Sec.Systems Biology Archive
Corrigendum: Identification of Breast Cancer Subtype Specific MicroRNAs Using Survival Analysis to Find Their Role in Transcriptomic Regulation
- 1Laboratory of Functional and Structural Genomics, Center of New Technologies, University of Warsaw, Warsaw, Poland
- 2College of Inter-Faculty Individual Studies in Mathematics and Natural Sciences, University of Warsaw, Warsaw, Poland
- 3Department of Computer Science and Engineering, National Institute of Technical Teachers’ Training and Research, Kolkata, India
- 4Cognitive and Analytics, Larsen & Toubro Infotech Ltd., Pune, India
- 5Department of Computer Science & Engineering, Jadavpur University, Kolkata, India
- 6Faculty of Mathematics and Information Science, Warsaw University of Technology, Warsaw, Poland
by Denkiewicz M, Saha I, Rakshit S, Sarkar JP and Plewczynski D (2019). Front. Genet. 10:1047. doi: 10.3389/fgene.2019.01047
In the original article, there are errors in the reference list the reference. The authors cited a few old versions of literature even though the latest version were consulted in the study.
The Reference for “MATLAB, 2010” was incorrectly written as “MATLAB (2010). version 7.10.0 (R2010a). Natick, Massachusetts: The MathWorks Inc.”. It should be “MATLAB (2018). version 9.4.0 (R2018a). Natick, Massachusetts: The MathWorks Inc.”.
The reference for “Chou et al., 2016” was incorrectly written as “Chou, C.-H., Chang, N.-W., Shrestha, S., Hsu, S.-D., Lin, Y.-L., Lee, W.-H., et al. (2016). miRTarBase 2016: updates to the experimentally validated miRNA-target interactions database. Nucleic Acids Res. 44, D239–D247. doi: 10.1093/nar/gkv1258”. It should be “Chou, C. H., Shrestha, S., Yang, C. D., Chang. N. W., Lin, Y. L., Liao, K. W., et al. (2018). miRTarBase update 2018: a resource for experimentally validated microRNA-target interactions. Nucleic Acids Res. 46 (D1), D296–D302. doi: 10.1093/nar/gkx1067”.
The reference for “Wang et al., 2010” was incorrectly written as “Wang, J., Lu, M., Qiu, C., and Cui, Q. (2010). TransmiR: a transcription factor-microRNA regulation database. Nucleic Acids Res. 38, D119 -D122. doi: 10.1093/nar/gkp803”. It should be “Tong, Z., Cui, Q., Wang, J., and Zhou,Y. (2019). TransmiR v2.0: an updated transcription factor-microRNA regulation database. Nucleic Acids Res. 47 (D1), D253 -D258. doi: 10.1093/nar/gky1023”.
The reference for “Han et al., 2015” was incorrectly written as “Han, H., Shim, H., Shin, D., Shim, J. E., Ko, Y., Shin, J., et al. (2015). TRRUST: a reference database of human transcriptional regulatory interactions. Sci. Rep. 5, 11432. doi: 10.1038/srep11432”. It should be “Han, H., Cho, J. W., Lee, S., Yun, A., Kim, H., Bae, D., et al. (2018). TRRUST v2: an expanded reference database of human and mouse transcriptional regulatory interactions. Nucleic Acids Res. 46 (D1), D380–D386. doi: 10.1093/nar/gkx1013”
The authors apologize for these errors and state that this does not change the scientific conclusions of the article in any way. The original article has been updated.
Keywords: breast cancer, KaplanMeier estimator, miRNA-seq, Nelson-Aalen estimator, protein-protein interaction, regulatory circuit, survival analysis
Citation: Denkiewicz M, Saha I, Rakshit S, Sarkar JP and Plewczynski D (2020) Corrigendum: Identification of Breast Cancer Subtype Specific MicroRNAs Using Survival Analysis to Find Their Role in Transcriptomic Regulation. Front. Genet. 10:1382. doi: 10.3389/fgene.2019.01382
Received: 09 November 2019; Accepted: 18 December 2019;
Published: 10 February 2020.
Edited and reviewed by: Xiaogang Wu, University of Texas MD Anderson Cancer Center, United States
Copyright © 2020 Denkiewicz, Saha, Rakshit, Sarkar and Plewczynski. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
†These authors have contributed equally to this work