tr>
<td valign="top" align="center">Pembrolizumab</td>
<td valign="top" align="center">PD-1</td>
<td valign="top" align="center">cHL, B-cell lymphoma</td>
<td valign="top" align="center">cHL, primary mediastinal large B-cell lymphoma, melanoma, non-small cell lung cancer, small cell lung cancer, head and neck squamous cell cancer, urothelial carcinoma, colorectal cancer, gastric cancer, esophageal cancer, cervical cancer, hepatocellular carcinoma, Merkel cell carcinoma, renal cell carcinoma, endometrial carcinoma, cutaneous squamous cell carcinoma, and triple-negative breast cancer</td>
<td valign="top" align="left">Same mechanisms above as nivolumab</td>
</tr>
<tr>
<td valign="top" align="center">Mogamulizumab</td>
<td valign="top" align="center">CCR4</td>
<td valign="top" align="center">Cutaneous T-cell lymphoma</td>
<td valign="top" align="center">R/R mycosis fungoides and S&#xe9;zary syndrome</td>
<td valign="top" align="left">Loss of CCR4 expression (<xref ref-type="bibr" rid="B45">45</xref>)</td>
</tr>
<tr>
<td valign="top" rowspan="3" align="center">Vemurafenib</td>
<td valign="top" rowspan="3" align="center">BRAF</td>
<td valign="top" rowspan="3" align="center">Hairy cell leukemia</td>
<td valign="top" rowspan="3" align="center">Unresectable or metastatic melanoma with the BRAF V600E mutation, Erdheim-Chester disease</td>
<td valign="top" align="left">
<italic>IRS1</italic> mutation (<xref ref-type="bibr" rid="B52">52</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>KRAS</italic> mutation (<xref ref-type="bibr" rid="B52">52</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Loss of function mutations in <italic>NF1</italic> and <italic>NF2 (</italic>
<xref ref-type="bibr" rid="B53">53</xref>)</td>
</tr>
<tr>
<td valign="top" rowspan="3" align="center">Crizotinib</td>
<td valign="top" rowspan="3" align="center">ALK</td>
<td valign="top" rowspan="3" align="center">Anaplastic large cell lymphoma</td>
<td valign="top" rowspan="3" align="center">Metastatic non-small cell lung cancer with ALK or ROS-1 positivity, ALK positive anaplastic large cell lymphoma, ALK positive inflammatory myofibroblastic tumor</td>
<td valign="top" align="left">
<italic>ALK</italic> mutation (<xref ref-type="bibr" rid="B57">57</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Overexpression of <italic>IL10RA</italic> in the IL-10 signaling pathway (<xref ref-type="bibr" rid="B58">58</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Increased STAT3 activity (<xref ref-type="bibr" rid="B58">58</xref>)</td>
</tr>
<tr>
<td valign="top" rowspan="4" align="center">Ibrutinib</td>
<td valign="top" rowspan="4" align="center">BTK</td>
<td valign="top" rowspan="4" align="center">CLL</td>
<td valign="top" rowspan="4" align="center">MCL, CLL, SLL, WM, MZL, and chronic graft versus host disease.</td>
<td valign="top" align="left">BTK<sup>C481S</sup> mutation (<xref ref-type="bibr" rid="B61">61</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">PLCG2 enzyme mutation (<xref ref-type="bibr" rid="B69">69</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Overexpression of CD79B (<xref ref-type="bibr" rid="B70">70</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Overexpression of MYC (<xref ref-type="bibr" rid="B71">71</xref>)</td>
</tr>
<tr>
<td valign="top" rowspan="3" align="center">Cerdulatinib</td>
<td valign="top" rowspan="3" align="center">JAK-STAT</td>
<td valign="top" rowspan="3" align="center">T-cell lymphoma</td>
<td valign="top" rowspan="3" align="center">Orphan drug designation for peripheral T-cell lymphoma</td>
<td valign="top" align="left">Generation of <italic>MYB-TYK2</italic> fusion gene (<xref ref-type="bibr" rid="B72">72</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Hyperactivity of JAK-STAT signaling pathway (<xref ref-type="bibr" rid="B72">72</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>EP300</italic> mutation (<xref ref-type="bibr" rid="B73">73</xref>)</td>
</tr>
<tr>
<td valign="top" rowspan="2" align="center">Idelalisib</td>
<td valign="top" rowspan="2" align="center">PI3K</td>
<td valign="top" rowspan="2" align="center">CLL</td>
<td valign="top" rowspan="2" align="center">Approved January 2014; Withdrawn January 2022</td>
<td valign="top" align="left">Increased IGF1R expression (<xref ref-type="bibr" rid="B74">74</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>KRAS</italic>, <italic>BRAF</italic>, and <italic>MAP2K1</italic> mutations (<xref ref-type="bibr" rid="B75">75</xref>)</td>
</tr>
<tr>
<td valign="top" rowspan="3" align="center">Copanlisib</td>
<td valign="top" rowspan="3" align="center">PI3K</td>
<td valign="top" rowspan="3" align="center">FL</td>
<td valign="top" rowspan="3" align="center">Relapsed FL</td>
<td valign="top" align="left">Upregulation of IL-6 to induce STAT3 and STAT5 pathways (<xref ref-type="bibr" rid="B76">76</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Downregulation of genes involved in cell adhesion, antigen presentation, and interferon response (<xref ref-type="bibr" rid="B77">77</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Upregulation of cytokine, NF-KB, MAPK, and JAK-STAT pathways and negative regulators of apoptosis (<xref ref-type="bibr" rid="B77">77</xref>)</td>
</tr>
<tr>
<td valign="top" rowspan="4" align="center">Venetoclax</td>
<td valign="top" rowspan="4" align="center">Bcl2</td>
<td valign="top" rowspan="4" align="center">CLL, SLL</td>
<td valign="top" rowspan="4" align="center">CLL, SLL, and AML</td>
<td valign="top" align="left">G101V and D103Y mutations in Bcl2 (<xref ref-type="bibr" rid="B78">78</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>BTG1</italic> and <italic>BRAF</italic> mutations (<xref ref-type="bibr" rid="B79">79</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>CDKN2A/B</italic> deletions (<xref ref-type="bibr" rid="B79">79</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Amplification of PD-L1 expression (<xref ref-type="bibr" rid="B79">79</xref>)</td>
</tr>
<tr>
<td valign="top" rowspan="2" align="center">Tazemetostat</td>
<td valign="top" rowspan="2" align="center">EZH2</td>
<td valign="top" rowspan="2" align="center">FL</td>
<td valign="top" rowspan="2" align="center">Epithelioid sarcomas and R/R FL</td>
<td valign="top" align="left">Increased activation of IGF1R and MEK, PI3K pathways (<xref ref-type="bibr" rid="B80">80</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Acquired mutations in <italic>EZH2</italic> altering drug binding (<xref ref-type="bibr" rid="B80">80</xref>)</td>
</tr>
<tr>
<td valign="top" rowspan="4" align="center">CAR T-cells</td>
<td valign="top" rowspan="4" align="center">CD19, CD20</td>
<td valign="top" rowspan="4" align="center">DLBCL, FL, MCL</td>
<td valign="top" rowspan="4" align="center">DLBCL, FL, MCL, B-cell ALL, and multiple myeloma (please refer to <xref ref-type="table" rid="T3">
<bold>Table&#xa0;3</bold>
</xref> for further breakdown)</td>
<td valign="top" align="left">Nonsense mutation mediated CD19 decay (<xref ref-type="bibr" rid="B81">81</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Downregulation of CD20 expression (<xref ref-type="bibr" rid="B69">69</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">B-cell lineage switching from lymphoid to myeloid through <italic>MLL (</italic>
<xref ref-type="bibr" rid="B82">82</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">Increased PD-L1 signaling leading to T-cell exhaustion (<xref ref-type="bibr" rid="B83">83</xref>)</td>
</tr>
</tbody>
</table>
</table-wrap>
</sec>
<sec id="s2_10">
<title>Cerdulatinib</title>
<p>In the pathogenesis of B-cell malignancies, the Janus kinase and Signal Transducer and Activator of Transcription (JAK-STAT) pathway produces an active STAT3 molecule that promotes cell survival even in a hostile tumor microenvironment (<xref ref-type="bibr" rid="B88">88</xref>). Studies showed that inactivating either JAK or STAT3 decreased cell proliferation and increased apoptosis, and this provided the rationale for developing cerdulatinib &#x2013; a small-molecule ATP-competitive inhibitor of SYK, JAK1, JAK2, JAK3, and TYK2 (<xref ref-type="bibr" rid="B88">88</xref>). This therapy has FDA orphan drug designation for treating peripheral T-cell lymphoma. It should be noted that studies have highlighted that cerdulatinib can overcome ibrutinib-resistance in R/R CLL (<xref ref-type="bibr" rid="B89">89</xref>). Preliminary data has also shown the drug&#x2019;s efficacy in treating small lymphoplasmacytic lymphoma (SLL), FL, DLBCL, ALL, and peripheral T-cell lymphoma (PTCL). <italic>In vitro</italic> studies have modeled several mechanisms of resistance to cerdulatinib in ALL (<xref ref-type="bibr" rid="B72">72</xref>). The first was that long-term exposure to the drug facilitated the generation of the <italic>MYB-TYK2</italic> fusion gene that conferred resistance (<xref ref-type="bibr" rid="B72">72</xref>). Next, resistant cells with the <italic>MYB-TYK2</italic> fusion protein displayed hyperactivation of the JAK/STAT signaling pathway, leading to no response to the drug (<xref ref-type="bibr" rid="B72">72</xref>). However, withdrawing the drug for a brief period did re-sensitize the cells to treatment (<xref ref-type="bibr" rid="B72">72</xref>). In a phase 1 trial, eight patients with R/R CLL were given cerdulatinib, and two patients were found to have disease progression with treatment (<xref ref-type="bibr" rid="B73">73</xref>). These patients were found to have mutations in <italic>BTK</italic>, <italic>TP53</italic>, and <italic>EP300</italic>. Furthermore, it was proposed that the mutation in <italic>EP300</italic>, a gene encoding a histone acetyltransferase, was the mostly likely mechanism of resistance of cerdulatinib (<xref ref-type="bibr" rid="B73">73</xref>). Strategies to overcome resistance to cerdulatinib are highly awaited. For example, there was a phase 2 trial combining cerdulatinib with or without rituximab in patients with lymphoma (<xref ref-type="bibr" rid="B73">73</xref>).</p>
</sec>
<sec id="s2_11">
<title>Idelalisib</title>
<p>In many cancers, the phosphoinositide 3-kinase (PI3K) signal transduction pathway is highly active, which is why developing agents targeting PI3K was previously attractive (<xref ref-type="bibr" rid="B90">90</xref>). However, a challenge that arises is that four distinct PI3K isoforms exist with partially overlapping functions and differing toxic effects (<xref ref-type="bibr" rid="B90">90</xref>). One such agent is idelalisib, a selective inhibitor of the delta isoform of PI3K, which has shown strong efficacy in treating B-cell malignancies with an acceptable side-effect profile (<xref ref-type="bibr" rid="B90">90</xref>). This drug was previously FDA-approved for treating CLL, FL, and SLL (<xref ref-type="bibr" rid="B90">90</xref>). However, there was a voluntary withdrawal of the indication for SLL and FL in 2022 (<xref ref-type="bibr" rid="B91">91</xref>). <xref ref-type="table" rid="T2">
<bold>Table&#xa0;2</bold>
</xref> illustrates select PI3K inhibitors, their clinical indications, and FDA-approval status. <italic>In vitro</italic> studies evaluating idelalisib resistance in CLL found that it is associated with increased expression of the insulin-like growth factor 1 receptor (IGF1R) (<xref ref-type="bibr" rid="B74">74</xref>). Furthermore, this study also found that cells became re-sensitized to treatment when an IGF1R inhibitor was utilized (<xref ref-type="bibr" rid="B74">74</xref>). Another study found that CLL cells became resistant to idelalisib with increased and constitutive MAPK pathway activation, and this allowed for communication between the PI3K and MAPK pathways that circumvented PI3K inhibition (<xref ref-type="bibr" rid="B75">75</xref>). This study also identified that increased MAPK pathway activation was associated with the acquisition of mutations in <italic>KRAS, BRAF</italic>, and <italic>MAP2K1 (</italic>
<xref ref-type="bibr" rid="B75">75</xref>).</p>
<table-wrap id="T2" position="float">
<label>Table&#xa0;2</label>
<caption>
<p>Summary of mechanisms of resistance to ibrutinib in lymphoproliferative disorders and strategies to overcome resistance.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" rowspan="2" align="center">Mutated gene/Aberration</th>
<th valign="top" rowspan="2" align="center">Mechanism of resistance</th>
<th valign="top" colspan="5" align="center">Conditions</th>
<th valign="top" rowspan="2" align="center">Possible treatment strategy</th>
<th valign="top" rowspan="2" align="center">References</th>
</tr>
<tr>
<th valign="top" align="center">CLL</th>
<th valign="top" align="center">MCL</th>
<th valign="top" align="center">MZL</th>
<th valign="top" align="center">DLBCL</th>
<th valign="top" align="center">WM</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">
<italic>BTK</italic> (covalent)</td>
<td valign="top" align="left">Reversible ibrutinib binding</td>
<td valign="top" align="center">+</td>
<td valign="top" align="center">+</td>
<td valign="top" align="center">+</td>
<td valign="top" align="center"/>
<td valign="top" align="center">+</td>
<td valign="top" align="left">Third generation BTK inhibitors, PROTAC-BTK, inhibitors of LYN and SYK</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B61">61</xref>&#x2013;<xref ref-type="bibr" rid="B124">124</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>PLCG2</italic>
</td>
<td valign="top" align="left">BTK-independent activation</td>
<td valign="top" align="center">+</td>
<td valign="top" align="center">+</td>
<td valign="top" align="center">+</td>
<td valign="top" align="center"/>
<td valign="top" align="center">+</td>
<td valign="top" align="left">Inhibitors of RAC2, LYN, and SYK</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B61">61</xref>&#x2013;<xref ref-type="bibr" rid="B120">120</xref>, <xref ref-type="bibr" rid="B125">125</xref>, <xref ref-type="bibr" rid="B126">126</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>CARD11</italic>
</td>
<td valign="top" align="left">Increased NFkB signaling</td>
<td valign="top" align="center">+</td>
<td valign="top" align="center">+</td>
<td valign="top" align="center"/>
<td valign="top" align="center">+</td>
<td valign="top" align="center">+</td>
<td valign="top" align="left">Proteasome or MALT1 inhibitor</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B63">63</xref>, <xref ref-type="bibr" rid="B127">127</xref>&#x2013;<xref ref-type="bibr" rid="B129">129</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>BIRC3, TRAF2, TRAF3</italic>
</td>
<td valign="top" align="left">Increased NFkB signaling</td>
<td valign="top" align="center"/>
<td valign="top" align="center">+</td>
<td valign="top" align="center"/>
<td valign="top" align="center"/>
<td valign="top" align="center"/>
<td valign="top" align="left">MP3K14 inhibitor</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B130">130</xref>, <xref ref-type="bibr" rid="B131">131</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>CCND1</italic>
</td>
<td valign="top" align="left">Cell cycle progression</td>
<td valign="top" align="center"/>
<td valign="top" align="center">+</td>
<td valign="top" align="center"/>
<td valign="top" align="center"/>
<td valign="top" align="center"/>
<td valign="top" align="left"/>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B132">132</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>CCDKN2A</italic>
</td>
<td valign="top" align="left">Cell cycle progression</td>
<td valign="top" align="center"/>
<td valign="top" align="center">+</td>
<td valign="top" align="center"/>
<td valign="top" align="center"/>
<td valign="top" align="center"/>
<td valign="top" align="left">PRMT5 inhibitor</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B133">133</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>TNFAIP3</italic>
</td>
<td valign="top" align="left">Increased NFkB signaling</td>
<td valign="top" align="center"/>
<td valign="top" align="center"/>
<td valign="top" align="center"/>
<td valign="top" align="center">+</td>
<td valign="top" align="center"/>
<td valign="top" align="left"/>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B129">129</xref>)</td>
</tr>
<tr>
<td valign="top" align="left">
<italic>KLHL14</italic>
</td>
<td valign="top" align="left">Increased MYD88-TLR9-BCR super-complex signaling</td>
<td valign="top" align="center"/>
<td valign="top" align="center"/>
<td valign="top" align="center"/>
<td valign="top" align="center">+</td>
<td valign="top" align="center"/>
<td valign="top" align="left">Inhibition of BCR-dependent NFkB activation/mTOR inhibitors</td>
<td valign="top" align="left">(<xref ref-type="bibr" rid="B134">134</xref>)</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>+: Some pre-clinical or clinical evidence available that this particular pathway may play a role regarding resistance at the time of publication. Possible treatment strategies to overcome resistance are mainly theoretical based on pre-clinical hypotheses. The intention for this table is to show that the mechanisms of resistance may differ among lymphoproliferative disorders. This table is not meant to be comprehensive as there may be more mechanisms of resistance and more possible treatment strategies to overcome resistance involved in a particular pathway for any of these conditions particularly as our knowledge evolves over time.</p>
</fn>
<fn>
<p>*Non-genetic mechanisms of resistance to ibrutinib in lymphoproliferative disorders include PI3K-Akt pathway activation (which can possibly be overcome by PI3K, mTOR, or XPO1 inhibitors) (<xref ref-type="bibr" rid="B84">84</xref>, <xref ref-type="bibr" rid="B135">135</xref>&#x2013;<xref ref-type="bibr" rid="B143">143</xref>), JAK-STAT pathway activation (which can possibly be overcome by dual SYK/JAK-STAT inhibitors) (<xref ref-type="bibr" rid="B89">89</xref>), MYC activation (which can possibly be overcome by an HSP90 inhibitor) (<xref ref-type="bibr" rid="B71">71</xref>), MAPK pathway activation (which can possibly be overcome by an MEK inhibitor) (<xref ref-type="bibr" rid="B144">144</xref>, <xref ref-type="bibr" rid="B145">145</xref>), BCL2 activation (which can possibly be overcome by an BCL2 inhibitor) (<xref ref-type="bibr" rid="B146">146</xref>&#x2013;<xref ref-type="bibr" rid="B149">149</xref>), metabolic reprogramming (which can possibly be overcome by an oxidative phosphorylation inhibitor) (<xref ref-type="bibr" rid="B133">133</xref>, <xref ref-type="bibr" rid="B150">150</xref>), integrin-mediated protection (which can possibly be overcome by VLA4 inhibition) (<xref ref-type="bibr" rid="B151">151</xref>, <xref ref-type="bibr" rid="B152">152</xref>), and resistant cancer stem cells (which can possibly be overcome by an Wnt pathway inhibitor) (<xref ref-type="bibr" rid="B153">153</xref>).</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
<sec id="s2_12">
<title>Copanlisib</title>
<p>Similar to idelalisib, copanlisib is a highly selective and potent intravenous PI3K inhibitor, yet it is unique because it can target multiple isoforms of PI3K, making it a pan-PI3K inhibitor (<xref ref-type="bibr" rid="B92">92</xref>, <xref ref-type="bibr" rid="B93">93</xref>). For example, its unique affinity to the alpha isoform of PI3K (which is present in the pancreas) explains some of its toxicities including hyperglycemia (<xref ref-type="bibr" rid="B94">94</xref>). Furthermore, the intravenous route of administration as well as intermittent dosing schedule of the drug have been suggested to portray a more favorable tolerability profile compared to oral PI3K inhibitors (<xref ref-type="bibr" rid="B95">95</xref>). Nevertheless, the intravenous administration can also be cumbersome for patients that live far from a cancer center. It has been FDA-approved for relapsed FL. For mechanisms of resistance, a study on B-cell lymphoma resistant cells identified upregulation of IL-6, and IL-6 was able to independently activate STAT3 or STAT5 pathways to confer resistance to PI3K inhibition (<xref ref-type="bibr" rid="B76">76</xref>), thus the STAT pathway may be a relevant mechanism of resistance for some lymphoproliferative disorders (<xref ref-type="bibr" rid="B96">96</xref>). In resistant MZL cells, gene expression profiling showed upregulation of cytokine, NF-KB, MAPK, and JAK-STAT signaling pathways as well as the negative regulators of apoptosis (<xref ref-type="bibr" rid="B77">77</xref>), CD44 and JUN, as a mechanism underlying resistance (<xref ref-type="bibr" rid="B77">77</xref>). Furthermore, the cells showed decreased expression of genes involved in cell adhesion (ITGA4, ITGB1), antigen presentation, and interferon response (PARP12, GBP6) (<xref ref-type="bibr" rid="B77">77</xref>). This study also used flow cytometry to identify increased CXCR4 surface expression on resistant cells, and subsequently, the addition of a CXCR4 inhibitor overcame resistance to copanlisib (<xref ref-type="bibr" rid="B77">77</xref>).</p>
</sec>
<sec id="s2_13">
<title>Venetoclax</title>
<p>Venetoclax is an inhibitor of B-cell lymphoma 2 (Bcl2), a pro-survival molecule that regulates the intrinsic apoptosis pathway. This drug is currently FDA-approved to treat CLL, SLL, and acute myeloid leukemia (AML). By binding to Bcl2, venetoclax enables the Bim and BH3 proteins to activate the pro-apoptotic molecules, Bax and Bak. Activation of these molecules commits the cell to apoptosis through the intrinsic mitochondrial pathway and prohibits further cell proliferation. However, malignant cells have developed many mechanisms of resistance to the drug. Some studies have identified mutations in the BH3 binding groove of Bcl2 that led to a protein conformation change hindering the ability of venetoclax to bind to Bcl2 and ultimately conferring resistance (<xref ref-type="bibr" rid="B97">97</xref>). Additionally, G101V and D103Y mutations in Bcl2 were identified which also interfere with the drug binding to Bcl2 (<xref ref-type="bibr" rid="B78">78</xref>). Other studies looking at patients with R/R CLL identified many genetics aberrations in cancer-related genes that conferred resistance to treatment. These included: mutations of <italic>BTG1</italic> and <italic>BRAF</italic>, deletions in <italic>CDKN2A/B</italic>, and amplification of PD-L1 expression &#x2013; suggesting multiple mechanisms of resistance (<xref ref-type="bibr" rid="B79">79</xref>). Combination treatment strategies have been developed to improve the clinical efficacy and studies have shown improved response rates with venetoclax in combination with various agents including cytarabine, ibrutinib, rituximab, or bendamustine (<xref ref-type="bibr" rid="B98">98</xref>). Additional studies are currently being conducted to develop optimal combination regimens (<xref ref-type="bibr" rid="B98">98</xref>).</p>
</sec>
<sec id="s2_14">
<title>Tazemetostat</title>
<p>Enhancer of zeste homolog 2 (EZH2) is a part of the polycomb group gene (PcG) family, and this is a group of epigenetic regulators that represses transcription (<xref ref-type="bibr" rid="B99">99</xref>). Aberrant EZH2 expression and signaling has been implicated in the pathogenesis of various cancers, which led to the development of the EZH2 inhibitor, tazemetostat (<xref ref-type="bibr" rid="B99">99</xref>). This agent is FDA-approved to treat epithelioid sarcomas and R/R FL. Although the agent is FDA approved for FL, we are still trying to elucidate the mechanisms of resistance to tazemetostat in FL (<xref ref-type="bibr" rid="B80">80</xref>, <xref ref-type="bibr" rid="B100">100</xref>). For example, it has been described that resistance to EZH2 inhibitors in DLBCL occurs due to the activation of survival pathways and acquired EZH2 mutations that prevent drug binding (<xref ref-type="bibr" rid="B80">80</xref>). Resistant DLBCL cells have been found to display increased activation of IGF1R as well as the MEK and PI3K pathways, conferring resistance to EZH2 inhibition (<xref ref-type="bibr" rid="B80">80</xref>). Additionally, this study identified acquired mutations in the gene for EZH2 that included EZH2<sup>Y641F</sup>, EZH2<sup>C663Y</sup>, EZH2<sup>E720G</sup>, and EZH2<sup>Y726F</sup> (<xref ref-type="bibr" rid="B80">80</xref>). These mutations prevented drug binding to the EZH2 mutants which decreased the effectiveness of treatment (<xref ref-type="bibr" rid="B80">80</xref>). Strategies to overcome resistance to tazemetostat are highly awaited in lymphoproliferative disorders.</p>
</sec>
<sec id="s2_15">
<title>CAR T-cells</title>
<p>CAR T-cell therapy has emerged as the breakthrough treatment for numerous hematological malignancies. The basic principle behind this autologous therapy is genetically engineering and modifying a person&#x2019;s T-cells to display a tumor antigen-binding receptor that directs the T-cells to mount a response against tumor cells (<xref ref-type="bibr" rid="B101">101</xref>). A CAR construct is a genetically engineered antigen receptor that binds to a target antigen (<xref ref-type="bibr" rid="B101">101</xref>). The CAR construct, of the 3 FDA approved constructs currently in the market for lymphoma, is made to target cluster of differentiation (CD) molecules that are expressed on malignant cells (<xref ref-type="bibr" rid="B101">101</xref>). For example, in numerous B-cell malignancies, CD19 is a primary target since this is highly expressed throughout all stages of B-cell development and differentiation (<xref ref-type="bibr" rid="B101">101</xref>). CAR T-cell therapy has shown great efficacy in treating DLBCL, FL, MCL, B-cell ALL, and multiple myeloma. In fact, studies have corroborated CAR T-cell therapy efficacy and toxicity with standard of care products in real-world investigations (<xref ref-type="bibr" rid="B102">102</xref>). Additionally, CAR T-cells are FDA-approved in multiple lymphoproliferative disorders including DLBCL (<xref ref-type="bibr" rid="B103">103</xref>&#x2013;<xref ref-type="bibr" rid="B105">105</xref>), MCL (<xref ref-type="bibr" rid="B106">106</xref>&#x2013;<xref ref-type="bibr" rid="B108">108</xref>), and FL (<xref ref-type="bibr" rid="B109">109</xref>). <xref ref-type="table" rid="T3">
<bold>Table&#xa0;3</bold>
</xref> summarizes the currently available CAR T-cell therapies and their FDA-approved clinical indications as of July 31, 2022. Seeing as how effective CAR T-cell therapy has been in the R/R setting for lymphoproliferative disorders, studies are currently being conducted to investigate incorporating CAR T-cell therapy in earlier lines of therapy (<xref ref-type="bibr" rid="B110">110</xref>, <xref ref-type="bibr" rid="B111">111</xref>). The main toxicities associated with CAR T-cell therapy are cytokine release syndrome (CRS) and immune effector cell-associated neurotoxicity syndrome (ICANS). Studies have shown that certain therapies utilized prior to CAR T-cell therapy &#x2013; including bridging and prophylaxis &#x2013; may influence toxicity profiles and outcomes, hence we need to choose prior therapies carefully (<xref ref-type="bibr" rid="B112">112</xref>&#x2013;<xref ref-type="bibr" rid="B116">116</xref>). To minimize the occurrences of CRS and ICANS, studies are investigating combinatorial approaches with the hope that these approaches could potentially be used to decrease toxicity and increase efficacy (<xref ref-type="bibr" rid="B117">117</xref>). As a cautionary note, not all combinations will serve as effective therapies; for example efficacy outcomes and peak CAR T-cell levels seem to be similar between patients treated with axicabtagene ciloleucel plus atezolizumab (an immune checkpoint inhibitor) as part of the ZUMA-6 trial compared to historical outcomes as part of the ZUMA-1 trial for axicabtagene ciloleucel alone (<xref ref-type="bibr" rid="B118">118</xref>). These malignancies have developed resistance to therapy through alteration of the CD19 marker itself through mechanisms such as frameshift mutations leading to nonsense mutation mediated CD19 decay (<xref ref-type="bibr" rid="B81">81</xref>). Other studies found that resistance to anti-CD20 CAR T-cell therapy arose from the tumor cells downregulating the expression of CD20 (<xref ref-type="bibr" rid="B69">69</xref>). In B-cell ALL, studies found that the tumor cells switch from B-cell lineage to myeloid lineage after CAR T-cell therapy through a mixed-lineage leukemia (<italic>MLL</italic>) gene rearrangement on chromosome 11q23 (<xref ref-type="bibr" rid="B82">82</xref>). Finally, in almost all B-cell malignancies, studies have identified T-cell exhaustion as a contributing factor to the poor persistence of CAR T-cells after infusion. Furthermore, studies have found that enhanced PD-L1 pathway signaling directly contributes to T-cell exhaustion (<xref ref-type="bibr" rid="B83">83</xref>). In fact, increased PD-L1 signaling downregulates CD28 co-domain signaling &#x2013; a signal that is essential for the proper activation of CAR T-cells after the CAR molecule binds to the antigen on tumor cells (<xref ref-type="bibr" rid="B83">83</xref>). Thus, PD-L1 interferes with the proliferation and cytotoxicity of T-cells, conferring resistance to therapy (<xref ref-type="bibr" rid="B83">83</xref>). Strategies to overcome resistance are being developed and studied &#x2013; including the addition of small molecules and monoclonal antibodies (<xref ref-type="bibr" rid="B102">102</xref>).</p>
<table-wrap id="T3" position="float">
<label>Table&#xa0;3</label>
<caption>
<p>Summary of PI3K inhibitors, their clinical indications, and FDA status as of July 31, 2022.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" rowspan="2" align="center">Agent</th>
<th valign="top" rowspan="2" align="center">Target</th>
<th valign="top" colspan="4" align="center">Isoform IC<sub>50</sub>
</th>
<th valign="top" rowspan="2" align="center">Clinical indication</th>
<th valign="top" rowspan="2" align="center">FDA status</th>
<th valign="top" rowspan="2" align="center">Black box warnings</th>
</tr>
<tr>
<th valign="top" align="center">PI3K alpha</th>
<th valign="top" align="center">PI3K beta</th>
<th valign="top" align="center">PI3K gamma</th>
<th valign="top" align="center">PI3K delta</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="center">Idelalisib</td>
<td valign="top" align="center">PI3K delta</td>
<td valign="top" align="center">820</td>
<td valign="top" align="center">565</td>
<td valign="top" align="center">89</td>
<td valign="top" align="center">2.5</td>
<td valign="top" align="center">FL and SLL</td>
<td valign="top" align="left">Approved January 2014; Withdrawn January 2022</td>
<td valign="top" align="left">Fatal and serious toxicities: hepatic, severe diarrhea, colitis, pneumonitis, and intestinal perforation</td>
</tr>
<tr>
<td valign="top" align="center">Copanlisib</td>
<td valign="top" align="center">PI3K alpha and delta</td>
<td valign="top" align="center">0.5</td>
<td valign="top" align="center">3.7</td>
<td valign="top" align="center">6.4</td>
<td valign="top" align="center">0.7</td>
<td valign="top" align="center">3L FL</td>
<td valign="top" align="left">Approved June 2021</td>
<td valign="top" align="left">None</td>
</tr>
<tr>
<td valign="top" align="center">Umbralisib</td>
<td valign="top" align="center">PI3K delta and casein kinase CK1-epsilon</td>
<td valign="top" align="center">&gt;1000</td>
<td valign="top" align="center">1116</td>
<td valign="top" align="center">1065</td>
<td valign="top" align="center">22</td>
<td valign="top" align="center">2L MZL and 4L FL</td>
<td valign="top" align="left">Approved February 2021; Withdrawn June 2022</td>
<td valign="top" align="left">Not applicable</td>
</tr>
<tr>
<td valign="top" align="center">Duvelisib</td>
<td valign="top" align="center">PI3K delta and gamma</td>
<td valign="top" align="center">1602</td>
<td valign="top" align="center">85</td>
<td valign="top" align="center">27</td>
<td valign="top" align="center">2.5</td>
<td valign="top" align="center">CLL and SLL</td>
<td valign="top" align="left">Approved September 2018</td>
<td valign="top" align="left">Fatal and serious toxicities: infections, diarrhea, colitis, cutaneous reactions, and pneumonitis</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>*Parsaclisib is a PI3K delta inhibitor which was being explored in clinical trials for 3L FL; nevertheless, its application was withdrawn in January 2022. Zandelisib is a PI3K delta inhibitor that is currently still being explored in clinical trials for 3L FL at the time of this publication.</p>
</fn>
<fn>
<p>*IC<sub>50</sub>, half maximal inhibitory concentration; PI3K, phosphatidylinositol-3-kinase; CK1, casein kinase.</p>
</fn>
</table-wrap-foot>
</table-wrap>
</sec>
</sec>
<sec id="s3">
<title>Conclusion</title>
<p>Targeted therapies in lymphoproliferative disorders have made great breakthroughs in treating aggressive malignancies. However, tumor cells continually develop new strategies for survival, and thus mechanisms of resistance to even the most specific agents. We have discussed the currently understood mechanisms of resistance to the most utilized targeted agents in lymphoproliferative diseases, and this has been summarized in <xref ref-type="table" rid="T4">
<bold>Table&#xa0;4</bold>
</xref>. We also have discussed the general common themes regarding mechanisms of resistance to targeted agents, and we illustrated this in <xref ref-type="fig" rid="f1">
<bold>Figure&#xa0;1</bold>
</xref>. We eagerly await further studies that identify methods to re-sensitize tumor cells to treatment to increase response rates.</p>
<table-wrap id="T4" position="float">
<label>Table&#xa0;4</label>
<caption>
<p>Summary table of the currently available CAR T-cell therapies and their FDA-approved clinical indications as of July 31, 2022.</p>
</caption>
<table frame="hsides">
<thead>
<tr>
<th valign="top" align="center">Indication</th>
<th valign="top" align="center">Tisagenlecleucel</th>
<th valign="top" align="center">Axicabtagene ciloleucel</th>
<th valign="top" align="center">Brexucabtagene autoleucel</th>
<th valign="top" align="center">Lisocabtagene maraleucel</th>
<th valign="top" align="center">Idecabtagene vicleucel</th>
<th valign="top" align="center">Citacabtagene autoleucel</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left">R/R/ DLBCL</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
</tr>
<tr>
<td valign="top" align="left">R/R/ High-Grade B-cell Lymphoma</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
</tr>
<tr>
<td valign="top" align="left">R/R Primary Mediastinal B-cell Lymphoma</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
</tr>
<tr>
<td valign="top" align="left">R/R DLBCL Arising from Follicular Lymphoma</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
</tr>
<tr>
<td valign="top" align="left">R/R/ DLBCL Arising from Indolent Lymphoma</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
</tr>
<tr>
<td valign="top" align="left">R/R Follicular Lymphoma G1-3A</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
</tr>
<tr>
<td valign="top" align="left">R/R Follicular Lymphoma G3B</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
</tr>
<tr>
<td valign="top" align="left">R/R Mantle Cell Lymphoma</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">Yes</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
</tr>
<tr>
<td valign="top" align="left">R/R B-cell precursor acute lymphoblastic leukemia</td>
<td valign="top" align="center">Yes*</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
<td valign="top" align="center">No</td>
</tr>
</tbody>
</table>
<table-wrap-foot>
<fn>
<p>*Up to age 25 years.</p>
</fn>
</table-wrap-foot>
</table-wrap>
<fig id="f1" position="float">
<label>Figure&#xa0;1</label>
<caption>
<p>An illustrative summary of the general themes regarding mechanisms of resistance to targeted therapies.</p>
</caption>
<graphic mimetype="image" mime-subtype="tiff" xlink:href="fonc-12-948513-g001.tif"/>
</fig>
</sec>
<sec id="s4" sec-type="author-contributions">
<title>Author contributions</title>
<p>AD and JM contributed to the writing of the manuscript. All authors contributed to the article and approved the submitted version.</p>
</sec>
<sec id="s5" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>JM: consulting &#x2013; Pharmacyclics/Abbvie, Bayer, Gilead/Kite Pharma, Pfizer, Janssen, Juno/Celgene, BMS, Kyowa, Alexion, Fosunkite, Innovent, Seattle Genetics, Debiopharm, Karyopharm, Genmab, ADC Therapeutics, Epizyme, Beigene, Servier, Novartis, Morphosys/Incyte, Mei pharma, Zodiac; research funding &#x2013; Bayer, Gilead/Kite Pharma, Celgene, Merck, Portola, Incyte, Genentech, Pharmacyclics, Seattle Genetics, Janssen, Millennium. Honoraria from Targeted Oncology, OncView, Curio, Kyowa, Physicians&#x2019; Education Resource, Dava, Global clinical insights, MJH, Shanghai Youyao, and Seattle Genetics; speaker&#x2019;s bureau &#x2013; Gilead/Kite Pharma, Kyowa, Bayer, Pharmacyclics/Janssen, Seattle Genetics, Acrotech/Aurobindo, Beigene, Verastem, AstraZeneca, Celgene/BMS, Genentech/Roche.</p>
<p>The remaining author declares that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s6" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
</body>
<back>
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