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6 articles related to "Host Dna Depletion"

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Articles

Original Research

Published on 25 Oct 2022

Host DNA depletion can increase the sensitivity of Mycobacterium spp. detection through shotgun metagenomics in sputum

in Infectious Agents and Disease

Nienke A. Kok
Nilay Peker
Leonard Schuele
Jessica L. de Beer
John W. A. Rossen
Bhanu Sinha
Natacha Couto

Frontiers in Microbiology

doi 10.3389/fmicb.2022.949328

9,058 views
24 citations

Original Research

Published on 20 Apr 2023

DNA extraction protocol impacts ocular surface microbiome profile

in Systems Microbiology

Heleen Delbeke
Ingele Casteels
Marie Joossens

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1128917

5,632 views
10 citations

Original Research

Published on 26 Aug 2020

Detection of Antimicrobial Resistance Genes in the Milk Production Environment: Impact of Host DNA and Sequencing Depth

in Food Microbiology

Selene Rubiola
Francesco Chiesa
Alessandra Dalmasso
Pierluigi Di Ciccio
Tiziana Civera

Frontiers in Microbiology

doi 10.3389/fmicb.2020.01983

12,689 views
38 citations

Original Research

Published on 01 Sep 2023

Challenges and insights in the exploration of the low abundance human ocular surface microbiome

in Bacteria and Host

Elio L. Herzog
Marco Kreuzer
Martin S. Zinkernagel
Denise C. Zysset-Burri

Frontiers in Cellular and Infection Microbiology

doi 10.3389/fcimb.2023.1232147

4,704 views
12 citations

Original Research

Published on 10 Oct 2025

Resistome and microbiome profiling of bovine milk following antimicrobial dry cow therapy: insights from short- and long-read metagenomic sequencing

in Host and Microbe Associations

Leire Urrutia-Angulo
José Luis Lavín
Beatriz Oporto
Gorka Aduriz
Ana Hurtado
Medelin Ocejo

Frontiers in Microbiomes

doi 10.3389/frmbi.2025.1672438

1,812 views

Original Research

Published on 21 Dec 2022

Microbial DNA extraction of high-host content and low biomass samples: Optimized protocol for nasopharynx metagenomic studies

in Microbial Immunology

Polona Rajar
Achal Dhariwal
Gabriela Salvadori
Roger Junges
Heidi Aarø Åmdal
Dag Berild
Drude Fugelseth
Ola Didrik Saugstad
Ulrik Lausten-Thomsen
Gorm Greisen

Frontiers in Microbiology

doi 10.3389/fmicb.2022.1038120

11,576 views
31 citations