REVIEW article

Front. Genet., 04 February 2025

Sec. RNA

Volume 16 - 2025 | https://doi.org/10.3389/fgene.2025.1524449

Systematic review and meta-analysis of the impact of abnormal expression of long non coding RNA on the prognosis of acute myeloid leukemia

  • 1. Graduate School, Inner Mongolia Medical University, Hohhot, China

  • 2. Inner Mongolia Autonomous Region People’s Hospital, Hohhot, China

  • 3. Graduate School, Baotou Medical College, Inner Mongolia University of Science and Technology, Baotou, China

Abstract

Objective:

Long non-coding RNA (lncRNA) is aberrantly expressed in a variety of tumor diseases. To date, its specific role in acute myeloid leukemia (AML) has not been fully elucidated. This study aims to evaluate the association between aberrant lncRNA expression and poor prognosis in AML patients, and to systematically assess the relationship between aberrant lncRNA expression and AML prognosis.

Methods:

We conducted a comprehensive literature search in PubMed, Embase, Cochrane Library, CNKI (China National Knowledge Infrastructure), WanFang (China Wanfang Database), VIP (China VIP Database), and Sinomed (China Biomedical Literature Database) to identify relevant Chinese and English articles. The search period covered from the inception of these databases to 4 August 2024. Articles were screened according to predefined inclusion and exclusion criteria, and meta-analysis was performed using Stata.

Results:

A total of 25 articles were included in the analysis. Aberrant lncRNA expression was significantly associated with reduced overall survival (univariate HR = 2.46, 95%CI 2.11–2.88, P < 0.001; multivariate HR = 2.46, 95%CI 2.11–2.88, P < 0.001), event-free survival (HR = 1.51, 95%CI 1.19–1.90, P = 0.001), recurrence-free survival (HR = 2.82, 95%CI 2.03–3.91, P < 0.001), and disease-free survival (HR = 2.390, 95%CI 1.037–5.507, P = 0.041). These findings were statistically significant. The 25 articles collectively identified 22 lncRNAs whose aberrant expression was associated with AML prognosis. Notably, multiple studies highlighted the aberrant expression of lncRNA CRNDE, ZEB2-AS1, and TUG1 as being particularly relevant to AML prognosis. Our meta-analysis revealed that high expression of lncRNA CRNDE and TUG1 was associated with reduced overall survival, while high expression of lncRNA ZEB2-AS1 was linked to decreased disease-free survival, both with statistically significant differences.

Conclusion:

The expression levels of lncRNAs are closely associated with the prognosis of AML patients and may serve as important indicators for monitoring prognosis in the future. However, further high-quality studies are needed to validate these findings.

1 Background

Acute myeloid leukemia (AML) is one of the most common malignant diseases in the hematological system, characterized by the malignant proliferation of hematopoietic stem cells. It predominantly affects adults and is estimated to be the 11th most common cancer globally (Döhner et al., 2015; Sasaki et al., 2021). Despite significant advancements in AML treatment, including intensive chemotherapy, allogeneic stem cell transplantation, and targeted therapy, which have gradually become the primary treatment modalities and have achieved certain outcomes, the prognosis of AML remains poor, with a 5-year survival rate of less than 25% (Liu, 2021; Rm et al., 2019). Consequently, improving the prognosis of AML has become a key focus for many researchers. Since the European LeukemiaNet (ELN) introduced a method for predicting AML patient prognosis based on cellular and genetic abnormalities in 2017, numerous scholars have been dedicated to identifying indicators for monitoring AML prognosis (Liu, 2021; Döhner et al., 2017). In recent years, long non-coding RNA (lncRNA), an RNA molecule longer than 200 nucleotides that does not code for proteins, has gained attention due to its abnormal expression in various human diseases. LncRNAs regulate gene expression through mechanisms such as epigenetic modification, transcription, and post-transcriptional regulation, and play a role in the development of multiple diseases (Lu et al., 2024). Multiple studies have demonstrated that lncRNAs play a significant role in the pathogenesis of AML (7–31) and show substantial value in diagnosis, prognosis monitoring, and targeted therapy. However, the relationship between lncRNA dysregulation and AML prognosis remains controversial. Therefore, this study aims to use meta-analysis to investigate the evidence-based relationship between lncRNA dysregulation and AML prognosis, providing references for risk stratification and treatment of AML.

2 Materials and methods

2.1 Document retrieval

Search the Chinese and English databases, including PubMed, Embase, Cochrane Library, China National Knowledge Infrastructure (CNKI), Wanfang Data Knowledge Service Platform, VIP Database, and China Biomedical Literature Service (SinoMed). Additionally, perform manual searches to obtain relevant literature to the greatest extent possible. The search period ranges from the establishment of the databases to 4 August 2024. The Chinese search terms include “lncRNA,” “acute myeloid leukemia,” and “prognosis.” For the English search terms, a combination of subject headings and free text terms is used, with subject headings including “lncRNA,” “acute myeloid leukemia,” and “prognosis.” An example of the PubMed search strategy is provided in Table 1.

TABLE 1

Search orderSearches
#1((((((((((((((((((((((((((((“RNA, Long Noncoding” [Mesh]) OR (Noncoding RNA, Long)) OR (RNA, Long Untranslated)) OR (Long Untranslated RNA)) OR (Untranslated RNA, Long)) OR (lncRNA)) OR (Long ncRNA)) OR (ncRNA, Long)) OR (Long ncRNAs)) OR (ncRNAs, Long)) OR (Long Non-Coding RNA)) OR (Long Non Coding RNA)) OR (Non-Coding RNA, Long)) OR (RNA, Long Non-Coding)) OR (RNA, Long Non-Coding)) OR (Long Non-Protein-Coding RNA)) OR (Long Non Protein Coding RNA)) OR (Non-Protein-Coding RNA, Long)) OR (RNA, Long Non-Protein-Coding)) OR (Long Noncoding RNA)) OR (RNA, Long Non-Translated)) OR (Long Non-Translated RNA)) OR (Non-Translated RNA, Long)) OR (RNA, Long Non Translated)) OR (Long Intergenic Non-Protein Coding RNA)) OR (Long Intergenic Non Protein Coding RNA)) OR (LincRNA)) OR (LINC RNA)) OR (LincRNAs)
#2(((((“Prognosis”[Mesh]) OR (Prognoses)) OR (Prognostic Factors)) OR (Prognostic Factor)) OR (Factor, Prognostic)) OR (Factors, Prognostic)
#3(((((((((((((((((((((((((((((((((((((((((((((((“Leukemia, Myeloid, Acute”[Mesh]) OR (Leukemia, Acute Myeloid)) OR (Acute Myelogenous Leukemia)) OR (Acute Myelogenous Leukemias)) OR (Leukemias, Acute Myelogenous)) OR (Myelogenous Leukemias, Acute)) OR (Leukemia, Acute Myelogenous)) OR (Myelocytic Leukemia, Acute)) OR (Acute Myelocytic Leukemia)) OR (Acute Myelocytic Leukemias)) OR (Leukemia, Acute Myelocytic)) OR (Leukemias, Acute Myelocytic)) OR (Myelocytic Leukemias, Acute)) OR (Leukemia, Myelocytic, Acute)) OR (Leukemia, Myeloblastic, Acute)) OR (Myeloblastic Leukemia, Acute)) OR (Acute Myeloblastic Leukemia)) OR (Acute Myeloblastic Leukemias)) OR (Leukemia, Acute Myeloblastic)) OR (Leukemias, Acute Myeloblastic)) OR (Myeloblastic Leukemias, Acute)) OR (Leukemia, Myelogenous, Acute)) OR (Myelogenous Leukemia, Acute)) OR (ANLL)) OR (Nonlymphocytic Leukemia, Acute)) OR (Acute Nonlymphocytic Leukemia)) OR (Acute Nonlymphocytic Leukemias)) OR (Leukemia, Acute Nonlymphocytic)) OR (Leukemias, Acute Nonlymphocytic)) OR (Nonlymphocytic Leukemias, Acute)) OR (Leukemia, Nonlymphocytic, Acute)) OR (Leukemia, Nonlymphoblastic, Acute)) OR (Nonlymphoblastic Leukemia, Acute)) OR (Acute Nonlymphoblastic Leukemia)) OR (Leukemia, Acute Nonlymphoblastic)) OR (Leukemias, Acute Nonlymphoblastic)) OR (Nonlymphoblastic Leukemias, Acute)) OR (Acute Myeloid Leukemia)) OR (Acute Myeloid Leukemias)) OR (Leukemias, Acute Myeloid)) OR (Myeloid Leukemias, Acute)) OR (Myeloid Leukemia, Acute)) OR (Myeloid Leukemia, Acute, M1)) OR (Leukemia, Myeloid, Acute, M1)) OR (Acute Myeloid Leukemia without Maturation)) OR (Leukemia, Myeloid, Acute, M2)) OR (Acute Myeloid Leukemia with Maturation)) OR (Myeloid Leukemia, Acute, M2)
#4#1 OR #2 OR #3

Pubmed search strategy.

2.2 Criteria for inclusion and exclusion

2.2.1 Inclusion criteria

  • 1. Study Subjects: Healthy individuals or patients with benign diseases as the control group, and patients with acute myeloid leukemia (AML) as the case group (age of study subjects ≥14 years).

  • 2. Research Content: Studies examining the prognostic correlation of lncRNA in tissue specimens and AML.

  • 3. Research Type: Cohort studies.

  • 4. Outcome Indicators: Studies must report overall survival (OS), event-free survival (EFS), relapse-free survival (RFS), and disease-free survival (DFS). Hazard ratios (HR) and their 95% confidence intervals (CI) must be either directly extractable or indirectly extractable from survival curves, along with the type, expression level, and cutoff value of lncRNA.

2.2.2 Exclusion criteria

  • 1. Studies published repeatedly or in different languages.

  • 2. Review articles, conference papers, dissertations, and other non-primary research articles.

  • 3. Studies with incomplete data or where the full text is unavailable.

  • 4. Research content not related to the topic.

  • 5. Studies where outcome indicators do not meet the specified criteria or cannot be extracted.

2.3 Screening of literature and extraction of data

The retrieved literature was independently screened and included by two researchers in strict adherence to the inclusion and exclusion criteria. In the event of disagreement, a third researcher would arbitrate the decision. The data to be extracted included: ① authors, publication year ② study region ③ sample size ④ detection method ⑤ type, expression level, and cutoff value of lncRNA ⑥ source of samples ⑦ disease type and stage ⑧ follow-up time ⑨ outcome indicators ⑩ source of HR extraction, etc.

2.4 Evaluation of literature quality

For the included cohort studies, the authors will employ the Newcastle-Ottawa Scale (NOS) to assess the quality of the literature. Studies scoring ≥6 on the NOS will be considered high-quality and deemed suitable for inclusion in the meta-analysis.

2.5 Statistical approaches

Meta-analysis was conducted using Stata16SE software, and the results were presented in a forest plot. The relationship between lncRNA and the prognosis of AML patients was assessed using the combined effect size (HR) and its corresponding 95% CI values. To evaluate the heterogeneity of the studies, the authors used the Q test and the I2 statistic. If the test results indicated I2 < 50% and P > 0.05, it suggested low heterogeneity, and a fixed-effects model was applied; if the test results showed I2 > 50% and P ≤ 0.05, it indicated substantial heterogeneity, and a random-effects model was used. Sensitivity analysis was performed for studies with significant heterogeneity, and subgroup analysis was conducted to explore the sources of heterogeneity. When the number of studies included in the outcome measure exceeded 10, Begg’s test and Egger’s test were employed to assess publication bias.

3 Results

3.1 Results of literature screening

After conducting the search in strict accordance with the inclusion and exclusion criteria, 826 Chinese and English articles were retrieved. After eliminating 283 duplicates, 62 articles were initially selected based on the abstracts and titles. Finally, 25 articles were included after reviewing the full texts (Figure 1).

FIGURE 1

3.2 The basic characteristics of the included literature and the quality evaluation of NOS

A total of 25 articles were included, with the research period spanning from 2015 to 2024. The research regions included China (20 articles), Egypt (3 articles), and Iran (2 articles). A total of 2,372 patients diagnosed with AML were involved in these studies. The studies examined 22 types of lncRNAs, and the detection method used in all studies was qRT-PCR. The NOS scores of all studies were ≥6 points, indicating their suitability for inclusion in the meta-analysis. The specific details are presented in Table 2.

TABLE 2

AuthorYearRegionTypeSample sizeTest methodlncRNA types and expression levelsCut-offSource of MaterialsDisease type and stagingOutcome indicatorsSource of HR and 95% CI extractionNOS score
Ma and Li (2024)2024CNR47qRT-PCRHEIH↑meanBMinitial diagnosis,non-M3OSKM curve6
Lu et al. (2022)2022CNR73qRT-PCRFOXD3-AS1↑ROCBMinitial diagnosis,non-M3OSKM curve6
Zou and Wang (2024)2024CNR120qRT-PCRDANCR↑
SNHG7↑
meanPBnot mentionOSKM curve6
He et al. (2022)2022CNR87qRT-PCRMALAT-1↑meanPBinitial diagnosisOSKM curve6
Wang et al. (2023a)2023CNR88qRT-PCRXIST↑meanPBnot mentionOSText6
Shan et al. (2022)2022CNR116qRT-PCRHOXA-AS2↑meanPBinitial diagnosisOSText6
Wang et al. (2023c)2023CNR106qRT-PCRCRNDE↑meanPBinitial diagnosis,non-M3OSText6
Huang et al. (2017)2017CNR56qRT-PCRMALAT-1↑medianBMinitial diagnosis (M5)OSText7
Abdelrahman et al. (2023)2023EGR80qRT-PCRZEB2-AS1↑ROCBMinitial diagnosisDFSText7
Gamaleldin et al. (2021)2021EGP100qRT-PCRANRIL↑
SNHG14↑
medianBMinitial diagnosis,non-M3OS/RFSText7
Shi et al. (2019)2019CNR42qRT-PCRZEB2-AS1↑upper quartileBMinitial diagnosisOS/DFSText7
Qu et al. (2020)2020CNR108qRT-PCRHOXA-AS2↑medianBMnot mentionOS/RFSText7
Wu et al. (2015)2015CNR85qRT-PCRHOTAIR↑medianBM/PBnot mentionOSText7
Yang et al. (2018)2018CNR119qRT-PCRPANDAR↑ROCBMinitial diagnosisOSText7
Pashaiefar et al. (2018)2018IRR64qRT-PCRIRAIN↓medianBMinitial diagnosis,non-M3OS/RFSText7
Luo et al. (2018)2018CNP73qRT-PCRTUG1↑medianBMRecurrent or refractoryOSText7
Wang et al. (2018)2018CNP186qRT-PCRTUG1↑medianBMinitial diagnosis,non-M3OS/EFSText7
Li and Sun (2018)2018CNR194qRT-PCRSNHG5↑medianBM/PBinitial diagnosisOSText7
Wang et al. (2023b)2023CNR72qRT-PCRRBM5-AS1↑meanBMAMLOSText7
Zhou et al. (2020)2020CNR76qRT-PCRNEAT1↑meanPBAMLOSText7
Jia et al. (2018)2018CNR48qRT-PCRKCNQ1OT1↑meanPBAMLOSText6
Bai et al. (2024)2024CNR50qRT-PCRUCA1↑medianBMAMLOSText7
Hola et al. (2021)2021EGR200qRT-PCRCRNDE↑medianPBinitial diagnosisOS/EFSText7
He et al. (2020)2020CNR122qRT-PCRMEG3↓medianBMinitial diagnosis,non-M3OS/EFSText7
Masoud Eslami et al. (2021)2022IRR60qRT-PCRNORAD↑medianBMinitial diagnosis,non-M3OS/RFSText7

Basic characteristics of included literature.

Note: R: Retrospective study; P: Prospective research; BM: Bone marrow blood; PB: Peripheral blood; OS: Overall survival rate; RFS: recurrence free survival rate; DFS: Event free survival rate; EFS: Disease free survival rate.

3.3 The outcomes of the meta-analysis

3.3.1 The correlation between aberrant lncRNA expression and overall survival (univariate analysis) in AML patients

17 studies have utilized univariate analysis to investigate the relationship between aberrant lncRNA expression and overall survival (OS) in AML patients. Heterogeneity analysis (I2 = 0.0%, P > 0.05) indicated no significant heterogeneity, leading to the use of a fixed-effects model for the meta-analysis. The results (Figure 2, HR = 2.46, 95% CI 2.11–2.88, P < 0.001) demonstrated that the aberrant expression of lncRNAs, including high expression of DANCR, SNHG7, HEIH, FOXD3-AS1, MALAT-1, PANDAR, TUG1, ZEB2-AS1, NEAT1, ANRIL, SNHG14, SNHG5, CRNDE, NORAD, RBM5-AS1, and low expression of IRAIN, was significantly associated with reduced OS in AML patients, with a statistically significant difference.

FIGURE 2

3.3.2 The correlation between aberrant lncRNA expression and overall survival (multivariate) in AML patients

The 19 included studies utilized multivariate analysis to investigate the relationship between aberrant lncRNA expression and overall survival (OS) in AML patients. Heterogeneity analysis revealed significant heterogeneity (I2 = 53.1%, P < 0.05), prompting the use of a random-effects model for the meta-analysis. The meta-analysis results (Figure 3) showed that AML patients with aberrant lncRNA expression (high expression of XIST, HOXA-AS2, CRNDE, MALAT-1, ANRIL, SNHG14, ZEB2-AS1, HOTAIR, PANDAR, TUG1, SNHG5, RBM5-AS1, NEAT1, KCNQ1OT1, UCA1, CRNDE, NORAD, etc., and low expression of MEG3, IRAIN) had a shorter OS, indicating a poor prognosis. The difference was statistically significant (HR = 2.21, 95% CI 1.82–2.70, P < 0.001). Additionally, we summarized all the factors included in the multivariate analysis of each study with OS as the outcome variable to facilitate the exploration of potential sources of heterogeneity or error in the meta-analysis (Table 3).

FIGURE 3

TABLE 3

Types of lncRNAsFactorsTypes of lncRNAsFactorsTypes of lncRNAsFactors
NEAT1risk stratificationHOXA-AS2 (Qu Y et al.)WBCHOXA-AS2 (Shan Q et al.)WBC
FAB classificationMRD positivityPrognostic risk stratification
WBCZEB2-AS1Medical Research Council (favorable/intermediate vs. adverse)miR-124-3p relative expression level
HbEuropean Leukemia Net (favorable/intermediate vs. adverse)Age
PLTTUG1(Wang X F et al.)AgeKCNQ1OT1Sex
CLAG treatment (vs. FLAG treatment)MaleSubtype
AgeWBCNCCN grouping
Male (vs. female)Risk stratificationNCCN grouping
Relapsed disease (vs. refractory)WBCExtramedullary infiltration
Secondary disease (vs. primary)HGBXISTWBC
TUG1(Luo W et al.)Poorer risk stratificationHOTAIRPLTmiR-196b relative expression level
Higher ECOG performance scoreBlasts in BMFAB classification
BM blastsComplete remissionRBM5-AS1WBC
CR at first inductionWBCProportion of bone marrow primitive cells
Previous allo-HSCTAGEWBC
Second or higher salvage therapy (vs. first)Risk classificationCRNDE (Wang T F et al.)PLT
MEG3Poorer risk stratificationPANDARFLT3-ITD mutationNCCN grouping
MALAT-1WBCCEBPA mutationExtramedullary infiltration
SNHG5Cytogeneticsc-KIT mutationmiR-384 relative expression level
FAB classificationN/K-RAS mutationProportion of bone marrow primitive cells
SNHG14 and ANRILFLT3/ITDIDH1/2 mutationRisk stratification
CR vs. NCRU2AF1 mutationFAB classification
NORADAgeSexNEAT1WBC
Cytogenetic risk groupageHb
FLT3WBCPLT
NPM1Hb
CRNDEBM blastsPLT
FLT3-ITDBM blasts
NPM1UCA1Karyotype (normal vs. abnormal)
Gene mutation (existent vs. non-existent)
Prognostic risk stratification

Summary of factors in multiple factor analysis of different studies.

Furthermore, we conducted subgroup analyses based on study region, sample size (number of cases), source of material, and disease type to explore the sources of heterogeneity. The results (Table 4) indicated that each subgroup analysis consistently demonstrated that aberrant lncRNA expression was associated with a reduced OS.

TABLE 4

subgroupNumber of studiessample sizeHR (95%CI)Peffect modelheterogeneity
I2P
Region
CN161,5412.157 (1.709–2.722)<0.001random effect60.60%0.001
Non-CN55242.510 (1.778–3.543)<0.001random effect0%0.848
Sample size
≥100101,3511.928 (1.502–2.474)<0.001random effect52.50%0.026
<100117142.558 (1.941–3.370)<0.001random effect35.60%0.114
Source of Materials
PB66342.152 (1.600–2.993)<0.001random effect50%0.075
BM131,1522.132 (1.608–2.828)<0.001random effect55%0.009
PB or BM22793.482 (1.934–6.268)<0.001random effect0%0.943
Disease type
AML131,2712.409 (1.846–3.144)<0.001random effect45.60%0.037
AML (non-M3)77381.869 (1.418–2.462)<0.001random effect47.60%0.075
AML (M5)1562.551 (1.309–4.971)0.006random effect··

Subgroup analysis results.

3.3.3 The correlation between aberrant lncRNA expression and DFS, EFS, and RFS (multivariate variables) in AML patients

2 studies reported the correlation between aberrant lncRNA expression and DFS in AML patients. Heterogeneity analysis indicated I2 = 16.9% and P > 0.05, leading to the use of a fixed-effects model for analysis. The results (Figure 4) demonstrated that high expression of lncRNA ZEB2-AS1 was associated with a decreased DFS in AML patients (HR = 2.390, 95%CI 1.037–5.507, P = 0.041), with a statistically significant difference.

FIGURE 4

3 studies analyzed the relationship between lncRNA and AML prognosis, with EFS as the outcome measure. Since the results of Hola et al. (P < 0.05) were not statistically significant, we excluded this study and included the remaining two in the meta-analysis. Heterogeneity analysis revealed I2 = 6.2% and P > 0.05, thus a fixed-effects model was adopted. The results (Figure 5) indicated that high expression of lncRNA TUG1 and low expression of lncRNA MEG3 were associated with a reduced EFS in AML patients (HR = 1.51, 95%CI 1.19–1.90, P = 0.001), with a statistically significant difference.

FIGURE 5

5 studies investigated the relationship between aberrant lncRNA expression and RFS in AML patients. Heterogeneity testing (I2 = 0.0%, P > 0.05) led to the use of a fixed-effects model for meta-analysis. The results (Figure 6) showed that aberrant expression of lncRNA (high expression of NORAD, ANRIL, SNHG14, HOXA-AS2, etc., and low expression of IRAIN) was associated with a reduced RFS in AML patients (HR = 2.82, 95%CI 2.03–3.91, P < 0.001), with a statistically significant difference.

FIGURE 6

3.3.4 The relationship between the high expression of lncRNA HOXA-AS2, CRNDE, ZEB2-AS1, TUG1, and MALAT-1 and the prognosis of AML patients

It is evident from Table 2 that multiple studies included in the literature have investigated the impact of high expression of lncRNA HOXA-AS2, CRNDE, ZEB2-AS1, TUG1, and MALAT-1 on the prognosis of AML patients. Due to the different result types of the studies on lncRNA MALAT-1, these results could not be combined. Therefore, we conducted a Meta-analysis to examine the relationship between lncRNA ZEB2-AS1 and DFS, and the relationships between the other three lncRNAs (CRNDE, TUG1, and HOXA-AS2) and OS. The results (as shown in Figure 7) indicated that high expression of lncRNA CRNDE and TUG1 was associated with a reduced OS in AML patients, and high expression of lncRNA ZEB2-AS1 was associated with a decreased DFS in AML patients, with statistically significant differences. However, high expression of lncRNA HOXA-AS2 was associated with a reduced OS in AML patients, but this association was not statistically significant.

FIGURE 7

3.3.5 Publication bias and sensitivity analysis

We conducted a publication bias assessment using the included literature with OS (single factor or multiple factors) as the outcome indicator. Begg’s test (P = 0.944) and Egger’s test (P = 0.346) indicated no publication bias in the literature with OS (single factor) as the outcome indicator. However, the literature with OS (multiple factors) as the outcome indicator showed a certain degree of publication bias (Begg’s test: P = 0.020, Egger’s test: P < 0.001).

A sensitivity analysis was performed for the OS of AML patients in the multiple-factor analysis. The results (Figure 8) indicated that the studies by Jia et al. (2018) and He et al. (2020) significantly influenced the heterogeneity of the Meta-analysis. After excluding these studies and re-analyzing the heterogeneity, the heterogeneity analysis result decreased from I2 = 53% to I2 = 9.3%, with P = 0.345, HR = 2.147, 95%CI (1.839 - 2.507), P < 0.001. No significant change was observed in the combined effect size after exclusion, indicating good stability of the results.

FIGURE 8

4 Discussion

AML is a hematological disorder characterized by high malignancy and rapid disease progression, with complex etiological factors and significant heterogeneity. Currently, the primary treatment modalities for AML include intensive chemotherapy, targeted therapy, and hematopoietic stem cell transplantation, which have significantly improved the 5-year survival rate of AML patients. However, some patients still face challenges such as poor prognosis, high drug resistance, and high recurrence rates. Therefore, effective prognosis monitoring and the identification of therapeutic targets have become key research priorities for many scholars.

Initially, lncRNA was discovered and considered as “noise” in gene transcription due to its non-coding nature for proteins. However, with advancements in life sciences and gene sequencing technologies, researchers have gradually recognized the critical role of lncRNA in the regulation of biological processes. The types of lncRNA are extremely diverse, and their mechanisms of action are highly complex, and our understanding of them remains limited. Currently, researchers believe that lncRNA plays significant roles in epigenetics, cell apoptosis, differentiation, and other processes, and its involvement has been identified in the development of many diseases. Mumbach et al. published an article in “Nature Methods” using HiCHIRP technology to elucidate the mechanism by which lncRNA regulates chromatin structure and gene expression, demonstrating the significant application value of lncRNA in the field of life sciences (Mumbach et al., 2019). Additionally, with the application of third-generation sequencing technology, a technical foundation has been established for the research and application of lncRNA in clinical medicine. Therefore, exploring the role of lncRNA in the occurrence and development of AML is a highly significant approach for identifying new therapeutic targets and effective prognosis monitoring indicators for AML patients. We employed a meta-analysis method to incorporate studies examining the relationship between lncRNA and the prognosis of AML patients, providing evidence-based medical evidence for the clinical application of lncRNA and offering a valuable reference for scholars researching the relationship between lncRNA and AML.

Our research findings indicate that the abnormal expression of lncRNA has a negative impact on the overall survival (OS), disease-free survival (DFS), relapse-free survival (RFS), and event-free survival (EFS) of AML patients, thereby reducing their prognosis. This is consistent with the previous meta-analysis results of Lin Hongli et al., Shi et al., and Priya (Lin et al., 2022; Shi Jie et al., 2020; Priya et al., 2024). With the in-depth research on lncRNA and AML by scholars, we designed a relatively rigorous meta-analysis protocol, incorporating more recently published studies, and analyzing the relationship between newly discovered lncRNA and the prognosis of AML patients. In terms of the results, there is a certain degree of heterogeneity in studies with OS (using multi-factor analysis) as the outcome indicator. Through subgroup analysis and sensitivity analysis, we believe that the source of heterogeneity may be the different baseline characteristics of the included studies, such as disease types, sample collection methods, and the ethnicity of the study subjects. Additionally, some indicators could not be analyzed due to the small number of studies, non-inclusion in the research protocol, or a large time span of the studies, making it impossible to establish a unified standard, such as the types of lncRNA, expression levels and cut-off values, and AML treatment regimens. We consider that the differences in these baseline characteristics may be the main source of heterogeneity in the included literature, and we hope that more comprehensive and high-quality related studies will emerge in the future. Furthermore, we summarized the various factors in the multi-factor analysis included in the studies and found that the factors explored in each study were not the same. Some studies included comprehensive factors, covering multiple laboratory indicators, and even considered factors such as disease risk stratification and gene mutations, resulting in more reliable outcomes. Some studies only included factors such as age, gender, and white blood cell count, leading to potential positive biases, which may affect the persuasiveness of the resulting evidence-based medical evidence.

For the lncRNAs (HOXA-AS2, CRNDE, ZEB2-AS1, TUG1, MALAT-1) mentioned in multiple articles, we conducted a separate meta-analysis. The results showed that the high expression of lncRNAs (CRNDE, TUG1) reduces the overall survival rate of AML patients, and the high expression of lncRNA ZEB2-AS1 reduces the disease-free survival rate of AML patients. The conclusions were statistically significant, and the heterogeneity of the included literature was relatively small. This suggests that lncRNAs CRNDE, ZEB2-AS1, and TUG1 may have significant potential to become prognostic monitoring indicators for AML patients. However, the number of included studies on lncRNAs (CRNDE, ZEB2-AS1, TUG1) is relatively small, and these three lncRNAs still require further validation to become prognostic risk stratification indicators for AML patients.

Herein, we summarize the full names, loci, and selected functions of the 22 lncRNAs mentioned in the included literature in tabular form to provide valuable references for readers’ research on the correlation between lncRNAs and AML (Table 5). Due to the limited space in this article, we present an overview of only the 3 lncRNAs that are frequently mentioned in multiple studies (Figure 9).

TABLE 5

lncRNAGenomic contextCharacteristics
HEIHHigh expressed in hepatocellular carcinomaSource of Data:GRCh38
Location:5q35.3, NC_000005.10:180,829,786–180,831,784
Exon count: 1
Research on lncRNA HEIH in hepatocellular carcinoma has been extensive, and it is recognized as an independent prognostic factor. Moreover, it is hypothesized that HEIH may interact with EZH2, potentially modulating the cell cycle (Bill et al., 2019). Currently, there are limited studies on the correlation between lncRNA HEIH and AML. Ma Yue et al. propose that its overexpression may influence the chemoresistance of AML, thereby affecting the prognosis of AML (Ma and Li, 2024).
FOXD3-AS1Forkhead box D3 antisense 1Source of Data:GRCh38
Location:1p31.3, NC_000001.11: 63,320,527–63,324,7964
Exon count: 6
Currently, there are limited studies on the correlation between LncRNA FOXD-AS1 and AML. Lu Meng et al. proposed that the abnormal expression of LncRNA FOXD-AS1 may promote the progression of AML by inhibiting the proliferation of Kasumi-1 cells through its suppression (Lu et al., 2022).
DANCRDifferentiation antagonistic non-protein-coding RNASource of Data:GRCh38
Location:4q12, NC_000004.12: 52,711,563–52,721,526
Exon count: 5
Studies have shown that the knockdown of lncRNA DANCR can reduce the invasiveness of AML. Kong Wenyan et al. confirmed that lncRNA DANCR regulates the cell cycle of AML cells by targeting miR-656-3p. DANCR has significant potential as a therapeutic target for AML (Bill et al., 2019; Kong et al., 2022).
SNHG7Small nucleolar RNA host gene 7Source of Data:GRCh38
Location:9q34.3, NC_000009.12: 136,724,234–136,728,542
Exon count: 5
Currently, the mechanism by which SNHG7 influences AML remains unclear. Shi Jian et al. and Saeed Hassani et al. have confirmed through clinical sample experiments and statistical analyses that SNHG7 is an independent prognostic factor for poor outcomes in AML (Shi et al., 2020b; Hassani et al., 2024).
MALAT-1Metastasis-associated lung adenocarcinoma transcript 1Source of Data:GRCh38
Location:11q13.1, NC_000011.10: 65,496,859–65,507,393
Exon count: 3
MALAT-1 is the most abundant and most conserved among lncRNAs and is associated with the metastasis and invasion of multiple cancers. Jin Jing et al. verified through experiments that MALAT-1 regulates the progression of AML by promoting the m6A modification of ZEB1 (Jin et al., 2023).
XISTX inactive specific transcriptSource of Data:GRCh38
Location:Xq13.2, NC_000023.11: 73,817,449–73,855,919
Exon count: 9
Numerous studies have demonstrated that lncRNA XIST can regulate AML cell proliferation, inhibit cell apoptosis, and consequently influence AML progression. Wang Chong et al. reported that downregulating XIST can decrease MYC expression, thereby reducing drug resistance and promoting apoptosis in AML cells (Wang et al., 2020a; Jiang et al., 2024).
HOXA-AS2HOXA cluster antisense RNA 2Source of Data:GRCh38
Location:7p15.2.3, NC_000007.14: 27,121,234–27,129,443
Exon count: 4
Existing studies have demonstrated that the HOXA-AS2-EZH2-LATS2 axis is a critical pathway governing the onset and progression of AML (Feng et al., 2020).
CRNDEColorectal neoplasia differently expressedSource of Data:GRCh38
Location:16q12.2, NC_000016.10: 54,917,860–54,929,887
Exon count: 6
See the following text
ZEB2-AS1Zinc finger E-box binding homebox 2 antisense 1Source of Data:GRCh38
Location:2q22.3, NC_000002.12: 144,519,484–144,521,027
Exon count: 4
See the following text
ANRILAntisense non-coding RNA in the INK4 locusSource of Data:GRCh38
Location:9p21.3, NC_000009.12:21,981,455–22,141,476
Exon count: 22
The study by Wang et al. demonstrates that ANRIL is involved in regulating the proliferation and apoptosis of Kasumi-1 cells, which may consequently impact the progression of AML and lead to an unfavorable prognosis (Wang et al., 2024).
SNHG14Small nucleolar RNA host gene 14Source of Data:GRCh38
Location:15q11.2, NC_000015.10: 24,764,021–25,479,047
Exon count: 148
Studies on the mechanism of SNHG14 in AML are relatively limited. Wang Xiaoliang et al. demonstrated that silencing SNHG14 to regulate the miR-193b-3p/MCL1 axis decreases the viability of AML cells and promotes their apoptosis (Wang et al., 2021).
HOTAIRHOX transcript antisense RNASource of Data:GRCh38
Location:12q13.13, NC_000012.12: 53,961,047–53,976,217
Exon count: 9
Currently, extensive research has been conducted on HOTAIR. Numerous studies have demonstrated that lncRNA HOTAIR influences the self-renewal of AML stem cells by modulating epigenetic factors or reduces the sensitivity of AML cells to chemotherapy drugs, thereby lowering patient survival rates through multiple pathways (Rajagopal et al., 2020; Gao et al., 2018; Zhou et al., 2021).
PANDARPromoter of CDKN1A Antisense DNA Damage Activated RNASource of Data:GRCh38
Location:6p21.2, NC_000006.12: 36,673,469–36,675,276
Exon count: 1
Reports on LncRNA PANDAR are more commonly found in various solid tumors and less frequently in hematological neoplasms. Yang Lan et al. assessed the expression levels of PANDAR in AML patients and concluded that its overexpression is associated with poor prognosis in AML (Yang et al., 2018).
IRAINIGF1 receptor antisense imprinted noncoding RNASource of Data:GRCh38
Location:15q26.3, NC_000015.10: 98,645,369–98,651,279
Exon count: 1
IRAIN is an antisense long non-coding RNA of IGF1R and is related to the intramolecular loop structure between the DNA promoter and enhancer of IGF1R. (Liang et al., 2020) IRAIN is involved in the interaction with chromatin DNA. Studies have shown that low expression of IRAIN is closely associated with a reduced complete remission rate in AML patients (Pashaiefar et al., 2018; Sun et al., 2014).
TUG1Taurine-upregulation gene 1Source of Data:GRCh38
Location:22q12.2, NC_000022.11: 30,968,251–30,980,407
Exon count: 4
See the following text
SNHG5Small nucleolar RNA host gene 5Source of Data:GRCh38
Location:6q14.3, NC_000006.12: 85,676,833–85,678,905
Exon count: 6
A bioinformatics and meta-analysis study indicates that the overexpression of SNHG5 is associated with poor prognosis in various cancers, including colorectal cancer and AML (Pashirzad and Sahebkar, 2024). Furthermore, multiple studies have experimentally confirmed that SNHG5 is involved in cell proliferation, apoptosis, and chemotherapy resistance in AML (Li and Sun, 2018; Priya et al., 2024)
RBM5-AS1Long non-coding RNA binding motif protein 5-antisense strand 1Source of Data:GRCh38
Location:3p21.31, NC_000003.12: 50,099,463–50,101,126
Exon count: 1
Currently, there are limited studies on the correlation between RBM5-AS1 and AML. One study demonstrated that RBM5-AS1 is highly expressed in the bone marrow of AML patients and may influence cell proliferation, migration, and invasion by modulating the Wnt/β-catenin pathway (Wang et al., 2023b).
NEAT1Nuclear paraspeckle assembly transcript 1Source of Data:GRCh38
Location:11q13.1, NC_000011.10: 65,420,523–65,447,813
Exon count: 1
At present, numerous studies have demonstrated that NEAT1 controls the proliferation and apoptosis of AML cells by regulating gene expression via miRNA (Yan et al., 2021; Rostami et al., 2022).
KCNQ1OT1KCNQ1 opposite strand/antisense transcript 1Source of Data:GRCh38
Location:11p15.5, NC_000011.10: 2,599,160–2,709,160
Exon count: 1
KCNQ1OT1 accelerates the progression of AML and enhances chemoresistance via the miR-193a-3p/TSpan3 axis (Sun et al., 2020).
UCA1Urothelial carcinoma-associated 1Source of Data:GRCh38
Location:19p13.12, NC_000019.10: 15,828,208–15,837,058
Exon count: 3
UCA1 is capable of inhibiting the proliferation of AML cells and promoting cell apoptosis. This effect has been validated in studies involving both adult and pediatric AML patients. Furthermore, Xiao et al. compared the expression levels of lncRNA UCA1 in exosomes from AML patients and those who achieved complete remission after chemotherapy, concluding that exosomal lncRNA UCA1 could serve as a crucial biomarker for the diagnosis and treatment monitoring of AML, providing a novel approach for more convenient monitoring of AML prognosis and development (Xiao et al., 2022; Liang et al., 2020; Wilson et al., 2023).
MEG3Maternally expressed gene 3Source of Data:GRCh38
Location:14q32.2, NC_000014.9: 100,822,615–100,864,517
Exon count: 13
Current research suggests that MEG3 may influence the onset and progression of AML by modulating the expression of p53 (Lyu et al., 2017).
NORADNoncoding RNA activated by DNA damageSource of Data:GRCh38
Location:20q11.23, NC_000020.11: 36,045,083–36,051,493
Exon count: 1
Currently, there is relatively limited research on the mechanisms of NORAD in AML. Masoud Eslami et al. demonstrated that high NORAD expression is a critical factor associated with poor prognosis in non-M3 AML patients, based on comparisons of NORAD expression levels in clinical samples from non-M3 AML patients and healthy individuals (Masoud Eslami et al., 2021).

Summary Table of Multiple lncRNA Information.

FIGURE 9

LncRNA CRNDE (Colorectal Neoplasia Differently Expressed) was initially identified with aberrant expression in colorectal neoplasms and is located on the reverse strand of chromosome 16 (Thierry-Mieg and Thierry-Mieg, 2006). Subsequent in-depth studies have revealed that lncRNA CRNDE exhibits abnormal expression in various solid tumors, such as glioma, hepatocellular carcinoma, and lung cancer, as well as in hematological malignancies. It has been demonstrated that lncRNA CRNDE holds significant value in the diagnosis, treatment, and prognosis of certain tumors (Wang T. et al., 2023; Hola et al., 2021; Ma et al., 2022; Ma et al., 2019). Numerous studies have indicated that lncRNA CRNDE may be involved in the occurrence and development of cancer through its regulatory interactions with microRNAs and proteins (Hor et al., 2023; Xie et al., 2018). Ma et al. demonstrated that knocking out CRNDE in acute promyelocytic leukemia (APL) mice could induce APL cell differentiation, inhibit proliferation, and extend the survival time of APL mice (Ma et al., 2020). Liu et al. proved that CRNDE participates in the CRNDE/miR-136-5p/MCM5 axis to regulate cellular processes and thereby influences the disease progression of AML (Liu et al., 2021). From an evidence-based medicine perspective, our research has shown that the risk of poor prognosis in AML patients with high expression of lncRNA CRNDE is 1.88 times higher than that in patients with low expression. CRNDE may become an important indicator of poor prognosis in AML in the future, but further exploration is still necessary.

LncRNA ZEB2-AS1 (zinc finger E-box binding homeobox 2 antisense 1) is an antisense long non-coding RNA that undergoes antisense transcription during protein coding and is located on the long arm of chromosome 2 at band 2q3. Studies have indicated that lncRNA ZEB2-AS1 shows increased expression in various cancers (Mahboobeh et al., 2020). Guan et al. verified through bioinformatics analysis and mouse experiments that lncRNA ZEB2-AS1 regulates the proliferation and apoptosis of AML cells via the miR-122-5p/PLK1 axis (Guan et al., 2020). The study by Abdelrahman et al., which we included, concluded that lncRNA ZEB2-AS1 can be regarded as a predictor of poor prognosis for AML in Egyptians (Abdelrahman et al., 2023). We combined this study with the one by Shi et al. for meta-analysis and concluded that high expression of lncRNA ZEB2-AS1 reduces the disease-free survival (DFS) of AML patients. ZEB2-AS1 is expected to become an important indicator for prognosis monitoring of AML patients in the future, but more comprehensive studies are still required for validation.

LncRNA TUG1 (taurine-upregulated gene 1) is a 7.1-kb long non-coding RNA located on human chromosome 22. Multiple studies have confirmed that the abnormal expression of lncRNA TUG1 is closely related to the disease progression of various conditions, particularly cardiovascular diseases (Chang and Su, 2024; Liu B. et al., 2024; Liu Y. et al., 2024). It may influence the occurrence and progression of diseases by regulating gene expression or interacting with specific proteins as a competitive endogenous RNA (ceRNA) (Li et al., 2016). Sun et al. reconstructed the lncRNA-miRNA-mRNA network and identified three lncRNAs (XIST, TUG1, GABPB1-AS1) as potential key lncRNAs for cytogenetically normal AML from a bioinformatics perspective, demonstrating that lncRNA TUG1 might be related to the prognosis of AML. This article was the first to propose that lncRNA GABPB1-AS1 might be an important biomarker related to the prognosis of AML (Sun et al., 2022). Other studies have suggested that TUG1 might be associated with doxorubicin resistance in AML, thereby affecting the prognosis of AML (Li et al., 2019). We combined two related studies on TUG1 and concluded that the risk of reduced overall survival (OS) in AML patients with high expression of lncRNA TUG1 is 2.49 times higher than that in patients with low expression. TUG1 may become a new tool for risk stratification of AML in the future, but further research on its mechanism of action is still awaited.

From the existing studies, it is evident that no single lncRNA can directly predict the prognosis of AML or provide unambiguous evidence for risk stratification of AML. Similar to the complex pathogenesis of AML, the regulatory mechanisms of lncRNAs involved in the disease are also intricate, likely influencing the disease through the joint participation of one or more lncRNAs. Therefore, this highlights the need to consider the variations in the expression of multiple lncRNAs in the disease progression when researching the prognostic risk stratification of lncRNAs for AML. Scores should be assigned based on the significance of their roles in the process, thereby establishing a comprehensive scoring system for evaluating the prognosis of AML using lncRNAs. Additionally, the current highly efficient testing techniques can provide substantial assistance for the diagnosis, treatment, and prognosis detection of AML.

Limitations of this study: ① In some studies, hazard ratios (HRs) were not provided directly; instead, we extracted survival data from Kaplan-Meier (KM) curves, which may introduce certain errors. ② The types, expression levels, and cutoff values of lncRNAs included in this study varied, potentially impacting the reliability of the results. ③ The majority of the included studies originated from China, which may affect the generalizability of the findings. ④ The majority of the included studies reported positive results, suggesting the presence of publication bias that could not be entirely eliminated.

In conclusion, the abnormal expression of lncRNAs is associated with poor prognosis in AML, demonstrating considerable potential to serve as prognostic monitoring indicators and tools for risk stratification of AML. Specifically, the evidence from evidence-based medicine indicates a clear correlation between the high expression of lncRNAs (CRNDE, ZEB2-AS1, TUG1) and poor prognosis in AML. Future research can further validate these findings through various approaches, including bioinformatics, basic experiments, and clinical studies. However, whether lncRNAs can become reliable prognostic risk stratification tools for AML remains to be determined. More large-scale, multi-center, high-quality studies are needed to explore the relationships between the expression levels of different lncRNAs and the baseline characteristics of AML patients, such as different subtypes of AML, the effectiveness of different treatment regimens, and patient age.

Statements

Author contributions

GL: Writing–original draft, Writing–review and editing, Conceptualization, Data curation, Formal Analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization. LS: Investigation, Methodology, Supervision, Writing–original draft. PL: Methodology, Project administration, Software, Supervision, Writing–original draft, Writing–review and editing. RQ: Methodology, Project administration, Visualization, Writing–original draft, Writing–review and editing. LW: Investigation, Project administration, Software, Validation, Writing–original draft, Writing–review and editing. AJ: Writing–original draft, Writing–review and editing, Conceptualization, Data curation, Formal Analysis, Funding acquisition, Investigation, Methodology, Project administration, Resources, Software, Supervision, Validation, Visualization.

Funding

The author(s) declare that financial support was received for the research, authorship, and/or publication of this article. This paper has received support from two research funds. One is the research fund of the Inner Mongolia Physicians Association applied for by the corresponding author, AJ. The project title is: Exploring the Real-World Study of Romiplostim Versus Recombinant Human Thrombopoietin in the Treatment of ITP, and the fund code is: YSXH2024KYD01. The other is the fund of the Inner Mongolia Autonomous Region Health and Wellness Science and Technology Plan Project applied for by LS. The project title is: Research on Molecular Diagnosis of Acute Myeloid Leukemia Patients Based on Liquid Biopsy Technology, and the fund code is: 202201035.

Conflict of interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Generative AI statement

The author(s) declare that no Generative AI was used in the creation of this manuscript.

Publisher’s note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

References

  • 1

    AbdelrahmanA. M. N.DiabS. M.ShabaanH. M. K.AhmedM. N. A.NabilR. (2023). The study of long noncoding RNA TUG 1 and ZEB2-AS1 expression in newly diagnosed Egyptian adult acute myeloid leukemia patients. Egypt. J. Med. Hum. Genet.24, 46. 10.1186/s43042-023-00423-z

  • 2

    BaiX.WuY.LiZ.ChenX.WangM.LiJ. (2024). Expression of lncRNA UCA1 in patients with acute myeloid leukemia and its clinical significance. Chin. J. Exp. Hematol.32, 9991004. 10.19746/j.cnki.issn.1009-2137.2024.04.004

  • 3

    BillM.PapaioannouD.KarunasiriM.KohlschmidtJ.PepeF.WalkerC. J.et al (2019). Expression and functional relevance of long non-coding RNAs in acute myeloid leukemia stem cells. Leukemia33, 21692182. 10.1038/s41375-019-0429-5

  • 4

    ChangC.SuQ. (2024). Research progress of lncRNA-TUG1 as a competitive endogenous RNA in cardiovascular diseases. Chin. J. Pathophysiol.40, 557563. 10.3969/j.issn.1000-4718.2024.03.021

  • 5

    DöhnerH.EsteyE.GrimwadeD.AmadoriS.AppelbaumF. R.BüchnerT.et al (2017). Diagnosis and management of AML in adults: 2017 ELN recommendations from an international expert panel. Blood129, 424447. 10.1182/blood-2016-08-733196

  • 6

    DöhnerH.WeisdorfDjBloomfieldCd (2015). Acute myeloid leukemia. N. Engl. J. Med.373, 11361152. 10.1056/NEJMra1406184

  • 7

    FengY.HuS.LiL.PengX.ChenF. (2020). Long noncoding RNA HOXA-AS2 functions as an oncogene by binding to EZH2 and suppressing LATS2 in acute myeloid leukemia (AML). Cell death and Dis.11, 1025. 10.1038/s41419-020-03193-3

  • 8

    GamaleldinM. A.GhallabO.Abo ElwafaR. A. (2021). Prognostic significance of long non coding RNA ANRIL and SNHG14 in acute myeloid leukemia. Asian Pac J. Cancer Prev.22, 37633771. 10.31557/APJCP.2021.22.12.3763

  • 9

    GaoS.ZhouB.LiH.HuangX.WuY.XingC.et al (2018). Long noncoding RNA HOTAIR promotes the self-renewal of leukemia stem cells through epigenetic silencing of p15. Exp. Hematol.67, 3240.e3. 10.1016/j.exphem.2018.08.005

  • 10

    GuanJ.LiuP.WangA.WangB. (2020). Long non-coding RNA ZEB2-AS1 affects cell proliferation and apoptosis via the miR-122-5p/PLK1 axis in acute myeloid leukemia. Int. J. Mol. Med.46, 14901500. 10.3892/ijmm.2020.4683

  • 11

    HassaniS.RostamiP.PourtavakolM.KaramashtianiA.SayyadiM. (2024). Correlation of SNHG7 and BGL3 expression in patients with de novo acute myeloid leukemia; novel insights into lncRNA effect in PI3K signaling context in AML pathogenesis. Biochem. biophysics Rep.40, 101850. 10.1016/j.bbrep.2024.101850

  • 12

    HeC.WangX.LuoJ.MaY.YangZ. (2020). Long noncoding RNA maternally expressed gene 3 is downregulated, and its insufficiency correlates with poor-risk stratification, worse treatment response, as well as unfavorable survival data in patients with acute myeloid leukemia. Technol. Cancer Res. Treat.19, 1533033820945815. 10.1177/1533033820945815

  • 13

    HeX.HuY.XuS.YangK.MaC. (2022). Expression levels of serum lncRNA-MALAT-1 and miR-143 in patients with acute myeloid leukemia and their relationship with clinical characteristics and prognosis. Chin. Med. Her.19, 101105. 10.20047/j.issn1673-7210.2022.35.23

  • 14

    HolaM. A. M.AliM. A. M.ElNahassY.SalemT. A. E.MohamedM. R. (2021). Expression and prognostic relevance of long noncoding RNAs CRNDE and AOX2P in adult acute myeloid leukemia. Int. J. Lab. Hematol.43, 732742. 10.1111/ijlh.13586

  • 15

    HorYzSalvamaniS.GunasekaranB.YianKr (2023). CRNDE: a pivotal oncogenic long non-coding RNA in cancers. Yale J. Biol. Med.96, 511526. 10.59249/VHYE2306

  • 16

    HuangJ. L.LiuW.TianL. H.ChaiT. T.LiuY.FengZ.et al (2017). Upregulation of long non-coding RNA MALAT-1 confers poor prognosis and influences cell proliferation and apoptosis in acute monocytic leukemia. Oncol. Rep.38, 13531362. 10.3892/or.2017.5802

  • 17

    JiaZ.LiY.CuiG.ZhaoH.LiP.LuoJ. (2018). Expression of LncRNA KCNQ1OT1 in patients with acute myeloid leukemia and its clinical significance. Chin. J. Exp. Hematol.26, 653657. 10.7534/j.issn.1009-2137.2018.03.004

  • 18

    JiangZ.LiuT.WangY.LiJ.GuoL. (2024). Effect of lncRNA XIST on acute myeloid leukemia cells via miR-142-5p-PFKP axis. Hematol. Amst. Neth.29, 2306444. 10.1080/16078454.2024.2306444

  • 19

    JinJ.FuL.HongP.FengW. (2023). MALAT-1 regulates the AML progression by promoting the m6A modification of ZEB1. Acta biochim. Pol.70, 3743. 10.18388/abp.2020_6017

  • 20

    KongW.Q.XiaoC. (2022). LncRNA DANCR targets miR-656-3p to regulate the proliferation, apoptosis, migration and invasion of acute myeloid leukemia cells. Chin. J. Immunol.38, 10581063. 10.3969/j.issn.1000-484X.2022.09.007

  • 21

    LiJ.SunC. K. (2018). Long noncoding RNA SNHG5 is up-regulated and serves as a potential prognostic biomarker in acute myeloid leukemia. Eur. Rev. Med. Pharmacol. Sci.22, 33423347. 10.26355/eurrev_201806_15154

  • 22

    LiQ.SongW.WangJ. (2019). TUG1 confers Adriamycin resistance in acute myeloid leukemia by epigenetically suppressing miR-34a expression via EZH2. Biomed. and Pharmacother. = Biomedecine and Pharmacother.109, 17931801. 10.1016/j.biopha.2018.11.003

  • 23

    LiZ.ShenJ.ChanMtWuWk (2016). TUG1: a pivotal oncogenic long non-coding RNA of human cancers. Cell Prolif.49, 471475. 10.1111/cpr.12269

  • 24

    LiangY.LiE.ZhangH.ZhangL.TangY.WanyanY. (2020). Silencing of lncRNA UCA1 curbs proliferation and accelerates apoptosis by repressing SIRT1 signals by targeting miR-204 in pediatric AML. J. Biochem. Mol. Toxicol.34, e22435. 10.1002/jbt.22435

  • 25

    LinH.LuX.LiY.SunY. (2022). A meta-analysis of the effect of aberrant expression of long non-coding RNAs on the prognosis of acute myeloid leukemia. Int. Med. Health Guid. News28, 28132821. 10.3760/cma.j.issn.1007-1245.2022.20.001

  • 26

    LiuB.HaoM.ChenW. (2024a). Changes in serum levels of lncRNA TUG1 and miR-370-3p and their significance in patients with acute myocardial infarction. Shandong Med. J.64, 7275. 10.3969/j.issn.1002-266X.2024.22.016

  • 27

    LiuC.ZhongL.ShenC.ChuX.LuoX.YuL.et al (2021). CRNDE enhances the expression of MCM5 and proliferation in acute myeloid leukemia KG-1a cells by sponging miR-136-5p. Sci. Rep.11, 16755. 10.1038/s41598-021-96156-3

  • 28

    LiuH. (2021). Emerging agents and regimens for AML. J. Hematol. and Oncol.14, 49. 10.1186/s13045-021-01062-w

  • 29

    LiuY.LiuX.WangJ.LiuP.LiuS. (2024b). The impact of LncRNA TUG1 mediating the Nrf2/HO-1 signaling pathway on lipopolysaccharide-induced cardiomyocyte apoptosis. Chin. J. Gerontology44, 17511755. 10.3969/j.issn.1005-9202.2024.07.051

  • 30

    LuM.LiuX.WangF.ZhaoY. (2022). Expression and function of long non-coding RNA FOXD3-AS1 in acute myeloid leukemia. Chin. J. Laboratory Diagnosis26, 16551660. 10.3969/j.issn.1007-4287.2022.11.016

  • 31

    LuX.WangX.DuY.ZhangJ. (2024). Research progress on the role of long non-coding RNAs in the occurrence and development of acute myeloid leukemia. Chin. J. Exp. Hematol.32, 974978. 10.19746/j.cnki.issn.1009-2137.2024.03.051

  • 32

    LuoW.YuH.ZouX.NiX.WeiJ. (2018). Long non-coding RNA taurine-upregulated gene 1 correlates with unfavorable prognosis in patients with refractory or relapsed acute myeloid leukemia treated by purine analogue based chemotherapy regimens. Cancer Biomark.23, 485494. 10.3233/CBM-181405

  • 33

    LyuY.LouJ.YangY.FengJ.HaoY.HuangS.et al (2017). Dysfunction of the WT1-MEG3 signaling promotes AML leukemogenesis via p53-dependent and -independent pathways. Leukemia31, 25432551. 10.1038/leu.2017.116

  • 34

    MaX.JinW.ZhaoC.WangX.WangK. (2022). CRNDE: a valuable long noncoding RNA for diagnosis and therapy of solid and hematological malignancies. Mol. Ther. Nucleic acids28, 190201. 10.1016/j.omtn.2022.03.006

  • 35

    MaX.ZhangW.ZhangR.LiJ.LiS.MaY.et al (2019). Overexpressed long noncoding RNA CRNDE with distinct alternatively spliced isoforms in multiple cancers. Front. Med.13, 330343. 10.1007/s11684-017-0557-0

  • 36

    MaX.ZhangW.ZhaoM.LiS.JinW.WangK. (2020). Oncogenic role of lncRNA CRNDE in acute promyelocytic leukemia and NPM1-mutant acute myeloid leukemia. Cell death Discov.6, 121. 10.1038/s41420-020-00359-y

  • 37

    MaY.LiJ. (2024). Expression and clinical significance of long non-coding RNA HEIH in patients with acute myeloid leukemia. Chin. J. Exp. Hematol.32, 10111017. 10.19746/j.cnki.issn.1009-2137.2024.04.006

  • 38

    MahboobehZ.PegahM.FatemehS.ElhamK.HaniehA.MiladR.et al (2020). lncRNA ZEB2-AS1: a promising biomarker in human cancers. IUBMB life72, 18911899. 10.1002/iub.2338

  • 39

    Masoud EslamiM.SoufizomorrodM.AhmadvandM. (2021). High expression of long noncoding RNA NORAD is associated with poor clinical outcomes in non-M3 acute myeloid leukemia patients. Hematol. Oncol. Stem Cell Ther.16, 7078. 10.1016/j.hemonc.2021.08.001

  • 40

    MumbachMrJmG.FlynnRaRoakeC. M.SatpathyA. T.RubinA. J.et al (2019). HiChIRP reveals RNA-associated chromosome conformation. Nat. methods16, 489492. 10.1038/s41592-019-0407-x

  • 41

    PashaiefarH.IzadifardM.YaghmaieM.MontazeriM.GheisariE.AhmadvandM.et al (2018). Low expression of long noncoding RNA IRAIN is associated with poor prognosis in non-M3 acute myeloid leukemia patients. Genet. Test. Mol. Biomarkers22, 288294. 10.1089/gtmb.2017.0281

  • 42

    PashirzadM.SahebkarA. (2024). The prognostic value and clinical significance of lncRNA SNHG5 expression in patients with multiple malignancies: a bioinformatic and meta-analysis. Curr. cancer drug targets24, 12861297. 10.2174/0115680096282865240111055640

  • 43

    PriyaG. M.TalwarR.BharadwajM.RuwaliM.PandeyAk (2024). Clinical relevance of long non-coding RNA in acute myeloid leukemia: a systematic review with meta-analysis. Leukemia Res.147, 107595. 10.1016/j.leukres.2024.107595

  • 44

    QuY.WangY.WangP.LinN.YanX.LiY. (2020). Overexpression of long noncoding RNA HOXA-AS2 predicts an adverse prognosis and promotes tumorigenesis via SOX4/PI3K/AKT pathway in acute myeloid leukemia. Cell Biol. Int.44, 17451759. 10.1002/cbin.11370

  • 45

    RajagopalT.TalluriS.RlA.DunnaNr (2020). HOTAIR LncRNA: a novel oncogenic propellant in human cancer. Clin. chimica acta; Int. J. Clin. Chem.503, 118. 10.1016/j.cca.2019.12.028

  • 46

    RmS.WangR.DavidoffA.MaX.ZeidanAm (2019). Epidemiology of acute myeloid leukemia: recent progress and enduring challenges. Blood Rev.36, 7087. 10.1016/j.blre.2019.04.005

  • 47

    RostamiM.KharajoRsParsa-KondelajiM.AyatollahiH.SheikhiM.KeramatiMr (2022). Altered expression of NEAT1 variants and P53, PTEN, and BCL-2 genes in patients with acute myeloid leukemia. Leukemia Res.115, 106807. 10.1016/j.leukres.2022.106807

  • 48

    SasakiK.RavandiF.KadiaTmDiNardoCdShortNjBorthakurG.et al (2021). De novo acute myeloid leukemia: a population-based study of outcome in the United States based on the Surveillance, Epidemiology, and End Results (SEER) database, 1980 to 2017. Cancer-am Cancer Soc.127, 20492061. 10.1002/cncr.33458

  • 49

    ShanQ.PanY.FeiH.DuY. (2022). Expression of lncRNA homeobox gene A-antisense strand 2 and miR-124-3p in plasma of patients with acute myeloid leukemia and their relationship with prognosis. Chin. J. Pract. Diagnosis Ther.36, 116120. 10.13507/i.issn.1674-3474.2022.02.003

  • 50

    ShiJ.DingW.LuH. (2020b). Identification of long non-coding RNA SNHG family as promising prognostic biomarkers in acute myeloid leukemia. OncoTargets Ther.13, 84418450. 10.2147/OTT.S265853

  • 51

    ShiJ.XinS.QinD. R. (2020a). The prognostic impact of abnormally expressed, long noncoding RNAs in acute myeloid leukemia: a meta-analysis. Hematology25, 219228. 10.1080/16078454.2020.1779480

  • 52

    ShiX.LiJ.MaL.WenL.WangQ.YaoH.et al (2019). Overexpression of ZEB2-AS1 lncRNA is associated with poor clinical outcomes in acute myeloid leukemia. Oncol. Lett.17, 49354947. 10.3892/ol.2019.10149

  • 53

    SunH.SunY.ChenQ.XuZ. (2020). LncRNA KCNQ1OT1 contributes to the progression and chemoresistance in acute myeloid leukemia by modulating Tspan3 through suppressing miR-193a-3p. Life Sci.241, 117161. 10.1016/j.lfs.2019.117161

  • 54

    SunJ.LiW.SunY.YuD.WenX.WangH.et al (2014). A novel antisense long noncoding RNA within the IGF1R gene locus is imprinted in hematopoietic malignancies. Nucleic acids Res.42, 95889601. 10.1093/nar/gku549

  • 55

    SunT.DongL.GuoY.ZhaoH.WangM. (2022). Revealing key lncRNAs in cytogenetically normal acute myeloid leukemia by reconstruction of the lncRNA-miRNA-mRNA network. Sci. Rep.12, 4973. 10.1038/s41598-022-08930-6

  • 56

    Thierry-MiegD.Thierry-MiegJ. (2006). AceView: a comprehensive cDNA-supported gene and transcripts annotation. Genome Biol.7, S12.1S12.14. 10.1186/gb-2006-7-s1-s12

  • 57

    WangC.LiL.LiM.WangW.LiuY.WangS. (2020a). Silencing long non-coding RNA XIST suppresses drug resistance in acute myeloid leukemia through down-regulation of MYC by elevating microRNA-29a expression. Mol. Med.26, 114. 10.1186/s10020-020-00229-4

  • 58

    WangD.ZengT.LinZ.YanL.WangF.TangL.et al (2020b). Long non-coding RNA SNHG5 regulates chemotherapy resistance through the miR-32/DNAJB9 axis in acute myeloid leukemia. Biomed. and Pharmacother. = Biomedecine and Pharmacother.123, 109802. 10.1016/j.biopha.2019.109802

  • 59

    WangJ.HuangB.GaoD.LiH.HanD. (2023a). Expression and clinical significance of serum LncRNA XIST and miR-196b in patients with acute myeloid leukemia. J. Difficult Complicat. Cases22, 10561060. 10.3969/j.issn.1671-6450.2023.10.009

  • 60

    WangR.LiC.DuanL.ShangM.YangR. (2023b). Expression and clinical significance of lncRNA RBM5-AS1 in acute myeloid leukemia. Lab. Med.38, 3945. 10.3969/j.issn.1673-8640.2023.01.008

  • 61

    WangS.ZhangC.HuH.XuJ.ZhangJ.ZhouW.et al (2024). GRK2 protein mediates the ANRIL, a lncRNA, to affect the proliferation and apoptosis of kasumi-1 cells. Front. Biosci.29, 362. 10.31083/j.fbl2910362

  • 62

    WangT.ChenS.AnH.ZhouL. (2023c). Expression and clinical significance of lncRNA CRNDE and miR-384 in peripheral blood of patients with acute leukemia. Lab. Med.38, 68669116. 10.3969/j.issn.1673-8640.2023.07.013

  • 63

    WangX.LiW.ChenY.ZhouL. (2021). Long non-coding RNA SNHG14 affects the proliferation and apoptosis of childhood acute myeloid leukaemia cells by modulating the miR-193b-3p/MCL1 axis. Mol. Med. Rep.23, 90. 10.3892/mmr.2020.11729

  • 64

    WangX.ZhangL.ZhaoF.XuR.JiangJ.ZhangC.et al (2018). Long non-coding RNA taurine-upregulated gene 1 correlates with poor prognosis, induces cell proliferation, and represses cell apoptosis via targeting aurora kinase A in adult acute myeloid leukemia. Ann. Hematol.97, 13751389. 10.1007/s00277-018-3315-8

  • 65

    WilsonC.SharmaD.SwaroopP.KumarS.BakhshiS.SharawatSk (2023). Expression of long non-coding RNA UCA1 and its clinical relevance in paediatric acute myeloid leukemia. Am. J. blood Res.13, 8493.

  • 66

    WiluszJ. E.SunwooH.SpectorD. L. (2009). Long noncoding RNAs: functional surprises from the RNA world. Genes and Dev.23 (13), 14941504. 10.1101/gad.1800909

  • 67

    WuS.ZhengC.ChenS.CaiX.ShiY.LinB.et al (2015). Overexpression of long non-coding RNA HOTAIR predicts a poor prognosis in patients with acute myeloid leukemia. Oncol. Lett.10, 24102414. 10.3892/ol.2015.3552

  • 68

    XiaoQ.LinC.PengM.RenJ.JingY.LeiL.et al (2022). Circulating plasma exosomal long non-coding RNAs LINC00265, LINC00467, UCA1, and SNHG1 as biomarkers for diagnosis and treatment monitoring of acute myeloid leukemia. Front. Oncol.12, 1033143. 10.3389/fonc.2022.1033143

  • 69

    XieH.MaB.GaoQ.ZhanH.LiuY.ChenZ.et al (2018). Long non-coding RNA CRNDE in cancer prognosis: review and meta-analysis. Clin. chimica acta; Int. J. Clin. Chem.485, 262271. 10.1016/j.cca.2018.07.003

  • 70

    YanH.WangZ.SunY.HuL.BuP. (2021). Cytoplasmic NEAT1 suppresses AML stem cell self-renewal and leukemogenesis through inactivation of Wnt signaling. Adv. Sci. Weinheim, Baden-Wurttemberg, Ger.8, e2100914. 10.1002/advs.202100914

  • 71

    YangL.ZhouJ. D.ZhangT. J.MaJ. C.XiaoG. F.ChenQ.et al (2018). Overexpression of lncRNA PANDAR predicts adverse prognosis in acute myeloid leukemia. Cancer Manag. Res.10, 49995007. 10.2147/CMAR.S180150

  • 72

    ZhouL.ZhangC.WangL.JiJ. (2020). Expression of lncRNA NEAT1 in peripheral blood and its association with prognosis in patients with acute myeloid leukemia. Mod. Med.48, 573578. 10.3969/j.issn.1671-7562.2020.05.003

  • 73

    ZhouW.XuS.ChenX.WangC. (2021). HOTAIR suppresses PTEN via DNMT3b and confers drug resistance in acute myeloid leukemia. Hematol. Amst. Neth.26, 170178. 10.1080/16078454.2021.1880733

  • 74

    ZouA.WangY. (2024). Expression levels of lncRNA DANCR and lncRNA SNHG7 in serum and their correlation with pathological features and prognosis in patients with acute myeloid leukemia. J. Marked Immunol. Analysis Clin.31, 253258.18. 10.11748/bjmy.issn.1006-1703.2024.02.012

Summary

Keywords

long noncoding RNA (LncRNA), acute myeloid leukemia (AML), prognosis, meta-analysis, review-systematic

Citation

Liu G, Sun L, Lv P, Qiao R, Wang L and Jin A (2025) Systematic review and meta-analysis of the impact of abnormal expression of long non coding RNA on the prognosis of acute myeloid leukemia. Front. Genet. 16:1524449. doi: 10.3389/fgene.2025.1524449

Received

08 November 2024

Accepted

13 January 2025

Published

04 February 2025

Volume

16 - 2025

Edited by

Giovanni Nigita, The Ohio State University, United States

Reviewed by

Xueyuan Cao, University of Tennessee Health Science Center (UTHSC), United States

Doron Tolomeo, University of Bari Aldo Moro, Italy

Updates

Copyright

*Correspondence: Arong Jin,

†These authors share first authorship

Disclaimer

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.

Outline

Figures

Cite article

Copy to clipboard


Export citation file


Share article

Article metrics