CASE REPORT article

Front. Genet., 28 February 2025

Sec. Genetics of Common and Rare Diseases

Volume 16 - 2025 | https://doi.org/10.3389/fgene.2025.1528563

Case Report: A case of progressive encephalopathy with or without lipodystrophy caused by BSCL2 variant and literature review

  • 1. Department of Neurology, Guangdong Sanjiu Brain Hospital, Guangzhou, China

  • 2. Department of Pediatric Neurology, Guangdong Women and Children Hospital, Guangzhou, China

Abstract

Objectives:

To describe a case of Progressive Encephalopathy with or without Lipodystrophy (PELD), characterized by a late onset of neurological regression at 9 years old, due to a homozygous c.974dupG variant in the BSCL2 gene.

Methods:

An 11-year, 9-month-old girl with repeated seizures over 2 years underwent clinical assessment and genetic investigation. We also reviewed the published literature.

Results:

The patient exhibited mild intellectual disability, a lipodystrophic appearance, precocious puberty, voracious appetite, elevated transaminase levels, hyperlipidemia, hypercortisolism, hepatomegaly, fatty liver, and splenomegaly. Motor and cognitive regression occurred at 9 years. A homozygous pathogenic variant c.974dup (p.Ile326HisfsTer12) in exon 7 of BSCL2 (NM_001122955.4) was identified. Despite multiple antiseizure medications, seizures were refractory, leading to status epilepticus and rapid death after genetic diagnosis.

Conclusion:

We confirm that the BSCL2 c.974dupG variant is a cause of PELD. Regression may occur later than previously reported. Literature review suggests that the c.974dupG variant may present a milder phenotype compared to the classic c.985C>T variant. Early genetic testing and diagnosis are crucial for improving outcomes in rare neurodegenerative disorders like PELD.

Introduction

The BSCL2 gene is located on the long arm of chromosome 11 at position 11q13. It encodes the protein seipin, an integral membrane protein of the endoplasmic reticulum (ER). The gene is highly expressed in the brain (), encoding three main seipin isoforms: 462 (BSCL2-203), 398 (BSCL2-205/207/210) and 287 (BSCL2-201) amino acids long, respectively (). Biallelic mutation in the BSCL2 gene can cause progressive encephalopathy with or without lipodystrophy (PELD; MIM: #615924) and congenital generalized lipodystrophy type 2 (CGL2; MIM: #269700). Heterozygous mutations in the BSCL2 gene can cause distal hereditary motor neuronopathy type VC(HMND13; MIM: #619112) and Silver syndrome (SPG17; MIM: #270685). PELD, also known as Celia’s encephalopathy, is a rare and severe neurodegenerative disorder. It is characterized by developmental regression of motor and cognitive skills before the age of 5, often leading to death within the first decade. Patients may exhibit a mild or typical lipodystrophic appearance (). The variant c.985C>T is considered the classic genotype (). However, other variants in BSCL2 associated with severe neurodegenerative manifestations have been reported, some of which resemble PELD. We report a patient with PELD due to a homozygous c. 974dupG variant in the BSCL2 gene, who experienced motor and cognitive regression at 9 years old. We also review the features of all published PELD patients.

Methods

The study was approved by the ethics review committee of Guangdong Sanjiu Brain Hospital and conducted according to the Helsinki Declaration’s ethical guidelines. Consent for disclosure was obtained from the patient’s parents. We also reviewed published literature.

Results

Case description

An 11-year, 9-month-old girl was hospitalized in June 2024, due to repeated seizures over 2 years. She was born to non-consanguineous parents in Guangdong Province, China. The pregnancy and delivery were uneventful. Mild intellectual disability was noted at 30 months. In infancy, she exhibited a lipodystrophic appearance and acanthosis nigricans. She experienced precocious puberty, voracious appetite, elevated transaminase levels, hyperlipidemia, hypercortisolism, hepatomegaly, fatty liver, and splenomegaly. At 9 years old, the patient experienced epileptic seizures characterized by generalized tonic-clonic seizures (GTCS) and myoclonus. The seizures were refractory despite treatment with levetiracetam and topiramate. She experienced a status epilepticus (SE) episode lasting approximately 10 h. At that time, the patient demonstrated psychomotor regression. She exhibited motor deterioration, ataxia, action myoclonus, tremors, reduced speech, dysarthria, and sleep disturbances. By 11 years and 9 months, the patient could only speak single words and had no independent gait, requiring assistance for eating, bathing, and toileting. Physical examination revealed marked generalized lipoatrophy, hypotonia, ataxia, and action myoclonus. Video electroencephalography (VEEG) indicated a slow background and diffuse epileptiform discharges. Frequent myoclonus was recorded (Figure 1). Brain MRI indicated diffuse brain atrophy, particularly in the caudate nucleus (Figure 2). Gynecological ultrasound indicated a small uterine volume. Blood glucose, lipids, lactic acid, urine organic acids, electrocardiogram, echocardiogram, and abdominal ultrasound were unremarkable. After obtaining informed consent from the parents, whole exome sequencing was conducted. Genetic analysis revealed a homozygous pathogenic frameshift variant in BSCL2 (NM_001122955.4:c.974dup; p.Ile326HisfsTer12), classified as pathogenic according to ACMG guidelines, with both parents identified as heterozygous carriers. Clonazepam and perampanel were successively prescribed, providing transient seizure control. Seizure occurrences gradually increased and progressed to SE on July 23rd. She died at the age of 11 years and 11 months from SE on July 25th.

FIGURE 1

FIGURE 2

Review of previous cases

Clinical, imaging and genetic findings of our patient and the other 23 reported PELD patients are summarized in Tables 1, 2 (; ; ; ; ; ; ; ; ; ; ; ; ; ).

TABLE 1

CaseVariantGenotypeNationSexAge of neurological symptoms onsetAge of regressionNeurological symptomsSeizure typeLipodystrophic appearanceReference
1985C>T; 538G>TCompound heterozygoteSpainM3 years4 yearsHyperactivity, cognitive impairment, language delay, tremor, seizures, dystonia, dysphagiaMyoclonus, focal and generalised seizuresY
2985C>T; 509_513delCompound heterozygoteSpainF2 yearsN. R.Developmental delay, neurological regression, seizuresMyoclonusY
3985C>T; 507_511delCompound heterozygoteSpainM2 years5 yearsAbnormal communication skills, language delay, hyperactivity, seizures, cognitive impairment, ataxic gaitMyoclonus, focal seizures, GTCSY
4985C>T; 507_511delCompound heterozygoteSpainM3 yearsN. R.Hyperactivity, language delay, seizuresMyoclonusY
5985C>T; 507_511delCompound heterozygoteSpainF3.5 yearsno regressionPsychomotor delayNoneY
6985C>T; 1004A>CCompound heterozygoteSpainF3 yearsN. R. (before 6y)Anxiety, irritability, strabismus, dystonic hypertonia, extrapyramidal and pyramidal features, dysphagia, parkinsonism, frontal lobe syndrome, dementiaNoneN
7985C>THomozygoteSpainF2 years3 yearsCognitive impairment, ataxic gait, tremor, dystonia, sleep disturbances, seizures, tetraparesisGTCS, myoclonusN
8985C>THomozygoteSpainFbefore 19 months5 yearsDevelopmental delay, irritability, dysphagia, sleep disturbances, pyramidal signsMyoclonusN
9985C>THomozygoteIranianM2 yearsN. R.Hyperactivity, autistic, ataxia, generalized hypertonia, global developmental delayNCSE, convulsive epilepsyY
10974dupG; 757G>TCompound heterozygoteChinaMN. R.no regressionDystonia, mild intellectual disabilityNoneY
11974dupG; 1020_1021delAACompound heterozygoteItalyM1 years5 yearsDevelopmental delay, ataxic gait, intention myoclonus, pyramidal signs, loss of language, intellectual impairment, dystonic tetraplegiaAbsence seizures with myoclonia or eyelid myoclonia, myoclonusY
12974dupG; 1015C>TCompound heterozygoteSpainF2 yearsno regressionSpeech delayNoneY
13974dupGHomozygoteChinaM1–2 years5 yearsPsychomotor delay, hyperactivity, irritability, unstable walking, tremor, dysarthria, cognitive regressionAbsence seizures, atonic seizures, myoclonic-atonic seizures, myoclonusY
14974dupGHomozygoteChinaM3 years15 yearsDystonic hypertonia, involuntary shaking of the body, opisthotonus, seizuresMyoclonusY
15974dupGHomozygoteItalyF3 years6 yearsIntellectual disability, continuous erratic myoclonias, pyramidal signs, cognitive decline, tetrapareticAbsence seizures with eyelid myoclonia, myoclonic-atonic seizuresY
16974dupGHomozygoteItalyFN. R. (early childhood)5 yearsIntellectual disability, cognitive decline, progressively increasing myoclonus, pyramidal signs, tetraparesis, intellectual disabilityAbsence seizures with eyelid myoclonia, myoclonic-atonic seizuresY
17974dupGHomozygoteSpainF18 months6 yearsLanguage delay, stereotyped movements, progressive motor, language, and cognitive deterioration, dysphagia, seizuresMyoclonus, GTCSY
18974dupGHomozygoteChinaF30 months9 yearsSeizures, developmental delay, language and motor regression, tremor, sleep disturbances, ataxic gait, myoclonusGTCS, myoclonusYOur case
19566T>AHeterozygoteSpainM6 monthsN. R.Seizures, intellectual disability, autism spectrum disorder, ataxic gaitGTCS, absences with eyelid myoclonia, atonic seizuresN
20566T>AHeterozygoteSpainF3 months8 monthsSeizures, psychomotor delaySpasms, SEN
211048C>THomozygoteItalyFN. R.5 yearsLanguage delay, irritability, psychomotor agitation, progressive language impairment, bulbar signs, lost gaitMyoclonus, sGTCSY
221048C>THomozygoteItalyFN.R.5 yearsLanguage delay, irritability, psychomotor agitation, progressive language impairment, bulbar signs, lost gaitMyoclonus, sGTCSY
23445C>GHeterozygoteUSAM2 weeks7 yearsSeizuresSpasms, SEN
241076dupCHomozygoteMacedoniayM1 years3 yearsPsychomotor delay, hyperactivity, ataxic gate, seizuresGeneralized tonic seizures, absence seizures with eyelid myoclonia, NCSEY,

Clinical features of PELD patients (part 1).

F: female. M: male. GTCS: generalized tonic-clonic seizures. SE: status epilepticus. NCSE: Non convulsive status epilepticus. Y: Yes. N: No. N. R.: Not reported.

TABLE 2

CaseVariantOther non-neurological symptomsTreatmentAge of decease (cause) or Age of last follow-upBrain MREEGReference
1985C>T; 538G>TNoneN. R.8 years (SE)NormalGeneralised spike
2985C>T; 509_513delHepatomegaly, hypertriglyceridemia, hyperinsulinemia, hypertransaminasemia, low plasma leptin levelsMetreleptin, diet rich in PUFA, omega-3 fatty acid supplementation, ASMssurvival at 7 years 10 monthsAtrophy of caudate nuclei, thalami and outer capsules, hypersignal of periventricular white matterFrequent bursts of spike activity at both central-parieto-temporo-occipital lobes
3985C>T; 507_511delNoneN. R.7 years (respiratory infection)N. R.N. R.
4985C>T; 507_511delHepatomegaly, hypertriglyceridaemiaN. R.7 years (respiratory infection)N. R.N. R.
5985C>T; 507_511delNoneN. R.survival at 11 yearsN. R.N. R.
6985C>T; 1004A>CNonelevodopa28 years (pneumonia)Caudate nucleus atrophyNormal
7985C>THepatomegaly, hypertriglyceridaemia, coarse facies, striking muscle induration of the limbsN. R.8 years (aspiration pneumonia)Subcortical atrophyMultifocal and sporadic generalised spike
8985C>TNoneN. R.6 years (N. R.)N. R.N. R.
9985C>THypertrichosisASMs8 years (SE)An arachnoid cyst in the left hippocampusNCSE
10974dupG; 757G>TDiabetes, hypertriglyceride, fatty liver, splenomegalyN. R.survival at 28 yearsNormalN. R.
11974dupG; 1020_1021delAAFeeding problems, reduced alertness, hypertriglyceridemia, hypertransaminasemia, hepatic steatosis, hypertrophic cardiomyopathylow-fat diet, ASMs9 years 10 months (cachexia)Progressive cortico-subcortical cerebral atrophy, particularly involving the caudate head and the lenticulate nucleus, hypersignal of subcortical structures and periventricular white matterTheta activity and diffuse spike; Background activity deterioration, nearly continuous myoclonic, photoparoxysmal response
12974dupG; 1015C>TFailure-to-thrive, hypertriglyceridemia, liver steatosisMetreleptinsurvival at 2 yearsN. R.N. R.
13974dupGHepatomegaly, hepatic Insufficiency, insulin resistanceLow fat and low glycemic index diet, hypoglycemic drugs, ASMssurvival at 5 years 8 monthsN. R.Multifocal and generalized spike
14974dupGUnable to feedASMssurvival at 17 yearsCerebral atrophy, basal ganglia atrophyFocal epileptiform discharges
15974dupGHepatomegaly, skin hyperpigmentation, reduced alertness, hypertriglyceridemia, cardiomegalyN. R.7 years 9 months (N. R.)Enlarged ventricles and liquoral spaces (pneumoencephalography)Multifocal or diffuse spike
16974dupGHypertriglyceridemiaN. R.11 years 10 months (N. R.)Diffuse cerebral atrophy, with marked involvement of caudate and lenticular nucleiBackground activity deterioration, increasing action myoclonus
17974dupGHepatomegaly, hypertriglyceridemia, feeding difficulties, hyporeactive, somnolentASMs9 years 9 months (N. R.)Progressive atrophy of striated regionsDiffuse theta and delta waves and low-voltage beta rhythm and multifocal epileptiform anomalies
18974dupGHypertriglyceridaemia, splenomegaly, fatty liverASMs11 years (SE)Cerebral atrophySlow background, focal and diffuse spikeOur case
19566T>ANoneKetogenic diet, ASMssurvival at 10 yearsNormalSlow background, focal and generalized spike
20566T>ANoneASMs10 months (SE)NormalSlow background, multifocal epileptiform activity
211048C>TCoarse facial features, synophrys, bulbous nasal tip, large ear pinnae, wide mouth, long fingers and toes, and hypertrichosisASMssurvival at 15 yearsHyperintensity and shrinkage of the putamen and caudate head, ventricular system enlargementSlow background, multifocal and diffuse spike, cortical myoclonia
221048C>TCoarse facial features, synophrys, bulbous nasal tip, large ear pinnae, wide mouth, long fingers and toes, and hypertrichosisASMs18 years (N. R.)Hyperintensity and shrinkage of the putamen and caudate head, ventricular system enlargementSlow background, multifocal and diffuse spike, cortical myoclonia
23445C>GNoneASMs7 months (N. R.)NormalSlowed and disorganized background, multifocal and generalized spike
241076dupCHypertriglyceridaemia, hypertransaminasaemiaMetreleptin, low-fat diet, ASMs, VNSsurvival at 7 yearsNormalAbnormal background activity, photosensitivity, diffuse origin during ictal period,

Clinical features of PELD patients (part 2).

ASMs: antiseizure medications. SE: status epilepticus. N. R.: Not reported.

The patient cohort consisted of 11 males and 13 females, with cases distributed as follows: 12 from Spain, 5 from Italy, 4 from China, 1 from the United States, 1 from Iran, and 1 from Macedonia. 79.2% (19/24) of patients had neurological symptoms before the age of 3. (87.5%) 21 of cases experienced regression, with 14 regressing before the age of 6. 75% (18/24) of cases exhibited a lipodystrophic appearance. The cohort included homozygous (12/24), compound heterozygous (9/24), and heterozygous cases (3/24), with the c.985C>T and c.974dupG variants being the most common mutations. 15 patients died prematurely, with 11 dying before the age of 10. Nine patients were alive, with the oldest reported being 28 years old.

Discussion

This study reports a girl with PELD caused by a c.974dupG biallelic mutation in the BSCL2 gene. A literature review revealed no gender differences among individuals with PELD. These cases were commonly reported in European and Asian countries. Most patients exhibited neurological symptoms before the age of 3 and experienced regression before the age of 6. Developmental delay and neurological regression were the most common neurological symptoms. The prognosis was poor, with most patients dying prematurely. Typical imaging showed brain atrophy, primarily in the caudate nucleus, and EEG findings indicated a slow background with multifocal or generalized epileptiform discharges.

Our case presents unique features including late-onset regression at 9 years old, rapid progression to death within 2 years after regression, and the presence of both lipodystrophic appearance and PME symptoms, which distinguishes it from previously reported cases. Among the documented cases, a notable c.974dupG mutation carrier manifested neurological regression at 15 years of age, representing the latest reported onset in the literature (). Remarkably, the longest documented survival was observed in a 28-year-old patient harboring the same mutation (). These clinical observations collectively suggest that individuals with c.974dupG mutation exhibit delayed disease progression and extended survival compared to c.985C>T mutation carriers, potentially reflecting the differential impact of these variants on BSCL2 function.

The pathogenesis of Celia’s encephalopathy involves abnormal splicing of BSCL2 gene, leading to exon 7 skipping. This results in increased expression of BSCL2-201 transcript, which generates truncated seipin protein. The accumulation of aberrant seipin induces endoplasmic reticulum (ER) stress and the formation of intranuclear aggregates, ultimately triggering neuronal apoptosis (). Notably, patients with c.974dupG mutation exhibit lower expression of BSCL2-201 transcript compared to c.985C>T carriers (), correlating with relatively milder neurological manifestations. In this case, the progression from regression to death was rapid, with the cause of death being SE. SE was common in PELD and always difficult to treat, having been the cause of death in at least four reported cases (; ; ).

Epilepsy was common in PELD, affecting 20 out of 24 patients. Among these, myoclonic seizures were the most common type. The high expression of the BSCL2 gene in the brain and the widespread deposition of aberrant protein may contribute to this phenomenon. The presence of myoclonic seizures, ataxia, and progressive neurological deterioration in this patient supports the diagnosis of Progressive Myoclonus Epilepsy (PME). This finding strengthens the evidence for the coexistence of PME and BSCL2 mutations, as previously suggested in the literature (; ; ; ). In the literature review, we found that PME is underdiagnosed in PELD. Therefore, we propose that PELD should be considered as one of the PMEs. The BSCL2 gene should be considered in gene panels for PME diagnostics.

All patients with 974dupG, 1048C>T, and 1076dupC variants displayed a lipodystrophic appearance. In contrast, those with the 445C>G and 566T>A heterozygous variants did not, while the phenotype for patients with the 985C>T variant remains uncertain. This suggests a potential link between genotype and lipodystrophic appearance. Given the small number of cases, this link still needs further investigation. We found that both compound heterozygotes and homozygotes may or may not display a lipodystrophic appearance, indicating that these features are independent of zygosity type, which is inconsistent with previous studies ().

It has been reported that leptin-replacement therapy delayed neurological regression or allowed better seizure control in patients with PELD (; ; ). Unfortunately, the patient died 23 days after genetic cause confirmation, highlighting the importance of early diagnosis. Early genetic testing and diagnosis are crucial for improving outcomes in rare neurodegenerative disorders like PELD.

Statements

Data availability statement

The original contributions presented in the study are included in the article/supplementary material, further inquiries can be directed to the corresponding author/s.

Ethics statement

The studies involving humans were approved by the ethics review committee of Guangdong Sanjiu Brain Hospital. The studies were conducted in accordance with the local legislation and institutional requirements. Written informed consent for participation in this study was provided by the participants’ legal guardians/next of kin. Written informed consent was obtained from the individual(s), and minor(s)’ legal guardian/next of kin, for the publication of any potentially identifiable images or data included in this article.

Author contributions

YW: Conceptualization, Data curation, Investigation, Methodology, Software, Writing–original draft, Writing–review and editing. JG: Supervision, Writing–review and editing. PZ: Data curation, Writing–review and editing. FL: Investigation, Writing–review and editing. HL: Conceptualization, Supervision, Writing–review and editing.

Funding

The author(s) declare that no financial support was received for the research, authorship, and/or publication of this article.

Acknowledgments

We would like to thank the patient for permission of using her clinical data shown in this report.

Conflict of interest

The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.

Generative AI statement

The authors declare that no Generative AI was used in the creation of this manuscript.

Publisher’s note

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article, or claim that may be made by its manufacturer, is not guaranteed or endorsed by the publisher.

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Summary

Keywords

BSCL2 gene, progressive encephalopathy with or without lipodystrophy, celia’s encephalopathy, progressive myoclonus epilepsy, neurological regression

Citation

Wang Y, Guo J, Zhang P, Liu F and Li H (2025) Case Report: A case of progressive encephalopathy with or without lipodystrophy caused by BSCL2 variant and literature review. Front. Genet. 16:1528563. doi: 10.3389/fgene.2025.1528563

Received

15 November 2024

Accepted

10 February 2025

Published

28 February 2025

Volume

16 - 2025

Edited by

David Araujo-Vilar, University of Santiago de Compostela, Spain

Reviewed by

Lourdes Loidi, Galician Public Foundation of Genomic Medicine, Spain

Josivan Gomes Lima, Federal University of Rio Grande do Norte, Brazil

Updates

Copyright

*Correspondence: Hua Li,

Disclaimer

All claims expressed in this article are solely those of the authors and do not necessarily represent those of their affiliated organizations, or those of the publisher, the editors and the reviewers. Any product that may be evaluated in this article or claim that may be made by its manufacturer is not guaranteed or endorsed by the publisher.

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