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ORIGINAL RESEARCH article

Front. Mar. Sci.

Sec. Marine Biogeochemistry

Volume 12 - 2025 | doi: 10.3389/fmars.2025.1653421

Biogeochemistry of phytoplankton RuBisCO in the ocean

Provisionally accepted
  • Texas A and M University, College Station, United States

The final, formatted version of the article will be published soon.

Form I Ribulose-1,5-bisphosphate oxygenase/carboxylase (RuBisCO) is the most abundant enzyme on Earth, playing a key role in carbon fixation during oxygenic photosynthesis. Using published sequence data, I show that there are significant differences in the amount of elemental resources (C, N and S) and energy required to synthesize the different Types of Form I RuBisCO. The shorter amino acid lengths of cyanobacterial RuBisCO had lower resource requirements to build the holoenzyme compared with eukaryotes. Consequently, the rise to dominance of eukaryote phytoplankton during the Neoproterozoic (1000 - 541 Ma) led to a shift to more expensive eukaryote RuBisCO. There are also significant differences in the elemental composition of RuBisCO between eukaryotes in different supergroups. Estimates of resource allocation were used to estimate how much C, N and S is associated with RuBisCO in the modern ocean. The marine cyanobacterium Prochlorococcus is the most numerically abundant photosynthetic organism on Earth and accounts for 7.3 – 8.9 % of net ocean primary productivity. There are 2.11- 2.69 x 106 mol RuBisCO in Prochlorococcus, which amounts to 4 to 5 % of the total RuBisCO pool in the ocean. The relatively low RuBisCO content compared with productivity indicates highly efficient photosynthesis in Prochlorococcus. The total marine RuBisCO reservoir is equivalent to 0.016 Pg C, 5.1 Tg N, and 0.4 Tg S. The estimated annual productivity of RuBisCO is equivalent to 0.725 - 0.890 Pg C yr-1, 228 - 283 Tg N yr-1, and 16.5 - 22.5 Tg S yr-1. In the context of the marine nitrogen cycle, the amount of nitrogen fluxing through the pool of RuBisCO each year is equivalent to, or even higher, than the rate of biological nitrogen fixation (223 ± 30 Tg N yr−1). Turnover of RuBisCO is rapid, occurring every 6.6 to 8.2 days. In conclusion, RuBisCO is not only significant as the primary carbon fixation enzyme in the ocean, but also as a pool of chemical elements, particularly nitrogen.

Keywords: elemental stoichiometry, evolution, Nitrogen Cycle, Phanerozoic Eon, Photosynthesis, Prochlorococcus, Proterozoic Eon, Ribulose-1,5-bisphosphate oxygenase/carboxylase

Received: 25 Jun 2025; Accepted: 11 Sep 2025.

Copyright: © 2025 Thornton. This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

* Correspondence: Daniel Conrad Ogilvie Thornton, dthornton@tamu.edu

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