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<front>
<journal-meta>
<journal-id journal-id-type="publisher-id">Front. Plant Sci.</journal-id>
<journal-title>Frontiers in Plant Science</journal-title>
<abbrev-journal-title abbrev-type="pubmed">Front. Plant Sci.</abbrev-journal-title>
<issn pub-type="epub">1664-462X</issn>
<publisher>
<publisher-name>Frontiers Media S.A.</publisher-name>
</publisher>
</journal-meta>
<article-meta>
<article-id pub-id-type="doi">10.3389/fpls.2023.1165461</article-id>
<article-categories>
<subj-group subj-group-type="heading">
<subject>Plant Science</subject>
<subj-group>
<subject>Editorial</subject>
</subj-group>
</subj-group>
</article-categories>
<title-group>
<article-title>Editorial: Genetic improvement of <italic>Triticeae</italic> crops based on high-throughput phenotyping: Molecular design for yield, resistance and tolerance</article-title>
</title-group>
<contrib-group>
<contrib contrib-type="author">
<name>
<surname>Fan</surname>
<given-names>Xiaoli</given-names>
</name>
<xref ref-type="aff" rid="aff1">
<sup>1</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/639045"/>
</contrib>
<contrib contrib-type="author" corresp="yes">
<name>
<surname>Ma</surname>
<given-names>Pengtao</given-names>
</name>
<xref ref-type="aff" rid="aff2">
<sup>2</sup>
</xref>
<xref ref-type="author-notes" rid="fn001">
<sup>*</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/319396"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Cui</surname>
<given-names>Fa</given-names>
</name>
<xref ref-type="aff" rid="aff3">
<sup>3</sup>
</xref>
<uri xlink:href="https://loop.frontiersin.org/people/63644"/>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Xu</surname>
<given-names>Yunfeng</given-names>
</name>
<xref ref-type="aff" rid="aff4">
<sup>4</sup>
</xref>
</contrib>
<contrib contrib-type="author">
<name>
<surname>Liu</surname>
<given-names>Shuyu</given-names>
</name>
<xref ref-type="aff" rid="aff5">
<sup>5</sup>
</xref>
</contrib>
</contrib-group>
<aff id="aff1">
<sup>1</sup>
<institution>Chengdu Institute of Biology, Chinese Academy of Sciences</institution>, <addr-line>Chengdu</addr-line>, <country>China</country>
</aff>
<aff id="aff2">
<sup>2</sup>
<institution>School of Life Sciences, Yantai University</institution>, <addr-line>Yantai, Shandong</addr-line>, <country>China</country>
</aff>
<aff id="aff3">
<sup>3</sup>
<institution>School of Agriculture, Ludong University/Key Laboratory of Molecular Module-Based Breeding of High Yield and Abiotic Resistant Plants in Universities of Shandong</institution>, <addr-line>Yantai</addr-line>, <country>China</country>
</aff>
<aff id="aff4">
<sup>4</sup>
<institution>Agricultural Genomics Institute at Shenzhen (AGIS), Chinese Academy of Agricultural Sciences (CAAS)</institution>, <addr-line>Shenzhen</addr-line>, <country>China</country>
</aff>
<aff id="aff5">
<sup>5</sup>
<institution>Texas A&amp;M AgriLife Research, Texas A&amp;M University System</institution>, <addr-line>Amarillo, TX</addr-line>, <country>United States</country>
</aff>
<author-notes>
<fn fn-type="edited-by">
<p>Edited and Reviewed by: Nunzio D&#x2019;Agostino, University of Naples Federico II, Italy</p>
</fn>
<fn fn-type="corresp" id="fn001">
<p>*Correspondence: Pengtao Ma, <email xlink:href="mailto:ptma@ytu.edu.cn">ptma@ytu.edu.cn</email>
</p>
</fn>
<fn fn-type="other" id="fn002">
<p>This article was submitted to Plant Bioinformatics, a section of the journal Frontiers in Plant Science</p>
</fn>
</author-notes>
<pub-date pub-type="epub">
<day>09</day>
<month>03</month>
<year>2023</year>
</pub-date>
<pub-date pub-type="collection">
<year>2023</year>
</pub-date>
<volume>14</volume>
<elocation-id>1165461</elocation-id>
<history>
<date date-type="received">
<day>14</day>
<month>02</month>
<year>2023</year>
</date>
<date date-type="accepted">
<day>03</day>
<month>03</month>
<year>2023</year>
</date>
</history>
<permissions>
<copyright-statement>Copyright &#xa9; 2023 Fan, Ma, Cui, Xu and Liu</copyright-statement>
<copyright-year>2023</copyright-year>
<copyright-holder>Fan, Ma, Cui, Xu and Liu</copyright-holder>
<license xlink:href="http://creativecommons.org/licenses/by/4.0/">
<p>This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.</p>
</license>
</permissions>
<related-article id="RA1" related-article-type="commentary-article" xlink:href="https://www.frontiersin.org/research-topics/31138" ext-link-type="uri">Editorial on the Research Topic <article-title>Genetic improvement of <italic>Triticeae</italic> crops based on high-throughput phenotyping: Molecular design for yield, resistance and tolerance</article-title>
</related-article>
<kwd-group>
<kwd>molecular design</kwd>
<kwd>high-throughput phenotyping</kwd>
<kwd>stress tolerance</kwd>
<kwd>yield</kwd>
<kwd>
<italic>Triticeae</italic> crops</kwd>
</kwd-group>
<counts>
<fig-count count="0"/>
<table-count count="0"/>
<equation-count count="0"/>
<ref-count count="2"/>
<page-count count="3"/>
<word-count count="1031"/>
</counts>
</article-meta>
</front>
<body>
<sec id="s1" sec-type="intro">
<title>Introduction</title>
<p>
<italic>Triticeae</italic> are the foremost staple foods worldwide and also the most widely cultivated crops. Their resistance to biotic and abiotic stresses is always important during genetic improvement and thus greatly influences their adaptability and cultivation ranges. However, still-evolving pathogens and pests, harsh weather, reduced resources, etc., all threaten sustainable crop production, making resistance and tolerance improvement the most important concerns in current <italic>Triticeae</italic> breeding programs. Meanwhile, with the global population increasing, crop production is facing great growth challenges to meet food security demands, further emphasizing the importance of overcoming these adverse conditions that jeopardize crop production. Fortunately, in recent years, with the accelerated progress of omics research, resistance/tolerance-related genes have been rapidly discovered, and associated diagnostic single nucleotide polymorphisms have been effectively developed, making the application of germplasm resources for molecular design breeding more efficiently, and providing sustainable sources of resistance and yield improvement for <italic>Triticeae</italic> crops to ensure future food security.</p>
<p>In relation to this topic, a total of 140 authors contributed their recent advances in disease resistance, stress tolerance and yield performance studies on <italic>Triticeae</italic> crops, which are presented in 13 research articles.</p>
</sec>
<sec id="s2">
<title>Biotic stress response in <italic>Triticeae</italic> crops</title>
<p>Powdery mildew, a globally epidemic disease in <italic>Triticeae</italic> crops caused by the biotrophic fungus <italic>Blumeria graminis</italic> f. sp. <italic>tritici</italic> (<italic>Bgt</italic>), can severely affect yield and quality. Even though more than 100 powdery mildew (<italic>Pm</italic>) genes/alleles have been found in <italic>Triticeae</italic> crops, only a few of them have been applied in wheat improvement (<xref ref-type="bibr" rid="B2">Han et&#xa0;al., 2022</xref>). These crops are facing strong selection pressure, and continual identification and utilization of <italic>Pm</italic> genes/alleles from various germplasm resources are needed for rational deployment. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.943669">Li et&#xa0;al.</ext-link> reported a novel <italic>Pm</italic> gene, <italic>PmSN0293</italic>, on wheat chromosome 6A, putatively from <italic>Thinopyrum ponticum</italic>, and developed two wheat&#x2013;<italic>Th. ponticum</italic> introgression lines carrying this new <italic>PmSN0293</italic> and the previously reported <italic>Pm2</italic> and <italic>Pm52</italic>, which exhibited excellent application potential in wheat breeding programs. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.1048252">Jin et&#xa0;al</ext-link>. identified a new splicing variant of Pm4, PmYAV, in synthetic hexaploid wheat, which was developed by hybridization of diploid Aegilops and tetraploid wheat, and four molecular markers available for marker-assisted selection (MAS) were screened. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.1042399">Liu et&#xa0;al.</ext-link> identified a major quantitative trait locus (QTL) <italic>QPm.cas-7D</italic> for adult plant resistance to wheat powdery mildew in a well-known wheat&#x2013;<italic>Agropyron cristatum</italic> introgression line, PuBing3228. It was subsequently deduced that QPm.cas-7D was Pm38 and that a 3-bp InDel between resistant and susceptible haplotypes was responsible for the resistance. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.918559">Qiu et&#xa0;al.</ext-link> identified a resistant haplotype carrying the Pm locus, PmH962, which was confirmed to be the reported Pm5e and had no negative effect on wheat agronomic performance.</p>
<p>In addition to powdery mildew, resistance to other destructive diseases, such as leaf rust and stem rust, were also presented. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.1054673">Zhang et&#xa0;al.</ext-link> applied 112 wheat accessions introduced from the U.S. National Plant Germplasm System to evaluate resistance to the Chinese predominant races causing leaf rust and their resistance genes in order to explore more effective resistance resources for overcoming wheat leaf rust. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.895480">Kataria and Kaundal</ext-link> performed a comparative analysis of protein-protein interactions (PPIs) between two pathogen races, <italic>Pgt</italic> 21-0 and <italic>Pgt</italic> Ug99, both causing wheat stem rust, and elucidated the functional differences between these two races, thus providing the strain-specific information for the development of durable, disease-resistant crop lines.</p>
<p>In addition to the genetic basis for pathogen stress, <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.1006510">Luo et&#xa0;al.</ext-link> also reported the fine mapping study of a <italic>Hairy glume</italic> gene, responsible for trichomes on wheat glumes, which is largely involved in resistance to various biotic and abiotic stresses, as well as in defense to against insect pests.</p>
</sec>
<sec id="s3">
<title>Abiotic stress response in <italic>Triticeae</italic> crops</title>
<p>Natural cultivation conditions, such as light, nutrients, water, and salinity, determine crop adaptability and affect their yield and quality. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.924565">Yang et&#xa0;al.</ext-link> discovered that low-light stressed wheat could alter its pollination type to enable outcrossing with heterologous pollen by increasing lemma and glume angles, which finally compensated for the 2.1&#x2013;18.0% loss in grain number. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.1062575">Liu et&#xa0;al.</ext-link> analyzed the transcriptional mechanism of the response to low-nitrogen stress of a previously located major stable QTL for wheat root growth, QMrl-7B, and found genes encoding NO<sup>3-</sup> transporters, etc, composing the complex regulatory network for root determination. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.1042078">Li et&#xa0;al.</ext-link> also performed the transcriptome profiling of the well-known transcription factor gene family, WRKYs, in Tritiprum and the response of TtWRKY256 to salt stress. Moreover, considering that the chlorophyll content could directly impact photosynthesis and affect crop health, <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.896408">Wang et&#xa0;al.</ext-link> proposed an unmanned aerial vehicle (UAV)-based approach to rapidly and efficiently predict chlorophyll content under irrigation and drought stress to provide insights into the capacity of UAV-based remote sensing for phenotyping to improve crop breeding.</p>
</sec>
<sec id="s4">
<title>Yield-related trait response to stresses in <italic>Triticeae</italic> crops</title>
<p>Maintaining yield performance under various unfavorable conditions is the main concern for breeders during genetic improvement of resistance or tolerance to both biotic and abiotic stresses (<xref ref-type="bibr" rid="B1">Deng et&#xa0;al., 2017</xref>). <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.1057701">Wang et&#xa0;al.</ext-link> studied a set of 18 yield-related and agronomic traits in wheat under different irrigation regions by QTL analysis to provide insight into the genomic regions contributing to high yield in water-limited conditions and reported a novel QTL stably controlling wheat kernel length under all tested environments, facilitating the future MAS for pyramiding the favorable loci for high-yield improvement. <ext-link ext-link-type="uri" xlink:href="https://doi.org/10.3389/fpls.2022.892642">Zhang et&#xa0;al.</ext-link> identified three QTLs for wheat spikelet nodes per spike and investigated incorporation of their favorable alleles across different wheat agroecological production zones of China, such as Chengdu of the Southwestern Wheat Zone and Yuncheng and Linfen of the Huai River Valleys Facultative Wheat Zone, where the natural environmental factors were significantly different, advancing our understanding of the genetic basis of natural variation in spikelet development and its adaptation to environmental change.</p>
<p>In summary, innovative and attractive advances have been made in understanding both biotic and abiotic stress responses of <italic>Triticeae</italic> crops and their contribution to yield potential, which will facilitate wheat genetic improvement and food safety.</p>
</sec>
<sec id="s5" sec-type="author-contributions">
<title>Author contributions</title>
<p>All authors listed have made a substantial, direct, and intellectual contribution to the work and approved it for publication.</p>
</sec>
</body>
<back>
<sec id="s6" sec-type="funding-information">
<title>Funding</title>
<p>This work is supported by the Major Program of National Agricultural Science and Technology of China (NK20220607) and the Major Science and Technology Achievement Transformation of Central Universities and Institutes in Sichuan Projects (2022ZHCG0131).</p>
</sec>
<ack>
<title>Acknowledgments</title>
<p>We are greatly appreciated for the contributions from all the authors and reviewers as well as the support of the editorial office of <italic>Frontiers in Plant Science</italic>.</p>
</ack>
<sec id="s7" sec-type="COI-statement">
<title>Conflict of interest</title>
<p>The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.</p>
</sec>
<sec id="s8" sec-type="disclaimer">
<title>Publisher&#x2019;s note</title>
<p>All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.</p>
</sec>
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