Frontiers in Genetics | Genomics of Plants and the Phytoecosystem

Original Research

Published on 23 Nov 2023

Improving predictive ability in sparse testing designs in soybean populations

in Genomics of Plants and the Phytoecosystem

Reyna Persa
Caio Canella Vieira
Esteban Rios
Valerio Hoyos-Villegas
Carlos D. Messina
Daniel Runcie
Diego Jarquin

Frontiers in Genetics

doi 10.3389/fgene.2023.1269255

3,534 views
11 citations

Brief Research Report

Published on 22 Nov 2023

Genome of Linum usitatissimum convar. crepitans expands the view on the section Linum

in Genomics of Plants and the Phytoecosystem

Ekaterina M. Dvorianinova
Elena N. Pushkova
Nadezhda L. Bolsheva
Elena V. Borkhert
Tatiana A. Rozhmina
Daiana A. Zhernova
Roman O. Novakovskiy
Anastasia A. Turba
Elizaveta A. Sigova
Nataliya V. Melnikova

Frontiers in Genetics

doi 10.3389/fgene.2023.1269837

2,260 views
4 citations

Original Research

Published on 20 Nov 2023

Genome-wide association study (GWAS) with high-throughput SNP chip DNA markers identified novel genetic factors for mesocotyl elongation and seedling emergence in rice (Oryza sativa L.) using multiple GAPIT models

in Genomics of Plants and the Phytoecosystem

Nkulu Rolly Kabange
Simon Alibu
Youngho Kwon
So-Myeong Lee
Ki-Won Oh
Jong-Hee Lee

Frontiers in Genetics

doi 10.3389/fgene.2023.1282620

6,005 views
2 citations

Original Research

Published on 20 Nov 2023

The role of WRKY transcription factors in exogenous potassium (K+) response to NaCl stress in Tamarix ramosissima

in Genomics of Plants and the Phytoecosystem

Yahui Chen
Xuanyi Zhang
Yunlong Fan
Dezong Sui
Jiang Jiang
Lei Wang

Frontiers in Genetics

doi 10.3389/fgene.2023.1274288

2,518 views
2 citations

Original Research

Published on 17 Nov 2023

Metabolome and transcriptome analyses provide new insights into the mechanisms underlying the enhancement of medicinal component content in the roots of Acanthopanax senticosus (Rupr. et Maxim.) Harms through foliar application of zinc fertilizer

in Genomics of Plants and the Phytoecosystem

Tongze Sun
Jialin Sun
Yuli Liu
Yanjun Ren
Yifeng Li
Chang Shi
Alyaa Nasr
Zhonghua Tang
Ann Abozeid

Frontiers in Genetics

doi 10.3389/fgene.2023.1259674

2,563 views
4 citations

Editorial

Published on 14 Nov 2023

Editorial: Evolution of abiotic stress responses in land plants

in Genomics of Plants and the Phytoecosystem

Diaa Abd El Moneim
Ana Luísa Garcia-Oliveira
Mahmoud Magdy

Frontiers in Genetics

doi 10.3389/fgene.2023.1321165

1,476 views

Original Research

Published on 10 Nov 2023

Integrative analysis of non-targeted metabolome and transcriptome reveals the mechanism of volatile formation in pepper fruit

in Genomics of Plants and the Phytoecosystem

Yuhua Liu
Jiahao Zhou
Cheng Yi
Fengqingyang Chen
Yan Liu
Yi Liao
Zhuqing Zhang
Wei Liu
Junheng Lv

Frontiers in Genetics

doi 10.3389/fgene.2023.1290492

3,949 views
13 citations

Original Research

Published on 09 Nov 2023

Genome-wide identification of the PFK gene family and their expression analysis in Quercus rubra

in Genomics of Plants and the Phytoecosystem

Tae-Lim Kim
Hyemin Lim
Michael Immanuel Jesse Denison
Sathishkumar Natarajan
Changyoung Oh

Frontiers in Genetics

doi 10.3389/fgene.2023.1289557

3,440 views
8 citations

Review

Published on 09 Nov 2023

Advancements and prospects of CRISPR/Cas9 technologies for abiotic and biotic stresses in sugar beet

in Genomics of Plants and the Phytoecosystem

Varucha Misra
A. K. Mall
Himanshu Pandey
Santeshwari Srivastava
Avinash Sharma

Frontiers in Genetics

doi 10.3389/fgene.2023.1235855

8,167 views
26 citations

Original Research

Published on 07 Nov 2023

Combination of linkage and association mapping with genomic prediction to infer QTL regions associated with gray leaf spot and northern corn leaf blight resistance in tropical maize

in Genomics of Plants and the Phytoecosystem

Dennis O. Omondi
Mathews M. Dida
Dave K. Berger
Yoseph Beyene
David L. Nsibo
Collins Juma
Suresh L. Mahabaleswara
Manje Gowda

Frontiers in Genetics

doi 10.3389/fgene.2023.1282673

4,309 views
17 citations

Original Research

Published on 02 Nov 2023

Transcriptome analysis of Artemisia argyi following methyl jasmonate (MeJA) treatment and the mining of genes related to the stress resistance pathway

in Genomics of Plants and the Phytoecosystem

Jing Wang
Yupeng Cui
Shuyan Li
Xinqiang Gao
Kunpeng Zhang
Xiangling Shen

Frontiers in Genetics

doi 10.3389/fgene.2023.1279850

3,141 views
6 citations

Original Research

Published on 02 Nov 2023

Evolutionary insights and expression dynamics of the CaNFYB transcription factor gene family in pepper (Capsicum annuum) under salinity stress

in Genomics of Plants and the Phytoecosystem

Diaa Abd El Moneim
Hassan Mansour
Rana M. Alshegaihi
Fatmah Ahmed Safhi
Khairiah Mubarak Alwutayd
Rahma Alshamrani
Amnah Alamri
Wessam Felembam
Amani Omar Abuzaid
Mahmoud Magdy

Frontiers in Genetics

doi 10.3389/fgene.2023.1288453

2,585 views
4 citations

Original Research

Published on 02 Nov 2023

Genome-wide identification of long non-coding RNAs and their potential functions in radish response to salt stress

in Genomics of Plants and the Phytoecosystem

Xiaochuan Sun
Mingjia Tang
Liang Xu
Xiaobo Luo
Yutong Shang
Weike Duan
Zhinan Huang
Cong Jin
Guodong Chen

Frontiers in Genetics

doi 10.3389/fgene.2023.1232363

2,239 views
4 citations

Original Research

Published on 26 Oct 2023

Discovery of genomic regions associated with grain yield and agronomic traits in Bi-parental populations of maize (Zea mays. L) Under optimum and low nitrogen conditions

in Genomics of Plants and the Phytoecosystem

Collins Kimutai
Noel Ndlovu
Vijay Chaikam
Berhanu Tadesse Ertiro
Biswanath Das
Yoseph Beyene
Oliver Kiplagat
Charles Spillane
Boddupalli M. Prasanna
Manje Gowda

Frontiers in Genetics

doi 10.3389/fgene.2023.1266402

3,688 views
7 citations

Editorial

Published on 26 Oct 2023

Editorial: Functional genomic approaches in molecular breeding for crop improvement

in Genomics of Plants and the Phytoecosystem

Sabrina M. Elias
Richard Malo
Zeba I. Seraj
Philomin Juliana

Frontiers in Genetics

doi 10.3389/fgene.2023.1301501

1,835 views
1 citation

Original Research

Published on 25 Oct 2023

Genome-wide association analysis of tan spot disease resistance in durum wheat accessions from Tunisia

in Genomics of Plants and the Phytoecosystem

Marwa Laribi
Rudolph Fredua-Agyeman
Sarrah Ben M’Barek
Carolina P. Sansaloni
Susanne Dreisigacker
Fernanda M. Gamba
Wided Abdedayem
Meriem Nefzaoui
Chayma Araar
Sheau-Fang Hwang

Frontiers in Genetics

doi 10.3389/fgene.2023.1231027

4,094 views
7 citations

Original Research

Published on 10 Oct 2023

Functional and ecological diversification of underground organs in Solanum

in Genomics of Plants and the Phytoecosystem

Edeline Gagnon
Ludwig Baldaszti
Peter Moonlight
Sandra Knapp
Caroline E. R. Lehmann
Tiina Särkinen

Frontiers in Genetics

doi 10.3389/fgene.2023.1231413

4,990 views
7 citations

Review

Published on 10 Oct 2023

Functional role of microRNA in the regulation of biotic and abiotic stress in agronomic plants

in Genomics of Plants and the Phytoecosystem

Ramkumar Samynathan
Baskar Venkidasamy
Ashokraj Shanmugam
Sathishkumar Ramalingam
Muthu Thiruvengadam

Frontiers in Genetics

doi 10.3389/fgene.2023.1272446

5,614 views
30 citations

Original Research

Published on 20 Sep 2023

Integrated omics and machine learning-assisted profiling of cysteine-rich-receptor-like kinases from three peanut spp. revealed their role in multiple stresses

in Genomics of Plants and the Phytoecosystem

Kinza Fatima
Muhammad Sadaqat
Farrukh Azeem
Muhammad Junaid Rao
Norah A. Albekairi
Abdulrahman Alshammari
Muhammad Tahir ul Qamar

Frontiers in Genetics

doi 10.3389/fgene.2023.1252020

4,017 views
13 citations

Original Research

Published on 19 Sep 2023

Identification of a novel locus C2 controlling canary yellow flesh color in watermelons

in Genomics of Plants and the Phytoecosystem

Girim Park
Durre Shahwar
Gaeun Jang
Jagyeong Shin
Gibeom Kwon
Younjae Kim
Chang Oh Hong
Bingkui Jin
Hoytaek Kim
Oakjin Lee

Frontiers in Genetics

doi 10.3389/fgene.2023.1256627

3,685 views
6 citations

Original Research

Published on 18 Sep 2023

Discovering useful genetic variation in the seed parent gene pool for sorghum improvement

in Genomics of Plants and the Phytoecosystem

Neeraj Kumar
J. Lucas Boatwright
Sirjan Sapkota
Zachary W. Brenton
Carolina Ballén-Taborda
Matthew T. Myers
William A. Cox
Kathleen E. Jordan
Stephen Kresovich
Richard E. Boyles

Frontiers in Genetics

doi 10.3389/fgene.2023.1221148

2,902 views
3 citations

Original Research

Published on 18 Sep 2023

Integration of the metabolome and transcriptome reveals the molecular mechanism of drought tolerance in Plumeria rubra

in Genomics of Plants and the Phytoecosystem

Rong Sun
Shan Liu
Jinglei Gao
Lihua Zhao

Frontiers in Genetics

doi 10.3389/fgene.2023.1274732

3,138 views
6 citations

Original Research

Published on 07 Sep 2023

De novo sequencing, assembly, and characterization of Asparagus racemosus transcriptome and analysis of expression profile of genes involved in the flavonoid biosynthesis pathway

in Genomics of Plants and the Phytoecosystem

Chanchal Malik
Sudhanshu Dwivedi
Tilahun Rabuma
Ravinder Kumar
Nitesh Singh
Anil Kumar
Rajesh Yogi
Vinod Chhokar

Frontiers in Genetics

doi 10.3389/fgene.2023.1236517

3,517 views
1 citation

Original Research

Published on 06 Sep 2023

Insights into the physiological, molecular, and genetic regulators of albinism in Camellia sinensis leaves

in Genomics of Plants and the Phytoecosystem

Yang Zhao
Peidi Yang
Yang Cheng
Yong Liu
Yang Yang
Zhen Liu

Frontiers in Genetics

doi 10.3389/fgene.2023.1219335

3,421 views
5 citations

904 articles

articles

Improving predictive ability in sparse testing designs in soybean populations

Genome of Linum usitatissimum convar. crepitans expands the view on the section Linum

Genome-wide association study (GWAS) with high-throughput SNP chip DNA markers identified novel genetic factors for mesocotyl elongation and seedling emergence in rice (Oryza sativa L.) using multiple GAPIT models

The role of WRKY transcription factors in exogenous potassium (K+) response to NaCl stress in Tamarix ramosissima

Metabolome and transcriptome analyses provide new insights into the mechanisms underlying the enhancement of medicinal component content in the roots of Acanthopanax senticosus (Rupr. et Maxim.) Harms through foliar application of zinc fertilizer

Editorial: Evolution of abiotic stress responses in land plants

Integrative analysis of non-targeted metabolome and transcriptome reveals the mechanism of volatile formation in pepper fruit

Genome-wide identification of the PFK gene family and their expression analysis in Quercus rubra

Advancements and prospects of CRISPR/Cas9 technologies for abiotic and biotic stresses in sugar beet

Combination of linkage and association mapping with genomic prediction to infer QTL regions associated with gray leaf spot and northern corn leaf blight resistance in tropical maize

Transcriptome analysis of Artemisia argyi following methyl jasmonate (MeJA) treatment and the mining of genes related to the stress resistance pathway

Evolutionary insights and expression dynamics of the CaNFYB transcription factor gene family in pepper (Capsicum annuum) under salinity stress

Genome-wide identification of long non-coding RNAs and their potential functions in radish response to salt stress

Discovery of genomic regions associated with grain yield and agronomic traits in Bi-parental populations of maize (Zea mays. L) Under optimum and low nitrogen conditions

Editorial: Functional genomic approaches in molecular breeding for crop improvement

Genome-wide association analysis of tan spot disease resistance in durum wheat accessions from Tunisia

Functional and ecological diversification of underground organs in Solanum

Functional role of microRNA in the regulation of biotic and abiotic stress in agronomic plants

Integrated omics and machine learning-assisted profiling of cysteine-rich-receptor-like kinases from three peanut spp. revealed their role in multiple stresses

Identification of a novel locus C2 controlling canary yellow flesh color in watermelons

Discovering useful genetic variation in the seed parent gene pool for sorghum improvement

Integration of the metabolome and transcriptome reveals the molecular mechanism of drought tolerance in Plumeria rubra

De novo sequencing, assembly, and characterization of Asparagus racemosus transcriptome and analysis of expression profile of genes involved in the flavonoid biosynthesis pathway

Insights into the physiological, molecular, and genetic regulators of albinism in Camellia sinensis leaves