Computational Biophysics | List of Frontiers open access articles

Original Research

Published on 17 Apr 2023

Next generation immuno-oncology tumor profiling using a rapid, non-invasive, computational biophysics biomarker in early-stage breast cancer

in Medicine and Public Health

Daniel Cook
Matthew Biancalana
Nicole Liadis
Dorys Lopez Ramos
Yuhan Zhang
Snehal Patel
Joseph R. Peterson
John R. Pfeiffer
John A. Cole
Anuja K. Antony

Frontiers in Artificial Intelligence

doi 10.3389/frai.2023.1153083

5,643 views
6 citations

Perspective

Published on 27 Mar 2018

Gaussian-Based Smooth Dielectric Function: A Surface-Free Approach for Modeling Macromolecular Binding in Solvents

in Molecular Recognition

Arghya Chakravorty
Zhe Jia
Yunhui Peng
Nayere Tajielyato
Lisi Wang
Emil Alexov

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2018.00025

5,170 views
19 citations

Review

Published on 06 Mar 2015

On the energy components governing molecular recognition in the framework of continuum approaches

in Molecular Recognition

Lin Li
Lin Wang
Emil Alexov

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2015.00005

6,747 views
30 citations

Original Research

Published on 06 Mar 2020

In silico Metabolic Pathway Analysis Identifying Target Against Leishmaniasis – A Kinetic Modeling Approach

in Computational Genomics

Nikita Bora
Anupam Nath Jha

Frontiers in Genetics

doi 10.3389/fgene.2020.00179

9,985 views
24 citations

Review

Published on 23 Aug 2024

Metal ions in biomedically relevant macromolecular structures

in Chemical Biology

Karolina A. Majorek
Michal Gucwa
Krzysztof Murzyn
Wladek Minor

Frontiers in Chemistry

doi 10.3389/fchem.2024.1426211

4,093 views
9 citations

Editorial

Published on 05 May 2023

Editorial: Computational approaches to build therapeutic paradigms targeting genes, proteins and pathways against neglected tropical diseases (NTDs)

in Applied Genetic Epidemiology

Anupam Nath Jha

Frontiers in Genetics

doi 10.3389/fgene.2023.1183034

2,071 views
4 citations

Original Research

Published on 04 Sep 2019

DFMD: Fast and Effective DelPhiForce Steered Molecular Dynamics Approach to Model Ligand Approach Toward a Receptor: Application to Spermine Synthase Enzyme

in Molecular Recognition

Yunhui Peng
Ye Yang
Lin Li
Zhe Jia
Weiguo Cao
Emil Alexov

Frontiers in Molecular Biosciences

doi 10.3389/fmolb.2019.00074

6,020 views
17 citations

Original Research

Published on 09 Mar 2016

Low-Dimensional Models of “Neuro-Glio-Vascular Unit” for Describing Neural Dynamics under Normal and Energy-Starved Conditions

in Stroke

Karishma Chhabria
V. Srinivasa Chakravarthy

Frontiers in Neurology

doi 10.3389/fneur.2016.00024

7,845 views
32 citations

Methods

Published on 18 Oct 2016

Spectral Entropy Based Neuronal Network Synchronization Analysis Based on Microelectrode Array Measurements

Fikret E. Kapucu
Inkeri Välkki
Jarno E. Mikkonen
Chiara Leone
Kerstin Lenk
Jarno M. A. Tanskanen
Jari A. K. Hyttinen

Frontiers in Computational Neuroscience

doi 10.3389/fncom.2016.00112

8,310 views
31 citations

Correction

Published on 04 Nov 2020

Corrigendum: Spectral Entropy Based Neuronal Network Synchronization Analysis Based on Microelectrode Array Measurements

Fikret E. Kapucu
Inkeri Välkki
Jarno E. Mikkonen
Chiara Leone
Kerstin Lenk
Jarno M. A. Tanskanen
Jari A. K. Hyttinen

Frontiers in Computational Neuroscience

doi 10.3389/fncom.2020.586506

2,331 views

Original Research

Published on 05 May 2020

Exhaustion of Skeletal Muscle Fibers Within Seconds: Incorporating Phosphate Kinetics Into a Hill-Type Model

in Striated Muscle Physiology

Robert Rockenfeller
Michael Günther
Norman Stutzig
Daniel F. B. Haeufle
Tobias Siebert
Syn Schmitt
Kay Leichsenring
Markus Böl
Thomas Götz

Frontiers in Physiology

doi 10.3389/fphys.2020.00306

9,417 views
20 citations

Original Research

Published on 23 Sep 2022

Validation of the X-ray microtomography in the assessment of duodenal morphometry and surface area in celiac disease

in Mucosal Immunity

Johannes Virta
Markus Hannula
Katri Lindfors
Ilmari Tamminen
Juha Taavela
Heini Huhtala
Katri Kaukinen
Päivi Saavalainen
Jari Hyttinen
Kalle Kurppa

Frontiers in Immunology

doi 10.3389/fimmu.2022.945197

2,454 views
6 citations

Opinion

Published on 04 Jul 2022

Is the Harm-to-Benefit Ratio a Key Criterion in Vaccine Approval?

in Infectious Diseases: Pathogenesis and Therapy

Falk Mörl
Michael Günther
Robert Rockenfeller

Frontiers in Medicine

doi 10.3389/fmed.2022.879120

9,753 views
3 citations

Original Research

Published on 26 Aug 2021

Neuronal and Astrocytic Regulations in Schizophrenia: A Computational Modelling Study

in Non-Neuronal Cells

Lea Fritschi
Johanna Hedlund Lindmar
Florian Scheidl
Kerstin Lenk

Frontiers in Cellular Neuroscience

doi 10.3389/fncel.2021.718459

4,642 views
6 citations

Correction

Published on 30 Oct 2023

Corrigendum: Where have the dead gone?

in Infectious Diseases: Pathogenesis and Therapy

Michael Günther
Falk Mörl
Robert Rockenfeller

Frontiers in Medicine

doi 10.3389/fmed.2023.1310746

1,978 views

Opinion

Published on 16 Mar 2022

Where Have the Dead Gone?

in Infectious Diseases – Surveillance, Prevention and Treatment

Michael Günther
Falk Mörl
Robert Rockenfeller

Frontiers in Medicine

doi 10.3389/fmed.2022.837287

6,975 views

Articles

Next generation immuno-oncology tumor profiling using a rapid, non-invasive, computational biophysics biomarker in early-stage breast cancer

Gaussian-Based Smooth Dielectric Function: A Surface-Free Approach for Modeling Macromolecular Binding in Solvents

On the energy components governing molecular recognition in the framework of continuum approaches

In silico Metabolic Pathway Analysis Identifying Target Against Leishmaniasis – A Kinetic Modeling Approach

Metal ions in biomedically relevant macromolecular structures

Editorial: Computational approaches to build therapeutic paradigms targeting genes, proteins and pathways against neglected tropical diseases (NTDs)

DFMD: Fast and Effective DelPhiForce Steered Molecular Dynamics Approach to Model Ligand Approach Toward a Receptor: Application to Spermine Synthase Enzyme

Low-Dimensional Models of “Neuro-Glio-Vascular Unit” for Describing Neural Dynamics under Normal and Energy-Starved Conditions

Spectral Entropy Based Neuronal Network Synchronization Analysis Based on Microelectrode Array Measurements

Corrigendum: Spectral Entropy Based Neuronal Network Synchronization Analysis Based on Microelectrode Array Measurements

Exhaustion of Skeletal Muscle Fibers Within Seconds: Incorporating Phosphate Kinetics Into a Hill-Type Model

Validation of the X-ray microtomography in the assessment of duodenal morphometry and surface area in celiac disease

Is the Harm-to-Benefit Ratio a Key Criterion in Vaccine Approval?

Neuronal and Astrocytic Regulations in Schizophrenia: A Computational Modelling Study

Corrigendum: Where have the dead gone?

Where Have the Dead Gone?