Frontiers Article Alert

Wednesday, 14 January 2015

 

Frontiers is pleased to announce a number of exciting new articles in the field of Microbiology.

 

Frontiers in Cellular and Infection Microbiology

Role of microRNAs in schistosomes and schistosomiasis
Lihui Zhu, Jinming Liu, and GUOFENG CHENG
Comparison of bacterial culture and 16S rRNA community profiling by clonal analysis and pyrosequencing for the characterization of the dentine caries-associated microbiome
Kathrin Schulze-Schweifing, Avijit Banerjee, and William Geoffrey Wade
Non-coding RNA regulation in pathogenic bacteria located inside eukaryotic cells
Álvaro D. Ortega, Juan José Quereda, M. Graciela Pucciarelli, and Francisco García-Del Portillo
LuxR solos in Photorhabdus species
Sophie Brameyer, Darko Kresovic, Helge B. Bode, and Ralf Heermann

Frontiers in Microbiology

Microbial transformation of the Deepwater Horizon oil spill—past, present, and future perspectives
Nikole E. Kimes, Amy V. Callaghan, Joseph M. Suflita, and Pamela J. Morris

Frontiers in Microbiology, section “Antimicrobials, Resistance and Chemotherapy”

The importance of growth kinetic analysis in determining bacterial susceptibility against antibiotics and silver nanoparticles
Karsten Theophel, Veronika J Schacht, Michael Schlüter, Sylvia Schnell, Catalina-Suzana Stingu, Reiner Schaumann, and Michael Bunge
Nitrogen gas flushing can be bactericidal: the temperature-dependent destiny of Bacillus weihenstephanensis KBAB4 under a pure N2 atmosphere
Patricia Munsch-Alatossava and Tapani Alatossava
The habits of highly effective phages: population dynamics as a framework for identifying therapeutic phages
James J Bull and Jason J Gill
Leishmanicidal activities of Artemisia annua leaf essential oil against Visceral Leishmaniasis
Mohammad Islamuddin, Garima Chouhan, Maujiram Tyagi, Malik Zainul Abdin, Dinkar Sahal, and Farhat Afrin

Frontiers in Microbiology, section “Aquatic Microbiology”

Effects of sample handling and cultivation bias on the specificity of bacterial communities in keratose marine sponges
Cristiane C.P. Hardoim, Massimiliano Cardinale, Ana C.B. Cúcio, Ana I.S. Esteves, Gabriele Berg, Joana R. Xavier, Cymon J. Cox, and Rodrigo Costa
Think laterally: horizontal gene transfer from symbiotic microbes may extend the phenotype of marine sessile hosts
Sandie M Degnan
Microbial and biogeochemical responses to projected future nitrate enrichment in the California upwelling system
Katherine Rose Marie Mackey, Chia-Te Chien, and Adina Paytan
The influence of human settlement on the distribution and diversity of iron-oxidizing bacteria belonging to the Gallionellaceae in tropical streams
Mariana Reis, Marcelo Ávila, Patrícia Costa, Francisco Barbosa, Riks Laanbroek, Edmar Chartone-Souza, and Andréa Nascimento
Cellulolytic potential under environmental changes in microbial communities from grassland litter
Renaud Berlemont, Steven D. Allison, Claudia Weihe, Ying Lu, Eoin L. Brodie, Jennifer B.H. Martiny, and Adam C. Martiny

Frontiers in Microbiology, section “Evolutionary and Genomic Microbiology”

Temperature dependent bacteriophages of a tropical bacterial pathogen
Martha Rebecca Jane Clokie, Jinyu Shan, Sunee Korbsrisate, Patoo Withatanung, Natalie Lazar Adler, and Edouard Galyov
Pyrosequencing reveals diverse fecal microbiota in Simmental calves during early development
Daniela Klein-Jöbstl, Elisa Schornsteiner, Evelyne Mann, Martin Wagner, Marc Drillich, and Stephan Schmitz-Esser
Comparative gene expression of Wigglesworthia inhabiting non-infected and Trypanosoma brucei gambiense-infected Glossina palpalis gambiensis flies
Illiassou Hamidou Soumana, Bernadette Tchicaya, Gustave Simo, and Anne Geiger
Sequence analysis of origins of replication in the Saccharomyces cerevisiae genomes
Wen-Chao Li, Zhe-Jin Zhong, Pan-Pan Zhu, En-Ze Deng, Hui Ding, Wei Chen, and Hao Lin
Structure-to-function relationships of bacterial translocator protein (TSPO): a focus on Pseudomonas
Charlène Leneveu-Jenvrin, Nathalie Connil, Emeline Bouffartigues, Vassilios Papadopoulos, Marc G. J. Feuilloley, and Sylvie Chevalier
Natural microbial communities supporting the transfer of the IncP-1β plasmid pB10 exhibit a higher initial content of plasmids from the same incompatibility group
Xavier Bellanger, Hélène Guilloteau, Bérengère Breuil, and Christophe Merlin

Frontiers in Microbiology, section “Extreme Microbiology”

Chemolithotrophy in the continental deep subsurface: Sanford Underground Research Facility (SURF), USA
Magdalena Rose Osburn, Doug LaRowe, Lily Momper, and Jan Amend
Benthic protists and fungi of Mediterranean deep hypsersaline anoxic basin redoxcline sediments
Joan M. Bernhard, Konstantinos Ar. Kormas, Maria G. Pachiadaki, Emma Rocke, David J. Beaudoin, Colin Morrison, Pieter T. Visscher, Alec Cobban, Victoria R. Starczak, and Virginia P Edgcomb
Investigations of potential microbial methanogenic and carbon monoxide utilization pathways in ultra-basic reducing springs associated with present-day continental serpentinization: the Tablelands, NL, CAN
Penny Lea Morrill, William J. Brazelton, Lukas Kohl, Amanda Rietze, Sarah Miles, Heidi Kavanagh, Matthew O. Schrenk, Susan E. Ziegler, and Susan Q. Lang
Insights into environmental controls on microbial communities in a continental serpentinite aquifer using a microcosm-based approach
Melitza Crespo-Medina, Katrina I. Twing, Michael David Yoshio Kubo, Tori Hoehler, Tom McCollom, Dawn Cardace, and Matthew Schrenk
Laboratory investigation of high pressure survival in Shewanella oneidensis MR-1 into the gigapascal pressure range
Rachael Hazael, Fabrizia Foglia, Liya Kardzhaliyska, Isabelle Daniel, Filip Meersman, and Paul McMillan
Microbial sulfur transformations in sediments from Subglacial Lake Whillans
Alicia M Purcell, Jill A Mikucki, Amanda Achberger, Irina Alekhina, Carlo Barbante, Brent Craig Christner, Dhritiman Ghosh, Alexander B Michaud, Andrew C Mitchell, John C Priscu, Reed Scherer, Mark Skidmore, Trista J Vick-Majors, and The WISSARD Science Team
Going from microbial ecology to genome data and back: studies on a haloalkaliphilic bacterium isolated from Soap Lake, Washington State
Melanie R. Mormile

Frontiers in Microbiology, section “Fungi and Their Interactions”

Kinetic studies of Candida parapsilosis phagocytosis by macrophages and detection of intracellular survival mechanisms
Renata Toth, Adel Toth, Csaba Papp, Ferenc Jankovic, Csaba Vagvolgyi, Judith Margaret Bain, Maria Fernanda Alonso, Lars Peter Erwig, and Attila Gacser

Frontiers in Microbiology, section “Infectious Diseases”

DotU expression is highly induced during in vivo infection and responsible for virulence and Hcp1 secretion in avian pathogenic Escherichia coli
Shaohui Wang, Jianjun Dai, Qingmei Meng, Xiangan Han, Yue Han, Yichao Zhao, Denghui Yang, Chan Ding, and Shengqing Yu
D-galactan II is an immunodominant antigen in O1 lipopolysaccharide and affects virulence in Klebsiella pneumoniae: implication in vaccine design
Pei-Fang Hsieh, Meng-Chuan Wu, Feng-Ling Yang, Chun-Tang Chen, Tzu-Chi Lou, Yi-Yin Chen, Shih-Hsiung Wu, Jin-Chuan Sheu, and Jin-Town Wang

Frontiers in Microbiology, section “Microbial Immunology”

Midgut expression of immune-related genes in Glossina palpalis gambiensis challenged with Trypanosoma brucei gambiense
Illiassou Hamidou Soumana, Bernadette Tchicaya, Paul Chuchana, and Anne Geiger
APC licensing and CD4+T cell help in liver-stage malaria
Ian Nicholas Crispe
Novel approaches to identify protective malaria vaccine candidates
Wan Ni Chia, Yun Shan Goh, and Laurent Renia
Antibody and B cell responses to Plasmodium sporozoites
Johanna N Dups, Marion Pepper, and Ian Andrew Cockburn

Frontiers in Microbiology, section “Microbial Physiology and Metabolism”

Life in the slow lane; biogeochemistry of biodegraded petroleum containing reservoirs and implications for energy recovery and carbon management
Ian M Head, Neil D Gray, and Stephen R Larter
A chemical ecogenomics approach to understand the roles of secondary metabolites in fungal cereal pathogens
Yit-Heng Chooi and Peter S. Solomon
Real-time monitoring of subsurface microbial metabolism with graphite electrodes
Colin Wardman, Kelly P Nevin, and Derek R Lovley
S-layer and cytoplasmic membrane – exceptions from the typical archaeal cell wall with a focus on double membranes
Andreas Klingl

Frontiers in Microbiology, section “Microbial Symbioses”

Bacteria in Ostreococcus tauri cultures – friends, foes or hitchhikers?
Sophie Abby, Marie Touchon, Aurelien DE JODE, Nigel Grimsley, and Gwenael Piganeau
Temporal changes in the bacterial community of animal feces and their correlation with stable fly oviposition, larval development, and adult fitness
Thais Albuquerque and Ludek Zurek
Symbiont-derived β-1,3-glucanases in a social insect: mutualism beyond nutrition
Rebeca B Rosengaus, Kelley F Schultheis, Alla Yalonetskaya, Mark S Bulmer, William S DuComb, Ryan W Benson, John Paul Thottam, and Veronica Godoy-Carter
Impact of spatial distribution on the development of mutualism in microbes
Ákos T. Kovács

Frontiers in Microbiology, section “Microbiological Chemistry and Geomicrobiology”

A bioassay for the detection of benzimidazoles reveals their presence in a range of environmental samples
Terence S Crofts, Yujie Men, Lisa Alvarez-Cohen, and Michiko E Taga
Multiple sulfur isotope signatures of sulfite and thiosulfate reduction by the model dissimilatory sulfate-reducer, Desulfovibrio alaskensis str. G20
William D. Leavitt, Renata Cummins, Marian L Schmidt, Min Sub Sim, Shuhei Ono, Alexander S. Bradley, and David T. Johnston

Frontiers in Microbiology, section “Microbiotechnology, Ecotoxicology and Bioremediation”

Microbial trophic interactions and mcrA gene expression in monitoring of anaerobic digesters
Alejandra Alvarado, Lilia Montañez, SANDRA LORENA PALACIO MOLINA, Ricardo Oropeza, Miriam Paulina Luevanos Escareno, and Nagamani Balagurusamy

Frontiers in Microbiology, section “Systems Microbiology”

Population dynamics and ecology of Arcobacter in sewage
Jenny C Fisher, Arturo Levican, Maria Jose Figueras, and Sandra L. McLellan
Dynamics of tongue microbial communities with single-nucleotide resolution using oligotyping
Jessica L. Mark Welch, Daniel R. Utter, Blair J. Rossetti, David B. Mark Welch, A. Murat Eren, and Gary G. Borisy
Seeing the forest for the genes: using metagenomics to infer the aggregated traits of microbial communities
Noah Fierer, Albert Barberan, and Daniel Laughlin
Oligotyping reveals community level habitat selection within the genus Vibrio
Victor Thomas Schmidt, Julie Reveillaud, Erik Zettler, Tracy Mincer, Leslie Murphy, and Linda Amaral-Zettler
The R package otu2ot for implementing the entropy decomposition of nucleotide variation in sequence data
Alban Ramette and Pier Luigi Buttigieg

Frontiers in Microbiology, section “Terrestrial Microbiology”

Burkholderia terrae BS001 migrates proficiently with diverse fungal hosts through soil and provides protection from antifungal agents
Rashid Nazir, Diana I. Tazetdinova, and Jan Dirk van Elsas
Diversity of arsenite oxidizing bacterial communities in arsenic-rich deltaic aquifers in West Bengal, India
Devanita Ghosh, Joyanto Routh, and Punyasloke Bhadury
Responses of beneficial Bacillus amyloliquefaciens SQR9 to different soilborne fungal pathogens through the alteration of antifungal compounds production
Bing Li, Qing Li, Zhihui Xu, Nan Zhang, Qirong Shen, and Ruifu Zhang
Intra- and inter-species interactions in microbial communities
Luis Raul Comolli

Frontiers in Microbiology, section “Virology”

Induction and maintenance of DNA methylation in plant promoter sequences by apple latent spherical virus-induced transcriptional gene silencing
Tatsuya Kon and Nobuyuki Yoshikawa
D701N mutation in the PB2 protein contributes to the pathogenicity of H5N1 avian influenza viruses but not transmissibility in guinea pigs
Peirong Jiao, Liangmeng Wei, Yafen Song, Jin Cui, Hui Song, Lan Cao, Runyu Yuan, Kaijian Luo, and Ming Liao
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