Prokka | List of Frontiers open access articles

Original Research

Published on 09 Jul 2025

Characterization of holins, the membrane proteins of coliphage ASEC2201: a genomewide in silico approach

in Phage Biology

Humaira Saeed
Sudhaker Padmesh
Aditi Singh
Sujeet Pratap Singh
Mohammed Haris Siddiqui
Manodeep Sen
Imran Hussain
Mirza Masroor Ali Beg

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1550594

3,403 views
2 citations

Original Research

Published on 04 Jul 2019

Pan-Genomic and Polymorphic Driven Prediction of Antibiotic Resistance in Elizabethkingia

in Antimicrobials, Resistance and Chemotherapy

Bryan Naidenov
Alexander Lim
Karyn Willyerd
Nathanial J. Torres
William L. Johnson
Hong Jin Hwang
Peter Hoyt
John E. Gustafson
Charles Chen

Frontiers in Microbiology

doi 10.3389/fmicb.2019.01446

11,502 views
22 citations

Original Research

Published on 16 Mar 2023

Molecular analysis of clinical Citrobacter spp. isolates: Acquisition of the Yersinia high-pathogenicity island mediated by ICEkp in C. freundii

in Evolutionary and Genomic Microbiology

Guangcun Zhang
Qiang Zhao
Kun Ye
Liyan Ye
Yanning Ma
Jiyong Yang

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1056790

5,969 views
8 citations

Original Research

Published on 01 Jun 2023

Genome-wide identification and oxacillinase OXA distribution characteristics of Acinetobacter spp. based on a global database

in Antimicrobials, Resistance and Chemotherapy

Jia Li
Yang Li
Xiaoli Cao
Jie Zheng
Yan Zhang
Hui Xie
Chuchu Li
Chang Liu
Han Shen

Frontiers in Microbiology

doi 10.3389/fmicb.2023.1174200

7,162 views
25 citations

Perspective

Published on 20 Mar 2019

A Phage-Like Plasmid Carrying blaKPC-2 Gene in Carbapenem-Resistant Pseudomonas aeruginosa

in Antimicrobials, Resistance and Chemotherapy

Renata Galetti
Leonardo Neves Andrade
Alessandro M. Varani
Ana Lúcia Costa Darini

Frontiers in Microbiology

doi 10.3389/fmicb.2019.00572

6,264 views
32 citations

Original Research

Published on 09 Jul 2025

High genome diversity of Klebsiella pneumoniae strains isolated from a Chinese traditional medicine hospital in Jiangsu province, China, from 2023 to 2024

in Antimicrobials, Resistance and Chemotherapy

Yitong Wang
Si Qin
Hongxiong Guo

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1575216

2,605 views

Original Research

Published on 15 Jan 2025

Global insights into the genome dynamics of Clostridioides difficile associated with antimicrobial resistance, virulence, and genomic adaptations among clonal lineages

in Clinical Infectious Diseases

Mohammad Sholeh
Masoumeh Beig
Ebrahim Kouhsari
Mahdi Rohani
Mohammad Katouli
Farzad Badmasti

Frontiers in Cellular and Infection Microbiology

doi 10.3389/fcimb.2024.1493225

5,173 views
4 citations

Original Research

Published on 02 Apr 2019

Discovery of Shiga Toxin-Producing Escherichia coli (STEC)-Specific Bacteriophages From Non-fecal Composts Using Genomic Characterization

in Virology

Yen-Te Liao
Xincheng Sun
Irwin A. Quintela
David F. Bridges
Fang Liu
Yujie Zhang
Alexandra Salvador
Vivian C. H. Wu

Frontiers in Microbiology

doi 10.3389/fmicb.2019.00627

7,288 views
21 citations

Original Research

Published on 31 Oct 2025

Genetic and virulence factors behind the success of high-risk Pseudomonas aeruginosa clones: insights from comparative genomics and an experimental infection model

in Antimicrobials, Resistance and Chemotherapy

Romário Oliveira de Sales
Laura Leaden
Dayblegschwel Santos Martins
Paula Koga
Alexandra do Rosario Toniolo
Fernando Gatti de Menezes
Marcelo Alves Mori
Marines D. V. Martino
Patricia Severino

Frontiers in Microbiology

doi 10.3389/fmicb.2025.1674635

2,367 views
1 citation

Original Research

Published on 28 Jul 2022

Whole genome sequencing of the multidrug-resistant Chryseobacterium indologenes isolated from a patient in Brazil

in Infectious Diseases – Surveillance, Prevention and Treatment

Marcelo Silva Folhas Damas
Roumayne Lopes Ferreira
Emeline Boni Campanini
Gabriela Guerrera Soares
Leslie Camelo Campos
Pedro Mendes Laprega
Andrea Soares da Costa
Caio César de Melo Freire
André Pitondo-Silva
Louise Teixeira Cerdeira

Frontiers in Medicine

doi 10.3389/fmed.2022.931379

12,932 views
17 citations

Articles

Characterization of holins, the membrane proteins of coliphage ASEC2201: a genomewide in silico approach

Pan-Genomic and Polymorphic Driven Prediction of Antibiotic Resistance in Elizabethkingia

Molecular analysis of clinical Citrobacter spp. isolates: Acquisition of the Yersinia high-pathogenicity island mediated by ICEkp in C. freundii

Genome-wide identification and oxacillinase OXA distribution characteristics of Acinetobacter spp. based on a global database

A Phage-Like Plasmid Carrying blaKPC-2 Gene in Carbapenem-Resistant Pseudomonas aeruginosa

High genome diversity of Klebsiella pneumoniae strains isolated from a Chinese traditional medicine hospital in Jiangsu province, China, from 2023 to 2024

Global insights into the genome dynamics of Clostridioides difficile associated with antimicrobial resistance, virulence, and genomic adaptations among clonal lineages

Discovery of Shiga Toxin-Producing Escherichia coli (STEC)-Specific Bacteriophages From Non-fecal Composts Using Genomic Characterization

Genetic and virulence factors behind the success of high-risk Pseudomonas aeruginosa clones: insights from comparative genomics and an experimental infection model

Whole genome sequencing of the multidrug-resistant Chryseobacterium indologenes isolated from a patient in Brazil