Abstract
Amyotrophic lateral sclerosis (ALS) is a severe neurodegenerative condition marked by the gradual loss of motor neurons in the brain and spinal cord. As the most common adult-onset motor neuron disease, ALS manifests through gradually worsening muscle weakness that ultimately progresses to complete paralysis. The disease presents in both sporadic and familial forms. Diagnosis is often delayed until substantial and irreversible motor neuron damage has already occurred. Clinical outcomes in ALS have only been defined through large-scale clinical trials with lengthy follow-up periods due to the disease’s inherent heterogeneity and the absence of disease-specific biomarkers. Current biomarker detection methods, such as invasive cerebrospinal fluid (CSF) analysis or advanced imaging, are impractical for routine use, particularly in late-stage ALS. Several blood-based biomarkers have shown promise, including neurofilament levels, cryptic RNA-derived peptides, and immune-mediated changes, which may enable non-invasive monitoring. Nevertheless, the development of these methods is hindered by technical challenges, such as blood matrix interference and low analyte abundance. Among the emerging biomarkers, neurofilament light chain (NfL) appears to be the most promising, as its concentrations change in line with disease progression and distinguish clinically relevant groups. NfL facilitates patient stratification based on clinical progression rates (e.g., rapid vs slow progressors), while cryptic exon-derived peptides, such as UNC13A-derived peptides, enable genetic stratification by identifying molecular subtypes linked to TDP-43 pathology (e.g., C9orf72 vs sporadic ALS). These biomarkers hold promise to optimize clinical trial design through enriched cohort selection and accelerating therapeutic translation by monitoring target engagement. In this review, we have summarized recent developments in ALS biomarker studies, focusing on neurofilaments in each biofluid, transcriptomic signatures, and neuroinflammatory biomarkers, emphasizing technical challenges surrounding reproducibility in measurement. Finally, we discussed the potential integration of these biomarkers into clinical practice to advance drug development through precision medicine, thereby enabling shorter and more targeted clinical trials.
1 Introduction
Amyotrophic lateral sclerosis (ALS), also known as Lou Gehrig’s disease, is a progressive neurological disorder that leads to the deterioration of nerve cells in the brain and spinal cord, ultimately causing muscle weakness and paralysis. ALS has an incidence rate of 2 to 3 per 100,000 worldwide, with a higher prevalence of 6–7 per 100,000 in Europe (). Tragically, most patients survive just 2–5 years after symptom onset, primarily due to complications from respiratory muscle deterioration (). ALS exhibits marked clinical and genetic heterogeneity, with survival ranging from 2 to over 30 years, and over 30 genes implicated in pathogenesis. This variability highlights the need for biomarkers that address distinct molecular subtypes. For instance, Mutations in SOD1 lead to misfolded protein aggregation in the cytoplasm, contributing to mitochondrial dysfunction (Tafuri et al., 2015), whereas C9orf72 hexanucleotide repeat expansions drive RNA toxicity via dipeptide repeat protein (DPR) accumulation and nucleocytoplasmic transport defects (; ). Typically, initial symptoms manifest between the ages of 55 and 65; however, the disease may also present in elderly individuals or younger populations (). The lack of early diagnostic tools and the average delay of 12–15 months before diagnosis significantly hinder timely intervention. This diagnostic bottleneck highlights the need to integrate biomarkers into clinical workflows.
ALS presents in two primary forms: familial and sporadic (). Familial cases, accounting for about 5%–10%, are associated with inherited genetic mutations, whereas the vast majority, 90%–95%, occur randomly without a clear hereditary pattern (). Riluzole was historically the sole approved drug, but additional therapies like edaravone and AMX0035 have since been approved in certain regions (). Non-invasive ventilation is an accepted intervention that enhances the quality of life and survival rates in patients with ALS (). Gastrostomy, sialorrhea management, multidisciplinary care, and assistive communication tools effectively improve the quality of life of patients (; ). These therapies have limited effectiveness, highlighting the urgent need for biomarkers to enable early diagnosis, guide treatment, and monitor disease progression ().
Significant advancements have been made in identifying potential biomarkers for ALS that could support early diagnosis, provide prognostic insights, and deepen understanding of disease progression (). Various targeted approaches, guided by known disease pathways, have been employed to uncover dysregulated molecular signatures. Meanwhile, untargeted approaches, such as large-scale proteomic and lipidomic profiling, have also yielded insights. Similar goals have been achieved by applying targeted methods that systematically examine biomolecules across various domains, including genomics, proteomics, glycomics, and lipidomics techniques (Turner et al., 2009). The biological substances used in the investigation included tissues from patients, encompassing biofluids such as blood, cerebrospinal fluid (CSF), and urine, as well as samples acquired from necropsy, specifically brain and spinal cord tissues. In vivo and in vitro models of ALS, based on identified mutations linked to the disease, have served as valuable sources for analysis. Different researchers have thoroughly examined various facets of biomarker research for ALS (Turner et al., 2013; ; Xu and Xu, 2024).
Biomarkers typically have multiple, often overlapping purposes (). Diagnostic biomarkers provide a tool to distinguish between genuine disease and false positives, and have great potential to predict the presentation of disease (Xu and Xu, 2024). In contrast, predictive or prognostic biomarkers can assess the risk of disease progression in patients and the likelihood of patient survival (Sun et al., 2020). Moreover, categorical biomarkers can characterize disease subsets and shed light on disease mechanisms. Clinical pharmacodynamic biomarkers that demonstrate therapeutic efficacy may reduce the need for placebo groups, thereby lowering participant numbers and the duration of clinical trials (). Recent advances in antisense oligonucleotide (ASO) therapies, such as tofersen (targeting SOD1) and BIIB105 (targeting C9orf72), underscore the critical role of biomarkers in enabling precision medicine (). For instance, NfL reduction in CSF correlates with tofersen’s pharmacodynamic effects in SOD1-ALS (), while poly-glycine-proline (poly-GP) DPR levels serve as target engagement biomarkers in C9orf72 trials (Wilson et al., 2022). However, widespread clinical adoption of these biomarkers requires harmonized assay standardization, cross-platform validation, and multicenter reproducibility studies to address variability in detection methodologies and ensure regulatory compliance (Steinbach et al., 2018; ). In this review, we have examined biomarkers for ALS in the context of emerging technologies and their potential implications for the treatment and management of ALS. Although no biomarker technology has been fully implemented as a primary outcome measure in clinical trials, several are now emerging as valuable adjunct tools, offering complementary support within clinical research and practice.
2 Diagnosis of ALS
Electrodiagnostic testing and clinical observation are the primary methods for diagnosing ALS (). Patients experience a decline in strength and functional capacity over time. A conclusive diagnosis requires clinical evidence of both lower and upper motor neuron (LMN and UMN) involvement to exclude disorders that mimic ALS (Štětkářová and Ehler, 2021). The LMN signs include muscular atrophy, weakness, and superficial fasciculations, while the UMN signs include rapid tendon reflexes, spasticity, and extensor plantar response (). The presence of fasciculation potentials (e.g., spontaneous electrical activity in muscle fibers) is also essential (). Transcranial magnetic stimulation (TMS) enables the evaluation of UMN involvement (Vucic et al., 2013). Although not yet widely used due to the need for specialized software, threshold tracking TMS has shown promise as a diagnostic tool in the past decade for detecting early signs of increased cortical excitability (). Advanced neuroimaging techniques are increasingly used to identify reliable and sensitive indicators of upper motor neuron (UMN) lesions in ALS (). Despite the abundance of possibilities, including magnetic resonance imaging (MRI), spectroscopy, volumetry, functional MRI (fMRI), diffusion-weighted imaging (DWI), and positron emission tomography, further progress is needed to establish a method that is effective for everyday clinical practice. Recent diagnostic innovations include digital biomarkers (e.g., voice/speech analysis, wearable sensors) and AI-driven MRI protocols to detect upper motor neuron involvement (Straczkiewicz et al., 2024).
3 Role of genetics in ALS pathogenesis
Genetic contributions are central to ALS development, with multiple genes identified in association with both familial and sporadic forms of the condition (). Table 1 summarizes the key genes associated with ALS susceptibility and progression (; ). The first gene identified in connection with ALS was superoxide dismutase 1 (SOD1), which encodes a copper-zinc-binding antioxidant enzyme (Wang et al., 2024). It accounts for approximately 20% of familial cases, although there is considerable variation across nations. Notably, disease-causing mutations have been identified throughout the SOD1 protein, not only the metal-binding site (). To date, over 170 unique pathogenic variants of SOD1 have been reported (http://ghr.nlm.nih.gov/gene/SOD1). Such genetic mutations frequently lead to aberrant protein folding and the formation of insoluble SOD1 aggregates, which predominantly accumulate in the cytoplasm of motor neurons (). These aggregates disrupt normal cellular homeostasis by impairing essential processes such as mitochondrial function, axonal transport, and proteasomal degradation (). The resulting cellular stress contributes to motor neuron dysfunction and eventual cell death, hallmark features of ALS pathology (). Beyond SOD1, several other genes linked to RNA and DNA metabolism have emerged as critical in ALS etiology. These genes include TARDBP, FUS, and SETX (also known as Senataxin). The TARDBP gene encodes the TAR DNA-binding protein 43 (TDP-43), which is involved in the majority of sporadic ALS cases (Tziortzouda et al., 2021; ). The (GGGGCC)n repeat expansions (G4C2) in C9orf72 exert multifaceted effects on cell homeostasis, including disruption of nucleocytoplasmic transport, sequestration of RNA-binding proteins, and translation into DPRs that aggregate and contribute to neurotoxicity (; ). Beyond these genes, various other genetic polymorphisms have been linked to an increased susceptibility to ALS (Table 1).
TABLE 1
| Arrangement | Gene | Localization of chromosome | Proteins and their functions |
|---|---|---|---|
| ALS1 | SOD1 | 21q22.11 | SOD1: removal of free radicals from the cytoplasm |
| ALS2 | ALS2 | 2q33.2 | Alsine: situated on the cytosolic side of endosomes of neurons, with an unclear function |
| ALS3 | ALS3 | Unidentified function | |
| ALS4 | SETX | 9q32.13 | Senataxine: Domain for DNA/RNA helicase |
| ALS5 | SPG11 | 15q14 | Spatacsin: Sustaining cytoskeleton and regulating synaptic vesicular transport |
| ALS6 | FUS | 16p11.2 | FUS: Transcription, regulation of splicing, RNA biogenesis, and stress granules formation |
| ALS7 | ALS7 | 20p13 | Unidentified |
| ALS8 | VAPB | 20q13.33 | Vesicle-associated membrane protein-associated protein-B (VAPB): Regulates lipid metabolism; manages vesicular transport and the clearance of misfolded proteins (UPR pathway) |
| ALS9 | ANG | 14q11.1 | Angiogenine: trophic factors and angiogenic actors for motor neurons |
| ALS10 | TARDBP | 1p36.22 | TAR DNA binding protein (TDP-43): transcription, splicing, and mRNA transport |
| ALS11 | FIG4 | 6q21 | Polyphosphoinositide phosphatase regulates the cell concentration of PI (3,5) P2: This controls endoplasmic vesicle retrograde trafficking to the Golgi |
| ALS12 | OPTN | 10p13 | Optineurine: Membrane transport, cell morphogenesis, vesicular, and transcription activation |
| ALS13 | ATXN2 | 12q23-q24.1 | Ataxine-2: interaction with TDP-43 |
| ALS14 | VCP | 9p13 | Valosin-containing protein (VCP): ATP transfer via vesicles |
| ALS15 | UBQLN2 | Xp11.21 | Ubiquiline2: degradation of protein |
| ALS16 | SIGMAR1 | 9p13 | SIGMAR1 (Sigmanon-opioid intracellular receptor1): Neuro-protective membrane receptor |
| ALS17 | CHMP2B | 3p12.1 | Charged multi-vesicular body protein 2B: Multivesicular bodies (MVBs) are formed |
| ALS18 | PFN1 | 17p13.3 | Profiline1: conversion of filamentous actin-(F) from monomeric actin-(G) |
| ALS19 | ERBB4 | 2q33.3-q34 | Receptor tyrosine-protein kinase erbB-4: Transcription, cell proliferation, migration, differentiation, and apoptosis |
| ALS20 | HNRNPA1 | 2q13.1 | Heterogeneous nuclear ribonucleoprotein A1: Transport of mRNAs to the cytoplasm from the nucleus and splicing modulation |
| ALS21 | MATR3 | 5q31.2 | Matrin3: transcription, nuclear retention of defective RNAs, regulation of innate immunity |
| ALS-FTD2 | CHCHD10 | 22q11.23 | Coiled-coil-helix-coiled-coil-helix domain-containing protein 10: Preserves the organization and structural integrity of mitochondrial ridges |
| ALS | DCTN1 | 2p13 | Dynactine: the role of dynein in facilitating axonal retrograde transport |
| ALS-FTD1 | C9ORF72 | 9p21 | Guanine nucleotide exchange C9orf72: RNA binding and autophagy regulation |
Key genes associated with amyotrophic lateral sclerosis.
The FUS gene produces a protein that binds to both RNA and DNA, involved in transcriptional regulation, RNA splicing, and stress granule formation, all vital functions potentially linked to neuronal degeneration in ALS (). The mouse model that expresses the human FUS protein, similar to the one that expresses the TDP-43 protein, exhibits highly aggressive behavior and has a short lifespan (). The recent identification of a repeated pattern of GGGGCC expansion in a non-coding region of the C9ORF72 gene has led to its implication in ALS. This could be due to three processes: RNA-binding protein sequestration, dipeptide synthesis (repetition), or haplo-insufficiency (). Additionally, changes in the VAPB gene have been documented in ALS (). VAPB is involved in vesicle-mediated transport, facilitating the transfer of misfolded proteins during the unfolded protein response (UPR), as well as regulating lipid metabolism and shuttling lipids from the endoplasmic reticulum to other cellular organelles. A Brazilian family was found to carry the VAPB-P56S mutation that binds to the wild-type protein and disrupts its ability to activate the UPR pathway (). This dominant-negative effect impairs ER stress responses, contributing to neuronal vulnerability. Additionally, reduced expression of VAPB has been observed in the spinal cords of ALS patients (; ). Other genes involved include CHMP2B, OPTN, DCTN1, ANG, ATXN2, UBQLN2, PFN1, and SQSTM1 (Table 1).
Extensive research has established that the pathogenesis of ALS arises from a multifactorial interplay of molecular and systemic mechanisms (Taylor et al., 2016; ) (Figure 1). These include genetic mutations driving RNA misregulation and protein misfolding (e.g., TDP-43, SOD1 aggregates), mitochondrial dysfunction with reactive oxygen species (ROS) overproduction, and impaired autophagy-lysosomal clearance (). Neuroinflammation, mediated by microglial activation and cytokine release, synergizes with these processes to exacerbate neuronal damage. Mitochondrial dysfunction arising from impaired axonal transport deprives motor neurons of ATP, exacerbating ROS accumulation and energy deficits in degenerating axons (). Concurrently, gut dysbiosis disrupts microbial metabolite production (e.g., short-chain fatty acids), which compromises intestinal barrier integrity and promotes systemic inflammation via gut-derived endotoxin leakage into circulation (). This systemic inflammation exacerbates neuroinflammation through vagus nerve signaling and blood-brain barrier disruption (). While mechanistically distinct, these pathways converge to amplify oxidative stress and inflammatory cascades, creating a self-reinforcing cycle of neurodegeneration. Together, these findings highlight the genetic and mechanistic heterogeneity of ALS.
FIGURE 1
The table summarizes major ALS-linked genes and their chromosomal localizations, as curated from the ALS Online Database (http://alsod.iop.kcl.ac.uk/). The associated proteins and their functional roles in cellular processes relevant to ALS pathophysiology are also listed. UPR: Unfolded Protein Response.
4 Biomarkers of ALS
Biomarkers are quantifiable indicators that reflect normal biological functions, the presence of a disease, or the pharmacological response to therapeutic interventions (
4.1 Body fluid-based biomarkers
Biomarkers derived from body fluids provide valuable insights into diagnostic, prognostic, and therapeutic responses for ALS (
TABLE 2
| Sources | Obstacles to sample collection and analysis | Biological targets and analytes |
|---|---|---|
| CSF | Invasive sampling, especially challenging in advanced-stage patients | • Proteins • Mononuclear cells • Small molecules • microRNAs • Antibodies |
| Urine | Urine concentration and urinary tract infections | • Small molecules |
| Blood | High protein content interfering with analyte detection (e.g., albumin, immunoglobulins) | • Proteins • Mononuclear cells • Small molecules • microRNAs • Antibodies |
| Expression of TDP-43 in hiPSCs (human induced pluripotent stem cells) | Low abundance of cryptic peptides in biofluids and technical challenges in mass spectrometry detection | Cryptic peptides |
Detectable fluid biomarkers of ALS in different sources and their detection mode.
Among the 15 differentially expressed CSF proteins, several have functional relevance to synaptic integrity, axonal structure, and neuronal stress responses (
4.2 Neurofilaments
The interplay between neuroinflammatory and proteostatic biomarkers and NfL levels highlights the multifactorial nature of neurofilament release, positioning NfL as a downstream integrator of diverse pathological processes in ALS (
A more nuanced and complex biological phenomenon may underlie the observed neurofilament dynamics in ALS. The humoral immune response, which facilitates the clearance of antigens from circulation to reduce their immune detection, could affect the detectability of neurofilament isoforms in biofluids. Additionally, factors such as body mass index (BMI) have been implicated in modulating neurofilament (
Phosphorylation of the NfH increases its stability and solubility, impacting its accumulation in axons and detectability in biofluids (Zecca et al., 2022). This modification reflects axonal stress and degeneration, making pNfH a promising candidate for tracking disease progression (
TABLE 3
| Biofluid | Methodology | Patient’s cohort | Key findings | References |
|---|---|---|---|---|
| CSF | ELISA | 80 ALS 46 ALS mimics 43 HC | The levels of CSF neurofilament light chain are higher in individuals with ALS than in those with similar conditions and healthy controls | |
| Blood | Simoa | 229 ALS 20 PLS 11 progressive muscular atrophy | Baseline serum NfL predicts ALSFRS-R slope. pNfH may serve as a pharmacodynamic biomarker. | |
| Blood | ELISA | 382 ALS | Serum NfL concentrations are elevated in women and show a weak correlation with disease progression; higher serum NfL levels are associated with reduced survival | |
| Blood | Simoa | 100 ALS | Serum NfL exhibits a positive correlation with the progression rate. Rapid progressors demonstrate increased median concentrations of NfL and prognostic biomarkers | |
| Blood | ELISA | 221 MND | Serum pNfH serves as a negative prognostic indicator for survival. Patients with C9orf72-related motor neuron disease exhibit elevated serum pNfH levels compared to those without C9orf72 mutations | |
| Blood CSF | NfL: confirmed ELISA pNfH: in-house-developed ELISA Simoa | 234 ALS 44 ALS mimics 9 controls | CSF NfL and pNfH concentrations are markedly elevated in ALS patients and have a negative correlation with survival. Plasma NfL levels are markedly elevated in ALS patients compared to controls | |
| Blood CSF | MesoScale Discovery’s R-PLEX Human Neurofilament L Antibody Set | 20 ALS 17 IPN | CSF NfL serves as the most reliable indicator of ALS severity. The combination of CSF NfL, CSF ICAM-1, and serum IFN-gamma enhances diagnostic efficacy | |
| CSF | Uman Diagnostics’ sandwich enzyme-linked immunoassay | 150 ALS 108 HC 28 ALS mimics | CSF NfL demonstrates superior performance compared to hs-cTnT as both a diagnosis and prognostic biomarker | |
| Blood | Simoa | 60 ALS mimics 171 ALS | Plasma and CSF neurofilament light chain levels are significantly elevated in ALS patients compared to mimics, correlate with disease progression and survival, and show stable plasma levels over time | Vacchiano et al. (2021) |
| Blood | The R-PLEX electrochemiluminescence platform for Meso Scale Discovery | 258 ALS 101 HC 80 OND | Plasma NfL correlates with survival outcomes | Thompson et al. (2022) |
| Blood | Simoa SR-X platform | 209 ALS 46 NHC | Serum NfL levels effectively distinguish ALS from NHC, exhibit higher concentrations in females, and correlate with the extent of upper and lower motor neuron involvement. A negative correlation exists between serum NfL and eGFR. | Verde et al. (2023) |
An overview of neurofilament research and its key findings since 2019.
4.3 Cryptic exons and transcriptomics
Cryptic exon inclusion has emerged as a hallmark of ALS, particularly through the mislocalization of TDP-43, a nuclear RNA-binding protein essential for splicing regulation (
FIGURE 2

Mechanisms of cryptic exon inclusion in ALS and detection of associated biomarkers. TDP-43 mislocalization disrupts RNA splicing, leading to the incorporation of cryptic exons into transcripts of genes such as UNC13A and STMN2. These aberrantly spliced mRNAs produce truncated proteins with cryptic peptides derived from intronic sequences. Detection of these peptides in biofluids (e.g., CSF, serum) via mass spectrometry offers a novel biomarker strategy for ALS diagnosis and monitoring therapeutic interventions targeting RNA processing in ALS. This schematic integrates both experimentally validated pathways and emerging mechanisms currently under validation in ALS cohorts.
Consequently, cryptic exon incorporation may provide a range of disease-specific indicators and signal a significant step in the early clinical progression of ALS. Cryptic peptide detection has relied heavily on RNA studies in ALS brain tissue and TDP-43 pathology models in cell lines. Recent efforts to detect cryptic peptides in biofluids, such as UNC13A-derived peptides in CSF and serum, utilize mass spectrometry with immunoprecipitation enrichment (
4.4 The immunological response biomarkers
Immune dysregulation is increasingly recognized as a contributing factor in the pathogenesis of ALS, and several biomarkers reflecting immune alterations are under active investigation (
4.5 Functional and metabolic imaging-based markers
Functional and metabolic imaging techniques have become pivotal in detecting early pathophysiological alterations and tracking disease progression in ALS (van den Bos et al., 2019). Resting-state functional MRI studies suggest a gradual decline in connectivity among different brain regions as ALS progresses. In contrast, task-based imaging shows the engagement of atypical brain areas during task execution, likely reflecting compensatory mechanisms. With the development of extra-motor imaging and whole-brain multi-voxel techniques, metabolic imaging methods, such as magnetic resonance (MR) spectroscopy, have also advanced significantly, complementing structural protocols (
Symptomatic and presymptomatic cohorts have extensively utilized PET imaging to detect early metabolic changes. The creation of specific tracers for astrogliosis and neuroinflammation 103 has demonstrated the use of PET in assessing treatment-related cellular responses (
4.6 Neuroinflammation-related biomarkers
Neuroinflammation has been recognized as a key feature of ALS pathology, although its role, whether as a consequence of neurodegeneration or as a contributing factor to neuronal loss, remains unresolved (Zhang et al., 2023). In the early stages of ALS, neuroinflammation may help prevent the brain from becoming excessively inflamed and disrupting homeostasis. Immune cells infiltrating from the periphery and reactive microglia in the central nervous system are hallmarks of this phase. Neuroprotective microglia cells become active, anti-inflammatory cytokines are upregulated, and regulatory T cells are enhanced. Activation of neurotoxic microglial cells follows, accompanied by an increase in cytokines and effector T cells, resulting in a proinflammatory response. Although not specific to ALS, these inflammatory markers may support patient stratification, predicting disease progression, and monitoring pharmacodynamic responses in therapeutic trials (
Another protein associated with neuroinflammation, particularly astrogliosis, which is seen in ALS patients, is glial fibrillary acidic protein (GFAP) (Verde et al., 2023). The astrocyte cytoskeletal protein with the highest abundance is GFAP. So far, reports on its efficacy as a biomarker have been mixed. Some research has shown a correlation between GFAP levels and the length of time a patient has had ALS or another neurological disorder (
5 Therapeutic implications and future directions
Current ALS therapies, including riluzole, edaravone, and AMX0035, provide modest survival or functional benefits (
Metabolic interventions are also under investigation, including creatine supplementation, NAD + precursors, and agents modulating mitochondrial dysfunction (
Initiatives like PRECISION ALS, the ALS CARE Database and the ENCALS (European Network for the Cure of ALS) consortium underscore the importance of large-scale biomarker datasets (
6 Conclusions and prospects
Despite recent advances in identifying numerous candidate biomarkers, none have yet been adopted into standard clinical practice. This reflects the broader understanding that ALS is a heterogeneous disorder, clinically, genetically, and pathophysiologically, making it improbable for any single biomarker to represent the entire disease landscape. Biomarker research has flourished over the past decade, but validation in more extensive clinical datasets, incorporating patient-reported outcomes, remains essential. Detailed clinical phenotyping has brought us closer to elucidate prognostic features, enabling accurate assessment of survival at the group level. Standardized neuropsychological assessments have enabled classification of patients according to whether they exhibit progressive cognitive decline. Concomitantly, genomic studies have begun to characterize disease subtypes by molecular pathway. Still, the earliest diagnosis is a significant problem, often being delayed by approximately 15 months. Despite the limited number of tools for tracking disease progression, scales like ALSFRS-R continue to be crucial for evaluating both early and advanced stages of ALS. The next few years are likely to amplify the paramount importance of understanding ALS variability and, in turn, the biology that underlies it (or vice versa). This will most likely include a combination of imaging, fluid-based, and neurophysiological biomarkers. New approaches, such as quantitative EEG, imaging data, and biomarkers derived from cryptic splicing, may improve diagnostic specificity, especially during the presymptomatic stage. The potential for fluid-based markers, such as NfL, in conjunction with advanced neuroimaging and genomic profiling, to facilitate smaller, more focused populations and shorter trial durations could be a game-changer. Additionally, ALS-directed gene product measurements offer pharmacodynamic insights into target engagement within this complex background. Translating these biomarkers into clinical practice will also require standardized assays, regulatory approvals, and infrastructure for routine biomarker testing across healthcare settings. Validated biomarkers could transform ALS research into a precision medicine-driven field, enabling earlier interventions and personalized care. Such a precision approach promises earlier intervention, streamlined trials, and personalized ALS care.
Statements
Author contributions
FA: Project administration, Visualization, Writing – original draft, Methodology, Investigation, Conceptualization. MB: Writing – original draft, Investigation, Project administration, Software, Methodology, Resources. AA: Investigation, Visualization, Writing – review and editing, Validation, Methodology, Project administration. TM: Writing – original draft, Conceptualization, Methodology, Project administration, Resources, Software. AS: Investigation, Resources, Writing – review and editing, Conceptualization, Project administration, Data curation. MH: Writing – review and editing, Project administration, Funding acquisition, Conceptualization.
Funding
The author(s) declare that financial support was received for the research and/or publication of this article. The authors extend their appreciation to the King Salman Center for Disability Research for funding this work through Research Group No. KSRG-2024-446. AS thanks Ajman University for covering the APC.
Conflict of interest
The authors declare that the research was conducted in the absence of any commercial or financial relationships that could be construed as a potential conflict of interest.
The author(s) declared that they were an editorial board member of Frontiers, at the time of submission. This had no impact on the peer review process and the final decision.
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Summary
Keywords
amyotrophic lateral sclerosis, molecular basis of neurodegeneration, biomarkers, neuroinflammation markers, therapeutic targets
Citation
Anjum F, Bakhuraysah M, Alsharif A, Mohammad T, Shamsi A and Hassan MI (2025) Emerging biomarkers in amyotrophic lateral sclerosis: from pathogenesis to clinical applications. Front. Mol. Biosci. 12:1608853. doi: 10.3389/fmolb.2025.1608853
Received
09 April 2025
Accepted
10 June 2025
Published
30 June 2025
Volume
12 - 2025
Edited by
Ashok Kumar, All India Institute of Medical Sciences, Bhopal, India
Reviewed by
Larance Ronsard, Ragon Institute, United States
Davide Mariani, Sapienza University of Rome, Italy
Rajesh Sinha, University of Alabama at Birmingham, United States
Tooba N. Shamsi, University of Alberta, Canada
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© 2025 Anjum, Bakhuraysah, Alsharif, Mohammad, Shamsi and Hassan.
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
*Correspondence: Farah Anjum, farahanjum@tu.edu.sa; Anas Shamsi, m.shamsi@ajman.ac.ae, anas.shamsi18@gmail.com; Md. Imtaiyaz Hassan, mihassan@jmi.ac.in
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