Epidemiological Typing | List of Frontiers open access articles

Original Research

Published on 14 Jul 2022

Whole Genome Multi-Locus Sequence Typing and Genomic Single Nucleotide Polymorphism Analysis for Epidemiological Typing of Pseudomonas aeruginosa From Indonesian Intensive Care Units

in Evolutionary and Genomic Microbiology

Manisha Goyal
Andreu Coello Pelegrin
Magali Jaillard
Yulia Rosa Saharman
Corné H. W. Klaassen
Henri A. Verbrugh
Juliëtte A. Severin
Alex van Belkum

Frontiers in Microbiology

doi 10.3389/fmicb.2022.861222

4,388 views
2 citations

Technology Report

Published on 03 Aug 2017

PathoBacTyper: A Web Server for Pathogenic Bacteria Identification and Molecular Genotyping

in Infectious Agents and Disease

Ming-Hsin Tsai
Yen-Yi Liu
Von-Wun Soo

Frontiers in Microbiology

doi 10.3389/fmicb.2017.01474

6,424 views
10 citations

Original Research

Published on 19 Jan 2016

Phylogenetic Analyses of Shigella and Enteroinvasive Escherichia coli for the Identification of Molecular Epidemiological Markers: Whole-Genome Comparative Analysis Does Not Support Distinct Genera Designation

in Evolutionary and Genomic Microbiology

Emily A. Pettengill
James B. Pettengill
Rachel Binet

Frontiers in Microbiology

doi 10.3389/fmicb.2015.01573

18,026 views
98 citations

Original Research

Published on 18 Nov 2021

Characterisation and Molecular Analysis of an Unusual Chimeric Methicillin Resistant Staphylococcus Aureus Strain and its Bacteriophages

in Genomic Assay Technology

Sindy Burgold-Voigt
Stefan Monecke
Alexandra Simbeck
Thomas Holzmann
Bärbel Kieninger
Elisabeth M. Liebler-Tenorio
Sascha D. Braun
Maximilian Collatz
Celia Diezel
Elke Müller

Frontiers in Genetics

doi 10.3389/fgene.2021.723958

5,278 views
13 citations

Original Research

Published on 18 Jul 2019

Epidemiology Characteristics of Streptococcus pneumoniae From Children With Pneumonia in Shanghai: A Retrospective Study

in Clinical and Diagnostic Microbiology and Immunology

Wantong Zhao
Fen Pan
Bingjie Wang
Chun Wang
Yan Sun
Tiandong Zhang
Yingying Shi
Hong Zhang

Frontiers in Cellular and Infection Microbiology

doi 10.3389/fcimb.2019.00258

26,224 views
53 citations

Original Research

Published on 02 Jul 2025

Shiga toxin-producing Escherichia coli illness in Aotearoa | New Zealand, 2016-2022: epidemiological, genomic and traditional typing analyses provide insight into a significant endemic disease while highlighting knowledge gaps

in Infectious Agents and Disease

Jacqueline Wright
David Duncan
Hugo Strydom
Shevaun Paine
Sarah Jefferies
Joep de Ligt
Lucia Rivas
Michael Addidle
Adrian L. Cookson
David Winter

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1605469

3,409 views

Original Research

Published on 19 Aug 2021

Antibiotic Resistance Profiles and Molecular Characteristics of Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli and Klebsiella pneumoniae Isolated From Shrimp Aquaculture Farms in Kerala, India

in Antimicrobials, Resistance and Chemotherapy

Gopalan Krishnan Sivaraman
Vineeth Rajan
Ardhra Vijayan
Ravikrishnan Elangovan
Alison Prendiville
Till T. Bachmann

Frontiers in Microbiology

doi 10.3389/fmicb.2021.622891

15,037 views
58 citations

Articles

Whole Genome Multi-Locus Sequence Typing and Genomic Single Nucleotide Polymorphism Analysis for Epidemiological Typing of Pseudomonas aeruginosa From Indonesian Intensive Care Units

PathoBacTyper: A Web Server for Pathogenic Bacteria Identification and Molecular Genotyping

Phylogenetic Analyses of Shigella and Enteroinvasive Escherichia coli for the Identification of Molecular Epidemiological Markers: Whole-Genome Comparative Analysis Does Not Support Distinct Genera Designation

Characterisation and Molecular Analysis of an Unusual Chimeric Methicillin Resistant Staphylococcus Aureus Strain and its Bacteriophages

Epidemiology Characteristics of Streptococcus pneumoniae From Children With Pneumonia in Shanghai: A Retrospective Study

Shiga toxin-producing Escherichia coli illness in Aotearoa | New Zealand, 2016-2022: epidemiological, genomic and traditional typing analyses provide insight into a significant endemic disease while highlighting knowledge gaps

Antibiotic Resistance Profiles and Molecular Characteristics of Extended-Spectrum Beta-Lactamase (ESBL)-Producing Escherichia coli and Klebsiella pneumoniae Isolated From Shrimp Aquaculture Farms in Kerala, India