Abstract
Deleterious variants of more than one hundred genes are associated with hearing loss including MYO3A, MYO6, MYO7A and MYO15A and two conventional myosins MYH9 and MYH14. Variants of MYO7A also manifest as Usher syndrome associated with dysfunction of the retina and vestibule as well as hearing loss. While the functions of MYH9 and MYH14 in the inner ear are debated, MYO3A, MYO6, MYO7A and MYO15A are expressed in inner ear hair cells along with class-I myosin MYO1C and are essential for developing and maintaining functional stereocilia on the apical surface of hair cells. Stereocilia are large, cylindrical, actin-rich protrusions functioning as biological mechanosensors to detect sound, acceleration and posture. The rigidity of stereocilia is sustained by highly crosslinked unidirectionally-oriented F-actin, which also provides a scaffold for various proteins including unconventional myosins and their cargo. Typical myosin molecules consist of an ATPase head motor domain to transmit forces to F-actin, a neck containing IQ-motifs that bind regulatory light chains and a tail region with motifs recognizing partners. Instead of long coiled-coil domains characterizing conventional myosins, the tails of unconventional myosins have various motifs to anchor or transport proteins and phospholipids along the F-actin core of a stereocilium. For these myosins, decades of studies have elucidated their biochemical properties, interacting partners in hair cells and variants associated with hearing loss. However, less is known about how myosins traffic in a stereocilium using their motor function, and how each variant correlates with a clinical condition including the severity and onset of hearing loss, mode of inheritance and presence of symptoms other than hearing loss. Here, we cover the domain structures and functions of myosins associated with hearing loss together with advances, open questions about trafficking of myosins in stereocilia and correlations between hundreds of variants in myosins annotated in ClinVar and the corresponding deafness phenotypes.
1 Introduction
Sound waves pass through the outer and middle ear providing input signals to the mechanosensory organelles on the apical surface of cochlear hair cells. These organelles represented by cylindrical protrusions called stereocilia are derived during development from microvilli and are aligned in rows of graded heights that synchronously deflect in response to sound vibrations in inner ear fluids (Schwander et al., 2010) (Figures 1A–C). Mechanical sound stimuli are converted by stereocilia into electro-chemical activities in hair cells. With the exception of the tallest row, stereocilia are equipped with mechanotransduction (MET) channels at their distal ends, which are connected to the side of adjacent longer stereocilia by tip-links that gate the MET channels (). Open MET channels allow cations in the endolymph, specifically K+ and Ca2+, to flow into the hair cell cytoplasm. This influx causes a depolarization wave of the plasma membrane that propagates toward the base of hair cells, induces the opening of voltage-dependent Ca2+ channels and finally triggers Ca2+-dependent fusion of glutamate-containing synaptic vesicles at the basal surface of hair cells (; ; ) (Figure 1B).
FIGURE 1
Each stereocilium has a core of unidirectional F-actin tightly packed by actin cross-linkers, including ESPN, PLS1, FSCN2 and XIRP2 (Zheng et al., 2000; Shin et al., 2010; Scheffer et al., 2015;
The myosin superfamily is one of three major families of motor proteins along with the kinesins and dyneins. Only myosins move on F-actin (Sweeney and Holzbaur, 2018). A typical myosin molecule has an ATPase head motor domain to transmit forces to F-actin, a neck containing IQ-motifs that bind regulatory light chains and a tail region to interact with specific partners. Phylogenic analyses have revealed 18 classes of myosins (
In humans, variants of two genes encoding class-II conventional myosins, MYH9 and MYH14, and four genes encoding class-IIIA, -VI, -VIIA and -XVA unconventional myosins, MYO3A, MYO6, MYO7A and MYO15A, are presently associated with autosomal dominant or recessive nonsyndromic sensorineural hearing loss (Table 1). Variants of MYO7A are also associated with autosomal recessive Usher syndrome type 1 characterized by congenital sensorineural hearing loss, vestibular dysfunction and progressive retinitis pigmentosa (Weil et al., 1995). While the functions of MYH9 and MYH14 in the inner ear are still being debated, MYO3A, MYO6, MYO7A, MYO15A and some class-I myosins (e.g., MYO1C) are expressed in inner ear hair cells and are crucial for developing and maintaining functional stereocilia by anchoring and/or transporting specific partners on the F-actin core (Table 2). Decades of studies have identified the cargo of these unconventional myosins in a stereocilium and elucidated their contribution to normal hearing including (1) formation of the MET machinery, (2) elongation of the F-actin core and (3) tethering the plasma membrane and the ankle links to the F-actin core (
TABLE 1
| Gene | Locus | Duty ratio | Rate-limiting step | Velocity (µm/s) † | References |
|---|---|---|---|---|---|
| MYO1A | Refuted | 0.05 | Pi release | 0.07–0.1 at 37°C | |
| MYO1C | Disputed | 0.11 | Pi release | ∼0.06 at 37°C | Stauffer et al. (2005), |
| MYO1F | Disputed | N.A. | N.A. | N.A. | |
| MYO3A | DFNB30 | 0.25 (0.91‡) | ADP release | 0.11 at RT | Walsh et al. (2002), |
| MYO6 | DFNA22, DFNB37 | 0.8 (monomer) | ADP release | −0.131 (monomer), −0.307 (dimer) at 30°C§ | |
| MYO7A | DFNA11, DFNB2, USH1B | 0.9 (monomer) | ADP release | 0.19 at RT | Weil et al. (1995), |
| MYO15A | DFNB3 | ∼0.5 | ATP binding | ∼0.43 at 30°C | Wang et al. (1998), |
| MYH9 | DFNA17 | ∼0.29 | Attachment to actin or Pi release¤ | 0.29 at 30°C | |
| MYH14 | DFNA4A | ∼0.34 | Attachment to actin or Pi release¤ | 0.090 at 30°C | |
| (MYO5A) | * | 0.7 (monomer) | ADP release | 0.311 at 23°C | |
| (MYO10) | * | 0.16, 0.6 ¶ | N.A. | 0.17 at 25°C€ |
Myosins associated (or potentially associated) with human hearing loss and their kinetic properties. Prepared based on data published in reviews (O'Connell et al., 2007;
*Listed for comparison.
†F-actin sliding assay.
‡contains the N-terminal kinase domain.
§Moves toward the pointed end of F-actin.
¤In solution as discussed in a comparative study (Yengo et al., 2012).
¶Another study supports the high duty ratio of MYO10 (Takagi et al., 2014).
€(
TABLE 2
| Myosin | Presumed functions in the inner ear | N-terminal splicing variants | Major phenotypes in knockout mice | References |
|---|---|---|---|---|
| MYO1A | Unclear | Not found yet | Knockout mice show no overt phenotypes | Stauffer et al. (2005), Tyska et al. (2005), Solanki et al. (2021) |
| MYO1C | Adaptation of MET channels | Not found yet | Homozygous knockout is associated with visual impairment. Hearing loss has not been reported in peer-reviewed journals | Stauffer et al. (2005), Solanki et al. (2021) |
| MYO1F | Unclear | Not found yet | Knockout mice show impaired immune responses, but hearing loss is not reported | |
| MYO3A | Transports factors to elongate the F-actin core | Not found yet | Double knockout of Myo3a and Myo3b results in profound deafness and a dysmorphic staircase architecture of stereocilia | Salles et al. (2009), |
| MYO6 | Tethers plasma membrane to the F-actin core, keeps stereocilia in place and mediates vesicle transport including endocytosis | Not found yet | Loss of MYO6 function results in profound hearing loss and stereocilia bifurcated or fused with each other | |
| MYO7A | Helps to form tip-link and MET channel complexes and to tether ankle links during development | MYO7A-C, MYO7A-S | Mice lacking the MYO7A function (e.g., Shaker-1 mice) develop severely deformed stereocilia and show profound hearing loss | Weil et al. (1995), |
| MYO15A | Transport factors to elongate the F-actin core, nucleates actin monomers and maintains the length of mechanotransducing stereocilia | MYO15A-1, MYO15A-2, MYO15A-3 | Mice lacking the MYO15A function (e.g., Shaker-2 mice) show short stereocilia and profound hearing loss | Wang et al. (1998), |
| MYH9 | Unclear | Not found yet | Myh9-null mice are embryonic lethal. Mice with mutant Myh9 show a phenotype resembling human MYH9-related disease including platelet dysfunction and mild hearing loss | |
| MYH14 | Unclear | Not found yet | Myh14-null mice are susceptible to noise-induced hearing loss |
Presumed functions, N-terminal splicing variants and major phenotypes in mouse models.
Variants of these myosin genes affecting the coding regions can result in sensorineural hearing loss through amino-acid sequences altered by nonsense, frameshift and missense mutations and also by in-frame deletions and insertions. Variants in noncoding regions can also result in hearing loss by damaging splicing of the primary mRNA transcript or by altering its expression levels (
2 Domain structure and kinetic properties of myosins
A myosin monomer consists of an ATPase motor domain, a neck region that binds regulatory light chains and a tail region that interacts with specific partners. The motor domain consists of four subdomains, the N-terminal domain, the upper 50-kDa domain, the lower 50-kDa domain and the converter domain as previously reviewed (
FIGURE 2

Structure of myosins and associations with human hearing loss (A) Four (sub)domains of the motor domain (underlined) illustrated using the structure of myosin subfragment-1 from Gallus gallus (PDB: 2MYS) (Rayment et al., 1993). There is a large cleft between the upper and lower 50-kDa domains. Essential and regulatory light chains are also included. (B) Magnified image of the motor domain in (A) showing three amino-acid loops crucial for ATP hydrolysis (underlined). Loop 2 connects the upper and lower 50-kDa domains. (C) Schematic cycle of ATP hydrolysis illustrated based on previous reviews (
To transmit force to F-actin, myosin repeats a cycle of hydrolyzing ATP to ADP + Pi accompanying the conformational change of the motor domain (
The neck region consists of a long helix connected to the α-helix in the converter domain (Sweeney and Houdusse, 2010). The length and stability of the helix is a factor determining the step size of a myosin stroke (Sakamoto et al., 2005). The neck region contains α-helical IQ motifs with a consensus sequence, [I,L,V]QXXXRGXXX [R,K] (
The C-terminal tail regions function as an interface for various partners including myosin itself (i.e., dimerization or multimerization) and cargo (Figures 2D–F). Class II conventional myosins MYH9 and MYH14 have a long coiled-coil tail of various lengths to dimerize with each other (
FIGURE 3

Interactome and pathogenic variants of MYO3A (A) Scheme showing interacting partners of MYO3A. The N-terminal kinase domain of MYO3A can phosphorylate the kinase domain and the motor domain of MYO3A (autoinhibition). The tail has region/domains that interacts with MORN4, ESPN isoform 1 (or ESPNL) and F-actin. (B) Pathogenic or likely pathogenic MYO3A variants curated by ClinVar as of 3 December 2023. Variants are plotted on the protein domains using three categories, AD: autosomal dominant nonsyndromic hearing loss, AR: autosomal recessive nonsyndromic hearing loss, HL: hearing loss with no description on the mode of inheritance. A few studies associate three variants with autosomal dominant hearing loss although the precise mechanism of the dominant inheritance is unknown (shown with asterisk). Variants in the 3′- and 5′- untranslated regions or without clinical information are not included. Most MYO3A variants occur in the kinase domain, the motor domain and the neck region (yellow rectangle). Two noncoding variants exist in the THDI domain that interacts with ESPN isoform 1 or ESPNL (arrowheads). Variants that belong to more than one category are plotted by crosses.
A few myosins have extensions of various length at the N-terminus of the motor domain. Among the myosins associated with human hearing loss, MYO3A has a 30-kDa kinase domain at the N-terminus. In addition, some myosins have variation at the N-terminus caused by alternative splicing of the primary mRNA transcript (Figure 5B; Figure 6B). For MYO7A, presently two isoforms have been identified, the canonical isoform with an eleven amino-acid extension at the N-terminus (MYO7A-C) and a short isoform without it (MYO7A-S) (Figure 5B). There is speculation that MYO7A-C, mainly expressed in IHCs, is responsible for positioning the MET complex (
3 Myosins and hearing loss
3.1 Loci and variants
As summarized in Table 1, two genes encoding conventional myosins, MYH9 and MYH14, and four genes encoding unconventional myosins, MYO3A, MYO6, MYO7A and MYO15A, are associated with nonsyndromic hereditary hearing loss in human. The kinetic properties and functions of these myosins are different from one another. MYO3A and MYO15A are currently identified as loci of autosomal recessive nonsyndromic hearing loss, DFNB30 and DFNB3, respectively (Wang et al., 1998; Walsh et al., 2002). MYH9 and MYH14 are identified as chromosomal loci of autosomal dominant nonsyndromic hearing loss, DFNA17 and DFNA4A, respectively (
Correlation between variants of these myosin genes and clinical phenotypes is crucial for hearing researchers to (1) elucidate the pathophysiology of hearing loss, (2) predict the outcome of a given variant in a patient and (3) formulate therapeutic strategies for hearing loss. For clinicians, it would be best if the audiological prognosis is predictable including thresholds at each frequency in the pure tone audiogram, speech discrimination, time course in loss of hearing ability, mode of inheritance and penetrance. AlphaMissense (
FIGURE 4

Pathogenic and likely pathogenic MYO6 variants mapped on the domain structure. Most variants affect the motor domain and the neck region (yellow rectangle) except for some frameshift variants in the CBD (arrowheads). See the text for discussion of variants indicated by an arrow (p.Thr13fs) and an open arrowhead (p.Glu299Asp). Variants are obtained and classified as described for Figure 3.
FIGURE 5

Interactome, N-terminal splicing variations and pathogenic variants of MYO7A (A) Interacting partners of MYO7A. SANS and harmonin isoform b (harmonin b) bridge interactions with other partners. Serine and threonine-rich (PST) sequence of harmonin b can bind to F-actin (
FIGURE 6

Interactome, N-terminal splicing variations and pathogenic variants of MYO15A (A) Known interacting partners of MYO15A. A ternary complex of MYO15A, WHRN and EPS8 interacts with each other. Another ternary of WHRN, GPSM2 and GNAI3 interacts with MYO15A. EPS8 can bundle F-actin and also cap barbed ends. Interacting partners for the first MyTH4-FERM domain and the SH3 domain of MYO15A have not been identified. (B) Difference in the N-termini between three MYO15A isoforms. MYO15A-1 has a large 133-kDa N-terminal domain encoded by a single exon, while a short MYO15A-2 isoform does not include this sequence. A novel MYO15A-3 isoform has a small 6-kDa N-terminal extension. (C) Mapping of pathogenic and likely pathogenic variants of MYO15A. Variants are obtained and classified as described for Figure 3. Nonsense and frameshift mutations distribute along the entire length of MYO15A. Some missense variants are observed in the N-terminal domain (yellow rectangle with asterisk) and in the MyTH4-FERM and SH3 domains whose binding partners are unknown (yellow rectangle with double asterisk). One variant frameshifts the C-terminal PDZ ligand (arrowhead).
FIGURE 7

Pathogenic variants of MYH9 and MYH14. (A, B) Mapping of pathogenic and likely pathogenic variants in MYH9 and MYH14, correspondingly. Variants are obtained and classified as described for Figure 3 with additional categories for MYH9. Nonsense or frameshift mutations are only found close to the N-terminus or the C-terminus (arrows). Almost all MYH14 variants are associated with autosomal dominant hearing loss. In contrast, most variants of MYH9 are associated with MYH9-related disorders accompanying platelet disorders and nephritis (MYH9-REL). There is one cluster of inframe mutations (p.Gln1068_Leu1074dup, p. Gln1068_Leu1074del and p. Glu1084del) in the coiled-coil domain (open arrow) for MYH9-REL. One variant is associated with a complex of symptoms including abnormal platelets and facial dysmorphology (p.Asp1424Gly, arrowhead, categorized as FACE). All MYH9 missense variants associated with autosomal dominant hearing loss occur in the motor domain near the neck or in the neck or tail (yellow rectangle) and are associated also with MYH9-related disorders.
3.2 MYO3A
MYO3A has a 30-kDa kinase domain at the N-terminus and a tail that can interact with MORN4, isoform 1 of ESPN and F-actin (Figure 3A). The N-terminal kinase domain can phosphorylate two residues in the “loop 2” of the motor domain connecting the upper and lower 50-kDa domains and reduce the maximum actin-activated ATPase activity (kcat) and affinity for F-actin (Quintero et al., 2010). This phosphorylation may auto-regulate the MYO3A motor activity in F-actin protrusions, such as filopodia and stereocilia (Quintero et al., 2010). The kinase domain itself has two threonine residues that can be phosphorylated, of which the C-terminal threonine has a larger impact on the kinase activity (Quintero et al., 2013). Phosphorylation of the C-terminal threonine residue in the kinase domain is mediated by another MYO3A molecule or cellular kinases, likely increasing the activity of the MYO3A kinase domain (Quintero et al., 2013). This myosin was initially considered to have a high duty ratio (∼0.9) with fast phosphate release and slow ADP release (
The MYO3A tail domain is partially unfolded but has region/domains that interact with MORN4, THDI (tail homology domain I) and THDII (tail homology domain II). MORN4 can tether its interacting partners to the plasma membrane (
In humans, variants of MYO3A are associated with autosomal recessive nonsyndromic hearing loss, DFNB30 (Walsh et al., 2002). ClinVar aggregates different types of variants in this gene and associates them with autosomal recessive hearing loss or hearing loss with no description of mode of inheritance (AR and HL in Figure 3B). Most variants of MYO3A are nonsense mutations, frameshift mutations or mutations in the non-coding region and located in the kinase domain, the motor domain or the neck region (Figure 3B, yellow rectangle). These variants likely disrupt motor function by inserting a premature stop codon or by causing a shift in the reading frame (frameshift) of the mature mRNA. Two frameshift variants are reported in the THDI domain, which may disable the recruitment of ESPN isoform 1 or ESPNL to stereocilia (Figure 3B, arrowheads). Three missense mutations in the kinase domain (p.Leu239Pro) and in the motor domain (p.Gly488Glu and p. Leu697Trp) are each associated with autosomal dominant hearing loss (
A remaining question is how MYO3A traffics in a stereocilium. Currently, there is no evidence that MYO3A has a dimerization sequence, such as a coiled-coil domain, to “walk” on F-actin as a dimer or an oligomer (
3.3 MYO6
All but one myosin studied to date move on F-actin toward the barbed end. The exception is MYO6, which moves toward the pointed end of F-actin. MYO6 has an insertion called the “reverse gear” located between the converter domain and the lever arm (Wells et al., 1999; Shin et al., 2004) that is necessary for movement to the pointed end of F-actin. MYO6 also has a unique tail consisting of a single 26-kDa globular cargo binding domain (CBD) with multiple motifs to interact with a wide variety of binding partners involved in autophagy (TAX1BP, OPTN and NDP52), endocytosis (Dab2, LMTK2, TOM1/L2), mitophagy (Ubiquitin) and G-protein signaling (GIPC) (
Both autosomal dominant DFNA22 and recessive nonsyndromic hearing loss DFNB37 deafness are associated with variants of MYO6 (
3.4 MYO7A
MYO7A has a long tail domain of approximately 1,200 residues consisting of two MyTH4-FERM domains and one SH3 domain (Figure 2E). MYO7A localizes at the upper tip-link density (UTLD) with other components of the tip-link complex, USH1C (harmonin), SANS and CDH23 (
MYO7A and their interacting partners are essential components of the tip-link complex. Recent studies have elucidated an interactome among MYO7A and cargo (Figure 5A). Mouse models disabling or partially disabling the tip-link components have been useful tools to understand the formation of the tip-link complex. For example, localization of harmonin B at the UTLD is lost in mice with defective MYO7A (Myo7a4626SB/4626SB) or SANS (Ush1gjs/js) but retained in mice with mutant CDH23 (Cdh23v2J/v2J) or PCDH15 (Pcdh15av3J/av3J) (
Compared with its binding partners, less is known about how the motor activity of MYO7A is utilized in a stereocilium. Proteins in the interactome of MYO7A may provide several mechanisms for MYO7A to move in a stereocilium, (1) dimerization, (2) anchoring to the plasma membrane via CDH23 or PCDH15 (
Variants of MYO7A are associated with hearing loss and/or retinal pathology (Figure 5C). Nonsense and frameshift variants in MYO7A usually result in autosomal recessive Usher syndrome type 1 or nonsyndromic hearing loss (yellow rectangles, Figure 5C). However, some nonsense and frameshift variants are also associated with autosomal dominant nonsyndromic hearing loss (pink rectangle, Figure 5C, plotted by crosses to indicate association with multiple phenotypes). Similar overlaps are observed in missense mutations (open and closed arrowheads, Figure 5C). Furthermore, 27 variants can cause only retinal symptoms (VIS in Figure 5C). Variable expressivity of MYO7A, and perhaps genes related to MYO7A, may be a reason why one variant can show different phenotypes (Zina et al., 2001). Correlation between genotypes and phenotypes, such as onset and severity of hearing loss and presence of retinal dysfunction, is complex. Currently, it is still challenging to correlate genotypes and phenotypes in Usher syndrome (
3.5 MYO15A
The domain structure of the MYO15A tail is similar to MYO7A. Both have two MyTH4-FERM domains and one SH3 domain (Figure 2E). One large difference from MYO7A is a 133-kDa N-terminal domain encoded by exon 2 of MYO15A (Figure 6B). Formerly, two isoforms with and without this N-terminal extension were found and referred to as MYO15A-L and MYO15A-S. Recently, a third isoform with a small 6-kDa N-terminal extension was identified in cochlear hair cells (Rehman et al., 2016; Ranum et al., 2019) renaming the three isoforms as MYO15A-1, MYO15A-2 and MYO15A-3, respectively (Figure 6B). MYO15A-1 is localized at the tips of short stereocilia near PCDH15 and is essential for maintaining the length of the mechanotransducing stereocilia (
Currently, variants of MYO15A are associated with autosomal recessive nonsyndromic hearing loss DFNB3 (Figure 6C). In addition to the nonsense and frameshift mutations distributed along the entire length of MYO15A and missense mutations in the motor domain, some missense variants are observed in the large N-terminal domain indicating the importance of this sequence (yellow rectangle with asterisk, Figure 6C). One variant truncates the C-terminal PDZ ligand as previously reported (Rehman et al., 2016) (arrowhead, Figure 6C). Interestingly, some missense mutations are reported in the first MyTH4-FERM domain and in the SH3 domain suggesting that these tail domains are sites of yet to be identified binding partners (yellow rectangle with double asterisks, Figure 6C).
3.6 Non-muscle class II myosins
Currently, variants of MYH9 and MYH14 genes are associated with autosomal dominant nonsyndromic hearing loss, DFNA17 and DFNA4A, respectively (
The distribution of MYH9 and MYH14 variants are unique compared with variants of unconventional myosins (Figure 7). Nonsense or frameshift variants are only found close to the N-terminus or the C-terminus probably suggesting a dominant negative effect of truncated proteins (arrows in Figure 7). While almost all MYH14 variants are associated with autosomal dominant hearing loss, most variants of MYH9 are associated with other MYH9-related disorders including platelet disorders and nephritis (
3.7 Disputed or refuted “deafness genes”: MYO1A, MYO1C and MYO1F
To date, three genes encoding the class-I myosins, MYO1A, MYO1C and MYO1F, were initially reported as human “deafness genes” (
4 Discussion
Genetic studies have identified more than one hundred genes with variants associated with hearing loss including four genes encoding unconventional myosins, MYO3A, MYO6, MYO7A and MYO15A, and two genes encoding conventional myosins, MYH9 and MYH14. The four unconventional myosins and some class-I myosins are expressed in hair cells and are essential for developing and maintaining functional stereocilia. The tail domains of these unconventional myosins have motifs unique for each protein and have evolved to interact with specific protein partners and phospholipids (PIP2), which are often referred to as “cargo” transported and/or anchored on the F-actin core of a stereocilium. Major functions of cargo proteins can be largely categorized into (1) formation of the MET machinery, (2) elongation of the F-actin core and (3) tethering the plasma membrane and certain links to the F-actin core (Figure 1D) but not limited to these. For example, Twinfilin-2, which caps F-actin of stereocilia in shorter rows, is identified as cargo of MYO7A (Rzadzinska et al., 2009). In addition to elucidating the functions of cargo proteins in stereocilia development, recent topics include novel isoforms of MYO7A and MYO15A derived from previously “hidden” alternatively spliced small exons (Rehman et al., 2016; Ranum et al., 2019;
Compared with the interacting partners of these myosins, less is understood about how the motor activities of these myosins are utilized and regulated in a stereocilium. For example, it is unknown how MYO7A becomes localized at the UTLD and whether or not it is dimerized. In the retina, MYO7A can be recruited to melanosomes by MYRIP which activates the MYO7A motor function through cargo-mediated dimerization (
In addition, we speculate that more detailed clinical information of patients is necessary for correlation analyses between variants and phenotypes. Large databases, such as ClinVar and gnomAD, aggregate variants with clinical symptoms. However, even from these carefully curated databases, it is difficult to obtain detailed measurements necessary for hearing research, such as thresholds at each frequency in the pure tone audiograms, speech discrimination, time course in loss of hearing ability and the clinical conditions of patients including accompanying symptoms, because these details are written in a format different for each journal, database and website. From a technical point of view, more flexible approaches, such as artificial intelligence and machine learning, may be useful to handle large and often unformatted data. Artificial intelligence has already been introduced into clinical genomics laboratories and utilized to predict the pathogenicity and phenotypic consequence of variants (
Active transport by myosins are crucial for developing cell protrusions including stereocilia, microvilli and filopodia (
Statements
Author contributions
TM: Conceptualization, Funding acquisition, Methodology, Project administration, Software, Validation, Visualization, Writing–original draft, Writing–review and editing. IB: Validation, Visualization, Writing–review and editing. MS: Validation, Writing–review and editing. TF: Funding acquisition, Project administration, Validation, Writing–review and editing, Supervision.
Funding
The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. TM, IB, and TF were supported, in part, by NIDCD intramural research funds DC000039 to TF. TM and MS were also supported by the start-up fund from Southern Illinois University School of Medicine and the K99/R00 Pathway-to-Independence Award to TM (1K99DC019949 and 4R00DC019949).
Acknowledgments
We thank Drs. Dennis Winkler and Mhamed Grati for valuable comments and Ms. Erina He for her beautiful diagrams. Raw data and Python scripts used to draw graphs in Figures 3B, 4, 5C, 6C and 7 are available at the first author’s GitHub repository (https://github.com/takushim/fpvariants).
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
Publisher’s note
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.
Abbreviations
ATP, adenosine triphosphate; ADP, adenosine diphosphate; PIP2, phosphatidylinositol-4,5-bisphosphate; DFNA, chromosomal locus for dominantly inherited nonsyndromic deafness; DFNB, chromosomal locus for recessively inherited nonsyndromic deafness; ELC, essential light chain; RLC, regulatory light chain; CaM, calmodulin; IQ-motif, isoleucine-glutamine-rich motif, USH, Usher syndrome; OHC, outer hair cell; IHC, inner hair cell; RT, room temperature.
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Summary
Keywords
hearing, myosin, stereocilia, cargo transport, hereditary deafness
Citation
Miyoshi T, Belyantseva IA, Sajeevadathan M and Friedman TB (2024) Pathophysiology of human hearing loss associated with variants in myosins. Front. Physiol. 15:1374901. doi: 10.3389/fphys.2024.1374901
Received
24 January 2024
Accepted
21 February 2024
Published
18 March 2024
Volume
15 - 2024
Edited by
Manuel H. Taft, Hannover Medical School, Germany
Reviewed by
Kazuaki Homma, Northwestern University, United States
Richard Cheney, University of North Carolina at Chapel Hill, United States
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© 2024 Miyoshi, Belyantseva, Sajeevadathan and Friedman.
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*Correspondence: Takushi Miyoshi, tmiyoshi26@siumed.edu
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