Frontiers in Genetics | Computational Genomics

Original Research

Published on 12 Apr 2023

Multiple epigenetic modification profiles reveal the tumor immune microenvironment and clinical outcomes of uveal melanoma

in Computational Genomics

Xinshuai Nan
Yuchen Liu
Yuzhen Gao
Xinshan Nan

Frontiers in Genetics

doi 10.3389/fgene.2023.1155199

1,855 views
2 citations

Original Research

Published on 11 Apr 2023

Gene filtering strategies for machine learning guided biomarker discovery using neonatal sepsis RNA-seq data

in Computational Genomics

Edward Parkinson
Federico Liberatore
W. John Watkins
Robert Andrews
Sarah Edkins
Julie Hibbert
Tobias Strunk
Andrew Currie
Peter Ghazal

Frontiers in Genetics

doi 10.3389/fgene.2023.1158352

7,412 views
3 citations

Original Research

Published on 06 Apr 2023

ProgClust: A progressive clustering method to identify cell populations

in Computational Genomics

Han Li
Ying Wang
Yongxuan Lai
Feng Zeng
Fan Yang

Frontiers in Genetics

doi 10.3389/fgene.2023.1183099

2,121 views
3 citations

Original Research

Published on 06 Apr 2023

RETRACTED: Bioinformatics analysis based on crucial genes of endothelial cells in rheumatoid

in Computational Genomics

Xing Zhou
Lidong Wu

Frontiers in Genetics

doi 10.3389/fgene.2023.1143644

2,363 views
3 citations

Original Research

Published on 06 Apr 2023

OncoRTT: Predicting novel oncology-related therapeutic targets using BERT embeddings and omics features

in Computational Genomics

Maha A. Thafar
Somayah Albaradei
Mahmut Uludag
Mona Alshahrani
Takashi Gojobori
Magbubah Essack
Xin Gao

Frontiers in Genetics

doi 10.3389/fgene.2023.1139626

2,827 views
4 citations

Original Research

Published on 06 Apr 2023

Identification of featured necroptosis-related genes and imbalanced immune infiltration in sepsis via machine learning

in Computational Genomics

Han She
Lei Tan
Ruibo Yang
Jie Zheng
Yi Wang
Yuanlin Du
Xiaoyong Peng
Qinghui Li
Haibin Lu
Xinming Xiang

Frontiers in Genetics

doi 10.3389/fgene.2023.1158029

3,714 views
9 citations

Methods

Published on 04 Apr 2023

MulCNN: An efficient and accurate deep learning method based on gene embedding for cell type identification in single-cell RNA-seq data

in Computational Genomics

Linfang Jiao
Yongqi Ren
Lulu Wang
Changnan Gao
Shuang Wang
Tao Song

Frontiers in Genetics

doi 10.3389/fgene.2023.1179859

4,249 views
5 citations

Editorial

Published on 03 Apr 2023

Editorial: Identifying genetics-based mechanisms and treatments for neurodevelopmental and psychiatric disorders through data integration

in Computational Genomics

Kaifang Pang
Li Wang
Suhua Chang

Frontiers in Genetics

doi 10.3389/fgene.2023.1186489

1,695 views

Original Research

Published on 03 Apr 2023

Prediction of CTCF loop anchor based on machine learning

in Computational Genomics

Xiao Zhang
Wen Zhu
Huimin Sun
Yijie Ding
Li Liu

Frontiers in Genetics

doi 10.3389/fgene.2023.1181956

2,551 views
1 citation

Original Research

Published on 31 Mar 2023

A novel cuproptosis-related lncRNAs signature predicts prognostic and immune of bladder urothelial carcinoma

in Computational Genomics

Zheng Zhou
Yusong Zhou
Wei Liu
Jing Dai

Frontiers in Genetics

doi 10.3389/fgene.2023.1148430

3,318 views
3 citations

Original Research

Published on 29 Mar 2023

Genomics combined with UAS data enhances prediction of grain yield in winter wheat

in Computational Genomics

Osval A. Montesinos-López
Andrew W. Herr
José Crossa
Arron H. Carter

Frontiers in Genetics

doi 10.3389/fgene.2023.1124218

2,066 views
7 citations

Original Research

Published on 29 Mar 2023

Use of pain-related gene features to predict depression by support vector machine model in patients with fibromyalgia

in Computational Genomics

Fengfeng Wang
Chi Wai Cheung
Stanley Sau Ching Wong

Frontiers in Genetics

doi 10.3389/fgene.2023.1026672

1,797 views
5 citations

Original Research

Published on 29 Mar 2023

ACP-GBDT: An improved anticancer peptide identification method with gradient boosting decision tree

in Computational Genomics

Yanjuan Li
Di Ma
Dong Chen
Yu Chen

Frontiers in Genetics

doi 10.3389/fgene.2023.1165765

5,942 views
14 citations

Original Research

Published on 27 Mar 2023

PredDSMC: A predictor for driver synonymous mutations in human cancers

in Computational Genomics

Lihua Wang
Jianhui Sun
Shunshuai Ma
Junfeng Xia
Xiaoyan Li

Frontiers in Genetics

doi 10.3389/fgene.2023.1164593

2,098 views
1 citation

Technology and Code

Published on 27 Mar 2023

A framework for real-time monitoring, analysis and adaptive sampling of viral amplicon nanopore sequencing

in Computational Genomics

Rory Munro
Nadine Holmes
Christopher Moore
Matthew Carlile
Alexander Payne
John R. Tyson
Thomas Williams
Christopher Alder
Luke B. Snell
Gaia Nebbia

Frontiers in Genetics

doi 10.3389/fgene.2023.1138582

5,735 views
12 citations

Editorial

Published on 27 Mar 2023

Editorial: The use of data mining in radiological-pathological images for personal medicine

in Computational Genomics

Jincheng Wang
Xudong Zhang
Jinhui Liu
Yin Yin

Frontiers in Genetics

doi 10.3389/fgene.2023.1187040

1,311 views