Research Topic

Sub-cellular Proteomics

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Whilst significant advances have been made in whole organismal proteomics approaches, many researchers still rely on combinations of tissue selection and subcellular prefractionation methods to reduce the complexity of protein extracts from plants prior to proteomic analysis. Often this will allow ...

Whilst significant advances have been made in whole organismal proteomics approaches, many researchers still rely on combinations of tissue selection and subcellular prefractionation methods to reduce the complexity of protein extracts from plants prior to proteomic analysis. Often this will allow identification of many lower abundance proteins of the target proteome and it may involve the selection of specific organs, cell types or the isolation of specific subcellular components. These subcellular proteomes provide insight into their function following various treatments and also contribute to the wider understanding of the entire organismal proteome by cataloguing the sub-proteomes contents.

The hope for this special topic is to bring together knowledge across sub cellular components and plant species to provide a basis for accelerated research. It is hoped to provide a mini-review for each proposed section that summarizes the current understanding of a particular proteome, with the hope the every 5 - 10 years we can update these definitive publications. We are not simply after lists of identified proteins but more of a summary of what has been carried out, advances made, links to relevant resources or depositories. In some cases it would be great of people with areas of research in common could get together to form a group to review a particular section.
1. Arabidopsis Cell Wall Proteome
2. Arabidopsis Chloroplast Proteome
3. Arabidopsis Cytoskeleton Proteome
4. Arabidopsis Cytosolic Proteome
5. Arabidopsis Cytosolic Ribosome Proteome
6. Arabidopsis Endoplasmic Reticulum Proteome
7. Arabidopsis Golgi Proteome
8. Arabidopsis Mitochondrial Proteome
9. Arabidopsis Nucleus Proteome
10. Arabidopsis Peroxisome Proteome
11. Arabidopsis Plasma Membrane Proteome
12. Arabidopsis Vacuole/Tonoplast proteome
13. Barley Chloroplast Proteome
14. Barley Plasma Membrane Proteome
15. Barley Vacuole/Tonoplast proteome
16. Cereal Chloroplast Proteome
17. Chloroplast Grana Proteome
18. Maize Cell Wall/Plasma Membrane Proteome
19. Maize Chloroplast Proteome
20. Maize Mitochondrial Proteome
21. Maize Nucleus Proteome
22. Maize Plasma Membrane Proteome
23. Medicago Cell Wall Proteome
24. Medicago Mitochondrial Proteome
25. Medicago Nucleus Proteome
26. Medicago Plasma Membrane Proteome
27. Medicago Root Plastid Proteomics
28. Mustard Chloroplast Proteome
29. Nucleolus Proteome
30. Pea Chloroplast Proteome
31. Pea Plasma Membrane Proteome
32. Phosphorylated Plasma Membrane Proteome
33. Phosphorylated Proteome
34. Pine Tree Golgi Proteome
35. Plasmodesmal Proteome
36. Poplar Chloroplast Proteome
37. Poplar Plasma Membrane Proteome
38. Potato Vacuole/Tonoplast proteome
39. Promex Database
40. Rice Cell Wall Proteome
41. Rice Cytoskeleton Proteome

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