Abstract
In the era of climate change, the overall productivity of pea (Pisum sativum L.) is being threatened by several abiotic stresses including heat stress (HS). HS causes severe yield losses by adversely affecting several traits in peas. A reduction in pod yield has been reported from 11.1% to 17.5% when mean daily temperature increase from 1.4 to 2.2°C. High-temperature stress (30.5-33°C) especially during reproductive phase is known to drastically reduce both seed yield and germination. HS during germination and early vegetative stage resulted in poor emergence and stunted plant growth along with detrimental effects on physiological functions of the pea plant. To combat HS and continue its life cycle, plants use various defense strategies including heat escape, avoidance or tolerance mechanisms. Ironically, the threshold temperatures for pea plant and its responses are inconsistent and not yet clearly identified. Trait discovery through traditional breeding such as semi leaflessness (afila), upright growing habit, lodging tolerance, lower canopy temperature and small seeded nature has highlighted their utility for greater adaptation under HS in pea. Screening of crop gene pool and landraces for HS tolerance in a targeted environment is a simple approach to identify HS tolerant genotypes. Thus, precise phenotyping using modern phenomics tools could lead to increased breeding efficiency. The NGS (next generation sequencing) data can be associated to find the candidate genes responsible for the HS tolerance in pea. In addition, genomic selection, genome wide association studies (GWAS) and marker assisted selection (MAS) can be used for the development of HS tolerant pea genotypes. Additionally, development of transgenics could be an alternative strategy for the development of HS tolerant pea genotypes. This review comprehensively covers the various aspects of HS tolerance mechanisms in the pea plant, screening protocols, omic advances, and future challenges for the development of HS tolerant genotypes.
1 Introduction
With its domestication history of nearly 10,000 years ago, pea (Pisum sativum L.) is one of the leading annual legumes of the world, cultivated over an area of 7.18 and 2.78 m ha for dry and green seeds, respectively (). It was one of the first genetic model legumes used to learn about basic genetic principles in 1865 (Mendel, 1865). Peas have balance of micro and macro nutrition profile along with high dietary fiber, antioxidants, and numerous important biomolecules, thus have health benefits in managing diabetes, cardio problems, certain cancers, and many degenerative diseases (Kumari and Deka, 2021). Historically, it is a cool season crop, but its area is now extending to warmers regions of the world due to the development of cultivars more resilient to certain abiotic stresses (). It is the fourth important cultivated legume (9.96 m ha) globally, after common beans (Phaseolus vulgaris L.; 33 m ha), cowpeas (Vigna unguiculata L.; 14.4 m ha) and chickpeas (Cicer arietinum L.; 13.7 m ha) (). Despite a substantial increase in area (from 6.9 to 7.2 m ha of dry peas; 1.6 to 2.8 m ha of green peas) and production (from 10.4 to 14.2 m t of dry peas; 12.4 to 21.7 m t of green peas), a slight shift has been recorded in pea productivity (from 1.5 to 2.0 t for dry peas; 7.7 to 7.8 t/ha for green peas) during last two decade viz., from 2001 to 2019 (). Increasing the crop productivity to meet the world’s burgeoning populations food needs, in the presence of various biotic and abiotic stresses has become the major challenge for the crop scientists and producers.
Climate change has shifted the interest of the pea breeders to breed climate resilient high yielding cultivars suitable for varying climatic conditions. Furthermore, crop sensitivity to climate change is broadly contributed by crop responses to temperature, precipitation and rise in atmospheric carbon dioxide (CO2) and its impact on crop productivity (Kaushal et al., 2016; Zhao et al., 2017). Heat stress (HS) has the negative impact on the yield as it is the key environmental factor that regulates the growth and developmental processes. Each plant species has its own maximum, optimum and minimum temperature range for growth and development, known as cardinal temperatures (Wahid et al., 2007) and HS occurs when there is a rise in the soil and air temperature beyond optimum threshold(s) for certain time which causes damage to physiology, growth, development, and yield. HS response has been defined as a complex function of intensity (temperature in degrees), duration of exposure, rate of increase and timing of stress. In general, a transient elevation in temperature, usually 10-15°C above ambient, is considered heat shock or HS to the plants (Wahid et al., 2007). Being adapted to cooler climate, pea requires mean seasonal temperature of 10-18°C for its optimum growth. In addition, peas have a lower HS tolerance than other winter legumes such as chickpea and lentil (Lens culinaris L.) (Kumar et al., 2021), and its productivity usually declines when the maximum day temperature during flowering exceeds 25°C (; Sadras et al., 2013). Moreover, optimum temperature at critical growth stages for pea is key for the realization of higher yield. Contrary to this, adverse temperature could result in deleterious effects on physiological processes including photosynthesis, respiration, reproduction, biomass accumulation and ultimately reduction in the grain yield. Ridge and Pye (1985) reported that each 1°C rise in mean temperature during flowering, may reduce the production by 0.6 t/ha in a number of pea genotypes. In India, a reduction of 0.7 to 0.8 t/ha has been reported (Lamichaney et al., 2021). Hence, there is a need to develop more climate resilient pea genotypes which can perform better under HS conditions.
Many reviews covering various legumes have highlighted the impact of HS including the strategies to breed HS tolerant genotypes as most relevant approach for adaptation to stress (Sita et al., 2017; Liu et al., 2019; Janni et al., 2020; Kumar et al., 2020; Kumar et al., 2021). Although, a few independent studies in pea (Sadras et al., 2013; Jiang et al., 2015; Jiang et al., 2017; Tafesse, 2018; Jiang et al., 2020; Mohapatra et al., 2020; Tafesse et al., 2020; Tafesse et al., 2021; Lamichaney et al., 2021) have demonstrated the negative effects of increased temperature on yield; but they are not comprehensively summarized. Identification of traits controlling any adaptive response of cultivars to HS is an essential step for effective breeding and selection of HS tolerant pea cultivars. This could lead to flexibility in sowing dates and expand its cultivation to new niches. However, in peas, HS tolerance strategies are mostly unclear, especially as it affects many developmental phases of plants when exposed to HS. While most of the information is derived from plants exposed to HS at reproductive phase under controlled environmental conditions, the knowledge under field conditions is limited due to complexities of exposure to stress without confounding effects of other climatic conditions. In this review we have comprehensively summarize the existing knowledge about the impact of HS on different economic traits in Pisum including physiological, biochemical, and molecular mechanisms operating under HS conditions. In addition, we discuss challenges, and breeding strategies for the development of HS resilient pea cultivars using conventional and molecular tools.
2 Impact of HS on peas
In peas, the HS could be sub-categorized into two phases, HS at vegetative stage and HS at reproductive stage. HS at vegetative phase is more challenging for the growers of vegetable peas, who prefers short duration picking types of peas preferably during September-October month of year (with prevailing temperature >30-32°C) in most of Asian countries (Figure 1). However, reproductive phase HS is important for field pea cultivars having longer growing duration wherein flowering usually coincides with higher temperatures during March and April months, especially in the Indian subcontinent. HS at early vegetative or reproductive growth stage decreases all the yield components as hot dry weather interferes with optimum plant growth, pollination and seed setting, thereby reduces the number of pods/plant and pod weight (Mohapatra et al., 2020; Tafesse et al., 2020). Furthermore, reproductive phase is more prone to the HS than the vegetative phase (Prasad et al., 2017; Lamichaney et al., 2021).
Figure 1
2.1 Impact on vegetative stage
The ideal temperature for vegetative growth in peas is 15–20°C (Mahoney, 1991) and the HS consequences are determined by intensity, duration and timing of heat exposure to the plant. HS has a significant impact on germination and vegetative growth of various legumes that includes reduction in shoot growth, root number, root diameter, reduced stomatal conductance and leaf water content, leaf curling, wilting and yellowing (Kaushal et al., 2013; Sita et al., 2017). The details of the HS impact on pea plant especially during vegetative growth phase is summarized in Figure 2. Seeds harvested from different HS conditions like HS-I (moderately late sown; November 30; TMAX=25.9 ± 0.11°C during flowering) and HS-II (very late sown; December 15; TMAX=30.6 ± 0.15°C during flowering) were noted with an average germination reduction of 4-8% in various cultivars (Lamichaney et al., 2021). The maximum impact was observed in late maturing cultivars (maturity >115 days) with germination loss of nearly 16% as compare to early genotypes (maturity <105 days) with nearly 4% loss. Further, Nemeskeri (2004) reported a day/night temperature of 30/30°C hampered the development of primary root in pea. The length of root in the small-seeded pea variety reduced by 69.3% when compared to the control (20/10°C), while a greater decline (73.8%) was recorded in the large-seeded pea varieties. High temperature (HTemp; 30/25°C) known to reduce leaf size and also promote early senescence of pea lower leaves (Munier-Jolain and Carrouée, 2010; ) with detrimental effect on leaf physiological functions (McDonald and Paulsen, 1997). Nodulation of pea plants is known to be adversely affected when pea plants are exposed to 30°C () along with reduction in plant height and biomass (Vijaylaxmi, 2013). Pea germplasm holds lot of phenotypic variation for leaves, canopy types and plant growth habit, thereby emphasis should be placed on identification of these traits that could have significant adaptive response under HS as an early first step to breed cultivars more resilient to HS. Similarly, further validation is also needed on role of root architecture system and canopy colour (pigmentation) under HS. Early and medium maturity group could perform better under HS conditions based on the timing of temperature stress conditions.
Figure 2
2.2 Impact on reproductive traits
HS has adverse effects on flowering and yield-related parameters during the reproductive period in peas (Figure 2). Mild HS (25-30°C) did not cause the abscission of reproductive organs, but it did cause the abortion of organs on higher nodes and does affect the seed filling inside the developing pods due to poor growth (
Jiang et al. (2015) tested pea plant at 36/18°C day/night temperature for 7 days, and reported significant reduction in pollen germination (%), pollen tube length, seed number/pod and seed/ovule ratio over control plants at 24/18°C day/night temperature. Todorova et al. (2016) noted flower drop in peas when exposed to >30°C. Reduction in reproductive stem length, internode length, flowering duration, pod number, pod set ratio and seed yield was also documented under HS in peas (Tafesse, 2018; Jiang et al., 2020). Lamichaney et al. (2021) revealed that on an average 33% of ovules failed to set seeds in peas under late sowing conditions where maximum temperature during reproductive period was about 33°C. Similarly, exposure to 35/18 °C (day/night temperature) resulted in poor ovule and embryo sac expansion (Osorio et al., 2021). Additionally, a reduction in germination percentage was noted in the seeds of plants when exposed to HS (Lamichaney et al., 2021). In other legumes like lentil, day/night temperature at or above 35/20°C caused pod abortion, reduction in flower numbers, pollen viability, germination, stigmatic function, ovular viability, pollen tube elongation and shorter reproductive phase (Sita et al., 2017). Exposure of HTemp (32°C or above) for three or more days could negatively impact reproductive processes specifically on gamete formation and viability, fertilization, and seed setting leading to lower seed numbers in peas.
2.3 Percentage losses
HS causes severe yield losses by adversely affecting several traits in peas. When mean daily temperature was raised by nearly 2.2°C and 1.4°C, reduction has been reported for a number of traits like, water use efficiency (by 30.4% and 26.1%), duration of crop growth (by17 days and 10 days), yield (by 17.5% and 11.1%) and input/output ratio (by 1.20 and 1.11), respectively (Xiao et al., 2009). Similarly, a reduction in plant height (60.2%), total biomass yield (61.7%), seed yield (68.9%) and harvest index (19.3%) has also been observed (Vijaylaxmi, 2013). HS can increase the canopy temperature of pea plant from 24.9°C to 27.8°C which in turn affects other traits like reduction in the reproductive stem length (by 37%), flowering time (by 21%), pod quantity (by 30%), and seed production (by 16%) (Tafesse et al., 2019). The reduction in seed set (%) in HS-I (moderately late sown; November 30; TMAX= 25.9 ± 0.11°C during flowering) and HS-II (very late sown; December 15; TMAX= 30.6 ± 0.15°C during flowering) was recorded as 7-15% in early-maturing genotypes and 6-12% in late-maturing genotypes (Lamichaney et al., 2021). In addition, a reduction in 100-seed weight to the tune of 8-15% in early, and 4-17% in late maturing cultivars were also reported. The seeds harvested from heat stressed plants showed reduced germination (4-8%) over normal harvested plants. Maximum reduction in germination (>15%) was noted in the late maturing cultivars. Larmure and Munier-Jolain (2019) revealed that HTemp in peas decreases the seed-filling duration (by 0.8 day/°C), seed dry-matter and N accumulation rates (by 0.8 and 0.032 mg/seed/day/°C, respectively), and N remobilization from vegetative organs to seeds (by 0.053 mg/seed/day/°C).
3 Impact on physiological, biochemical traits and molecular changes
The physiological, biochemical and molecular changes associated with HS in a number of legumes have been reported (Wahid et al., 2007;
Table 1
| Effects on Different Traits | References |
|---|---|
| Less nitrogen fixation in nodules | |
| Less seeds per pod | Jeuffroy et al., 1990 |
| Poor growth and more synthesis of hsp18.1 and hsp70 transcripts & HSP104 and HSP90 proteins | Srikanthbabu et al., 2002 |
| Less seeds per plant and poor photosynthesis rate | |
| Poor activity of phosphoenolpyruvate carboxylase (PEPC) enzyme | |
| Lower net photosynthesis (Pn) and higher leaf temperature, photorespiration (Pr) | |
| Less chlorophyll a, b and total carotenoid contents and more chlorophyll florescence ratio (F690/F735) | |
| Poor membrane stability index, plant height, total biomass yield, seed yield and harvest index | Vijaylaxmi, 2013 |
| Poor growth and more heat shock protein synthesis (Pshsp22.7, Pshsp22.9 and Pshsp26.2) | Talalaiev and Korduym, 2014 |
| Poor percentage pollen germination, pollen tube length, pod length, seed number/pod, seed/ovule ratio, seed-weight, and size | Jiang et al., 2015; Jiang et al., 2017, Jiang et al., 2020 |
| Decreased leaf pigments content and net photosynthesis rate | Todorova et al., 2016 |
| Less free proline, total phenolics and hydrogen peroxide | Todorova et al., 2016 |
| Poor plant growth and more activities of catalase, superoxide dismutase and guaiacol peroxidase | Todorova et al., 2016 |
| Poor nitrogen fixation in nodules, N assimilate remobilization in plants and seeds | Larmure and Munier-Jolain, 2019 |
| Less leaf chlorophyll a, chlorophyll b, and carotenoid concentrations, plant height, reproductive stem length, internode length, flowering duration, pod number, pod set ratio and seed yield. More canopy temperature (CT), leaf chlorophyll a/b ratio, leaf wax and leaf anthocyanin concentrations | Tafesse, 2018; Tafesse et al., 2019 |
| Less number of pods and seeds/plant | Mohapatra et al., 2020 |
| Poor seed germination, seed setting, seed yield, viability, and 100-seed weight | Lamichaney et al., 2021 |
| More flower drop, shorter reproductive phase, reduced pod filling, abortion of seeds within pods and reduced yield | Susmita et al., 2020 |
Effect of heat stress on key physiological, agronomical, and biochemical traits in Pisum.
3.1 Physiological traits
In peas, HS is known to reduce a number of physiological parameters like net photosynthetic rate (Pn) (
3.2 Biochemical traits: role of ROS and phytohormones
At the cellular level, HS causes membrane protein denaturation, enzyme activation in mitochondria and chloroplasts, changes in membrane permeability and integrity, resulting in reduced ion flux, electrolyte leakage, changes in relative water content (RWC), toxic compound production, and a general disruption of homeostasis that reduces cell viability (Sita et al., 2017; Nijabat et al., 2020). HS impose oxidative stress to plant and provoke higher generation of Reactive Oxygen Species (ROS), including free radicals (O•−2 and OH•) and non-radicals (H2O2 and 1O2) mainly localized in the mitochondria, chloroplast and peroxisomes, with secondary sites in endoplasmic reticulum, cell wall, cell membrane and apoplast (
Phyto-hormones such as auxin, gibberellin (GA) and cytokinin (CK) are positively involve in regulating plant reproductive tolerance under HS (Ozga et al., 2016; Liu et al., 2019). Foliar application of auxins 4-chloroindole-3-acetic acid (4-Cl-IAA) at early reproductive stage of pea can increase the seed yield under HS (
3.3 Synthesis of heat shock protein/factors
Heat shock proteins (HSPs) are evolutionarily conserved chaperones that prevent protein misfolding and denaturation induced by external stresses including HS (Will et al., 2017). First discovered in 1962 (Kregel, 2002), the regulation of HSPs/heat shock factors (HSFs) are known to govern HS tolerance in peas (Shah et al., 2020). Some plants synthesize up to 30-40 HSPs in response to HS (Mansfield and Key, 1987;
4 Screening environments
For breeding of the pea varieties having acquired thermotolerance, there is a need to identify the accurate screening environments and methods. Various controlled environments viz., phytotrons, growth chambers, hydroponics, greenhouses along with natural screening in open field conditions or pots have been used in various crops (Sarsu et al., 2018;
4.1 Screening under field and controlled environments
Under field conditions, the strategy of growing plants with staggered sowing dates in anticipation of receiving HS at different stages has been used in many crops including pea (Jiang et al., 2017; Lamichaney et al., 2021). Simultaneously, such screening protocols are quite challenging due to heat escape or no guaranteed consistent HTemp conditions, interactions factors such as evaporative demand, wind, irrigation status, relative humidity, soil, cultural practices and other interactions and confounding effects. Moreover, field screening needs a thorough characterization of prevailing temperature at different growth stage of plants, preferably with a known thermotolerant check (
Few better HS screening approaches has been developed like screening under phytotron, growth chambers, and greenhouses with the advantage of controlled growth conditions including temperature. However, such facility required huge investments, with insufficient space for screening large populations. Further, standardization of lethal temperature is important in case of controlled screening. Under natural growing conditions, plants get exposed to stress gradually known as induction stress (IS), rather than the severe stress (SS) at lethal temperature. Studies have shown that plants showed greater survival to IS than SS as many stress signaling pathways get triggered with the expression of stress responsive genes in IS (Srikanthbabu et al., 2002). Therefore, it is advisable that before screening of genotypes for thermotolerance, it is better to expose them to IS before their final exposure to SS (
4.2 HS threshold temperature (Tmax) in Pisum
The temperature at which seed germination, seedling and vegetative development, flowering, fruit set, and fruit ripening are seriously affected is referred to as the upper threshold temperature (Wahid et al., 2007). While the sensitivity to HS in peas has been intensively studied and published since early 1950s, still the threshold temperatures (Tmax) for yield reduction have been inconsistently reported. Various researchers have suggested different temperature range beyond which peas yield is reduced significantly. Lambert and Linck (1958) considered a temperature of 32°C is much more detrimental in yield reduction of peas than 27°C and 29°C. Nonnecke et al. (1971) reported continued exposure at 27/17°C (day/night temperature) resulting in significant yield loss. Jiang et al. (2015) indicated 36°C as the critical temperature for a significant reduction in pollen germination and pollen tube length. He explained that the actual threshold temperature for HS in field is hard to deduce and interpret, because irrigation increases the threshold by several degrees. Similarly, a few other studies suggested 25.6°C (Pumphrey and Ramig, 1990), 31°C (Jeuffroy et al., 1990), 25°C (Sadras et al., 2013) and 28°C (
5 Traditional breeding for HS in Pisum
5.1 Harnessing crop germplasm repertoire
Screening of crop gene pool and landraces for yield and HS tolerance in a targeted environment is a simple approach to identify HS tolerant genotypes in peas (Table 2), with considerable genetic variations within cultivated types. Further, crops wild species have been successfully utilized in pre-breeding program for development of HS in various crops such as rice (Oryza sativa L.) (Mammadov et al., 2018), pigeon pea (Cajanus cajan L.) (Ramakrishna et al., 2021) and wheat (Triticum aestivum L.) (
Table 2
| Genotypes | Screening Method | Stage | Responsive Traits/Parameters | Types | Country | Reference |
|---|---|---|---|---|---|---|
| Acc.623 and Acc.765 | TIR | Vegetative stage | Recovery growth, Enhances expression of hsps | Pulse type | India | Srikanthbabu et al., 2002 |
| PFD 99-7, IPFD 3-17, IPFD 2-6, IPFD 1-10, HUDP 16 and DPR 13 | Field trials | Reproductive stage | Membrane stability index at podding, plant height, biological yield, seed yield and harvest index | Pulse type | India | Vijaylaxmi, 2013 |
| Arka Uttam, Arka Apoorva, IIHR 544, IIHR 13-1, IIHR 680, PMR 37, Swarna Mukti, KTP 4 and VRPMR 11 | TIR | Vegetative stage | Recovery growth | Vegetable type | India | Verma et al., 2019 |
| JP-625, IARI-2877, PMR-38 II, EC318760, EC-328758 and IARI-2904 | Polyhouse | Reproductive stage | Pod setting, pods/plant, seeds/plant, seed size and weight | Pulse type | India | Mohapatra et al., 2020 |
| 40-10, Naparnyk and CDC Meadow | Growth chamber and Field trials | Reproductive stage | Ovules and seeds/pod | Pulse type | Canada | Jiang et al., 2020 |
| Arka Uttam, Arka Chaitra, and Arka Tapas, Magadi local* (Land race) | Field trials | Reproductive stage | Pod weight, pods/plant, seed/pod, and yield | Vegetable type | India | Susmita et al., 2020 |
List of pea genotypes identified for heat tolerant and their associated traits.
TIR, temperature induction response; * Magadi Local: heat tolerant land race reported from southern India.
5.2 Identification of traits associated with HS adaptation in Pisum
Proper screening methods and identification of most responsive traits that adapt better to elevated temperature are key component of breeding for HS tolerance. Mohapatra et al. (2020) reported that pods/plant in HS tolerant genotypes vary from 15-45; seeds/plant from 35-197; 25 seed-weight from 3.5 to 6.7 g and seed diameter from 53-80 mm. A highly positive correlation between number of seeds/plant with number of pods/plant; seed diameter and seed-weight, whereas negative correlation between seed-weight and pods/plant in the heat tolerant pea genotypes were identified under HS conditions. Further allocation of photosynthetic products to enhance seed weight resulted in reduced number of pods and seeds/plant among heat tolerant pea genotypes. Importance of canopy based traits in heat adaption, adding that pea cultivars with the semi leafless type (carrying Afila gene), upright growing nature, resistance to lodging were better adapted to heat stressed environments than cultivars with the normal leaf and vining habit. Such cultivars are characterized by less surface area and lower transpirational water loss (Tafesse, 2018; Tafesse et al., 2019).
In addition, they could maintain cooler canopy temperature through upright growth. Although semi-leafless plant types have been identified as excellent genotype for improved production and lodging resistance in peas (Singh and Srivastava, 2015). But, Mohapatra et al. (2020) observed that this may and may not be absolutely true, as some of the semi-leafless genotypes (e.g. VL-40, KPMR-615, DDR-61, KPMR-557) were grouped under heat susceptible category while others in heat tolerant category (e.g. HUDP-25, IPF-400, HFP-4, DDR-56). Further, late flower termination and high pod number/plant were found promising and helpful indices for high yield potential under warmer environments (
6 Genomics for HS in Pisum
6.1 QTL mapping for HS traits
Pisum being a model plant, used extensively at phenotypic and molecular level and its genome sequence got released in 2019 (Kreplak et al., 2019). However, very little progress has been made in term of underlying molecular mechanism (at genomic level) for HS in peas as compared to other winter season legumes like chickpeas and lentil. Tafesse et al. (2020) evaluated 135 accessions of peas in five environments for 10 HS responsive traits using GWAS (Genome Wide Association Studies) and identified 32 associated markers and 48 candidates genes for heat tolerance in pea (Table 3). Similarly, in the same GWAS population QTLs related to heat and drought stresses were identified for traits like lamina wax, petiole wax, stem thickness, flowering duration, normalized difference vegetation index (NDVI) and normalized pigment and chlorophyll index (NPCI) (Tafesse et al., 2021). QTL (quantitative trait loci) mapping to HS tolerance have been done in other legume crops such as chickpea (Paul et al., 2018). Similarly, in cowpea, QTLs for pod number per peduncle and two genes for HS tolerance were mapped (Lucas et al., 2013; Pottorff et al., 2014). Even though pea is an important crop, only limited studies have been conducted to identify genomic regions associated with HS tolerance, therefore more efforts are required to use the available molecular resources for conducting the mapping and tagging of genes.
Table 3
| Traits | Loci (No.) | Genomic location | Variance explained (PVE%) | Gene ID | Reference |
|---|---|---|---|---|---|
| SPAD value/Chlorophyll concentration | 06 | LGIII | 7-13 | Psat5g221440, Psat5g224400, Psat5g224360, Psat5g224280, Psat5g299080, Psat5g299040, Psat5g301440, Psat5g301400, Psat5g303880, Psat5g303840, Psat5g303800 and Psat5g303760 | Tafesse et al., 2020 |
| Photochemical reflectance index | 02 | LGII and LGVII | 9 | Psat6g234040, Psat6g234000 and Psat7g148080 | Tafesse et al., 2020 |
| Canopy temperature | 02 | LGIII and LGIV, | 6 | Psat4g203800, Psat4g203760, Psat5g169800 and Psat5g169760 | Tafesse et al., 2020 |
| Reproductive stem length | 07 | LGV LGIV LGIII and LGVII | 4-6 | Psat3g006600, Psat3g006560, Psat4g020520, Psat5g299080, Psat5g299040, Psat5g303680, Psat7g013080, Psat7g013040, Psat7g015240, Psat7g015200, Psat7g015160, Psat7g057080 and Psat7g057040 | Tafesse et al., 2020 |
| Pod number | 09 | LGI, LGV, LGIII and one locus on non‐chromosomal scaffold | 7-10 | Psat2g060680, Psat2g144160, Psat2g155280, Psat2g157440, Psat2g166600, Psat2g166560, Psat2g166520, Psat2g005000, Psat2g004960, Psat3g111000, Psat3g110960 and Psat5g270480 | Tafesse et al., 2020 |
| Internode length | 06 | LGIV LGIII LGII and LGVII | 6-7 | Psat4g039600, Psat4g047680, Psat4g047640, Psat4g047600, Psat5g299080, Psat5g299040, Psat6g211160, Psat7g120120 | Tafesse et al., 2020 |
| Lamina Wax | 04 | LGVI LGIV LGII and LG7 | – | Psat1g139360, Psat4g112480 and Psat7g076840 | Tafesse et al., 2021 |
| Petiole Wax | 03 | LGIV LGVII Uscaffold03717_87257 | – | Psat4g011120, Psat7g186040, Psat0s3717 g0080 | Tafesse et al., 2021 |
| Stem thickness | 03 | LGVII LGII and Uscaffold03985_59708 | – | Psat7g071920, Psat7g072040, Psat7g208760, Psat0s3985 g0040 | Tafesse et al., 2021 |
| Flowering duration | 02 | LGV and LGIII | – | Psat3g006600, Psat5g140600 | Tafesse et al., 2021 |
| Normalized difference vegetation index (NDVI) | 01 | LGII | – | Psat6g028080, Psat6g028120 | Tafesse et al., 2021 |
| Normalized pigment and chlorophyll index (NPCI) | 02 | LGIII and LGII | – | Psat5g299040, Psat6g231000 | Tafesse et al., 2021 |
QTLs discovery of heat responsive traits with their genomic locations and candidate genes in Pisum.
Many reports have identified the most responsive traits for HS, and genomic locations/genes responsible for these traits through number of linkage studies (Jiang et al., 2020; Mohapatra et al., 2020; Tafesse et al., 2020; Lamichaney et al., 2021) under normal growing conditions viz., plant height (Irzykowska and Wolko, 2002; Tar’an et al., 2003;
6.2 Candidate genes and transcription factors for HS
The huge data generated through NGS (next generation sequencing) can be associated to the putative candidate genes responsible for the HS tolerance in pea. RNA sequencing has been done in many legumes for understanding the genetic factors governing HS related traits. In pea, based on the gene ontology several candidate genes have been identified that could be associated with the HS tolerance (Tafesse et al., 2020; Tafesse et al., 2021). The constitutively expressed and tissue specific genes are summarized in Tables 3 and 4. The functional annotation of these genes will benefit to understand their role in HS tolerance. The transcriptome profiling of a heat tolerant line ‘PR11-2’ and ‘CDC Amarillo’ was conducted under HS at 38°C for 3 h and from the heat stressed anthers and stipules they could identify 588 and 879 differentially expressed genes (DEGs), respectively (
Table 4
| Trait | Gene ID | Protein Name | Gene Ontology | Reference |
|---|---|---|---|---|
| Chlorophyll index (SPAD value) | Psat5g221440 | Amidohydrolase like protein | Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | Tafesse et al., 2020 |
| Psat5g224400 | Cysteine-rich receptor-like protein kinase 25 | Integral component of membrane; ATP binding; protein kinase activity | ||
| Psat5g224360 Psat5g224280 | Pentatricopeptide repeat-containing protein at1g11290-like protein | Zinc ion binding | ||
| Psat5g299080 | Kinesin-related protein 4-like | – | ||
| Psat5g299040 | PPR containing plant-like protein (Putative tetratricopeptide-like helical domain-containing protein) | – | ||
| Psat5g301440 | Embryo-specific 3 | – | ||
| Psat5g301400 | Nuclear pore protein | Membrane; nuclear pore; structural constituent of nuclear pore; mRNA transport; protein transport | ||
| Psat5g303880 | Putative sterile alpha motif/pointed domain-containing protein (SAM domain protein) | Negative regulation of transcription, DNA-templated | ||
| Psat5g303840 | Gamma-glutamylcyclotransferase At3g02910 | Gamma-glutamylaminecyclotransferase activity. transferase activity | ||
| Psat5g303800 | Nuclear fusion defective 4 | Integral component of membrane | ||
| Photochemical reflective index | Psat6g234040 | Putative GTP 3, 8-cyclase | Mo-molybdopterin cofactor biosynthetic process | |
| Psat6g234000 | Riboflavin biosynthesis protein ribF | FMN adenylyltransferase activity; riboflavin biosynthetic process | Tafesse et al., 2020 | |
| Psat7g148080 | TATA-binding-like protein | ATP binding | ||
| Canopy temperature | Psat4g203800 | Ethylene-responsive transcription factor-like protein At4g13040 | Nucleus; DNA binding; DNA-binding transcription factor activity | Tafesse et al., 2020 |
| Psat5g169800 | ABC transporter C family member 3-like isoform X1 | Integral component of membrane; ATP binding; ATPase activity, coupled to transmembrane movement of substances | ||
| Psat5g169760 | Retrovirus-related Pol polyprotein from transposon TNT 1-94 | Retrotransposon nucleocapsid; nucleic acid binding; DNA integration | ||
| Reproductive stem length | Psat3g006600 | Uncharacterized protein LOC101515092 | Integral component of membrane | Tafesse et al., 2020 |
| Psat3g006560 | L-allo-threonine aldolase-like protein (Putative aldehyde-lyase) | Lyase activity; cellular amino acid metabolic process | ||
| Psat4g020520 | Alkaline-phosphatase-like protein (Putative Type I phosphodiesterase/nucleotidepyrophosphatase/phosphate transferase) | Integral component of membrane; mannose-ethanolamine phosphotransferase activity; GPI anchor biosynthetic process | ||
| Psat5g299080 | Kinesin-related protein 4-like | – | ||
| Psat5g299040 | PPR containing plant-like protein (Putative tetratricopeptide-like helical domain-containing protein) | – | ||
| Psat5g303680 | Putative sterile alpha motif/pointed domain-containing protein (SAM domain protein) | – | ||
| Psat7g013080 | aldehyde dehydrogenase family 2-member C4-like | Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor | ||
| Psat7g013040 | Cst complex subunit ctc1-like protein | Telomere maintenance | ||
| Psat7g015240 | Ribosomal L7Ae/L30e/S12e/Gadd45 family protein | – | ||
| Psat7g015200 | Tesmin/TSO1-like CXC domain protein | – | ||
| Psat7g057080; Psat7g057040 | tRNA (Cytosine (34)-C (5)) methyltransferase-like protein | RNA binding; tRNA (cytosine-5-) methyltransferase activity | ||
| Internodal length | Psat4g039600 | Eukaryotic translation initiation factor 3 subunit C (eIF3c) (Eukaryotic translation initiation factor 3 subunit 8) (eIF3 p110) | Eukaryotic 43S preinitiation complex; eukaryotic 48S preinitiation complex; eukaryotic translation initiation factor 3 complex; translation initiation factor activity; translation initiation factor binding; formation of cytoplasmic translation initiation complex | Tafesse et al., 2020 |
| Psat4g047640 | Ras GTPase-activating protein-binding protein 1-like | RNA binding | ||
| Psat5g299080 | Kinesin-related protein 4-like | – | ||
| Psat5g299040 | PPR containing plant-like protein (Putative tetratricopeptide-like helical domain-containing protein) | – | ||
| Psat6g211160 | Transmembrane amino acid transporter family protein | Integral component of membrane | ||
| Pod number | Psat2g144160 | Pectin acetylesterase | Cell wall; extracellular region; integral component of membrane; hydrolase activity; cell wall organization | Tafesse et al., 2020 |
| Psat2g155280 | 60S ribosomal protein l8-like | ribosome; structural constituent of ribosome; translation | ||
| Psat2g157440 | Putative ATPase, AAA-type, core, AAA-type ATPase domain-containing protein (p-loop nucleoside triphosphate hydrolase superfamily protein) | ATP binding; hydrolase activity | ||
| Psat2g166600 | Probable serine/threonine-protein kinase At1g01540 isoform X1 | Integral component of membrane; ATP binding; protein kinase activity | ||
| Psat2g166560 | PI-PLC X domain-containing protein At5g67130 | Phosphoric diester hydrolase activity; lipid metabolic process | ||
| Psat2g005000 | Nup133/Nup155-like nucleoporin | Structural constituent of nuclear pore | ||
| Psat2g004960 | Cation-transporting ATPase plant (Putative calcium-transporting ATPase) | Integral component of membrane; nucleotide binding | ||
| Psat3g111000 | Phosphomannomutase | Cytoplasm; phosphomannomutase activity; GDP-mannose biosynthetic process | ||
| Psat3g110960 | bifunctional protein FolD 4, chloroplastic | Methylenetetrahydrofolate dehydrogenase (NADP | ||
| Psat5g270480 | Heat shock protein 70 (HSP70)-interacting protein, putative | – | ||
| Lamina wax | Psat1g139360 | Hydrolase activity + hydrolysing O-glycosyl compounds | – | Tafesse et al., 2021 |
| Psat4g112480 | Arp2/3 complex + 34 kD subunit p34-Arc | Actin filament binding; structural constituent of cytoskeleton | ||
| Psat7g076840 | NnrU protein | Isomerase activity | ||
| Petiole wax | Psat4g011120 | Aminotransferase class-III | Adenosylmethionine8-amino-7oxononanoate transaminase activity; dethiobiotin synthase activity; pyridoxal phosphate binding | Tafesse et al., 2021 |
| Psat7g186040 | Pyridine nucleotide disulphide oxidoreductase | Oxidoreductase activity | ||
| Stem thickness | Psat0s3985g0040 | Myb/SANT-like DNA-binding domain | – | Tafesse et al., 2021 |
| Flowering duration | Psat5g140600 | SWIB/MDM2 domain | – | Tafesse et al., 2021 |
| Normalized difference vegetation index (NDVI) | Psat6g028080 | PB1 domain | Calcium ion binding | Tafesse et al., 2021 |
| Psat6g028120 | Protein kinase domain | ATP binding; protein serine/threonine kinase activity | ||
| Normalized pigment and chlorophyll index (NPCI) | Psat5g299040 | PPR repeat family | ||
| Psat6g231000 | Dual specificity phosphatase + catalytic domain | Protein tyrosine/serine/threonine phosphatase activity | Tafesse et al., 2021 |
The candidate genes identified in pea under the heat stress conditions.
In cowpea cDNA-AFLP (complementary DNA-amplified fragment length polymorphism) was used to understand the expression of various thermo- tolerant genes (Simões-Araújo et al., 2002). HSFs were studied in legumes like soybean and Medicago (Kotak et al., 2007). In soybean, the role of HSP20 and GmHsfA1in relation to HS have been evaluated (
In pea the gene discovery is limited to finding of HSP genes. Among the different HSP genes reported in pea, the expression of PsHSP18.1 and PsHSP71.2 genes appeared to be heat inducible (
6.3 Genetic engineering for achieving HS
Breeding transgenics is an alternate strategy for the development of HS tolerant cultivars in pea. The low variation for HS tolerance in pea can be addressed through introgression of foreign gene from related or unrelated organism by genetic engineering. Till date, only one study is known for the development of transgenics in pea. However, success in development of transgenics for HS tolerance has been demonstrated in wheat, rice, maize and other crops (
Due to regulatory hurdles the transgenic breeding approaches has not been widely used. Under such a scenario the CRISPR/Cas9 technology is gaining traction in crop breeding and genetic improvement of many targeted traits including abiotic stress tolerance in many crop species (Li et al., 2022a). However, there is limited research on peas and other legumes which need attention. Recently, Agrobacterium mediated transformation system of hairy roots was developed and gene phytoene desaturase (PsPDS) causing albinism was edited in pea (Li et al., 2022b).
7 Breeding approaches
Different breeding methods that can be used in pea to improve the HS tolerance, the option includes germplasm selection, pure line selection, pedigree breeding and backcross breeding. As a general rule, all breeding methods suitable for breeding of self-pollinated crops are equally applicable to peas. The highly self-pollinated nature of pea facilitates the easy development of pure lines that can be established through identifying genetic resources with heat tolerant attributes. While screening, distinction must be made between thermotolerance nature vs growth potential, as plant with more growth, in general, grow better in wide environmental conditions (Wahid et al., 2007). Further, the developed pure lines can be used in breeding programs such as pedigree breeding, back cross breeding, and recurrent selection. The developed pure line can also be used to map QTL(s) associated with the complex traits such as HS and yield in the HS during vegetative and reproductive stages. These pure lines can also be used to study the inheritance of the HS tolerance trait and for crop improvement by combining with other traits of interest. At HS, the breeding method can be designed to select for a higher number of flower production and pod setting. Efficient selection technique during the breeding program is crucial for identification of HS tolerant parental lines, inheritance studies and utilization through breeding programs.
The direct selection for traits such as photosynthetic rate and reproductive fitness can be one of the ways for identification of HS tolerant genotypes (Prasad et al., 2008); for example, during cowpea breeding for HS tolerance the selection was done for genotypes with abundant flower and pod production (Marfo and Hall, 1992), resulting in the development of HS tolerant cowpea variety California Blackeye 27 (CB27) (
8 Way forward
8.1 Appropriate screening methodology
HS tolerance can be improved through conventional as well as genomic approaches (Figure 3). However, these approaches are time consuming and expensive (Khan et al., 2020). Further, varied maturity groups in peas (early, mid, and late) and end use grouping (vegetable types and pulse types), complicates the screening process. As stated, HS at vegetative stage is important in peas when cultivars are being bred for September and October maturity (extra early) groups under Asian conditions. On contrary, breeding vegetable peas for late sown conditions (during March and April) or for pulse type, the HS is mostly experienced at the reproductive phase. Moreover, early flowering genotypes escape HS due to their early maturity. For robust screening, long HS imposition must be followed by screening the genotypes for HS tolerance from seedling to maturity or exposing plant at specific growth stages depending upon the local or regional environmental conditions based on when HS occurs under field conditions. Use of phenomics tools is important to screen the large set germplasm with more precision to evaluate the complex adaptive traits such as plant architecture, physiological traits and other quantitative parameters (Pratap et al., 2019). Further, there is a need to incorporate physiological screening protocols rather than over emphasizing on the yield and agronomical traits, as these show proximity with the markers with considerable level of variability and heritability. Some such traits include selection based upon pollen viability, canopy temperature depression (CTD), electrolyte leakage, membrane stability, chlorophyll fluorescence or photosynthetic function and green leaf area duration.
8.2 Trait discovery, genetics, and molecular breeding
Identification of traits in peas controlling any adaptive response of cultivars to HS is an important first step for the effective breeding for the HS tolerant cultivars. In past, most of the HS related studies in peas were focused on the reproductive stages (
8.3 Managing and regulating stress as short-term strategy
Since the well-established breeding strategies for HS tolerance is time consuming and costly; thus, the growing environment can be modified for short term gains through use of plant growth regulators, biofertilizers, irrigation management, and nutrient management as reported in other crops. Further, growing short-duration cultivars and altering the planting date before the onset of HS during critical growth stages of the crop might be advantageous. It is one of the practices done by few vegetables growers from Indo-Gangetic regions of India (Varanasi), who grows short duration varieties like Kashi Udai and Kashi Nandini, sowing is done by Mid-January and picking is ready by mid of March (60-65 days) before the onset of HTemp.
8.4 Use of plant growth regulators and biofertilizers
The endogenous plant defense system can be boosted through the use of plant growth regulating chemicals such as polyamines having free radicle scavenging features and antioxidant activities (
8.5 Alleviation of HS by nutrient management
Better plant nutrition can successfully mitigate an array of adverse effects of HTemp stress. The use of macronutrients such as K, Ca and micronutrients such as B, Se and Mn under HS can help to activate the metabolic and biological processes that help to maintain the high water potential of tissues and therefore increase the HS tolerance (Waraich et al., 2012). The application of plant nutrient like N, K, Ca, and Mg has also been found to reduce toxicity to ROS by increased the amount of antioxidant enzymes such as superoxide dismutase (SOD). However, there is a paucity of information dedicated to the nutritional dynamics, specifically, on micronutrient-use efficiency under climatic changes, which influences crop nutrient absorption, transport, and remobilization in Pisum. More studies should be done aiming to understand the nutritional dynamics of peas under HS conditions.
9 Conclusions
Peas being cool season crop have a narrow window of its cultivation. There is high demand for the varieties which can be successfully cultivated in the non-traditional areas to increase in overall area, cultivation, and production. Its cultivation and area expansion are challenged by the projected rise in temperatures both seasonal means and occurrence of extreme temperature events. Though, a few reports of heat tolerant pea genotypes are available, yet identification of more HS tolerant genotypes through controlled and field studies are needed. In addition, this should be well integrated with high-throughput phenotyping platforms available in various pea cultivating countries. Prolong HS imposition from seedling to maturity or at specific growth stages based on the occurrence in the region need to be followed while screening the material for HS tolerance. This should be integrated with the physiological based interventions and germplasm characterization for yield. The pea ideotype for warmer regions must carry certain traits such as, semi leaflessness with upright growing habit, lodging tolerance, more reproductive nodes, pods/plant, ovules/pod, increased seed numbers and higher 1000 seed-weight (Figure 3). Physiologically, the pea genotypes should have high growth rate, higher gamete (pollen and ovule) viability, seed-set, photosynthetic activity, improved transpiration rate, low canopy temperature depression (CTD), and less membrane damage.
Figure 3

Breeding for heat stress tolerance in Pisum; The phenotypic performance of cultivars under heat stress is determined by Genotype × Environment × Management Model. Ideotype breeding for HS includes combination of Agro-morphological and physiological traits.
Plant genetic architecture and correlation of these traits needs to be established to understand their differential response under HS. Further, as plant phenotype is known to be influenced by genotype, environment and genotypic × environmental interactions. In addition, cultural management practices (M) are often included as third separate factor for better crop yield, leading to need to understand the G× E ×M interactions and models (
Statements
Author contributions
Conceptualization, JD, VS, and GM; writing original draft and resources, JD, VS, GM, PJ, NG, RD, PS, TB, and PP. All authors contributed to the article and approved the submitted version.
Funding
This research received no external funding. Contribution number 23-118-J from the Kansas Agricultural Experiment Station.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Publisher’s note
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Summary
Keywords
heat stress, Pisum, heat shock proteins (HSPs), threshold temperature, QTLs, breeding
Citation
Devi J, Sagar V, Mishra GP, Jha PK, Gupta N, Dubey RK, Singh PM, Behera TK and Prasad PVV (2023) Heat stress tolerance in peas (Pisum sativum L.): Current status and way forward. Front. Plant Sci. 13:1108276. doi: 10.3389/fpls.2022.1108276
Received
25 November 2022
Accepted
28 December 2022
Published
17 January 2023
Volume
13 - 2022
Edited by
Padma Nimmakayala, West Virginia State University, United States
Reviewed by
Chandra Obul Reddy Puli, Yogi Vemana University, India; Prasad Parchuri, Washington State University, United States; Radha Sivarajan Sajeevan, Swedish University of Agricultural Sciences, Sweden
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Copyright
© 2023 Devi, Sagar, Mishra, Jha, Gupta, Dubey, Singh, Behera and Prasad.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Jyoti Devi, Jyoti.devi@icar.gov.in; P.V. Vara Prasad, vara@ksu.edu
This article was submitted to Plant Abiotic Stress, a section of the journal Frontiers in Plant Science
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