Description Framework | List of Frontiers open access articles

Brief Research Report

Published on 14 Feb 2022

The AOP-DB RDF: Applying FAIR Principles to the Semantic Integration of AOP Data Using the Research Description Framework

in Computational Toxicology and Informatics

Holly M. Mortensen
Marvin Martens
Jonathan Senn
Trevor Levey
Chris T. Evelo
Egon L. Willighagen
Thomas Exner

Frontiers in Toxicology

doi 10.3389/ftox.2022.803983

5,224 views
14 citations

Technology and Code

Published on 21 Jan 2025

A scalable tool for analyzing genomic variants of humans using knowledge graphs and graph machine learning

in Data Science

Shivika Prasanna
Ajay Kumar
Deepthi Rao
Eduardo J. Simoes
Praveen Rao

Frontiers in Big Data

doi 10.3389/fdata.2024.1466391

3,097 views
1 citation

Original Research

Published on 24 Feb 2022

NLIMED: Natural Language Interface for Model Entity Discovery in Biosimulation Model Repositories

in Computational Physiology and Medicine

Yuda Munarko
Dewan M. Sarwar
Anand Rampadarath
Koray Atalag
John H. Gennari
Maxwell L. Neal
David P. Nickerson

Frontiers in Physiology

doi 10.3389/fphys.2022.820683

3,148 views
4 citations

Original Research

Published on 25 Apr 2025

Large language models for intelligent RDF knowledge graph construction: results from medical ontology mapping

in Machine Learning and Artificial Intelligence

Apostolos Mavridis
Stergios Tegos
Christos Anastasiou
Maria Papoutsoglou
Georgios Meditskos

Frontiers in Artificial Intelligence

doi 10.3389/frai.2025.1546179

10,471 views
7 citations

Original Research

Published on 11 Aug 2015

ReprOlive: a database with linked data for the olive tree (Olea europaea L.) reproductive transcriptome

in Plant Genetics and Genomics

Rosario Carmona
Adoración Zafra
Pedro Seoane
Antonio J. Castro
Darío Guerrero-Fernández
Trinidad Castillo-Castillo
Ana Medina-García
Francisco M. Cánovas
José F. Aldana-Montes
Ismael Navas-Delgado

Frontiers in Plant Science

doi 10.3389/fpls.2015.00625

10,593 views
50 citations

Methods

Published on 30 Apr 2018

A Semantic Transformation Methodology for the Secondary Use of Observational Healthcare Data in Postmarketing Safety Studies

in Drugs Outcomes Research and Policies

Anil Pacaci
Suat Gonul
A. Anil Sinaci
Mustafa Yuksel
Gokce B. Laleci Erturkmen

Frontiers in Pharmacology

doi 10.3389/fphar.2018.00435

9,029 views
28 citations

Articles

The AOP-DB RDF: Applying FAIR Principles to the Semantic Integration of AOP Data Using the Research Description Framework

A scalable tool for analyzing genomic variants of humans using knowledge graphs and graph machine learning

NLIMED: Natural Language Interface for Model Entity Discovery in Biosimulation Model Repositories

Large language models for intelligent RDF knowledge graph construction: results from medical ontology mapping

ReprOlive: a database with linked data for the olive tree (Olea europaea L.) reproductive transcriptome

A Semantic Transformation Methodology for the Secondary Use of Observational Healthcare Data in Postmarketing Safety Studies