Frontiers in Plant Science | Plant Bioinformatics

Review

Published on 06 Aug 2024

Voice from both sides: a molecular dialogue between transcriptional activators and repressors in seed-to-seedling transition and crop adaptation

in Plant Bioinformatics

Dongeun Go
Bailan Lu
Milad Alizadeh
Sonia Gazzarrini
Liang Song

Frontiers in Plant Science

doi 10.3389/fpls.2024.1416216

2,570 views
1 citation

Original Research

Published on 01 Aug 2024

Uncovering novel genes for drought stress in rice at germination stage using genome wide association study

in Plant Bioinformatics

Mvuyeni Nyasulu
Qi Zhong
Xiansheng Li
Xu Liu
Zhengjie Wang
Liang Chen
Haohua He
Jianmin Bian

Frontiers in Plant Science

doi 10.3389/fpls.2024.1421267

2,401 views
1 citation

Original Research

Published on 31 Jul 2024

Successful development of molecular diagnostic technology combining mini-barcoding and high-resolution melting for traditional Chinese medicine agarwood species based on single-nucleotide polymorphism in the chloroplast genome

in Plant Bioinformatics

Jian Feng
Yangyang Liu
Anzhen Xie
Yun Yang
Feifei Lv
Jianhe Wei

Frontiers in Plant Science

doi 10.3389/fpls.2024.1405168

1,631 views

Original Research

Published on 31 Jul 2024

Organ-specific transcriptional regulation by HFR1 and HY5 in response to shade in Arabidopsis

in Plant Bioinformatics

Ian Kin Yuen Choi
Amit Kumar Chaturvedi
Benny Jian Rong Sng
Kien Van Vu
In-Cheol Jang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1430639

2,274 views
1 citation

Original Research

Published on 30 Jul 2024

Genome-wide identification and expression analysis of the U-box E3 ubiquitin ligase gene family related to bacterial wilt resistance in tobacco (Nicotiana tabacum L.) and eggplant (Solanum melongena L.)

in Plant Bioinformatics

Rui Chen
Gang Gu
Binghui Zhang
Chaofan Du
Xiaolu Lin
Weiwei Cai
Yan Zheng
Tong Li
Ruiqi Wang
Xiaofang Xie

Frontiers in Plant Science

doi 10.3389/fpls.2024.1425651

2,204 views

Methods

Published on 26 Jul 2024

Deep learning-based elaiosome detection in milk thistle seed for efficient high-throughput phenotyping

in Plant Bioinformatics

Younguk Kim
Alebel Mekuriaw Abebe
Jaeyoung Kim
Suyoung Hong
Kwanghoon An
Jeehyoung Shim
Jeongho Baek

Frontiers in Plant Science

doi 10.3389/fpls.2024.1395558

1,251 views
1 citation

Original Research

Published on 23 Jul 2024

The impact of retrotransposons on castor bean genomes

in Plant Bioinformatics

Lin Kong
Tingting Zhang
Lei Ma

Frontiers in Plant Science

doi 10.3389/fpls.2024.1397215

2,006 views

Original Research

Published on 22 Jul 2024

Analyzing the defense response mechanism of Atractylodes macrocephala to Fusarium oxysporum through small RNA and degradome sequencing

in Plant Bioinformatics

Sen Fan
Yunjia Tang
Na Zhu
Qingling Meng
Yanguang Zhou
Yujin Zhao
Jingyan Xu
Chenxian Gu
Shijie Dai
Bo Zhu

Frontiers in Plant Science

doi 10.3389/fpls.2024.1415209

1,508 views

Review

Published on 18 Jul 2024

Understanding grain development in the Poaceae family by comparing conserved and distinctive pathways through omics studies in wheat and maize

in Plant Bioinformatics

Yuanyuan Ji
Thulani Hewavithana
Andrew G. Sharpe
Lingling Jin

Frontiers in Plant Science

doi 10.3389/fpls.2024.1393140

2,161 views

Original Research

Published on 17 Jul 2024

Formation mechanism and regulation analysis of trumpet leaf in Ginkgo biloba L

in Plant Bioinformatics

Xin-hui Li
Xiao-jing Kang
Xin-yue Zhang
Li-ning Su
Xing Bi
Rui-long Wang
Shi-yan Xing
Li-min Sun

Frontiers in Plant Science

doi 10.3389/fpls.2024.1367121

1,661 views
1 citation

Opinion

Published on 11 Jul 2024

Seeing in the dark: a metagenomic approach can illuminate the drivers of plant disease

in Plant Bioinformatics

Veronica Roman-Reyna
Sharifa G. Crandall

Frontiers in Plant Science

doi 10.3389/fpls.2024.1405042

3,464 views
4 citations

Original Research

Published on 08 Jul 2024

Genome-wide identification of the CAD gene family and functional analysis of putative bona fide CAD genes in tobacco (Nicotiana tabacum L.)

in Plant Bioinformatics

Mingzhu Wu
Yijun Li
Zhengtai Liu
Lin Xia
Yiyu Xiang
Lijie Zhao
Xiaobei Yang
Zefeng Li
Xiaodong Xie
Lin Wang

Frontiers in Plant Science

doi 10.3389/fpls.2024.1400213

2,582 views
3 citations

Original Research

Published on 27 Jun 2024

Genome-wide identification, characterization, and evolutionary analysis of the barley TALE gene family and its expression profiles in response to exogenous hormones

in Plant Bioinformatics

Tian-jiang Liao
Tao Huang
Hui-yan Xiong
Jie-cuo Duo
Jian-zhi Ma
Ming-yang Du
Rui-jun Duan

Frontiers in Plant Science

doi 10.3389/fpls.2024.1421702

1,871 views
2 citations

Original Research

Published on 26 Jun 2024

Characterization of the SWI/SNF complex and nucleosome organization in sorghum

in Plant Bioinformatics

Xiaofei Chen
Chao He
Huan Xu
Gongjian Zeng
Quanjun Huang
Zhuying Deng
Xiner Qin
Xiangling Shen
Yongfeng Hu

Frontiers in Plant Science

doi 10.3389/fpls.2024.1430467

2,216 views

Original Research

Published on 11 Jun 2024

Comparative transcriptome analysis reveals the potential mechanism of GA3-induced dormancy release in Suaeda glauca black seeds

in Plant Bioinformatics

Hongfei Wang
Tianjiao Xu
Yongjia Li
Rui Gao
Xuelin Tao
Jieqiong Song
Changping Li
Qiuli Li

Frontiers in Plant Science

doi 10.3389/fpls.2024.1354141

2,459 views
3 citations

Original Research

Published on 05 Jun 2024

A systems genomics and genetics approach to identify the genetic regulatory network for lignin content in Brassica napus seeds

in Plant Bioinformatics

Wentao Zhang
Erin E. Higgins
Stephen J. Robinson
Wayne E. Clarke
Kerry Boyle
Andrew G. Sharpe
Pierre R. Fobert
Isobel A. P. Parkin

Frontiers in Plant Science

doi 10.3389/fpls.2024.1393621

1,759 views