3d Electron Microscopy | List of Frontiers open access articles

Original Research

Published on 15 Dec 2023

Segmentation of cellular ultrastructures on sparsely labeled 3D electron microscopy images using deep learning

in Computational BioImaging

Archana Machireddy
Guillaume Thibault
Kevin G. Loftis
Kevin Stoltz
Cecilia E. Bueno
Hannah R. Smith
Jessica L. Riesterer
Joe W. Gray
Xubo Song

Frontiers in Bioinformatics

doi 10.3389/fbinf.2023.1308708

4,405 views
9 citations

Perspective

Published on 11 Jun 2020

3D Electron Microscopy Gives a Clue: Maize Zein Bodies Bud From Central Areas of ER Sheets

in Plant Membrane Traffic and Transport

Elsa Arcalís
Ulrike Hörmann-Dietrich
Lukas Zeh
Eva Stoger

Frontiers in Plant Science

doi 10.3389/fpls.2020.00809

5,456 views
19 citations

Correction

Published on 18 Aug 2020

Corrigendum: 3D Electron Microscopy Gives a Clue: Maize Zein Bodies Bud From Central Areas of ER Sheets

in Plant Cell Biology

Elsa Arcalis
Ulrike Hörmann-Dietrich
Lukas Zeh
Eva Stoger

Frontiers in Plant Science

doi 10.3389/fpls.2020.01266

1,982 views

Original Research

Published on 17 Mar 2023

3D electron microscopy and volume-based bouton sorting reveal the selectivity of inputs onto geniculate relay cell and interneuron dendrite segments

Erin E. Maher
Alex C. Briegel
Shahrozia Imtiaz
Michael A. Fox
Hudson Golino
Alev Erisir

Frontiers in Neuroanatomy

doi 10.3389/fnana.2023.1150747

13,483 views
8 citations

Methods

Published on 16 Apr 2026

MambaSSM: efficient segmentation of brain structures in anisotropic 3D EM images via state-space models

in Brain Imaging Methods

Minjie Liu
Laifu Fang
Qinhu Zhang
Hongyu Yang

Frontiers in Neuroscience

doi 10.3389/fnins.2026.1772632

408 views

Original Research

Published on 06 Jan 2023

Multiscale imaging reveals the presence of autophagic vacuoles in developing maize endosperm

in Technical Advances in Plant Science

Elsa Arcalís
Ulrike Hörmann-Dietrich
Eva Stöger

Frontiers in Plant Science

doi 10.3389/fpls.2022.1082890

3,845 views
5 citations

Original Research

Published on 26 Jun 2019

Russell-Like Bodies in Plant Seeds Share Common Features With Prolamin Bodies and Occur Upon Recombinant Protein Production

in Plant Biotechnology

Elsa Arcalis
Verena Ibl
Julia Hilscher
Thomas Rademacher
Linda Avesani
Francesca Morandini
Luisa Bortesi
Mario Pezzotti
Alessandro Vitale
Dietmar Pum

Frontiers in Plant Science

doi 10.3389/fpls.2019.00777

6,130 views
12 citations

Original Research

Published on 11 Apr 2022

Correlative Organelle Microscopy: Fluorescence Guided Volume Electron Microscopy of Intracellular Processes

in Cell Growth and Division

Sergey V. Loginov
Job Fermie
Jantina Fokkema
Alexandra V. Agronskaia
Cilia De Heus
Gerhard A. Blab
Judith Klumperman
Hans C. Gerritsen
Nalan Liv

Frontiers in Cell and Developmental Biology

doi 10.3389/fcell.2022.829545

8,948 views
10 citations

Technology and Code

Published on 06 Mar 2026

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank

in Data Visualization

Neli Fonseca
Amudha Kumari Duraisamy
Zhe Wang
Sriram Somasundharam
Minoosadat Tayebinia
Lucas C. de Oliveira
Miao Ma
Jack Turner
Ardan Patwardhan
Gerard J. Kleywegt

Frontiers in Bioinformatics

doi 10.3389/fbinf.2026.1763403

618 views

Articles

Segmentation of cellular ultrastructures on sparsely labeled 3D electron microscopy images using deep learning

3D Electron Microscopy Gives a Clue: Maize Zein Bodies Bud From Central Areas of ER Sheets

Corrigendum: 3D Electron Microscopy Gives a Clue: Maize Zein Bodies Bud From Central Areas of ER Sheets

3D electron microscopy and volume-based bouton sorting reveal the selectivity of inputs onto geniculate relay cell and interneuron dendrite segments

MambaSSM: efficient segmentation of brain structures in anisotropic 3D EM images via state-space models

Multiscale imaging reveals the presence of autophagic vacuoles in developing maize endosperm

Russell-Like Bodies in Plant Seeds Share Common Features With Prolamin Bodies and Occur Upon Recombinant Protein Production

Correlative Organelle Microscopy: Fluorescence Guided Volume Electron Microscopy of Intracellular Processes

Chart builder: an interactive tool for user driven data visualization in the electron microscopy data bank