Abstract
Pyk2 is a non-receptor tyrosine kinase highly enriched in forebrain neurons. Pyk2 is closely related to focal adhesion kinase (FAK), which plays an important role in sensing cell contacts with extracellular matrix and other extracellular signals controlling adhesion and survival. Pyk2 shares some of FAK’s characteristics including recruitment of Src-family kinases after autophosphorylation, scaffolding by interacting with multiple partners, and activation of downstream signaling pathways. Pyk2, however, has the unique property to respond to increases in intracellular free Ca2+, which triggers its autophosphorylation following stimulation of various receptors including glutamate NMDA receptors. Pyk2 is dephosphorylated by the striatal-enriched phosphatase (STEP) that is highly expressed in the same neuronal populations. Pyk2 localization in neurons is dynamic, and altered following stimulation, with post-synaptic and nuclear enrichment. As a signaling protein Pyk2 is involved in multiple pathways resulting in sometimes opposing functions depending on experimental models. Thus Pyk2 has a dual role on neurites and dendritic spines. With Src family kinases Pyk2 participates in postsynaptic regulations including of NMDA receptors and is necessary for specific types of synaptic plasticity and spatial memory tasks. The diverse functions of Pyk2 are also illustrated by its role in pathology. Pyk2 is activated following epileptic seizures or ischemia-reperfusion and may contribute to the consequences of these insults whereas Pyk2 deficit may contribute to the hippocampal phenotype of Huntington’s disease. Pyk2 gene, PTK2B, is associated with the risk for late-onset Alzheimer’s disease. Studies of underlying mechanisms indicate a complex contribution with involvement in amyloid toxicity and tauopathy, combined with possible functional deficits in neurons and contribution in microglia. A role of Pyk2 has also been proposed in stress-induced depression and cocaine addiction. Pyk2 is also important for the mobility of astrocytes and glioblastoma cells. The implication of Pyk2 in various pathological conditions supports its potential interest for therapeutic interventions. This is possible through molecules inhibiting its activity or increasing it through inhibition of STEP or other means, depending on a precise evaluation of the balance between positive and negative consequences of Pyk2 actions.
Introduction
Focal adhesion kinases are cytoplasmic tyrosine kinases and scaffolding proteins involved in a wide variety of physiological and pathological processes including cell adhesion, cell migration, inflammatory responses, tumor invasiveness, neuronal development, and plasticity [reviews in Girault et al. (1999a); Schaller (2010); Walkiewicz et al. (2015); Zhu et al. (2018)]. This family of kinases encompasses two members, focal adhesion kinase (FAK, coded by the Ptk2 gene in the mouse) and proline-rich tyrosine kinase 2 (Pyk2, Ptk2b gene). FAK and Pyk2 share about 45% amino acid sequence identity and 65% similarity (; Sasaki et al., 1995) but display very distinct expression patterns and some distinct properties. Whereas FAK is expressed in all tissues since early development, Pyk2 expression increases during the 3 weeks after birth in rat (Menegon et al., 1999). The full-length form of Pyk2 is highly expressed in the central nervous system (; Sasaki et al., 1995; Menegon et al., 1999). It is highly enriched in the pyramidal neurons of the hippocampus and to a lesser degree of the cerebral cortex, and also in the lateral septum, the thalamus, the amygdala, and the striatum (Menegon et al., 1999; Sheehan et al., 2003). Pyk2 is predominantly expressed in neurons but is also present in astrocytes (; Giralt et al., 2016). Pyk2 is highly expressed in monocytes and tissue-resident macrophages including osteoclasts (Duong et al., 1998) and microglial cells (; Tian et al., 2000). In neurons, Pyk2 is regulated by neuronal activity and involved in synaptic plasticity (Girault et al., 1999a; Salter and Kalia, 2004). Mutant knockout mice without Pyk2 grow and breed well under laboratory conditions (Okigaki et al., 2003; Giralt et al., 2016) and the gross anatomy of their nervous system is normal (Giralt et al., 2016) showing that Pyk2 is not essential or can be functionally replaced possibly by FAK. However, recent insights have been provided by the study of the nervous system in Pyk2 mutant mice and its role in multiple pathological conditions, including neurodegenerative diseases. Here we review the properties and function of Pyk2 in the central nervous system with a focus on its role in synaptic function and dysfunction.
Pyk2 a Multifunctional Protein Kinase With Scaffolding Properties
Pyk2 is a 1009-amino acid, 110-kDa protein (Lev et al., 1995) that was independently discovered in several laboratories in different cellular models, and hence it is also known as fakB (Kanner et al., 1994), cell adhesion kinase β [CAKβ (Sasaki et al., 1995)], related adhesion focal tyrosine kinase (RAFTK) (), and calcium-dependent protein-tyrosine kinase (CADTK) (Yu et al., 1996). Pyk2 encompasses several well-defined structural domains: an N-terminal FERM (4.1/ezrin/radixin/moesin) domain (; Girault et al., 1998, 1999b), a central tyrosine kinase domain, and a C-terminal focal adhesion targeting domain (FAT) (Hildebrand et al., 1993; Figure 1A). The short linker of 43 residues in mouse sequence between the FERM and kinase domains contains a proline-rich motif (PR1) and the autophosphorylation site, Tyr402. The longer linker of 171 residues in the mouse sequence between the kinase and FAT domain (referred below to as kinase-FAT linker, KFL) includes 2 additional proline-rich sequences (PR2 and PR3). The KFL region encompasses the most divergent sequence between FAK and Pyk2. The structure of the FERM (PDB ID 4EKU), kinase (Han et al., 2009), and FAT (Lulo et al., 2009) domains of Pyk2 has been determined by X-ray crystallography (Figure 1B) and is, as expected based on high sequence identity, very similar to that of corresponding domains in FAK. In contrast, the linkers appear to be disordered flexible regions important for Pyk2 interactions and regulation. In addition to the main full-length form of Pyk2, two protein isoforms encoded by the same gene have been described (Figure 1A). The first isoform is a splice variant expressed in hematopoietic cells, which lacks an exon encoding 42 amino acids (739–780 in rat) in KFL, between PR2 and PR3 (Dikic et al., 1998; Xiong et al., 1998). The second Pyk2 isoform, presumably transcribed from an internal initiation site, lacks the FERM and kinase domains and is referred to as Pyk2-related non-kinase (PRNK) (Xiong et al., 1998) or CRNK (Li et al., 1999). It consists of the 228 C-terminal residues of Pyk2 fused to nine unique N-terminal amino acids (Xiong et al., 1998; Figure 1A). PRNK is expressed in several tissues including the brain and may act as an endogenous regulator of Pyk2 activity (Xiong et al., 1998). Numerous proteins interacting with Pyk2 have been identified, including many also interacting with FAK. For some of these partners good evidence supports a direct interaction with Pyk2 (Table 1), whereas for others the interaction is likely to be indirect or insufficiently characterized (Table 2). Many of the direct interactions are mediated by partners’ Src-homology 3 (SH3) domain binding to Pyk2 PR motifs, while some others depend on Src-homology 2 (SH2) domain binding to specific phosphorylated tyrosine residues in Pyk2 sequence and are triggered by its activation (Table 1). Therefore Pyk2 is considered to be a scaffolding protein with multiple protein-protein interactions.
FIGURE 1
TABLE 1
| Partner | Partner binding region | Binding site in Pyk2 | Comments | References |
| ArgBP2 | SH3A | PR2 and/or PR3 | PC12, HEK293T; co-IP, GST pull-down; complex with Pyk2, Cbl | Haglund et al. (2004) |
| ASAP1 / DEF-1 / PIP2-dependent ARF1 GAP | SH3 | PR2 and/or PR3 | Rat brain, HEK293, PC12; Pyk2 P717A or P859A reduces ASAP1 phosphorylation | Kruljac-Letunic et al. (2003) |
| ASAP2 / PAG3 / PAP | SH3? | |||
| BCAR1 / p130cas | SH3 | PR2 and/or PR3 | ; Manie et al. (1997); Ohba et al. (1998); ; Takahashi et al. (2003) | |
| Related to p130Cas: embryonal Fyn-associated substrate (EFS)/ SIN | SH3 | 670–792 | Interacts more with FAK than Pyk2 | Ohba et al. (1998) |
| Related to p130Cas: enhancer of filamentation 1 (hEF1 / NEDD9 / CasL) | SH3 | PR2 and/or PR3 | Similar to p130-Cas | Manie et al. (1997) |
| Calmodulin | With Ca2+ | FERM, kinase, KFL | Multiple, see text | Kohno et al. (2008); Xie et al. (2008); Vomaske et al. (2010) |
| Disks large homolog 3 (DLG3) / Synapse-associated protein 102 (SAP102) | SH3 | PR2 and/or PR3 | Seabold et al. (2003) | |
| Disks large homolog 4 (DLG4) / PSD-95 | SH3 | PR2 and/or PR3 | Requirement of the proline-rich region of Pyk2 for binding to PSD-95 and SAP102 | Seabold et al. (2003) |
| FGFR-2, -3c | C-ter | Kinase domain? | Meyer et al. (2004) | |
| Gelsolin | C-ter | PR3 | HEK293, co-IP formation of osteoclastic actin rings | Wang et al. (2003) |
| Graf1C (RhoA GTPase-activating protein) | SH3 | PR3 > PR2 | Pyk2 inhibits Graf1c (requires kinase activity) | Lee et al. (2019) |
| Grb2 | SH2 | pTyr881 | Grb2/Ras/Raf/MEK activates ERK1/2 after short treatment of GT1-7 cells with GnRH | Li et al. (1996); Ganju et al. (1997); ; ; Okitsu-Sakurayama et al. (2018) |
| Grm1, metabotropic glutamate receptor 1, mGluR1 | 2nd intracellular loop, C-ter tail | Pyk2 displaces Gαq/11 from the receptor and activates ERK | Nicodemo et al. (2010) | |
| Grm5, metabotropic glutamate receptor 5, mGluR5 | 2nd intracellular loop, C-ter tail | Similar effects as Grm1? | Nicodemo et al. (2010) | |
| Integrin beta-3 / CD61 / GP3a | C-ter 17 aa | N-terminal | Pyk2 downstream of β3; in vitro binding | Pfaff and Jurdic (2001) |
| Megakaryocyte-associated tyrosine-protein kinase / CsK homologous kinase (CHK) / MATK | SH2 | pY402 | CHK inhibits Pyk2 phosphorylation; co-IP | McShan et al. (2002) |
| Membrane-associated phosphatidylinositol transfer protein 1, 2, 3 / PITPnm 1, 2, 3 / NIR-2, -3, -1/RdgB-homologs | C-terminal | FERM | Yeast two-hybrid assay; binding, co-IP, Pyk2 substrates | Lev et al. (1999) |
| Methyl-CpG-binding domain protein 2 (MBD2) | MBD domain | FAT? | Decreases MBD2 association with HDAC1 and methyl CpG site; binding, co-IP | Luo et al. (2009) |
| Nephrocystin-1, -4 | N-ter, SH3 | PR3 | Complex with p130Cas, tensin | ; Mollet et al. (2005) |
| Paxillin | LD domains | FAT | Hiregowdara et al. (1997); Matsuya et al. (1998); Zheng et al. (1998); Ivankovic-Dikic et al. (2000); ; Vanarotti et al. (2014) | |
| Leupaxin (LIM domains, LD, similar to paxillin) | LD | FAT | Complex with PTP-PEST; binding, co-IP | Lipsky et al. (1998); Sahu et al. (2007); Vanarotti et al. (2016) |
| HIC-5 (LIM domains, LD, similar to paxillin) | LD | FAT | Binding, co-IP | Matsuya et al. (1998); Wang et al. (2002) |
| PLC-γ1, -γ2 | C-ter SH2 and SH3 | pTyr and/or PR | Complex with β3 integrin, PLC-γ, phosphatidylinositol 3-kinase | Nakamura I. et al. (2001) |
| Protein kinase MAP4K4 (mitogen-activated protein kinase 4) | C-terminal citron homology domain (CNH) | FERM | Role in glioma cell migration | Loftus et al. (2013) |
| PTK Abl | SH2 | pTyr881 | Complex with pl90 RhoGAP (pi90), RasGAP, c-Abl, pl30cas, paxillin. | Zrihan-Licht et al. (2004) |
| PTK Fyn / p59-Fyn | SH2 | pTyr402 | Ganju et al. (1997); Qian et al. (1997); Marie-Cardine et al. (1999); Katagiri et al. (2000); Li and Gotz (2018) | |
| PTK Lck / p56-Lck | SH2 | Co-IP | Ganju et al. (1997); Qian et al. (1997) | |
| PTK Lyn / p56-Lyn | SH2? | Yamasaki et al. (2001) | ||
| PTK Src / p60-Src | SH2, SH3? | pTyr402, PR1? | Dikic et al. (1996); Duong et al. (1998); Kumar et al. (1999); Keely et al. (2000); Sanjay et al. (2001); Faccio et al. (2003); Lakkakorpi et al. (2003); ; Hum et al. (2014) | |
| PTK Yes (c-Yes / p61-Yes) | SH2? | Pancreatic acinar cells | Sancho et al. (2012) | |
| PTK ZAP-70 | SH2? | Katagiri et al. (2000) | ||
| PTP non-receptor type 11 (SHPTP2 / SHP2) | Not the SH2 domain | pTyr402 | Pyk2 is a substrate for SHPTP2 in response to dexamethasone and IL-6 | |
| PTP non-receptor type 5 / Striatum-enriched protein-tyrosine phosphatase (PTPN5 / STEP) | PR2 and KIM domains of STEP61 | 671–694 | Dephosphorylates pY402 | Xu et al. (2012) |
| Proto-oncogene vav (VAV1) | SH3 (605–662) and SH3 (786–844) | PR? | Complex with ZAP-70 | Katagiri et al. (2000) |
| FAK family kinase–interacting protein of 200 kD (FIP200) / RB1-inducible coiled-coil protein 1 | C-ter | Kinase domain | Yeast 2-hybrid, co-IP, FIP200 inhibits Pyk2 | Ueda et al. (2000) |
| RNA-binding protein EWS (EWSR1) | N-ter | 656–797 | Co-IP, pull-down | Felsch et al. (1999) |
| SAP90/PSD-95-associated protein 3 (SAPAP3) / Disks large-associated protein 3 (DAP3) | C-ter (436–977) | Yeast 2-hybrid (FAK), GST-pulldown | ||
| Src kinase-associated phosphoprotein 2 (SKAP2) / Pyk2/RAFTK-associated protein (PRAP) | SH3 | C-ter region | Yeast 2-hybrid, co-IP, may associate Pyk2 and α-synuclein | Takahashi et al. (2003) |
| Suppressor of cytokine signaling 2 (SOCS2); SOCS3 | SH2 | pY402 | SOCS2 induces proteasome-mediated degradation pPyk2 via ubiquitination | Zhang et al. (2008); Lee et al. (2010) |
Protein partners very likely or shown to interact directly with Pyk2.
Co-IP, co-immunoprecipitation; GST, glutathione-S transferase; KIM, kinase interaction motif; LD, leucine-aspartic acid motif; LIM, acronym of the three genes in which the domain was first identified: LIN-11, Isl-1 and MEC-3; PR, proline-rich motif; PTK, protein tyrosine kinase; PTP, protein tyrosine phosphatase; SH2, SH3, Src-homology 2, 3. Question marks indicate interacting domains that are not directly identified but very likely involved based on similarity with other characterized interactions.
TABLE 2
| Partner | Comments | Reference |
| α1-actin, α2-actin, β-actin | pUS28-expressing U373 or RSMC; IP, tandem MS | Vomaske et al. (2010) |
| Abl-interactor-2 | pUS28-expressing U373; IP, tandem MS; low levels | Vomaske et al. (2010) |
| AF-17 | pUS28-expressing RSMC; IP, tandem MS | Vomaske et al. (2010) |
| Alpha-1,3/1,6-mannosyltransferase / ALG2 | Co-precipitation of FAK, Pyk2 | Schmidt et al. (2003) |
| Annexin VI / annexin A6 | COS-1, Rat-1; GST pull-down, co-IP; complex with Fyn, Pyk2, p120GAP | |
| ARF GTPase-activating protein GIT1 / CAT-1 | Ko et al. (2003) | |
| BiP | pUS28-expressing U373; IP, tandem MS | Vomaske et al. (2010) |
| Copine-5 | pUS28-expressing U373; IP, tandem MS; low levels | Vomaske et al. (2010) |
| Dynamin | Possibly mediated by Grb2 | |
| E3 ubiquitin-protein ligase / Cbl /RING finger protein 56 | Osteoclasts, PC12, HEK293; co-IP; contributes to Pyk2 degradation. Involves Cbl C-terminal region | Sanjay et al. (2001); Schmidt et al. (2003); Haglund et al. (2004); Fan et al. (2014) |
| E3 ubiquitin-protein ligase CBLB / Cbl-b | MGC803; co-IP; contributes to Pyk2 degradation | Fan et al. (2014) |
| E3 ubiquitin-protein ligase NEDD4 | Pyk2 and FAK | Verma et al. (2017) |
| EGFR / ErbB-1 | Pyk2 and FAK, neurite outgrowth regulation | Ivankovic-Dikic et al. (2000); Keely et al. (2000) |
| ErbB-2 / HER2 / CD340 | Pyk2 mediates activation of MAP kinase by neuregulins. Involves Pyk2 pY402 | Zrihan-Licht et al. (2000) |
| ErbB-3 / HER3 | PYK2 regulates the degradation of HER3 | van der Horst et al. (2005); Verma et al. (2017) |
| F-actin capping proteins-a1, -a2, and –b | pUS28-expressing RSMC; IP, tandem MS; low levels | Vomaske et al. (2010) |
| GPIb-β; GPVI | Human platelets; co-IP; indirect | |
| Grin2a, glutamate receptor ionotropic NMDA 2A, GluN2A, NR2A | See text | Liu et al. (2001); Seabold et al. (2003) |
| Grin2b, glutamate receptor ionotropic NMDA 2B, GluN2B, NR2B | See text | Seabold et al. (2003) |
| G-protein subunit alpha-13 (Gα13) | Pyk2 downstream of Gα13; Co-IP | Shi et al. (2000) |
| G-protein subunit beta-5 (Gβ5) | pUS28-expressing RSMC; IP, tandem MS; low levels | Vomaske et al. (2010) |
| Hsc70 | pUS28-expressing U373; IP, tandem MS | Vomaske et al. (2010) |
| Integrator complex subunit 6 | pUS28-expressing U373; IP, tandem MS | Vomaske et al. (2010) |
| Integrin beta-1 / CD29 / MDF2 | Possibly through PI3K | Melikova et al. (2004) |
| Integrin beta-2 / CD18 / MF17 | Pyk2 downstream of β2 not associated | Yan and Novak (1999); Miura et al. (2000); Evangelista et al. (2007) |
| Interleukin-7 receptor alpha (IL-7R-alpha) | Increased by IL-7 | |
| Janus kinase 1 (JAK1) | Increased by IL-7 | |
| Janus kinase 2 (JAK2) | Pyk2 associated with and downstream of Jak2; co-IP | Takaoka et al. (1999); Frank et al. (2002) |
| Janus kinase 3 (JAK3) | Increased by IL-2; co-IP | Miyazaki et al. (1998) |
| KSR-2 | pUS28-expressing RSMC; IP, tandem MS low levels | Vomaske et al. (2010) |
| Microtubule associated protein Tau | Tau Pyk2-substrate | Dourlen et al. (2017); Li and Gotz (2018) |
| Mortalin | pUS28-expressing U373; IP, tandem MS | Vomaske et al. (2010) |
| Myosin light chain-6 | pUS28-expressing RSMC; IP, tandem MS low levels | Vomaske et al. (2010) |
| Myosin-9 | pUS28-expressing U373; IP, tandem MS | Vomaske et al. (2010) |
| N-acetyltransferase-10 | pUS28-expressing U373; IP, tandem MS | Vomaske et al. (2010) |
| Nectin-3 | pUS28-expressing U373; IP, tandem MS | Vomaske et al. (2010) |
| NFkB p105 | pUS28-expressing RSMC; IP, tandem MS low levels | Vomaske et al. (2010) |
| NIM1 kinase | pUS28-expressing U373; IP, tandem MS | Vomaske et al. (2010) |
| Phosphatidylinositol 3-kinase regulatory subunit alpha (PIK3R1 / PI3K-p85) | Complex with integrin beta-1 / CD29 / MDF2 Co-IP | Melikova et al. (2004) |
| Potassium voltage-gated channel subfamily A member 2 (KCNA2 / Kv1.2 / NGK1) | Pyk2 phosphorylates and may inhibit Kv1.2; co-IP | |
| Programmed cell death 6-interacting protein (PDCD6-interacting protein) / ALG-2-interacting protein 1 (AIP1 /Alix) | Complex with SETA/CIN85/Ruk and AIP1; HEK293 cells; co-IP | Schmidt et al. (2003) |
| Protein kinase C, PKC-alpha | Complex with β1-integrin and PI3K; myeloma cells co-IP | Podar et al. (2002) |
| Protein kinase C, PKC-delta | Pancreatic acinar cells, co-IP | Wrenn (2001) |
| PTK SYK | Complexes with Syk, SHP1, and Grb2, with β2 integrin | Ganju et al. (2000); Miura et al. (2000) |
| PTP non-receptor type 11 (SHPTP2 / SHP2) | Pyk2 substrate of SHPTP2; interaction involves pY402 but not SHP2 SH2 | |
| PTP non-receptor type 12 (PTP-PEST / PTPG1) | PTP-PEST dephosphorylates pY402, pY579 and pY580 | Lyons et al. (2001) |
| PTP non-receptor type 6 (SHPTP1 / SHP1) | SHPTP1 prevents Pyk2 phosphorylation; co-IP | Kumar et al. (1999); Ganju et al. (2000) |
| Ras GTPase-activating protein 1 (RasGAP / p120GAP) | Complex with pl90 RhoGAP (pi90), RasGAP, c-Abl, pl30cas, paxillin; C2 domain of RasGAP | ; Zrihan-Licht et al. (2000) |
| Rho GTPase-activating protein 5 (p190RhoGAP) | Complex with pl90 RhoGAP (pi90), RasGAP, c-Abl, pl30cas, paxillin | Zrihan-Licht et al. (2000) |
| Rhophilin-2 | pUS28-expressing RSMC; IP, tandem MS; low levels | Vomaske et al. (2010) |
| RTEL-1 | pUS28-expressing RSMC; IP, tandem MS | Vomaske et al. (2010) |
| SH3 domain-containing kinase-binding protein 1 (CD2BP3 / SETA / RUK / CIN85) | Complex with SETA/CIN85/Ruk and AIP1; HEK293 cells; co-IP | Schmidt et al. (2003) |
| TCF-4 | pUS28-expressing U373; IP, tandem MS | Vomaske et al. (2010) |
| PTP (TFG) Trk-fused gene | pUS28-expressing RSMC; IP, tandem MS; low levels | Vomaske et al. (2010) |
| TNF receptor-associated factor 4 (Traf4) | Complex with Hic-5 | Wu et al. (2005); |
| Trio | pUS28-expressing RSMC; IP, tandem MS; low levels | Vomaske et al. (2010) |
| Tropomodulin-3 | pUS28-expressing RSMC; IP, tandem MS; low levels | Vomaske et al. (2010) |
| Tropomyosin-a1, a3, a4, -b | pUS28-expressing RSMC; IP, tandem MS; low levels | Vomaske et al. (2010) |
| Tubulin-b-2C | pUS28-expressing RSMC; IP, tandem MS; low levels | Vomaske et al. (2010) |
| USP6 oncogene | pUS28-expressing U373; IP, tandem MS | Vomaske et al. (2010) |
| VEGFR-1 / FLT-1 | Podar et al. (2002) | |
| Vimentin | pUS28-expressing RSMC; IP, tandem MS; low levels | Vomaske et al. (2010) |
Protein partners possibly interacting indirectly with Pyk2.
IP, immunoprecipitation; MS, mass spectrometry; PTK, protein tyrosine kinase; PTP, protein tyrosine phosphatase; RSMC, rectal smooth muscle cells.
Pyk2 Autophosphorylation and Regulation of by Ca2+
Autophosphorylation of Pyk2 and Interactions With Src-Family Kinases
The most striking structural feature of Pyk2 is the presence of a central tyrosine kinase domain and many studies explored its regulation. Activation of protein tyrosine phosphorylation by depolarization and neurotransmitters was reported in neurons in culture and hippocampal slices more than 25 years ago (Siciliano et al., 1994). Two of the main proteins whose phosphorylation was increased were then identified as FAK and Pyk2 (Siciliano et al., 1996). Pyk2 was initially characterized as a Ca2+-activated protein tyrosine kinase (Lev et al., 1995) and also termed calcium-dependent protein-tyrosine kinase (Yu et al., 1996). A remarkable property of FAK and Pyk2 is the existence of an autophosphorylation site in the FERM-kinase linker whose phosphorylation is an early step in the activation of these two proteins. Due to the sequence similarities between the two enzymes, the current model of Pyk2 activation is in part based on results obtained with FAK which are presumed to be also valid for Pyk2. In Pyk2 the autophosphorylated tyrosine is Tyr402, which promotes its interaction with the SH2 domain of Src-family kinases (SFKs) (Li et al., 1999). The SFKs reported to interact with Pyk2 include Src (Dikic et al., 1996; Duong et al., 1998; Kumar et al., 1999; Keely et al., 2000; Sanjay et al., 2001; Faccio et al., 2003; Lakkakorpi et al., 2003; ; Hum et al., 2014) and Fyn (Ganju et al., 1997; Qian et al., 1997; Marie-Cardine et al., 1999; Katagiri et al., 2000; Li and Gotz, 2018), which are both widely expressed in neurons, as well as Lck (Ganju et al., 1997; Qian et al., 1997), Lyn (Yamasaki et al., 2001), and Yes (Sancho et al., 2012). Because the SH2 and SH3 domains involved in the interactions with FAK and Pyk2 are conserved among SFKs, we refer to them below as a generic family, although the detailed interactions have not been documented in all cases. SFKs are also likely to bind to the nearby PR1 motif of Pyk2 through their SH3 domain as it was shown for FAK (Thomas et al., 1998). The binding of SFKs to Pyk2 is expected to activate these enzymes by competing with the intramolecular interactions of SFK including binding of their SH2 domain to an inhibitory phosphotyrosine in their carboxy-terminal region and of their SH3 domain to a motif between the kinase and SH2 domain (Roskoski, 2015; Figure 2). SFKs can phosphorylate several residues in Pyk2, including Tyr579 and Tyr580 in its activation loop, whose phosphorylation is expected to enhance its kinase activity (Li et al., 1999). Pyk2 phosphorylation at Tyr881 can recruit the adaptor Grb2 (Felsch et al., 1998) and the tyrosine kinase Abl (Zrihan-Licht et al., 2004). The phosphorylation of Pyk2 on several tyrosine residues combined with its interaction with multiple partners triggers various signaling pathways, in part depending on the cell type. Phosphorylation of Pyk2 at Tyr402 can result from autophosphorylation and recruit SFKs as outlined above, but SFKs can phosphorylate other residues in Pyk2 independently of Tyr402 (Li et al., 1999) and also directly phosphorylate Tyr402 (Higa-Nakamine et al., 2020; ). This phosphorylation by SFKs may be an indispensable primer for further autophosphorylation in some circumstances (Zhao et al., 2016). Thus there is a clear positive feedforward loop between Pyk2 and SFKs, involving their reciprocal activating interactions. This may favor their strong activation in responses to stimuli, but makes the causal relationship between these events difficult to analyze. Accordingly, in the hippocampus, Fyn plays an important role in Pyk2 tyrosine phosphorylation including at Tyr402, which is markedly decreased in basal conditions and response to stimuli in Fyn KO mice ().
FIGURE 2
The Role of Ca2+ in Pyk2 Activation
The mechanism by which increased intracellular Ca2+ activates Pyk2 is not fully understood but several observations provide some insights. As shown for FAK (Toutant et al., 2002; ) Pyk2 is autophosphorylated by an intermolecular reaction (Park et al., 2004). In inactive Pyk2, the FERM domain is likely to inhibit the kinase domain through an intramolecular interaction as proposed for FAK (Lietha et al., 2007). This interaction may also be involved in oligomer formation which promotes intermolecular autophosphorylation, whereas an excess of free FERM domain decreases autophosphorylation (Riggs et al., 2011). In the case of FAK, the existence of several intramolecular, and potentially intermolecular interactions have been identified (Lietha et al., 2007; ). The FAK FERM domain can dimerize through a tryptophan residue (Trp-266) that is conserved in Pyk2 (Trp-273), providing a basis for an intermolecular interaction favoring trans-autophosphorylation when the intramolecular inhibition of the kinase by the FERM domain is relieved by other factors (). Whether the same scheme applies to Pyk2 and how Ca2+ contributes to relieving the inhibition exerted by the FERM domain and/or facilitates dimerization remains to be determined.
Ca2+-induced autophosphorylation is prevented by calmodulin (CaM) antagonists and direct action of Ca2+/CaM on Pyk2 has been proposed with at least two potential binding sites, one in the FERM domain (including L176-Q177) (Kohno et al., 2008) and another in the kinase domain (L514ERNKNSLKVPTLV) (Xie et al., 2008). The binding of Ca2+/CaM to the FERM domain was reported to facilitate Pyk2 dimerization, providing a potential mechanism for its autophosphorylation (Kohno et al., 2008). However, the molecular mechanisms initiated by Ca2+/CaM binding at these sites leading to intermolecular phosphorylation are not known and the existence of an additional site is plausible (Figure 2). Because Pyk2 interacts with multiple protein partners, Ca2+ can also potentially act on these partners to facilitate Pyk2 intermolecular autophosphorylation through its dimerization or clustering. For example, the SH3 domain of PSD-95 binds the Pyk2 PR3 motif (Seabold et al., 2003) and Ca2+/CaM promotes the dimerization of PSD-95 and thereby activates Pyk2 (). Moreover, CaM is reported to activate Src in the presence or even in the absence of Ca2+ (Stateva et al., 2015).
In addition to a direct implication of Ca2+/CaM, many reports have shown the importance of serine/threonine phosphorylation in Pyk2 regulation. Indeed, Pyk2 activation can be triggered by stimulating PKC and its activation is blocked by PKC inhibitors in various preparations (Siciliano et al., 1994; Lev et al., 1995; Siciliano et al., 1996; Hiregowdara et al., 1997). How PKC activates Pyk2 autophosphorylation is not known and may result from indirect effects, such as activation of Src (). In some cell types, Pyk2 autophosphorylation induced by depolarization but not by G protein-coupled receptor stimulation is prevented by Ca2+/CaM-dependent protein kinase inhibitors (Zwick et al., 1999; Ginnan and Singer, 2002), indicating that this group of kinases is also capable to contribute to Pyk2 activation, directly or indirectly. Finally, inhibition of calcineurin (also known as PP2B or PPP3), a Ca2+- and Ca2+/CaM-activated serine/threonine phosphatase, also prevents depolarization-induced Pyk2 autophosphorylation (Faure et al., 2007). Although calcineurin dephosphorylates pSer778 in Pyk2, this residue is important for nuclear export of Pyk2 but not for Tyr402 phosphorylation (Faure et al., 2013) suggesting the existence of other important sites for Pyk2 activation, on either Pyk2 or other proteins involved in its regulation, including STEP (see Section 4 below). While the mechanistic aspects of Pyk2 regulation by Ca2+ are still imperfectly understood, it is striking that it is a point of convergence of multiple Ca2+-activated pathways, indicating that Pyk2 behaves as a broad sensor of Ca2+ regulation. Other signals activating Pyk2 have been reported without full elucidation of their mechanisms of action, including hyperosmotic shock (Tokiwa et al., 1996; Derkinderen et al., 1998), acidic pH (Li et al., 2004), and SUMOylation (Uzoma et al., 2018), but their relevance in neurons is not known.
Negative Regulation of Pyk2 by Tyrosine Phosphatases and Protocadherins
Termination of Pyk2 activation results from its dephosphorylation by protein tyrosine phosphatases (PTPs). Several PTPs active on Pyk2 have been identified in non-neuronal cells including SHP1 (Kumar et al., 1999), SHP2 (Tang et al., 2000; Halfter et al., 2005), and PTP-PEST (a.k.a. PTPN12) (Davidson and Veillette, 2001; Lyons et al., 2001). In neurons, PTPα decreases Pyk2 phosphorylation either directly or by regulating SFKs (Le et al., 2006), but the phosphatase which appears to play the most prominent role is STEP (also known as protein tyrosine phosphatase non-receptor type 5, PTPN5), which is specifically enriched in the neuronal populations highly expressing Pyk2 (Fitzpatrick and Lombroso, 2011; Lombroso et al., 2016). STEP binds to Pyk2 and catalyzes the dephosphorylation of Tyr402 (Xu et al., 2012). Phosphorylation of Pyk2 Tyr402 is increased in the hippocampus of STEP KO mice (Venkitaramani et al., 2011). STEP is negatively regulated by phosphorylation by cAMP-dependent protein kinase on a key serine residue, and activated by dephosphorylation of this residue by protein phosphatase 1 (PP1 or PPP1) which is itself activated by calcineurin (Goebel-Goody et al., 2012). These phosphorylation-dependent regulations provide an interesting possibility of crosstalk between the cAMP pathway, calcineurin, and Pyk2/SFKs. It could also contribute to the effects of calcineurin inhibitors on the autophosphorylation of Pyk2 (Faure et al., 2007). In addition to tyrosine phosphatases, endogenous inhibitors of Pyk2 have been identified specifically in the central nervous system. Among them, α- and γ-protocadherins were shown to interact with and negatively regulate Pyk2 thereby modulating synaptic connectivity (Suo et al., 2012), neuronal migration (Fan et al., 2018), and cell survival (). Thus the two best characterized negative regulators of Pyk2 are STEP, a phosphatase regulated by multiple signaling pathways and protocadherins.
Dynamics of Pyk2 Localization in Neurons
Pyk2 Accumulation in Post-synaptic Densities
Pyk2 is a cytoplasmic protein that can accumulate at contact or adhesion sites in specific cell types and conditions including podosomes and invadopodia [see (Eleniste and Bruzzaniti, 2012; Genna and Gil-Henn, 2018) for reviews]. In neurons, Pyk2 is rather diffusely distributed but its localization is altered after stimulation (Figure 3A). Following depolarization or activation of glutamate NMDA receptor (NMDAR) Pyk2 is rapidly clustered at post-synaptic sites in spines and this clustering is prevented in the presence of the PSD-95 SH3 domain (). In addition to PSD-95, postsynaptic enrichment of Pyk2 can also be facilitated by its association with other PSD proteins including the SH3 domain of SAP102 (Seabold et al., 2003) and SAPAP3 (). As we shall see below, in the PSD Pyk2 can modify neuronal excitability by inducing the phosphorylation of ion channels (Lev et al., 1995; Felsch et al., 1998; Huang et al., 2001).
FIGURE 3
Pyk2 Cytonuclear Shuttling and Nuclear Accumulation
In addition to its stimulation-induced accumulation in PSDs, Pyk2 also shuttles between the cell nucleus and the cytoplasm (Figure 3B). In various cell lines, Pyk2 accumulates in the nucleus following mutation of Pro-859 to Ala in the PR3 motif or treatment with nuclear export inhibitor leptomycin B (). In transfected cells stimulation of gonadotropin-releasing hormone (GnRH) receptor increases Pyk2 phosphorylation and induces its nuclear accumulation (Farshori et al., 2003) and, during early development, Pyk2 is transiently localized to the nucleus (Meng et al., 2006). In hippocampal slices, neurons in culture, and PC12 cells, depolarization induces a Ca2+/CaM- and calcineurin-dependent nuclear translocation of Pyk2 (Faure et al., 2007). Interestingly, high frequency stimulation of Schaffer collaterals in hippocampal slices induces nuclear accumulation of Pyk2 in CA1 pyramidal neurons (Faure et al., 2007), suggesting it occurs in conditions known to trigger synaptic long-term potentiation (LTP, see below section “Pyk2 in Long Term Potentiation”). Pyk2 contains several nuclear import and export signals (see Figures 1, 3B), including a nuclear export motif regulated by phosphorylation at Ser778, a substrate of cAMP-dependent protein kinase and calcineurin (Faure et al., 2013). Upon depolarization, calcineurin dephosphorylates Ser778 leading to the inactivation of the nuclear export motif and the accumulation of Pyk2 in the nucleus (Faure et al., 2013). The function of Pyk2 in the nucleus remains unclear. Nuclear Pyk2 has the potential to downregulate p53 by increasing p53 ubiquitination through its FERM domain thereby favoring cell survival (Lim et al., 2008a; Lim et al., 2010). In addition, it has been shown in keratinocytes and osteocytes that FAK and Pyk2 interact with methyl-CpG-binding domain protein-2, MBD2 (Schindler et al., 2007; Hum et al., 2014). MBD2 is a methylated-DNA binding protein that recruits histone deacetylase to the DNA (Luo et al., 2009). Interaction with Pyk2 prevents MBD2 association with both HDAC1 and methyl-DNA and thereby increases gene expression (Luo et al., 2009). Whether this regulation also takes place in neurons and whether and how it affects transcription in response to signals that activate Pyk2 is not known. In particular, it will be of interest to determine whether the nuclear role of Pyk2 is targeted to specific genes or is a general modulation that alters responsiveness to more specific pathways. Because it provides a potential link between neuronal activity and transcriptional responses the role of Pyk2 in the nucleus in neurons deserves further investigation including in the context of synaptic plasticity.
Pyk2 in Synapses
Pyk2 in Neurite and Spine Formation and Maintenance
In non-neuronal cells such as osteoclasts, Pyk2 is implicated in the regulation of actin-cytoskeleton downstream of integrins through its interaction with proteins like the Crk-associated substrate p130Cas (also known as breast cancer anti-estrogen resistance protein 1, BCAR1) and paxillin, in a manner similar to FAK [review in Kong et al. (2020)]. Both FAK and Pyk2 are present in neurite growth cones (Menegon et al., 1999). The expression of the C-terminal domain of Pyk2 or FAK blocks neurite outgrowth in PC12 and SH-SY5Y cells indicating the possible implication of the FAK family in this process (Ivankovic-Dikic et al., 2000). Supporting this hypothesis, Pyk2 forms a signaling complex with Cbl, an E3 ubiquitin-protein ligase, and Arg kinase-binding protein 2 (ArgBP2), an adaptor protein, which may regulate actin to form lamellipodia in growth cones of differentiating PC12 cells following growth factor stimulation (Haglund et al., 2004). Pyk2 is also activated and associates with paxillin and bundled actin at neurite initiation sites in PC12 cells in response to nerve growth factor (NGF) (Park et al., 2000). Conversely the activation of GSK3β by Pyk2 in response to lysophosphatidic acid (LPA) contributes to neurite retraction in a neuroblastoma cell line expressing LPA1 receptor (Sayas et al., 2006). These studies in neuronal cell lines indicate that Pyk2 can participate in both neurite formation and retraction.
Studies in neurons have also outlined positive and negative effects of Pyk2 on neurites and spines. Yet it is important to mention that Pyk2 knockout mice do not display any gross defect in brain development (Giralt et al., 2017), indicating that the role of Pyk2 in this context is not major and/or that it can be replaced by FAK. Several results suggest that Pyk2 has a role downstream of integrins, especially β1-integrin, to facilitate spine formation or stability. Pyk2 together with FAK and the p130Cas/Fyn complex downstream of β1-integrin is negatively regulated by EphA4 during spine remodeling (). In orbitofrontal cortex neurons, decreased β1-integrin signaling, which involves Pyk2, results in spine loss (Whyte et al., 2021). Although the role of integrins was not investigated, in Pyk2 KO mice, a decrease in spine number and PSD-95 clusters was observed in the dendrites of pyramidal CA1 hippocampal neurons in vivo and in culture (Giralt et al., 2017). In KO neurons in culture, PSD-95 clusters were rescued by reexpression of Pyk2, requiring its kinase activity, its autophosphorylation, and the presence of its C-terminal region (Giralt et al., 2017). In contrast rescue of spine density required the C-terminal region but neither kinase activity nor autophosphorylation. This latter observation raises the possibility that the positive role of Pyk2 on spines is independent of its kinase activity and recruitment of SFKs through autophosphorylation, but involves other properties of the molecule such as its scaffolding role.
In contrast, several reports provide evidence that Pyk2 can have a negative effect on spines. In hippocampal neurons in culture protocadherins control dendritic development by inhibiting Pyk2 inhibitory effect on small G protein Rac1 activity (Suo et al., 2012). In this study, a negative effect on spines of Pyk2 overexpression was observed. The negative regulation of Rac1 by Pyk2 downstream of protocadherins also impairs neuronal migration (Fan et al., 2018). Similarly, Pyk2 overexpression was shown to decrease spine formation through the inhibitory interaction of Pyk2 with Graf1c, a RhoA GTPase-activating protein (Lee et al., 2019). When Pyk2 is overexpressed or activated, RhoA activity is increased leading to actomyosin contraction and synapse loss (Lee et al., 2019).
Thus the studies of the role of Pyk2 in neuronal cell lines and neurons disclose opposing effects of Pyk2 on neurites and spine formation and/or maintenance. Pyk2 may participate in integrin-adhesion-triggered signaling with a positive effect on spines, whereas its overexpression or potentially its increased activity may result in a dysregulation of small GTPases Rac1 and RhoA leading to spine loss. The intriguing possibility that these two roles of Pyk2 on spines depend on different properties of the molecule will have to be further investigated. At any rate, these results indicate the requirement of tight control of Pyk2 for normal spine regulation.
Role of Pyk2 in the Regulation of Ion Channels
As mentioned above (section “Pyk2 Accumulation in Post-synaptic Densities”), Pyk2 can interact with PSD proteins PSD-95, SAP102, and SAP90/PSD-95-associated protein-3, SAPAP3 (Seabold et al., 2003; ), providing a basis for its enrichment near NMDAR (Figure 4). Moreover, Pyk2 is clustered in PSDs following stimulation of NMDAR (). Tyrosine phosphorylation of PSD-95 itself by SFKs may play a role in the recruitment of Pyk2 (Zhao et al., 2015). PSD-95 and SAP102 are MAGUK proteins (membrane-associated guanylate kinase) so named because one of their domains is similar to guanylate kinases although it is devoid of catalytic activity. These Pyk2-binding proteins encompass several PDZ domains that can bind various post-synaptic proteins including glutamate receptors subunits, in particular those from NMDAR [see (Won et al., 2017) for a review]. Pyk2 was first identified as a component of the NMDAR complex through proteomics (Husi et al., 2000). NMDAR GluN2A and GluN2B subunits COOH-terminal region is phosphorylated at several tyrosine residues by SFKs (Tyr842, −1292, −1325, and −1387 in GluN2A and Tyr1252, −1336, and −1472 in GluN2B) [reviews in Salter and Kalia (2004); Trepanier et al. (2012); Wang et al. (2014)]. The overall effect of these phosphorylations is to increase surface expression and function of the receptor. Accordingly, several reports support the role of Pyk2 in upregulating NMDA currents. The presence of Pyk2 in the patch pipette enhances NMDA currents in hippocampal neurons, an effect that requires its kinase activity (Huang et al., 2001). The activation of Pyk2 is implicated in the upregulation of NMDAR function linked to their increased surface expression, induced by stimulation of metabotropic glutamate receptor 1 (mGluR1) (Heidinger et al., 2002) or of PACAP receptor 1 (Macdonald et al., 2005) as well as in the fast response to glucocorticoids (Yang et al., 2013). Interestingly it was recently shown that the increased number of synaptic NMDAR induced by BDNF results from the enhanced dendritic translation of Pyk2 (). Thus many studies indicate that Pyk2 and associated SFKs increase NMDAR function, an effect implicated in various types of neuromodulatory regulation of these receptors. In Pyk2 KO mice, phosphorylation of GluN2B Tyr1472 was decreased and the levels of NMDAR subunits and PSD-95 associated with PSDs were diminished as compared to wild-type mice (Giralt et al., 2017). It is not known whether Pyk2 phosphorylates NMDAR directly. Evidence suggests that the effects of Pyk2 are mediated by Src because the enhancement of NMDAR activity induced by Pyk2 overexpression is blocked by a Src peptide that does not act on Pyk2 while a dominant-negative mutant of Pyk2 does not affect the potentiation of NMDAR produced by Src activation (Huang et al., 2001). In neurons derived from human induced pluripotent cells, Fyn appears to be the main kinase phosphorylating GluN2B (Zhang et al., 2016). It is thus likely that Src and Fyn are downstream of Pyk2 in the regulation of NMDAR.
FIGURE 4
In contrast to the extensive study of NMDAR phosphorylation, few reports have examined the effects of tyrosine phosphorylation on AMPA receptors (AMPAR). The GluA2 subunit is phosphorylated on Tyr876 near the COOH-terminus by Src and this phosphorylation is increased in response to glutamate agonists (Hayashi and Huganir, 2004). This phosphorylation appears to facilitate activity-induced endocytosis of AMPAR. No alteration in AMPAR was observed in Pyk2 KO mice (Giralt et al., 2017). It is not known whether Pyk2 is implicated in the regulation of GluA2 Tyr876.
In addition to the regulation of glutamate receptors, Pyk2 can also contribute to the regulation of specific potassium channels. Pyk2 is involved in the downregulation of Kv1.2 channels by stimulating their endocytosis, including in response to muscarinic acetylcholine receptors (Chrm1) (Lev et al., 1995; Felsch et al., 1998; Hyun et al., 2013), leading to depolarization and opening of L-type voltage-sensitive Ca2+ channels in smooth muscle cells (
Pyk2 in Synaptic Plasticity
Pyk2 in Long Term Potentiation
Long-term potentiation of synaptic transmission between Schaffer collaterals and CA1 pyramidal neurons of the hippocampus is arguably the most extensively studied form of synaptic plasticity (Nicoll, 2017). This LTP is impaired by tyrosine kinase inhibitors (O’Dell et al., 1991; Huang and Hsu, 1999) and in Fyn KO mice, but not in Src-, Yes-, or Abl-deficient mice (Grant et al., 1992). Yet, acute and specific blockade of Src prevents LTP at the same synapses (Lu et al., 1998). Because depolarization or treatment with glutamate agonists increases the phosphorylation of Pyk2 in neurons in culture and hippocampal slices (Siciliano et al., 1994; Siciliano et al., 1996), it was proposed that Pyk2 could play a role in synaptic plasticity (Girault et al., 1999a). This hypothesis has been tested in various conditions with apparently contradictory results. In CA1 pyramidal neurons of acutely prepared hippocampal slices, the presence of Pyk2 in the whole-cell recording patch pipette enhances synaptic responses through an SFK-dependent mechanism and occludes LTP induced by tetanic stimulation (two 500-ms trains of 100 Hz stimuli, separated by 10 s) (Huang et al., 2001). In this model the presence of kinase-dead Pyk2 prevents LTP induction. Disruption of the interaction between Pyk2 and PSD-95 also abolishes LTP induced by a tetanic stimulation (two 500-ms trains of 100 Hz stimuli, separated by 10 s) at synapses between Schaffer collaterals and CA1 pyramidal neurons in acute hippocampal slices (
Remarkably, the LTP that was blocked by tyrosine kinase inhibitors (O’Dell et al., 1991; Huang and Hsu, 1999), Fyn KO (Grant et al., 1992), or Src inhibition (Lu et al., 1998) was also induced by HFS. In contrast, LTP induced by 40 EPSPs evoked at 1 Hz with depolarization of the postsynaptic cell was not altered in Fyn KO as compared to wild type mice (Grant et al., 1992). This suggests that Pyk2 and tyrosine phosphorylation by SFKs are required for HFS-induced LTP and not for other types of LTP. The specific role attributed to Fyn (Grant et al., 1992) in CA1 is in agreement with the observation that Fyn is the main contributor in Pyk2 regulation in hippocampal slices (
The selective involvement of Pyk2 and SFKs in a specific type of LTP, observed in rather non-physiological conditions after HFS stimulation, raises the question of its biological significance. NMDAR subunit GluN2b phosphorylation at Tyr1472 is increased by HFS in conditions that induce LTP (Huang et al., 2001; Nakazawa et al., 2001), and this phosphorylation is important for LTP induced by HFS (
Pyk2 in Long Term Depression
In addition to its role in LTP, Pyk2 is also involved in the long-term depression (LTD) of synaptic transmission. LTD induced in hippocampal CA1 slices in organotypic culture by pairing 200 pulses at 1 Hz stimulation with depolarization of the postsynaptic cell to −40 mV was blocked by Pyk2 knockdown (Hsin et al., 2010). Similarly, LTD induced at Schaffer collaterals-CA1 synapses by 900 pulses at 1 Hz in slices from Pyk2 KO mice was abolished (Salazar et al., 2019). The molecular mechanisms of the role of Pyk2 in LTD have not been worked out in detail. GluA2 is phosphorylated on Tyr876 by SFKs in a Ca2+-independent manner and not directly by Pyk2 (Hayashi and Huganir, 2004). Tyr876 is located in a region that contains several tyrosine residues and is globally required for regulated AMPAR endocytosis and LTD (
Pyk2 in Intrinsic Excitability Plasticity
The regulation of Kv1.2 by SFKs and Pyk2 can play a role in the regulation of intrinsic excitability plasticity. In CA3 pyramidal neurons, a conditioning train of 20 action potentials (APs) at 10 Hz causes a persistent reduction in the input conductance and an acceleration of the AP onset time, corresponding to LTP of intrinsic excitability (LTP-IE) (Hyun et al., 2013). It depends on back-propagating APs to distal apical dendrites and the presence of Kv1.2 channels. LTP-IE is prevented by the inhibition of Kv1.2 endocytosis or of protein tyrosine kinase activity (Hyun et al., 2013). Although Kv1.2 endocytosis requires its phosphorylation, which is controlled by Pyk2 (Lev et al., 1995; Felsch et al., 1998), the role of Pyk2 in LTP-IE could not be directly confirmed due to interfering effects of Pyk2 knockdown in that preparation (Hyun et al., 2013). In conclusion, Pyk2 is involved in LTP induced by HFS, in LTD, and probably in LTP-IE, but the details of its mechanism of action in these various conditions are not fully elucidated.
Pyk2 in Learning and Memory
The role of Pyk2 in behavior has been investigated using Pyk2-deficient mice. Pyk2 KO mice display a deficit in the spontaneous alternation and the novel object location (NOL) tests (Giralt et al., 2017). These tests explore short-term spatial memory after a single brief training session. Spontaneous alternation evaluates the ability of the animal to remember the previously explored arm of a Y maze 2 h after training. NOL measures the preference for exploring the object displaced among two identical ones, 24 h after a first exposure. In both tests visual cues are provided by geometrical patterns around the apparatus. A similar deficit in NOL was observed in mice with an AAV-induced deletion of Pyk2 in the dorsal hippocampus CA1 region (Giralt et al., 2017). The deficit in NOL was reproduced in other batches of mice from the same KO line and was rescued by targeted bilateral re-expression of Pyk2 in neurons of dorsal hippocampus CA1 (Mastrolia et al., 2021). NOL is a sensitive test that requires the integrity of the dorsal hippocampus [see (
Pyk2 in Brain Diseases
Epilepsy
Given the activation of Pyk2 following stimulation of glutamate receptors, neuronal depolarization, and increased intracellular free Ca2+, it is not surprising that its phosphorylation on Tyr402 and other residues is increased following electroconvulsive shock (Jeon et al., 2001), more strongly than that of FAK (Kang et al., 2004). Tyrosine phosphorylation of NMDAR and PSD-associated Pyk2 increases in the hour following pilocarpine-induced status epilepticus and decreases subsequently (Niimura et al., 2005). Accordingly, neuronal pPyk2-immunofluorescence was decreased as compared to control mice 6 h after kainic acid-induced seizures, but, interestingly, appeared in activated microglia at 72 h (Tian et al., 2000). These results indicate the existence of early and transient activation of Pyk2 in neurons following seizures and a delayed activation in microglia. Microglial cells are the brain-resident form of macrophages, a cell type in which Pyk2 is known to play an important role (
Ischemia
Another condition in which strong stimulation of glutamate receptors occurs is brain ischemia. Pyk2 is rapidly enriched in PSDs following global transient brain ischemia in the rat (
Huntington’s Disease
Huntington’s disease (HD) is characterized by motor and behavioral symptoms as well as cognitive decline leading to death. HD is an autosomal dominant alteration caused by the expansion of a CAG repeat in the human huntingtin gene (HTT) resulting in an extended poly glutamine sequence in the N-terminal part of the huntingtin protein which alters its stability and function [review in Saudou and Humbert (2016)]. Wild-type huntingtin and Pyk2 interact with the same SH3 domain of PSD-95 (Sun et al., 2001; Seabold et al., 2003). Poly glutamine extension alters Htt binding to PSD-95 and increases tyrosine phosphorylation of GluN2B by SFKs possibly facilitating neurotoxicity (Sun et al., 2001; Song et al., 2003). Pyk2 levels are decreased in the hippocampus of patients with HD and in R6/1 mice (Giralt et al., 2017), which overexpress an N-terminal fragment of human Htt with expanded glutamine (Mangiarini et al., 1996). The decrease in Pyk2 expression is likely to result, at least in part, from transcriptional alterations since its mRNA is also diminished [(Runne et al., 2008) and al Massadi et al. in preparation]. R6/1 mice display synaptic alterations in the hippocampus reminiscent of those in Pyk2 KO mice (Giralt et al., 2017). Pyk2 overexpression in the hippocampus of these mice improved their memory deficits, spine pathology, and PSD-95 mislocalization, but not LTP alterations. It is thus likely that the Pyk2 deficit in the hippocampus contributes to some aspects of cognitive impairments in HD, which can potentially be improved by Pyk2 increased expression. Similar decreases in Pyk2 protein and mRNA levels are found in the putamen of HD patients and the striatum of R6/1 and R6/2 mouse models (al Massadi et al. in preparation). However, it is not known whether this deficit contributes to the phenotype. Interestingly, the levels of STEP, the phosphatase that inactivates Pyk2, are also decreased in patients and mouse models of the disease, and its phosphorylation on serine is increased, indicating inhibition of STEP activity (Saavedra et al., 2011). This was interpreted as a possible compensatory mechanism that could increase neuronal resistance to excitotoxicity. In support of this hypothesis, genetic deletion of STEP delayed the onset of motor dysfunction and prevented the appearance of cognitive deficits in R6/1 mice, and acute pharmacological inhibition of STEP with TC-2153 improved cognitive function in these mice (Garcia-Forn et al., 2018). Although STEP has other targets that can mediate these effects, including ERK, it is tempting to propose that decreasing the negative control exerted by STEP on Pyk2 and the associated SFKs contributes to the beneficial effects of STEP inhibitors and reinforces their therapeutic interest.
Alzheimer’s Disease
Several lines of evidence implicate Pyk2 at multiple levels in Alzheimer’s disease (AD) and AD mouse models. The first line of evidence comes from human genetic studies. A large genome-wide association (GWAS) meta-analysis identified the PTK2B gene as a locus associated with late-onset AD (Lambert et al., 2013). This finding was replicated in several other studies (
Alzheimer’s disease hallmarks include amyloid plaques, neurofibrillary tangles, and glial responses as well as “negative” lesions including neuronal and synaptic loss (Serrano-Pozo et al., 2011). Extracellular amyloid plaques are comprised of β-amyloid peptide Aβ1–42, the amyloidogenic and toxic fragment of the amyloid precursor protein APP, while neurofibrillary tangles are aggregates of hyperphosphorylated microtubule-binding protein Tau. Data from several laboratories indicate multiple levels at which Pyk2 could be involved in the course of the disease. The group of Strittmatter provided strong evidence that Pyk2 participates in a cascade triggered by oligomeric Aβ (Aβo), the major toxic form of Aβ [review in
FIGURE 5

Possible roles of Pyk2 in Alzheimer’s disease. (A) Pyk2 is likely to be a component of the amyloid cascade mechanisms. Pyk2 can be associated with the complex between mGluR5 and Prpc, associated with homer. The binding of Aβ oligomers (Aβo) to Prpc, a glycosylphosphatidylinositol-anchored extracellular protein, impairs normal signaling of mGluR5 but triggers the activation of Fyn and Pyk2. These kinases phosphorylate Tau and may thus facilitate its aggregation and the formation of neurofibrillary tangles. Pyk2 also phosphorylates the RhoA GTPase Graf1c, inhibiting its activity, increasing active RhoA/GTP, resulting in activation of Rock2 and actin/myosin contraction that can contribute to synaptic alterations [see references in the text and (
Pyk2 is also linked with tauopathy since Tau is a substrate of Fyn (Lee et al., 2004;
Other evidence sheds a different light on the role of Pyk2 and suggests it may be more complex than anticipated based on its contribution to the pathogenic cascades (Figure 5B). It was first proposed that the scaffolding protein Ran-binding protein 9 (RanBP9), which is markedly increased in AD brains, promotes Aβ1–42 generation by scaffolding APP/BACE1/LRP complexes together and accelerating APP endocytosis through a mechanism that involves disruption of Pyk2/paxillin signaling (Woo et al., 2012). When 5XFAD mice, which express transgenic human APP and PSEN1 with several mutations [APPSwe, I716V (Florida), V717I (London) and PSEN1 M146L, L286V (Oakley et al., 2006)] were crossed with Pyk2 KO mice, their behavioral and histological phenotypes were not improved, except for a small decrease in plaque number (Giralt et al., 2018). In 5XFAD mice, Pyk2 Tyr402 phosphorylation levels in the hippocampus were reduced and overexpression of Pyk2 in this brain region rescued autophosphorylated Pyk2 levels and improved synaptic markers and performance in several behavioral tasks, despite a slight increase in plaque number (Giralt et al., 2018). The presence of a potentially toxic proteolytic fragment of Src was observed in 5XFAD and Pyk2 KO mice, which was corrected by Pyk2 viral expression (Giralt et al., 2018). In further support of the positive role of Pyk2, its overexpression in hippocampal neurons in a microfluidic culture system also protected these neurons from Aβ1–42 toxicity (Kilinc et al., 2020). These results suggest that in some conditions a functional deficit of Pyk2 could play a role in AD model. The possible positive effects of increasing Pyk2 expression/phosphorylation are in agreement with the effects of inhibition of STEP, its main phosphatase. Aβ enhances STEP activity, through a mechanism that involves α7 nicotinic acetylcholine receptor and calcineurin (PP2B) activation leading to dephosphorylation and decreased surface expression of NMDAR (Snyder et al., 2005). Moreover, STEP levels are increased in an AD mouse model and in human cortical samples (
An additional level of complexity comes from the role of Pyk2 in microglial cells that are an important player in AD (Saez-Atienzar and Masliah, 2020). In a culture system, Pyk2 is involved, downstream of PKC, in the secretion of neurotoxic factors by microglia stimulated by Aβ (
In conclusion, Pyk2 is in a position to play multiple roles in AD mouse models and possibly in late-onset AD in human patients. In neurons, Pyk2 in interaction with Fyn is a mediator of Aβ toxicity and can link Aβ effects with Tau aberrant phosphorylation, making it a potential key player in the amyloid cascade. On the other hand, a functional deficit in Pyk2, possibly related to an enhanced STEP activity, may contribute to some aspects of the functional deficits in mouse models of AD. It remains to be established which of these two opposing mechanisms are predominant depending on the experimental model and conditions and whether they play a role in human patients. Finally, the possible contribution of Pyk2 in microglia to the pathogenic mechanism of AD needs to be further investigated. It is tempting to suggest that depending on the genetic variants of PTK2B, slight changes in its expression regulation may favor one arm or the other of these multiple aspects of Pyk2 role. These questions have practical importance for future therapeutic developments since selective inhibitors of Pyk2 are being developed and could constitute useful therapeutic tools, as well as, but in the opposite direction, inhibitors of STEP, which indirectly increase Pyk2 function.
Parkinson’s Disease
The protein which is the main component of Lewy bodies and plays a key role in the neurodegeneration in Parkinson’s disease, α-synuclein, is phosphorylated by SFKs, including Fyn, on several residues, mostly Tyr125 (Ellis et al., 2001; Nakamura T. et al., 2001). This phosphorylation is increased in response to hyperosmotic shock through activation of Pyk2 (Nakamura et al., 2002) and inhibited by a Pyk2/RAFTK-associated protein (PRAP) that binds to Pyk2 PR3 motif through its SH3 domain (Takahashi et al., 2003). Phosphorylation of α-synuclein at Tyr125 is a priming event for phosphorylation of Ser129 by protein kinase CK1, a site predominantly phosphorylated in Lewy bodies (Kosten et al., 2014). However, Tyr125 phosphorylation has been proposed to have a neuroprotective role in a drosophila model of synucleinopathy (
Psychiatric Disorders and Drug Addiction
A few studies associated Pyk2 with chronic stress damage and depressive disorders. In the lateral septum, Pyk2 phosphorylation decreases following stress exposure, and enhancing Pyk2 expression prevents the active avoidance deficit caused by exposure to inescapable shock, suggesting an antidepressant role (Sheehan et al., 2003). In the rat prefrontal cortex, imipramine, an antidepressant drug that blocks the reuptake of monoamine neurotransmitters, activates a pathway involving Pyk2 activation and ERK phosphorylation (Zalewska et al., 2016). In major depression in humans and in a mouse chronic stress model, a decrease in the nuclear pore protein NUP62 transcript was reported (Kinoshita et al., 2014). NUP62 is phosphorylated by Pyk2, facilitating its dissociation from the nuclear pore, and pTyr402-Pyk2 accumulates in the perinuclear space of CA3 hippocampal neurons following chronic stress in the rat (Kinoshita et al., 2014). Therefore the authors proposed that Pyk2 activation and the subsequently decreased function of NUP62 participate in the phenotype possibly by altering the dendritic arbor complexity. Pyk2 has also been implicated in a mouse model of depressive state induced by chronic unpredictable mild stress (CUMS) (Montalban et al., 2019). In Pyk2 KO mice, anxiety and anhedonia induced by CUMS were less pronounced than in wild-type littermates whereas another phenotype (struggling in the forced swimming test) was not altered. This improvement of behavioral consequences of CUMS observed in constitutive KO mice was mimicked by a bilateral targeted deletion of Pyk2 in the amygdala (Montalban et al., 2019). A possible explanation of the beneficial effect of Pyk2 deletion in this model is that it specifically prevents the stress-induced synaptic plasticity in the amygdala, which leads to the depressive-like phenotype.
Another common brain disorder extensively studied in animals is addiction. Chronic exposure to cocaine was shown to increase Pyk2 levels in primate nucleus accumbens (Freeman et al., 2001) and rat frontal cortex (Freeman et al., 2002) leading to the idea of a possible implication of Pyk2 in addiction. A neuroprotective role of Pyk2 has been described in rats receiving moderate ethanol preconditioning (Mitchell et al., 2016). This preconditioning induces neuroprotection against oxidative stress possibly involving a Pyk2/NMDAR pathway leading to the elevation of an antioxidant protein, peroxiredoxin 2 (Prx2). The acute locomotor effects of cocaine injection are decreased in Pyk2 KO mice as compared to wild-type (de Pins et al., 2020). Targeted deletions suggest that this effect results from the absence of Pyk2 in the dopamine D1 receptors-expressing neurons of the nucleus accumbens. In contrast, behavioral alterations that result from cocaine effects on neuronal plasticity, locomotor sensitization, and conditioned place preference were normal in Pyk2 mutant mice (de Pins et al., 2020). A recent study in mice showed that cocaine self-administration triggers a loss of dendritic spines on orbitofrontal cortex excitatory neurons (Whyte et al., 2021). The authors provide evidence that β1-integrin plays a key role in stabilizing spines and that the behavioral effects of cocaine are counterbalanced by Pyk2 overexpression. These results suggest that Pyk2 participates in spines stabilization downstream of β1-integrin regulating drug self-administration and possibly other effects. Thus the few studies on the role of Pyk2 in depression and addiction models suggest that it may play a role by supporting plasticity in specific brain regions, with either negative behavioral consequences when it involves amygdala in stress-induced depression, or positive ones when it takes place in orbitofrontal cortex in addiction.
Pyk2 in Astrocytes and Glioma
Astrocytes have critical importance in the nervous tissue and are directly involved in synaptic function. Pyk2 is expressed in astrocytes where it can be activated by endothelin-1 (
Beyond these roles in normal astrocytes, Pyk2 implication in astroglial tumors has attracted a lot of attention and the detailed description of the results is beyond the scope of this review. Pyk2 has been implicated in various cancer types in which it constitutes an interesting therapeutic target [review in Zhu et al. (2018)]. Protein levels of Pyk2 are increased in invasive glioblastoma cells (Hoelzinger et al., 2005) and expression levels are associated with the migration capacity of human glioblastoma cells whereas FAK activity is linked to proliferation (Lipinski et al., 2003). siRNA knockdown of Pyk2 further confirmed the central role of Pyk2 in the migration of glioblastoma cells (Lipinski et al., 2005; Rolon-Reyes et al., 2015). The interaction between Pyk2 and MAP4K4 (mitogen-activated protein kinase-kinase-kinase-kinase 4) was shown to be decisive in this function (Loftus et al., 2013). Interestingly, melatonin could be a potential therapeutic molecule able to reduce Pyk2 activation and, thus, inhibit tumor cell migration/invasion (Xu et al., 2015). In neuroblastoma, Pyk2 may also play an important role as it was shown that TRPM2 expression increases the viability of neuroblastoma through a pathway involving Pyk2 activation (Hirschler-Laszkiewicz et al., 2018). Taken together, these results indicate that Pyk2 could be a potential target for glioma and neuroblastoma therapies.
Pyk2 Inhibitors
Pyk2 like FAK has been implicated in various cancers in which it contributes to increase cell viability or migration by activating various oncogenic pathways and the expression level of these two proteins is often associated with poor prognosis [reviews in Sulzmaier et al. (2014); Zhu et al. (2018)]. Therefore much effort has been devoted to the identification of small molecules capable to inhibit these kinases and several compounds are undergoing clinical trials in cancer. The inhibitors usually target the ATP binding site and because of the high degree of structural conservation between FAK and Pyk2, most bind to and inhibit the two kinases. However, several compounds have been reported to display a certain degree of selectivity for Pyk2 including PF-4618433 (Han et al., 2009) and PF-719 (Tse et al., 2012). However, given the diversity and importance of FAK functions, this low selectivity is likely to hamper the clinical exploration of such inhibitors in conditions other than cancers with poor prognosis. The design of compounds targeting other regions of Pyk2 or FAK could lead to more specific inhibitors or molecules interfering only with specific properties of these multifunctional proteins with multiple partners (Walkiewicz et al., 2015). This is an open area for research, which could also lead to compounds enhancing some functions of Pyk2. In this respect, the only current way to pharmacologically enhance Pyk2 function, albeit non-specifically, is to inhibit the phosphatases responsible for its dephosphorylation, especially STEP in brain neurons (Xu et al., 2014;
Conclusion
Pyk2 is highly expressed and has important cellular and physiological functions in the central nervous system. Its presence is not necessary for the basic functioning of the brain that is grossly normal in Pyk2 KO mice, which grow and breed normally in animal facility conditions. In addition and in contrast to FAK, Pyk2 levels in the rodent brain increase dramatically in the post-natal period pointing to a more specific role in the late development or in adult brain than during early development. Convergent evidence shows that Pyk2 is involved in specific aspects of synaptic functions and plasticity. However Pyk2 signaling intervenes in multiple pathways, and has therefore multiple functions with in some cases opposing effects. Thus, depending on models and experimental conditions it can facilitate or inhibit neurite and dendritic spine formation. Pyk2 is also a component of the complex signaling machinery that regulates NMDAR in the post-synaptic region. As such it appears necessary for LTD and specific types of LTP, as well as for single-trial spatial memory. Multiple lines of evidence also point to the role of Pyk2 in pathological conditions. This role appears to be multifaceted with sometimes apparently opposite contributions to the pathology in mouse models. Pyk2 activation may contribute to the neurotoxic consequences of epilepsy and ischemia. Pyk2 levels or activity may be deficient in some neurodegenerative conditions such as in HD or AD, where this deficit can contribute to alterations in synaptic functions and behavior that are improved by expression of Pyk2 or inhibition of the major Pyk2 phosphatase STEP. In contrast, Pyk2 appears to be a key component in the cascade of events triggered by Aβ in models of Alzheimer’s disease where it may provide a link between amyloid toxicity and tauopathy. In addition, Pyk2’s enrichment in cells of the macrophage lineage including in activated microglia raises the possibility of its contribution to the neuroinflammatory component of various conditions including epilepsy, ischemia, and neurodegenerative diseases. In cancer in general and in glioblastoma in particular Pyk2 contributes to tumor cells’ malignancy, particularly by facilitating their mobility, indicating the potential therapeutic benefit of Pyk2 inhibitors in combination with other drugs. Since in neurological and psychiatric conditions the role of Pyk2 may include positive as well as deleterious aspects, it is important to precisely evaluate its contribution, including ultimately in humans, to balance the potential benefit of its pharmacological inhibition or its possible enhancement, including through the manipulation of tyrosine phosphatases such as STEP.
Publisher’s Note
All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.
Statements
Author contributions
All authors listed have made a substantial, direct and intellectual contribution to the work, and approved it for publication.
Funding
Work in the J-AG’s lab was supported by Inserm, Sorbonne Université, and grants from Agence Nationale de la Recherche (ANR-19-CE16-0020), FRM (EQU201903007844), and Inserm-Transfert COPOC. BP was supported by the FRM, FDT201805005390.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
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Summary
Keywords
signal transduction, protein phosphorylation, glutamate receptors, learning and memory, neurodegenerative diseases
Citation
de Pins B, Mendes T, Giralt A and Girault J-A (2021) The Non-receptor Tyrosine Kinase Pyk2 in Brain Function and Neurological and Psychiatric Diseases. Front. Synaptic Neurosci. 13:749001. doi: 10.3389/fnsyn.2021.749001
Received
28 July 2021
Accepted
14 September 2021
Published
06 October 2021
Volume
13 - 2021
Edited by
Emmanuel Valjent, Centre National de la Recherche Scientifique (CNRS), France
Reviewed by
John Q. Wang, University of Missouri-Kansas City, United States; Paulo S. Pinheiro, University of Coimbra, Portugal
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© 2021 de Pins, Mendes, Giralt and Girault.
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*Correspondence: Jean-Antoine Girault, jean-antoine.girault@inserm.fr
†Present address: Benoit de Pins, Department of Plant and Environmental Sciences, Weizmann Institute of Science, Rehovot, Israel
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