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6 articles related to "Sequence Data Analysis"

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Articles

Technology and Code

Published on 20 Nov 2020

Cascabel: A Scalable and Versatile Amplicon Sequence Data Analysis Pipeline Delivering Reproducible and Documented Results

in Computational Genomics

Alejandro Abdala Asbun
Marc A. Besseling
Sergio Balzano
Judith D. L. van Bleijswijk
Harry J. Witte
Laura Villanueva
Julia C. Engelmann

Frontiers in Genetics

doi 10.3389/fgene.2020.489357

6,960 views
34 citations

Methods

Published on 03 Jun 2022

MycoVarP: Mycobacterium Variant and Drug Resistance Prediction Pipeline for Whole-Genome Sequence Data Analysis

in Drug Discovery in Bioinformatics

Sandeep Swargam
Indu Kumari
Amit Kumar
Dibyabhaba Pradhan
Anwar Alam
Harpreet Singh
Anuja Jain
Kangjam Rekha Devi
Vishal Trivedi
Jogesh Sarma

Frontiers in Bioinformatics

doi 10.3389/fbinf.2021.805338

9,810 views
3 citations

Review

Published on 04 Sep 2020

Review on the Application of Machine Learning Algorithms in the Sequence Data Mining of DNA

in Computational Genomics

Aimin Yang
Wei Zhang
Jiahao Wang
Ke Yang
Yang Han
Limin Zhang

Frontiers in Bioengineering and Biotechnology

doi 10.3389/fbioe.2020.01032

76,629 views
118 citations

Methods

Published on 25 Sep 2018

High-Throughput flaA Short Variable Region Sequencing to Assess Campylobacter Diversity in Fecal Samples From Birds

in Food Microbiology

Qian Zhang
Gabriel A. Al-Ghalith
Mayumi Kobayashi
Takahiro Segawa
Mitsuto Maeda
Satoshi Okabe
Dan Knights
Satoshi Ishii

Frontiers in Microbiology

doi 10.3389/fmicb.2018.02201

3,807 views
8 citations

Review

Published on 31 Aug 2022

Insufficiency in functional genomics studies, data, and applications: A case study of bio-prospecting research in ruminant microbiome

in Evolutionary and Genomic Microbiology

Kgodiso J. Rabapane
Grace N. Ijoma
Tonderayi S. Matambo

Frontiers in Genetics

doi 10.3389/fgene.2022.946449

5,213 views
3 citations

Original Research

Published on 27 Aug 2020

Pathogenomics Characterization of an Emerging Fungal Pathogen, Fusarium oxysporum f. sp. lycopersici in Greenhouse Tomato Production Systems

in Microbe and Virus Interactions with Plants

Tika B. Adhikari
Anne Gao
Thomas Ingram
Frank J. Louws

Frontiers in Microbiology

doi 10.3389/fmicb.2020.01995

12,972 views
13 citations