Peptide Conformation | List of Frontiers open access articles

Brief Research Report

Published on 11 Mar 2025

Cyclic peptide membrane permeability prediction using deep learning model based on molecular attention transformer

in Drug Discovery in Bioinformatics

Dawei Jiang
Zixi Chen
Hongli Du

Frontiers in Bioinformatics

doi 10.3389/fbinf.2025.1566174

6,124 views
1 citation

Original Research

Published on 02 Apr 2019

Fluoro-Aryl Substituted α,β2,3-Peptides in the Development of Foldameric Antiparallel β-Sheets: A Conformational Study

in Chemical Biology

Raffaella Bucci
Alessandro Contini
Francesca Clerici
Egle Maria Beccalli
Fernando Formaggio
Irene Maffucci
Sara Pellegrino
Maria Luisa Gelmi

Frontiers in Chemistry

doi 10.3389/fchem.2019.00192

4,545 views
19 citations

Original Research

Published on 25 Apr 2022

Physicochemical Heuristics for Identifying High Fidelity, Near-Native Structural Models of Peptide/MHC Complexes

in T Cell Biology

Grant L. J. Keller
Laura I. Weiss
Brian M. Baker

Frontiers in Immunology

doi 10.3389/fimmu.2022.887759

4,303 views
11 citations

Original Research

Published on 14 Jan 2022

Systematic Modeling, Prediction, and Comparison of Domain–Peptide Affinities: Does it Work Effectively With the Peptide QSAR Methodology?

in Computational Genomics

Qian Liu
Jing Lin
Li Wen
Shaozhou Wang
Peng Zhou
Li Mei
Shuyong Shang

Frontiers in Genetics

doi 10.3389/fgene.2021.800857

5,550 views
49 citations

Original Research

Published on 08 Jan 2020

Illumination of PRRSV Cytotoxic T Lymphocyte Epitopes by the Three-Dimensional Structure and Peptidome of Swine Lymphocyte Antigen Class I (SLA-I)

in Comparative Immunology

Xiaocheng Pan
Nianzhi Zhang
Xiaohui Wei
Yinan Jiang
Rong Chen
Qirun Li
Ruiying Liang
Lijie Zhang
Lizhen Ma
Chun Xia

Frontiers in Immunology

doi 10.3389/fimmu.2019.02995

9,869 views
16 citations

Original Research

Published on 03 Mar 2026

Presence of autoantibodies targeting the shared epitope in rheumatoid arthritis and psoriatic arthritis

in Autoimmune and Autoinflammatory Disorders : Autoimmune Disorders

Eduard Graell
Juan Francisco Delgado
Antonio Domingo Gomez
Maria García-Marique
Menna Rusiñol
Albert Rodrigo
Antoni Berenguer-Llergo
Jordi Gratacos
Joan Calvet

Frontiers in Immunology

doi 10.3389/fimmu.2026.1744370

273 views

Original Research

Published on 26 Oct 2022

Molecular dynamics simulations of the adsorption of an intrinsically disordered protein: Force field and water model evaluation in comparison with experiments

in Biological Modeling and Simulation

Mona Koder Hamid
Linda K. Månsson
Viktoriia Meklesh
Per Persson
Marie Skepö

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2022.958175

6,175 views
24 citations

Original Research

Published on 13 Feb 2019

Probing Anti-inflammatory Properties Independent of NF-κB Through Conformational Constraint of Peptide-Based Interleukin-1 Receptor Biased Ligands

in Chemical Biology

Azade Geranurimi
Colin W. H. Cheng
Christiane Quiniou
Tang Zhu
Xin Hou
José Carlos Rivera
Daniel J. St-Cyr
Kim Beauregard
Vadim Bernard-Gauthier
Sylvain Chemtob

Frontiers in Chemistry

doi 10.3389/fchem.2019.00023

9,904 views
15 citations

Articles

Cyclic peptide membrane permeability prediction using deep learning model based on molecular attention transformer

Fluoro-Aryl Substituted α,β2,3-Peptides in the Development of Foldameric Antiparallel β-Sheets: A Conformational Study

Physicochemical Heuristics for Identifying High Fidelity, Near-Native Structural Models of Peptide/MHC Complexes

Systematic Modeling, Prediction, and Comparison of Domain–Peptide Affinities: Does it Work Effectively With the Peptide QSAR Methodology?

Illumination of PRRSV Cytotoxic T Lymphocyte Epitopes by the Three-Dimensional Structure and Peptidome of Swine Lymphocyte Antigen Class I (SLA-I)

Presence of autoantibodies targeting the shared epitope in rheumatoid arthritis and psoriatic arthritis

Molecular dynamics simulations of the adsorption of an intrinsically disordered protein: Force field and water model evaluation in comparison with experiments

Probing Anti-inflammatory Properties Independent of NF-κB Through Conformational Constraint of Peptide-Based Interleukin-1 Receptor Biased Ligands