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<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id>
<journal-title>Frontiers in Plant Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Plant Sci.</abbrev-journal-title>
<issn pub-type="epub">1664-462X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fpls.2019.00129</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Plant Science</subject>
<subj-group>
<subject>Perspective</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Crassulacean Acid Metabolism Abiotic Stress-Responsive Transcription Factors: a Potential Genetic Engineering Approach for Improving Crop Tolerance to Abiotic Stress</article-title>
</title-group>
<contrib-group> 
<contrib contrib-type="author">
<name><surname>Amin</surname> <given-names>Atia B.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/654901/overview"/>
</contrib> 
<contrib contrib-type="author">
<name><surname>Rathnayake</surname> <given-names>Kumudu N.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="author-notes" rid="fn002"><sup>&#x2020;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/626803/overview"/>
</contrib> 
<contrib contrib-type="author">
<name><surname>Yim</surname> <given-names>Won C.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/357802/overview"/>
</contrib> 
<contrib contrib-type="author">
<name><surname>Garcia</surname> <given-names>Travis M.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
</contrib> 
<contrib contrib-type="author">
<name><surname>Wone</surname> <given-names>Beate</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
</contrib> 
<contrib contrib-type="author">
<name><surname>Cushman</surname> <given-names>John C.</given-names></name>
<xref ref-type="aff" rid="aff2"><sup>2</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/26914/overview"/>
</contrib> 
<contrib contrib-type="author" corresp="yes">
<name><surname>Wone</surname> <given-names>Bernard W. M.</given-names></name>
<xref ref-type="aff" rid="aff1"><sup>1</sup></xref>
<xref ref-type="corresp" rid="c001"><sup>&#x002A;</sup></xref>
<uri xlink:href="http://loop.frontiersin.org/people/518047/overview"/>
</contrib>
</contrib-group>
<aff id="aff1"><sup>1</sup><institution>Department of Biology, University of South Dakota</institution>, <addr-line>Vermillion, SD</addr-line>, <country>United States</country></aff>
<aff id="aff2"><sup>2</sup><institution>Department of Biochemistry and Molecular Biology, University of Nevada, Reno</institution>, <addr-line>Reno, NV</addr-line>, <country>United States</country></aff>
<author-notes>
<fn fn-type="edited-by"><p>Edited by: Wolfram Weckwerth, University of Vienna, Austria</p></fn>
<fn fn-type="edited-by"><p>Reviewed by: Dong-Ha Oh, Louisiana State University, United States; Douglas S. Domingues, S&#x00E3;o Paulo State University (UNESP), Brazil</p></fn>
<corresp id="c001">&#x002A;Correspondence: Bernard W. M. Wone, <email>bernie.wone@usd.edu</email></corresp>
<fn fn-type="other" id="fn002"><p><sup>&#x2020;</sup>Co-first authors</p></fn>
<fn fn-type="other" id="fn003"><p>This article was submitted to Plant Systems and Synthetic Biology, a section of the journal Frontiers in Plant Science</p></fn></author-notes>
<pub-date pub-type="epub">
<day>22</day>
<month>02</month>
<year>2019</year>
</pub-date>
<pub-date pub-type="collection">
<year>2019</year>
</pub-date>
<volume>10</volume>
<elocation-id>129</elocation-id>
<history>
<date date-type="received">
<day>29</day>
<month>09</month>
<year>2018</year>
</date>
<date date-type="accepted">
<day>25</day>
<month>01</month>
<year>2019</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#x00A9; 2019 Amin, Rathnayake, Yim, Garcia, Wone, Cushman and Wone.</copyright-statement>
<copyright-year>2019</copyright-year>
<copyright-holder>Amin, Rathnayake, Yim, Garcia, Wone, Cushman and Wone</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/"><p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p></license>
</permissions>
<abstract>
<p>This perspective paper explores the utilization of abiotic stress-responsive transcription factors (TFs) from crassulacean acid metabolism (CAM) plants to improve abiotic stress tolerance in crop plants. CAM is a specialized type of photosynthetic adaptation that enhances water-use efficiency (WUE) by shifting CO<sub>2</sub> uptake to all or part of the nighttime when evaporative water losses are minimal. Recent studies have shown that TF-based genetic engineering could be a useful approach for improving plant abiotic stress tolerance because of the role of TFs as master regulators of clusters of stress-responsive genes. Here, we explore the use of abiotic stress-responsive TFs from CAM plants to improve abiotic stress tolerance and WUE in crops by controlling the expression of gene cohorts that mediate drought-responsive adaptations. Recent research has revealed several TF families including <italic>AP2/ERF</italic>, <italic>MYB, WRKY, NAC</italic>, <italic>NF-Y</italic>, and <italic>bZIP</italic> that might regulate water-deficit stress responses and CAM in the inducible CAM plant <italic>Mesembryanthemum crystallinum</italic> under water-deficit stress-induced CAM and in the obligate CAM plant <italic>Kalanchoe fedtschenkoi</italic>. Overexpression of genes from these families in <italic>Arabidopsis thaliana</italic> can improve abiotic stress tolerance in <italic>A. thaliana</italic> in some instances. Therefore, we propose that TF-based genetic engineering with a small number of CAM abiotic stress-responsive TFs will be a promising strategy for improving abiotic stress tolerance and WUE in crop plants in a projected hotter and drier landscape in the 21st-century and beyond.</p>
</abstract>
<kwd-group>
<kwd>abiotic stress response</kwd>
<kwd>crassulacean acid metabolism</kwd>
<kwd>drought tolerance</kwd>
<kwd>extremophytes</kwd>
<kwd>genetic engineering</kwd>
<kwd>transcription factor</kwd>
</kwd-group>
<contract-num rid="cn001">A18-0015-001</contract-num>
<contract-num rid="cn002">DE-SC0008834</contract-num>
<contract-sponsor id="cn001">South Dakota Board of Regents<named-content content-type="fundref-id">10.13039/100008629</named-content></contract-sponsor>
<contract-sponsor id="cn002">U.S. Department of Energy<named-content content-type="fundref-id">10.13039/100000015</named-content></contract-sponsor>
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<fig-count count="0"/>
<table-count count="2"/>
<equation-count count="0"/>
<ref-count count="80"/>
<page-count count="8"/>
<word-count count="0"/>
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</article-meta>
</front>
<body>
<sec><title>Introduction</title>
<p>Formidable challenges facing humankind include a burgeoning global human population (<xref ref-type="bibr" rid="B25">Godfray et al., 2010</xref>; <xref ref-type="bibr" rid="B24">Gerland et al., 2014</xref>) and the increasing frequency and intensity of droughts related to global warming (<xref ref-type="bibr" rid="B13">Cook et al., 2014</xref>; <xref ref-type="bibr" rid="B59">Singh et al., 2015</xref>). In addition, abiotic stresses including high salinity, temperature extremes, increased UV radiation, heavy metals, and high light intensities are and will continue to be major constraints for global crop production and food security (<xref ref-type="bibr" rid="B37">Lesk et al., 2016</xref>). Among these abiotic stresses, drought is of major concern as it has dire effects on crop productivity (<xref ref-type="bibr" rid="B20">Fahad et al., 2017</xref>), plant growth, and development (<xref ref-type="bibr" rid="B77">Yordanov et al., 2000</xref>). By the end of the 21st century, rapid changes in the global climate will likely increase the frequencies of drought by more than 20% compared to current rates (<xref ref-type="bibr" rid="B42">Lobell et al., 2011</xref>; <xref ref-type="bibr" rid="B13">Cook et al., 2014</xref>). Indeed, <xref ref-type="bibr" rid="B18">Daryanto et al. (2016)</xref> showed that an approximately 40% decrease in water availability can decrease wheat (<italic>Triticum aestivum</italic> L.) and maize (<italic>Zea mays</italic> L.) yields by 20.6% and 39.3%, respectively. High salinity, another abiotic stress that is harmful to crop production, affects 20% of total cultivated and 33% of irrigated agricultural lands worldwide (<xref ref-type="bibr" rid="B57">Shrivastava and Kumar, 2015</xref>). Similarly, low temperatures and heatwaves cause significant reduction in crop yields across the world (<xref ref-type="bibr" rid="B55">Sanghera et al., 2011</xref>; <xref ref-type="bibr" rid="B9">Challinor et al., 2014</xref>; <xref ref-type="bibr" rid="B28">Hatfield and Prueger, 2015</xref>). Thus, novel approaches to mitigate the negative impacts of abiotic stresses on crop yields must be explored and developed to avoid socio-economic collapse due to climate change.</p>
<p>Approaches to enhance sustainable bioenergy production by engineering the CAM pathway into C<sub>3</sub> crops to enhance their water-use efficiency (WUE) on marginal lands are already underway (<xref ref-type="bibr" rid="B5">Borland et al., 2014</xref>, <xref ref-type="bibr" rid="B6">2015</xref>; <xref ref-type="bibr" rid="B74">Yang et al., 2015</xref>; <xref ref-type="bibr" rid="B41">Liu et al., 2018</xref>). Another approach to enhance abiotic stress tolerance is to modulate the expression of transcription factors (TFs) or the functions of abiotic stress-adaptive genes that might already be present, but that are not normally expressed in unstressed or C<sub>3</sub> plants (<xref ref-type="bibr" rid="B33">Hussain et al., 2011</xref>; <xref ref-type="bibr" rid="B51">Rabara et al., 2014</xref>; <xref ref-type="bibr" rid="B35">Joshi et al., 2016</xref>; <xref ref-type="bibr" rid="B70">Wang et al., 2016</xref>; <xref ref-type="bibr" rid="B3">Bechtold, 2018</xref>). This approach would involve bioengineering a small number of regulatory genes with potentially global effects made possible by the role of TFs in gene regulation (<xref ref-type="bibr" rid="B51">Rabara et al., 2014</xref>; <xref ref-type="bibr" rid="B35">Joshi et al., 2016</xref>).</p>
<p>Transcription factor-based genetic engineering could direct such regulatory TFs to modulate a large number of downstream abiotic stress-responsive genes (<xref ref-type="bibr" rid="B51">Rabara et al., 2014</xref>). Stress tolerance in plants is generally under polygenic control (<xref ref-type="bibr" rid="B65">Tran et al., 2010</xref>) and some of the genes regulating stress-tolerance responses happen to code for TFs (<xref ref-type="bibr" rid="B68">Villalobos et al., 2004</xref>; <xref ref-type="bibr" rid="B50">Qiu and Yu, 2009</xref>; <xref ref-type="bibr" rid="B79">Zhang et al., 2011</xref>; <xref ref-type="bibr" rid="B73">Yang et al., 2012</xref>; <xref ref-type="bibr" rid="B8">Cai et al., 2014</xref>; <xref ref-type="bibr" rid="B10">Chen et al., 2014</xref>; <xref ref-type="bibr" rid="B61">Swain et al., 2017</xref>). Therefore, TFs might be ideal candidate regulators for improving abiotic stress tolerance in crop plants. To date, TF-based genetic engineering has mainly repurposed TFs from <italic>Arabidopsis thaliana</italic>, <italic>Glycine max</italic>, <italic>Oryza sativa</italic>, and <italic>T. aestivum</italic> (<xref ref-type="bibr" rid="B51">Rabara et al., 2014</xref>; <xref ref-type="bibr" rid="B35">Joshi et al., 2016</xref>; <xref ref-type="bibr" rid="B70">Wang et al., 2016</xref>). As far as we know, no reports have analyzed the effects of overexpressing TFs from crassulacean acid metabolism (CAM) plants which have greater abiotic stress tolerances than mesophytes. Most CAM plants are naturally adapted to low-water environments and many other abiotic stresses compared to the agronomically important C<sub>3</sub> plants (<xref ref-type="bibr" rid="B4">Borland et al., 2009</xref>). Here, we consider using a &#x201C;next-generation TF-based&#x201D; approach to exploit abiotic stress-responsive TFs from CAM plants to improve abiotic stress tolerance in crop plants. The current technologies for TF-based approaches to improve plant abiotic stress tolerance have been extensively discussed and reviewed by <xref ref-type="bibr" rid="B51">Rabara et al. (2014)</xref>, <xref ref-type="bibr" rid="B35">Joshi et al. (2016)</xref>, and <xref ref-type="bibr" rid="B70">Wang et al. (2016)</xref>, and those details are therefore only briefly summarized below.</p>
</sec>
<sec><title>Transcription Factor-Based Approach</title>
<p>Plants are sessile organisms that exhibit various biochemical, physiological, and molecular adaptations to extreme environments (<xref ref-type="bibr" rid="B35">Joshi et al., 2016</xref>). For instance, water-deficit stress activates the expression of stress-responsive genes encoding enzymes that synthesize compatible protective sugars, antioxidants, and proteins, including heat shock proteins and some classes of late embryogenesis abundant (LEA) proteins (<xref ref-type="bibr" rid="B65">Tran et al., 2010</xref>; <xref ref-type="bibr" rid="B35">Joshi et al., 2016</xref>; <xref ref-type="bibr" rid="B70">Wang et al., 2016</xref>). In addition to the stress-induced upregulation of the above proteins, the expression of various regulatory proteins including TFs, protein kinases, and protein phosphatases is also activated (<xref ref-type="bibr" rid="B70">Wang et al., 2016</xref>).</p>
<p>Transcription factors are master regulators of many cellular processes and can also interact with other transcriptional regulators (<xref ref-type="bibr" rid="B35">Joshi et al., 2016</xref>). Importantly, they play a pivotal role in different abiotic stress responses by binding to the upstream <italic>cis</italic>-regions of promoters in many stress-responsive genes (<xref ref-type="bibr" rid="B72">Yamaguchi-Shinozaki and Shinozaki, 2006</xref>). Many studies have been conducted to identify and characterize families of TFs including <italic>AP2/ERFBP</italic>, <italic>MYB</italic>, <italic>WRKY</italic>, <italic>NAC</italic>, <italic>NF-Y</italic>, and <italic>bZIP</italic> that are involved in abiotic stress responses (<xref ref-type="bibr" rid="B66">Umezawa et al., 2006</xref>; <xref ref-type="bibr" rid="B26">Golldack et al., 2011</xref>; <xref ref-type="bibr" rid="B38">Leyva-Gonz&#x00E1;lez et al., 2012</xref>; <xref ref-type="bibr" rid="B70">Wang et al., 2016</xref>; <xref ref-type="bibr" rid="B61">Swain et al., 2017</xref>; <xref ref-type="bibr" rid="B78">Zanetti et al., 2017</xref>). Several TFs have already been overexpressed in crop plants and <italic>A. thaliana</italic> to improve abiotic stress tolerance (<xref ref-type="bibr" rid="B50">Qiu and Yu, 2009</xref>; <xref ref-type="bibr" rid="B79">Zhang et al., 2011</xref>; <xref ref-type="bibr" rid="B73">Yang et al., 2012</xref>; <xref ref-type="bibr" rid="B8">Cai et al., 2014</xref>; <xref ref-type="bibr" rid="B10">Chen et al., 2014</xref>). For example, the NAC family is one of the largest TF families in plants and is involved not only in plant growth and development, but also in transcriptional reprogramming associated with plant stress responses (<xref ref-type="bibr" rid="B65">Tran et al., 2010</xref>; <xref ref-type="bibr" rid="B47">Nakashima et al., 2012</xref>). <xref ref-type="bibr" rid="B43">Mao et al. (2012)</xref> reported that overexpression of the <italic>TaNAC2</italic> gene from wheat can enhance tolerance to drought, salt, and freezing stresses in <italic>A. thaliana</italic>. In addition, functional characterization of the <italic>NAC045</italic> (<xref ref-type="bibr" rid="B80">Zheng et al., 2009</xref>) and <italic>SNAC1</italic> genes from <italic>O. sativa</italic> enhanced drought and salt tolerance in rice (<xref ref-type="bibr" rid="B31">Hu et al., 2006</xref>). Furthermore, overexpression of either <italic>GmMYB76</italic> or <italic>GmMYB177</italic> from soybean significantly enhanced salt and freezing tolerance in <italic>A. thaliana</italic> (<xref ref-type="bibr" rid="B39">Liao et al., 2008</xref>).</p>
<p>A relatively less explored yet high-potential approach is to discover novel abiotic stress-adaptive regulatory genes in extremophytes (i.e., CAM xerophytes and halophytes, desiccation-tolerant plants, or resurrection plants) to use for bioengineering abiotic stress tolerance in crop plants (<xref ref-type="bibr" rid="B34">Inan et al., 2004</xref>; <xref ref-type="bibr" rid="B56">Shi et al., 2013</xref>; <xref ref-type="bibr" rid="B35">Joshi et al., 2016</xref>; <xref ref-type="bibr" rid="B3">Bechtold, 2018</xref>). For example, the overexpression of the TF <italic>CpMYB10</italic> from the resurrection plant <italic>Craterostigma plantagineum</italic> in <italic>A. thaliana</italic> led to desiccation and salt tolerance in transgenic lines (<xref ref-type="bibr" rid="B68">Villalobos et al., 2004</xref>).</p>
</sec>
<sec><title>Crassulacean Acid Metabolism and Abiotic Stress Tolerance</title>
<p>CAM plants have evolved a specialized type of photosynthetic adaptation that allows them to live under conditions of severe water deficit and in semi-arid and arid regions of the world including deserts. These plants have shifted all or part of their primary CO<sub>2</sub> uptake and fixation to the nighttime, when evaporative water losses are minimal, and perform C<sub>3</sub> carboxylation reactions when stomata are closed during the daytime. This temporal separation of carbon fixation leads to the formation of the four-carbon organic acid malate, which is stored in the vacuole during the night and subsequently undergoes decarboxylation to release CO<sub>2</sub> for re-fixation during the day to produce carbohydrates (<xref ref-type="bibr" rid="B4">Borland et al., 2009</xref>). Because of this temporal separation of carbon fixation and inverted stomatal behavior, CAM plants can reduce water loss due to transpiration. These characteristics also allow CAM plants to fix net CO<sub>2</sub> 15% more efficiently than C<sub>3</sub> plants (<xref ref-type="bibr" rid="B48">Nobel, 1991</xref>) resulting in increased biomass of CAM plants while using less water than C<sub>3</sub> plants. Additionally, CAM plants can produce similar amounts of biomass using 80% less water in comparison to C<sub>3</sub> plants (<xref ref-type="bibr" rid="B49">Nobel, 1996</xref>; <xref ref-type="bibr" rid="B4">Borland et al., 2009</xref>). Thus, CAM plants have between 3- and 6-fold higher WUE than C<sub>4</sub> and C<sub>3</sub> plants, respectively (<xref ref-type="bibr" rid="B22">Garcia et al., 2014</xref>; <xref ref-type="bibr" rid="B74">Yang et al., 2015</xref>).</p>
<p>In addition to their higher WUE and associated drought tolerance (<xref ref-type="bibr" rid="B75">Yang et al., 2017</xref>), CAM plants can tolerate high temperature up to 70&#x00B0;C, whereas C<sub>3</sub> plants can tolerate only 50&#x2013;55&#x00B0;C (<xref ref-type="bibr" rid="B4">Borland et al., 2009</xref>). CAM halophytes can also adapt to high salinity, as during the induction of CAM by salt stress in <italic>Mesembryanthemum crystallinum</italic> (<xref ref-type="bibr" rid="B71">Winter and Holtum, 2014</xref>). Moreover, CAM plants can better tolerate higher light intensities (>1000 &#x03BC;mol m<sup>-2</sup> s<sup>-1</sup>) and UV-B irradiation levels than can agronomically important C<sub>3</sub> plants (<xref ref-type="bibr" rid="B4">Borland et al., 2009</xref>). Furthermore, CAM plants can increase daily net CO<sub>2</sub> uptake under increased atmospheric CO<sub>2</sub> concentrations, which might be advantageous in global climate change scenarios (<xref ref-type="bibr" rid="B49">Nobel, 1996</xref>). Some CAM plants such as <italic>Agave salmiana, Opuntia ficus-indica</italic>, and <italic>Stenocereus queretaroensis</italic> can also survive in subzero temperatures, and <italic>Agave utahensis</italic> Engelm. can tolerate temperatures as low as -18&#x00B0;C (<xref ref-type="bibr" rid="B49">Nobel, 1996</xref>).</p>
<p>The abiotic stress-adaptive characteristics of CAM plants will be particularly beneficial for adapting to the consequences of anthropogenic climate change, such as droughts and heatwaves, high soil salinity, temperature extremes, and high light or UV-B irradiation. Many of the stress-adaptive responses involve abscisic acid (ABA)-dependent and -independent response pathways (<xref ref-type="bibr" rid="B60">Song et al., 2016</xref>). ABA-dependent and independent signaling events likely participate in the stress-activation of CAM in <italic>M. crystallinum</italic> (<xref ref-type="bibr" rid="B12">Chu et al., 1990</xref>; <xref ref-type="bibr" rid="B62">Taybi and Cushman, 1999</xref>, <xref ref-type="bibr" rid="B63">2002</xref>; <xref ref-type="bibr" rid="B1">Abdin et al., 2002</xref>; <xref ref-type="bibr" rid="B16">Cushman and Borland, 2002</xref>), suggesting that the CAM pathway likely has evolved in response to abiotic stress (<xref ref-type="bibr" rid="B52">Reyes-Garc&#x00ED;a and Andrade, 2009</xref>; <xref ref-type="bibr" rid="B30">Heyduk et al., 2018</xref>; <xref ref-type="bibr" rid="B76">Yin et al., 2018</xref>).</p>
<p>Crassulacean acid metabolism is thought to have evolved independently multiple times from ancestral C<sub>3</sub> plants (<xref ref-type="bibr" rid="B58">Silvera et al., 2010</xref>) because no unique metabolic pathways are required, although some CAM-specific variant enzymes apparently evolved in some instances (<xref ref-type="bibr" rid="B19">Ermolova et al., 2003</xref>; <xref ref-type="bibr" rid="B23">Gehrig et al., 2005</xref>; <xref ref-type="bibr" rid="B67">Vaasen et al., 2006</xref>). However, temporal changes in gene expression of the CAM enzyme variants likely occurred because of alterations in their regulation compared to their orthologs in C<sub>3</sub> plants (<xref ref-type="bibr" rid="B29">Hermans and Westhoff, 1990</xref>; <xref ref-type="bibr" rid="B36">Lepiniec et al., 1993</xref>; <xref ref-type="bibr" rid="B15">Cushman et al., 2008</xref>; <xref ref-type="bibr" rid="B30">Heyduk et al., 2018</xref>; <xref ref-type="bibr" rid="B76">Yin et al., 2018</xref>). Furthermore, the ABA-dependent stress response pathway is involved in CAM activation not only in <italic>M. crystallinum</italic> (<xref ref-type="bibr" rid="B63">Taybi and Cushman, 2002</xref>), but also in other CAM species (<xref ref-type="bibr" rid="B64">Taybi et al., 1995</xref>; <xref ref-type="bibr" rid="B53">Rodrigues et al., 2016</xref>; <xref ref-type="bibr" rid="B76">Yin et al., 2018</xref>). Although CAM is found in over 36 families of vascular plants (<xref ref-type="bibr" rid="B58">Silvera et al., 2010</xref>), we rely on only a few major CAM species such as pineapple (<italic>Ananas comosus</italic>), <italic>Agave</italic>, and <italic>Opuntia</italic> as agricultural crops to provide food, forage, fiber, and biofuels (<xref ref-type="bibr" rid="B17">Cushman et al., 2015</xref>). Well characterized CAM model species also provide abundant resources for the identification and selection of candidate TFs involved in abiotic stress adaptations (<xref ref-type="bibr" rid="B27">Hartwell et al., 2016</xref>). Hence, identification of candidate CAM pathway regulators (i.e., TFs) that are expressed or activated under water-deficit stress or CAM should be prioritized to exploit the molecular and regulatory machinery of abiotic stress adaptation in CAM plants as a vital resource for applications in C<sub>3</sub> crop species (<xref ref-type="bibr" rid="B74">Yang et al., 2015</xref>; <xref ref-type="bibr" rid="B21">Fernie, 2016</xref>; <xref ref-type="bibr" rid="B76">Yin et al., 2018</xref>).</p>
</sec>
<sec><title>Cam Abiotic Stress-Responsive TF-Based Approach</title>
<p>Bioengineering a TF that can confer desirable traits such as increased drought tolerance (<xref ref-type="bibr" rid="B68">Villalobos et al., 2004</xref>) or increased biomass (<xref ref-type="bibr" rid="B40">Lim et al., 2018</xref>) into C<sub>3</sub> <italic>A. thaliana</italic> will be crucial as a proof of concept for the CAM abiotic stress-responsive TF-based approach to increase abiotic stress tolerance in C<sub>3</sub> plants. Fortunately, genetic resources (i.e., genome and transcriptome sequences) for CAM plants are now available for <italic>Agave</italic> (<xref ref-type="bibr" rid="B2">Abraham et al., 2016</xref>), <italic>Kalanchoe</italic> spp. (<xref ref-type="bibr" rid="B75">Yang et al., 2017</xref>), pineapple (<xref ref-type="bibr" rid="B44">Ming et al., 2015</xref>, <xref ref-type="bibr" rid="B45">2016</xref>; <xref ref-type="bibr" rid="B69">Wai et al., 2017</xref>), and <italic>M. crystallinum</italic> (<xref ref-type="bibr" rid="B11">Chiang et al., 2016</xref>). Although genetic resources for CAM plants are becoming readily available, the underlying regulatory basis of CAM is still not completely understood. Many TFs of unknown function have been identified during recent genome and transcriptome sequencing efforts; thus, there are now many opportunities to analyze the functions of TFs involved in water-deficit-stress response or CAM function and to exploit the potential of bioengineering using CAM plant TFs to improve abiotic stress tolerance in crop plants. Indeed, candidate CAM TFs involved in C<sub>3</sub> to CAM transition in obligate CAM species of <italic>Agave</italic> (<xref ref-type="bibr" rid="B30">Heyduk et al., 2018</xref>; <xref ref-type="bibr" rid="B32">Huang et al., 2018</xref>; <xref ref-type="bibr" rid="B76">Yin et al., 2018</xref>), <italic>Kanlanchoe</italic> (<xref ref-type="bibr" rid="B46">Moseley et al., 2018</xref>), and <italic>Manfreda</italic> (<xref ref-type="bibr" rid="B30">Heyduk et al., 2018</xref>), and weak CAM species of <italic>Polianthes</italic> and <italic>Beschorneria</italic> (<xref ref-type="bibr" rid="B30">Heyduk et al., 2018</xref>), or the induction of CAM in <italic>Tralinum triangulare</italic> (<xref ref-type="bibr" rid="B7">Brilhaus et al., 2016</xref>) have been identified. Not surprisingly, a number of these candidate TFs are involved in the ABA stress responsive pathway (<xref ref-type="bibr" rid="B30">Heyduk et al., 2018</xref>; <xref ref-type="bibr" rid="B76">Yin et al., 2018</xref>). More importantly though, many of these candidate TFs are involved in the rewiring of the phase shift from C<sub>3</sub> to CAM transition in the evolution of CAM photosynthesis (<xref ref-type="bibr" rid="B30">Heyduk et al., 2018</xref>; <xref ref-type="bibr" rid="B46">Moseley et al., 2018</xref>; <xref ref-type="bibr" rid="B76">Yin et al., 2018</xref>). Although it would be interesting to attempt to reprogram a C<sub>3</sub> plant such that it becomes CAM performing, we are not suggesting to shift gene expression patterns of CAM pathway genes that might be present in extant C<sub>3</sub> plants, or to regulate the engineered CAM pathway in C<sub>3</sub> plants (<xref ref-type="bibr" rid="B74">Yang et al., 2015</xref>; <xref ref-type="bibr" rid="B21">Fernie, 2016</xref>; <xref ref-type="bibr" rid="B30">Heyduk et al., 2018</xref>; <xref ref-type="bibr" rid="B76">Yin et al., 2018</xref>), but rather identify and exploit the TFs involved in abiotic stress responses from obligate and inducible CAM plants to modulate the expression of appropriate genes in C<sub>3</sub> plants to improve their abiotic stress tolerance.</p>
<p>Eight most abundant candidate TFs under water-deficit stress diel and zeitgeber time have been identified that might regulate the CAM state, water-deficit stress response, or both in <italic>M. crystallinum</italic> (<xref ref-type="bibr" rid="B22">Garcia et al., 2014</xref>; Cushman, unpubl. data; <xref ref-type="table" rid="T1">Table 1</xref>). <italic>Mesembryanthemum crystallinum</italic> switches from C<sub>3</sub> to CAM when salt or water-deficit stressed (<xref ref-type="bibr" rid="B14">Cushman, 2001</xref>; <xref ref-type="bibr" rid="B16">Cushman and Borland, 2002</xref>; <xref ref-type="bibr" rid="B63">Taybi and Cushman, 2002</xref>). <italic>Kalanchoe fedtschenkoi</italic> orthologs of these top candidate TFs were also highly expressed during CAM induction in older leaf pairs of <italic>K. fedtschenkoi</italic> plants (<xref ref-type="bibr" rid="B22">Garcia et al., 2014</xref>; Cushman, unpubl. data). It is known that young leaves are C<sub>3</sub> performing, whereas mature leaves are CAM performing in <italic>K. fedtschenkoi</italic> (<xref ref-type="bibr" rid="B14">Cushman, 2001</xref>). These TFs share a base mean expression level of >100 FPKM and at least two-fold induction during a transition from C<sub>3</sub> to CAM or imposition of water-deficit stress in <italic>K. fedtschenkoi</italic> and <italic>M. crystallinum</italic>, respectively (<xref ref-type="bibr" rid="B22">Garcia et al., 2014</xref>; Cushman, unpubl. data). These candidate CAM TFs also belong to the families of TFs reported to be involved in abiotic stress responses (<xref ref-type="bibr" rid="B51">Rabara et al., 2014</xref>; <xref ref-type="bibr" rid="B35">Joshi et al., 2016</xref>; <xref ref-type="bibr" rid="B54">Roy, 2016</xref>; <xref ref-type="bibr" rid="B70">Wang et al., 2016</xref>). Orthologs of these candidate CAM TFs in <italic>A. thaliana</italic> also have several reported functions in plant development and abiotic stress tolerance (<xref ref-type="bibr" rid="B80">Zheng et al., 2009</xref>; <xref ref-type="bibr" rid="B79">Zhang et al., 2011</xref>; <xref ref-type="bibr" rid="B73">Yang et al., 2012</xref>; <xref ref-type="bibr" rid="B10">Chen et al., 2014</xref>; <xref ref-type="bibr" rid="B61">Swain et al., 2017</xref>; <xref ref-type="bibr" rid="B78">Zanetti et al., 2017</xref>). Intriguingly, recent functional characterization of two putative CAM regulators of water-deficit stress response or CAM activation <italic>via</italic> overexpression in <italic>A. thaliana</italic> strongly suggest that CAM TFs have high potential to increase tolerance to drought and other abiotic stresses in C<sub>3</sub> plants.</p>
<table-wrap position="float" id="T1">
<label>Table 1</label>
<caption><p>List of the top eight candidate transcription factors (TFs) from the inducible CAM plant <italic>Mesembryanthemum crystallinum</italic> and top eight candidate TFs from the obligate CAM plant <italic>Kalanchoe fedtschenkoi</italic> hypothesized to regulate the CAM state or water-deficit stress responses in CAM plants and their corresponding orthologs in <italic>Arabidopsis thaliana</italic>.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">TF Name</th>
<th valign="top" align="left">TF Family</th>
<th valign="top" align="left"><italic>A. thaliana</italic> Locus ID</th>
<th valign="top" align="left">Functional annotation of <italic>A. thaliana</italic> ortholog at TAIR</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><italic>McERF74</italic></td>
<td valign="top" align="left">AP2/ERF/CRF</td>
<td valign="top" align="left">AT1G53910</td>
<td valign="top" align="left">Detection of hypoxia, ethylene-activated signaling pathway, regulation of root development, response to hypoxia</td>
</tr>
<tr>
<td valign="top" align="left"><italic>McNAC29</italic></td>
<td valign="top" align="left">NAC</td>
<td valign="top" align="left">AT1G69490</td>
<td valign="top" align="left">Embryo development ending in seed dormancy, flower development, fruit ripening, leaf senescence, multicellular organism development, multidimensional cell growth, regulation of transcription</td>
</tr>
<tr>
<td valign="top" align="left"><italic>McBLH1</italic></td>
<td valign="top" align="left">HB/Homeodomain</td>
<td valign="top" align="left">AT2G35940</td>
<td valign="top" align="left">Polar nuclei fusion, response to abscisic acid, response to continuous far red-light stimulus by the high-irradiance response system, response to symbiotic fungus</td>
</tr>
<tr>
<td valign="top" align="left"><italic>McbZIP2</italic></td>
<td valign="top" align="left">bZIP</td>
<td valign="top" align="left">AT2G18160</td>
<td valign="top" align="left">Positive regulation of transcription</td>
</tr>
<tr>
<td valign="top" align="left"><italic>McAGL8</italic></td>
<td valign="top" align="left">MADS/AGAMOUS -LIKE 8</td>
<td valign="top" align="left">AT5G60910</td>
<td valign="top" align="left">Cell differentiation, developmental growth involved in morphogenesis, positive regulation of flower development, fruit development, maintenance of inflorescence meristem identity</td>
</tr>
<tr>
<td valign="top" align="left"><italic>McAP2-12</italic></td>
<td valign="top" align="left">AP2/ERF</td>
<td valign="top" align="left">AT1G53910</td>
<td valign="top" align="left">Detection of hypoxia, ethylene-activated signaling pathway, regulation of root development, response to hypoxia</td>
</tr>
<tr>
<td valign="top" align="left"><italic>McbZIP44</italic></td>
<td valign="top" align="left">bZIP</td>
<td valign="top" align="left">AT1G75390</td>
<td valign="top" align="left">Positive regulation of transcription, seed germination</td>
</tr>
<tr>
<td valign="top" align="left"><italic>McHB7</italic></td>
<td valign="top" align="left">HB/Homeobox</td>
<td valign="top" align="left">AT2G46680</td>
<td valign="top" align="left">Abscisic acid-activated signaling pathway, positive regulation of transcription, response to water deprivation</td>
</tr>
<tr>
<td valign="top" align="left"><italic>KfMYB59</italic></td>
<td valign="top" align="left">MYB</td>
<td valign="top" align="left">AT5G59780</td>
<td valign="top" align="left">Cell differentiation, response to cadmium ions, response to ethylene, response to gibberellin, response to NaCl</td>
</tr>
<tr>
<td valign="top" align="left"><italic>KfLHY1</italic></td>
<td valign="top" align="left">Homeodomain</td>
<td valign="top" align="left">AT1G01060</td>
<td valign="top" align="left">Circadian rhythm, long-day photoperiodism, flowering, response to abscisic acid, response to auxin, response to NaCl</td>
</tr>
<tr>
<td valign="top" align="left"><italic>KfBZIP29</italic></td>
<td valign="top" align="left">bZIP</td>
<td valign="top" align="left">AT4G38900</td>
<td valign="top" align="left">Regulation of transcription, reproductive shoot system and development</td>
</tr>
<tr>
<td valign="top" align="left"><italic>KfNF-YB3</italic></td>
<td valign="top" align="left">NF-Ys</td>
<td valign="top" align="left">AT4G14540</td>
<td valign="top" align="left">Regulation of transcription, protein heterodimerization</td>
</tr>
<tr>
<td valign="top" align="left"><italic>KfNAC83</italic></td>
<td valign="top" align="left">NAC</td>
<td valign="top" align="left">AT5G13180</td>
<td valign="top" align="left">Lignin biosynthetic process, plant-type secondary cell wall biogenesis, fruit dehiscence</td>
</tr>
<tr>
<td valign="top" align="left"><italic>KfAP2</italic></td>
<td valign="top" align="left">AP2/ERF/CRF</td>
<td valign="top" align="left">AT4G11140</td>
<td valign="top" align="left">Cotyledon development cytokinin-activated signaling pathway, ethylene-activated signaling pathway, leaf development</td>
</tr>
<tr>
<td valign="top" align="left"><italic>KfCOL3</italic> (010148t1)</td>
<td valign="top" align="left">Zinc Finger CONSTANS-like 4</td>
<td valign="top" align="left">AT5G24930</td>
<td valign="top" align="left">Red light signaling pathway, regulator of flower development, regulation of photomorphogenesis</td>
</tr>
<tr>
<td valign="top" align="left"><italic>KfCOL5</italic> (00914t1)</td>
<td valign="top" align="left">Zinc Finger CONSTANS-like 5</td>
<td valign="top" align="left">AT5G57660</td>
<td valign="top" align="left">Regulation of flower development, regulation of transcription, response to light stimulus</td></tr>
<tr>
<td valign="top" align="left"></td></tr></tbody></table>
<table-wrap-foot>
<attrib><italic>We are only reporting functions related to transcriptional activation and abiotic stress for the A. thaliana ortholog from the Arabidopsis Information Resource (TAIR) databases (<ext-link ext-link-type="uri" xlink:href="https://www.arabidopsis.org/">https://www.arabidopsis.org/</ext-link>) in the table.</italic></attrib>
</table-wrap-foot>
</table-wrap>
<p>One of these candidate CAM TFs is a myeloblastosis (MYB59, closest ortholog in <italic>Arabidopsis</italic>) TF whose transcripts are 20-fold more abundant in CAM-performing older leaf pairs relative to C<sub>3</sub>-performing younger leaves in <italic>K. fedtschenkoi</italic> (Hartwell et al. unpubl. data). Results from four, third-generation (T<sub>3</sub>) transgenic lines carrying the <italic>KlMYB59</italic> indicate increased rosette size and biomass at 4-week-old juvenile stage, and increased shoot length at 8-week-old mature stage in transgenic plants compared to WT (<xref ref-type="table" rid="T2">Table 2</xref>; Wone et al., unpubl. data; full results being presented in a separate publication). However, transgenic lines show delayed flowering in long-day photoperiod compared to WT plants (16 h light/8 h dark). In addition, these transgenic lines exhibit increased integrated WUE compared to WT plants. Furthermore, transgenic lines have longer primary roots despite exposure to 50 &#x03BC;M selenium compared to WT plants. In addition to MYB59, transcripts of the NAC83 TF (closest ortholog in <italic>Arabidopsis</italic>) were also more highly expressed in CAM-performing leaves of <italic>K. laxiflora</italic> and <italic>K. fedtschenkoi</italic> relative to C<sub>3</sub>-performing leaves (Cushman et al., unpubl. data). The function of this <italic>K. fedtschenkoi</italic> NAC83 TF (<italic>KfNAC83</italic>) is not known in CAM- or C<sub>3</sub>-performing CAM plants, but its <italic>A. thaliana</italic> ortholog suggests roles in abiotic stress responses and development (<xref ref-type="table" rid="T1">Table 1</xref>). Functional characterization of <italic>KfNAC83</italic> shows enhanced water-deficit stress tolerance and increased integrated WUE in four independent transgenic T<sub>3</sub>-generation <italic>A. thaliana</italic> lines compared to WT plants (<xref ref-type="table" rid="T2">Table 2</xref>; Wone et al., unpubl. data; full results being presented in a separate publication). Furthermore, <italic>KfNAC83</italic>-overexpressing lines show significantly increased rosette size, leaves in the mature rosette, shoot biomass, number of siliques, and lateral roots compared to WT. Interestingly, these transgenic lines also showed tolerance to 150 mM NaCl. Collectively, our characterization results strongly suggest that at least two of these candidate CAM TFs have functions in abiotic stress responses and CAM photosynthesis.</p>
<table-wrap position="float" id="T2">
<label>Table 2</label>
<caption><p>Results from T<sub>3</sub> transgenic <italic>A. thaliana</italic> lines overexpressing candidate CAM TFs from the obligate CAM plant <italic>K. fedtschenkoi</italic> hypothesized to regulate water-deficit stress response or CAM activation.</p></caption>
<table cellspacing="5" cellpadding="5" frame="hsides" rules="groups">
<thead>
<tr>
<th valign="top" align="left">CAM-related transcription factor</th>
<th valign="top" align="center">Integrated WUE</th>
<th valign="top" align="center">Drought tolerance</th>
<th valign="top" align="center">NaCl tolerance</th>
<th valign="top" align="center">Heavy metal tolerance</th>
<th valign="top" align="center">Biomass</th>
<th valign="top" align="center">Timing of bolting</th>
<th valign="top" align="center">Lateral roots</th>
<th valign="top" align="center">Root hairs</th>
</tr>
</thead>
<tbody>
<tr>
<td valign="top" align="left"><italic>KfMYB59</italic></td>
<td valign="top" align="center">Enhanced</td>
<td valign="top" align="center">NC</td>
<td valign="top" align="center">100 mM NaCl</td>
<td valign="top" align="center">50 &#x03BC;M Na<sub>2</sub>SeO<sub>4</sub></td>
<td valign="top" align="center">Increased</td>
<td valign="top" align="center">Delayed</td>
<td valign="top" align="center">NC</td>
<td valign="top" align="center">Increased</td>
</tr>
<tr>
<td valign="top" align="left"><italic>KfNAC83</italic></td>
<td valign="top" align="center">Enhanced</td>
<td valign="top" align="center">Enhanced</td>
<td valign="top" align="center">150 mM</td>
<td valign="top" align="center">TBD</td>
<td valign="top" align="center">Increased</td>
<td valign="top" align="center">NC</td>
<td valign="top" align="center">Increased</td>
<td valign="top" align="center">Increased</td></tr>
<tr>
<td valign="top" align="left"></td></tr></tbody></table>
<table-wrap-foot>
<attrib><italic>NC - No change, same as WT; TBD - To be determined.</italic></attrib>
</table-wrap-foot>
</table-wrap>
</sec>
<sec><title>Conclusion</title>
<p>The abiotic stress-adaptive features of CAM plants provide a wealth of genetic resources, specifically TFs, that are now available for functional testing and possible improvement of WUE and abiotic stress responses in C<sub>3</sub> photosynthesis plants. Our recent findings strongly suggest that a bioengineering approach using CAM abiotic stress-responsive TFs has the potential to increase abiotic stress tolerance in <italic>A. thaliana</italic> and possibly in C<sub>3</sub> crop plants. Our results indicate that CAM abiotic stress-responsive gene expression can be modulated by the appropriate CAM TFs to generate stress-adaptive phenotypes in <italic>A. thaliana</italic> and likely other C<sub>3</sub> plants because these CAM abiotic stress-responsive genes are apparently conserved and present in C<sub>3</sub> plants (<xref ref-type="bibr" rid="B30">Heyduk et al., 2018</xref>). Furthermore, although <italic>K</italic>. <italic>fedtschenkoi</italic> is distantly related to <italic>A. thaliana</italic>, transgenic <italic>A. thaliana</italic> lines carrying the obligate CAM plants&#x2019; TFs showed favorable features for translational applications. We are optimistic that overexpressing TFs from the inducible CAM halophyte, <italic>M. crystallinum</italic> will have similar favorable responses in <italic>A. thaliana</italic> lines. Co-overexpression of only a small number of obligate and/or inducible CAM plant abiotic stress-responsive TFs with demonstrated abiotic stress-adaptive or -responsive functions would provide a facile approach for bioengineering desirable responses to abiotic stress (<xref ref-type="bibr" rid="B60">Song et al., 2016</xref>). Such an approach could open the door to potentially transformative applications to ensure long-term sustainable food, fiber, feed, and fuel production in a projected hotter and drier landscape in the 21st century and beyond.</p>
</sec>
<sec><title>Author Contributions</title>
<p>BWMW conceived the CAM abiotic stress-responsive TF-based approach to improve C<sub>3</sub> crop plant abiotic stress responses. AA, KR, and BWMW wrote the manuscript. AA, KR, and BW conducted the experiments and provided the CAM plant TF overexpression data. WY, TG, and JC provided the CAM plant TF sequences. All authors reviewed the final manuscript.</p>
</sec>
<sec><title>Conflict of Interest Statement</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
</body>
<back>
<fn-group>
<fn fn-type="financial-disclosure">
<p><bold>Funding.</bold> This work was funded by South Dakota Board of Regents Competitive Research Grant #A18-0015-001 to BWMW and was supported, in part, by the Department of Energy, Office of Science, Genomic Science Program under Award Number DE-SC0008834 to JC.</p>
</fn>
</fn-group>
<ack>
<p>We thank Mary Ann Cushman for her helpful and clarifying comments on the manuscript. We also thank Austin Hacck and Savannah Aanderud for their assistance in maintaining the transgenic lines of <italic>Arabidopsis</italic> plants.</p>
</ack>
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